Csor.00g212260 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g212260
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	BEST Arabidopsis thaliana protein match is: reduced male fertility .
Location	Csor_Chr17: 5291535 .. 5295516 (+)
RNA-Seq Expression	Csor.00g212260
Synteny	Csor.00g212260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAAGAAACTGAGCATTGCCTCTGCGCGAGATCGAGTGGTTACGAGATCTCAATCCATTGCCATGGAGCGTGAGAAAATATCATCATCGCCAAATCCAGTTGTTGCTGTAGAGCCGGAAGGAATGGTAAAGCGAATGCGAAGAGATATTAAGCCGATTCATTCTTGCAGCTCTCCTCGTTCCACTTTTCTTACTGCTCATTCTTCTGCTTCATCCTCTGCATCTTCGTCTGCCTGCTGGTTCGTTCTCTTCCTCTTTCTGTCTCCATCCTGATAGACGCTGTTCGTAGGTAATTTCAGTTCTGATACGAGTTTCGCGCGTAGAAATGTGTCTGCCTGTGGAGGTGAATGCCTATGTGTTTTTTAGCATCGTGATAGTGAAGAAATTCAAATTTTATTTTCTAGAAGTGATTTGAATATCTTAGTTCAGAAATTGAAATGTGAAGTTATTTCCCGACTTTTAGACTCTTTGAGCTAGATTGTAAAGTTGCATTAGTTTAGTACTGCCAAGGACTTGGAAGTAGTAAGAAATAAACAATCTGAGTTGTTTCTGTAAGATTCCGAAGCTCAAAGTGAACGTCTGCAGAGTTAAATCTACGCAGCATAAACTTGTTCGTTTTCTCCATCGGGAGAAAACGATGGAGAAGAAACGTTTATTCTTGTGATTTTCGAATTTTCAGACTGAATGTGACAATCTTTGTTGGAAACCACTACGCGTTGATGAACACTTTCTGGAGCTCTATAAAGTTAATCGCAAGTACGGTTCGTAATATAAGTAGGGTGCCAAATCTTCAGTATAGTTTGAAGTGATTATTTGTCACAAGGATCGAAGCAGATACAGGACTTACATTTTTTACTTTTTTATCTAAATACTTTCTGGAGCTCTATCTAAAGCTTGTTCAACACTAACATACTTTTTTATCACATAAAGTATTCCGAGTCTCCTAGTTTTCTTCTTAACTTCATCTTTTACTTTTCTAGGTATTGGTTCTTGGTTCTACTTATAAGATTTCAAACGTGATTGTTCTATCTTTTTACATATTCAATTTTACACCAGTTATTATTTCAGTTTTAAGTAATCAAAAGTTCATTTGTTATTTACCATTAGTCTGGCTTAAGTTTGGTAGATCGGGAATAAGATTGATGAATCACGTGAATTAGAAATTGTTTCCATCAGTTTGAATATTTCATCGGAAACAGAGCTAAGGATTAATATGTAATTTAACCTTCCGTATGACGATTTCCGCGAATGAACATGAAAGGTATGACGCGGACGTGTGGACAGAGGTGGCGAAGTTTCTGGATGGAAGATCTTTGATGATGCTTGCGGCGACTAGCCGGTGGTTTTACCGTTTAGTCATGGAAGACAGCATATGGAAGTATGTTTGCCTGCGTGATCTTCAGGTCCCTGCTCCTCAACACACGGCCTTCAAATGGATCAAGCTCTACGTTTCTGCCTTCGGTAAGGATCGGACTCGAGTTCTGTGAGTTCTGTATTCCTGCTCTGGTCAATACGTATTGCGTTTGCTTAACTATTCATTGATCTCTGTTCCAGATGGAAGTCACTCCTACATTTTCCGGCAGCAGGAGAAACATCTCGGTGAGTGATTGTGATTCCACTCGACTCCTGTAAATAATTAGGCGCGGATTGTACTTAAAACTAAAACTATATGTCAAGGACCTGCTTAGCCACGGGTTGTCTAATCTTATCATCACATCTCACATAATAACTAGATATTCAAGCTTTATTCAACCATAACTATAAGTCATTATAGAGGGTGGAGGTAGTATAAACCTACTATCTCGAGATTCCAAGGAATAAACTCCCAAAGCAACTGTACTGCTACTTTCCATCATGTATAAAATAGACATTTAGTGATCCTGATTCCAATATACTAATTGAACTGTAGTTTGCTTCTTTACCACATTGTTTATTATTTATTTATTTATTTTGAATGAAATCAGATTGGATGCGGATTGGGGCTTTTTTCATGGATTCTTCCGTAGTACTCCTATCAGAAAGGCTGGGCTCTCAAGTGAAAATCCCAAAACAGGATTCAATGGATAATACATTGGAGTCCGGTTGTTGTATCTTGCGCAATGTTAAAACTGGGATCTGGATAGCCGGTATCAAGCTTGCTAAATGTTTTTATCATTTTCTTTCGATGGTTGTCATAACTTGATACTCTATTAACCTTTTCTTAAGTGAATTATATTCTAAATGGACTAATGTGACAGATCTACAACTTGTTCGTTGTCCAGTTTGCGACCTGAATACATGTGATGGTAGGTATCCCTAGTAAACATTCTGTATCCCACTAAAATGTAGGAACCTCCTTTTATTTCGATTGTTGCAAGATCTTAGCCTGCAGTTGTATCATTTTGGTAATTGGTATGCCATACTGTGTTTAAAAATATTGGGGAATTCATAGGCTTATTTTCTTCCGAATTTCATTGAAAATTAGTTTAATCTTGTTTCCAATACCTTAGGAAAGTGGAAGATACTGAGAGCACATACTCTAATCAGCTGCTAATCAACCTTCGTTCAGTTTTTTTAGTAAGCGTTTTAACACATCCAAACACAAATTCATTCTACACGCATCGTCCAGAACCCAACCTGAAAATAGAATTTGTATTTCAAAATTGTAAGCAGTGGATGTATAGCTTCAGAAAGTTATCTACAATTTATTGGCTTTTGCTGATCTTGCTACTACTATTATGTAGGAACAATGCAAACGTTGGATGCCAGGCACATAGAGCTGTTCCTGAACGAAGGTTACCAAGATGGTAGTTGGGAATATCAGATTTTAGGTTCTCATGATATCAGGAAGCCTACAGAGTCAGCTTCAGGGGCCATTTTTGATGTAAAGCATCTGAAAGACTCTTCAACCTCAGGTATAGCACAGTCTTTCTATACTGAAATATTACTGTCTTATTATTATTGCTAGGTGCTTCTGAAAATGATTCCTGTAACATCTTTCCTACTCTAAGTTTAATTATTTAAGATCTGTCCAGGAAAAGTAATTTTAATATACTAGATTACACGTGAAATTCTTGAATTATTTATCCTTTTTGAAGAAAGTACTGCGCACTGCGCACTTTCAGCTGCAAATTATATGCCATGGAAGGAATGCTCTTTTTCTTTCTTTATCTAAAAATTATAATCGTATAGTGCAACTTGTTTCAGCATTTGCTTAGAAGATACTAAATTTCTATATTTAGCTAAGCCTAATGATTTAACATGTTGCAAATACAACACAAGATCTGAGTTCAAATTATTGCAACATCCGTTAAGTTTGTAGACGTTGAATGTTGTTATATTACATACTTCTACGTCCAGAAAATATTGAGTTACTTAAGGAGATTCAATTATGAAAATTTATGGTGAAATTTGTCCCAAATGAATTGACAGGAATATTGGATCTAAAGTCATGGACAGGCAGTCGAACTGATTGGCAGCCAAAGGCAATGATTACTCTCAACGCAGTTGCCGTAAATACCTATTTACAAGACAATGAAGGTAAATCGCCTTCAGTTTTATATGATATTCAAATCGGTGAGAAGTACTTTTCATTGTTTAAAAATAATTTTCTAGAATTTTCAGTCTTTAGTCGACTCGATAGAAAAACCTTCACAAGTATTTTTTTTAACAATCATCTTGGTTAAAAGCACTTACAAATACTTTCTCACGAACCACTTAAATCCTTTTTACTTTTTTGAAAAAACACGTAGATCACCTCGAAATGGTGAGCTTCAATCGAAAGAGAAAAGTACTTTTAATCGATATGAAAAAAAATTGTGCACAACTAACTTGTCAATGCCTCCCGTAGTTGGTAACATTGGCGTAGTCTAGTGTTTGATTGAGATTGAGGTGTGATTTTGTAATGACGCATGCAGGAGTTCACGTGAAATACCAGGCCATGAAAGCCGGAGCGAACGGAGAGGTGGTTTCTATCAGAATCTCTCAGCAGCTACTTTAG

mRNA sequence

ATGGGGAAGAAACTGAGCATTGCCTCTGCGCGAGATCGAGTGGTTACGAGATCTCAATCCATTGCCATGGAGCGTGAGAAAATATCATCATCGCCAAATCCAGTTGTTGCTGTAGAGCCGGAAGGAATGGTAAAGCGAATGCGAAGAGATATTAAGCCGATTCATTCTTGCAGCTCTCCTCGTTCCACTTTTCTTACTGCTCATTCTTCTGCTTCATCCTCTGCATCTTCGTCTGCCTGCTGGTATGACGCGGACGTGTGGACAGAGGTGGCGAAGTTTCTGGATGGAAGATCTTTGATGATGCTTGCGGCGACTAGCCGGTGGTTTTACCGTTTAGTCATGGAAGACAGCATATGGAAGTATGTTTGCCTGCGTGATCTTCAGGTCCCTGCTCCTCAACACACGGCCTTCAAATGGATCAAGCTCTACGTTTCTGCCTTCGATGGAAGTCACTCCTACATTTTCCGGCAGCAGGAGAAACATCTCGATTGGATGCGGATTGGGGCTTTTTTCATGGATTCTTCCGTAGTACTCCTATCAGAAAGGCTGGGCTCTCAAGTGAAAATCCCAAAACAGGATTCAATGGATAATACATTGGAGTCCGGTTGTTGTATCTTGCGCAATGTTAAAACTGGGATCTGGATAGCCGGAACAATGCAAACGTTGGATGCCAGGCACATAGAGCTGTTCCTGAACGAAGGTTACCAAGATGGTAGTTGGGAATATCAGATTTTAGGTTCTCATGATATCAGGAAGCCTACAGAGTCAGCTTCAGGGGCCATTTTTGATGTAAAGCATCTGAAAGACTCTTCAACCTCAGGAATATTGGATCTAAAGTCATGGACAGGCAGTCGAACTGATTGGCAGCCAAAGGCAATGATTACTCTCAACGCAGTTGCCGTAAATACCTATTTACAAGACAATGAAGGAGTTCACGTGAAATACCAGGCCATGAAAGCCGGAGCGAACGGAGAGGTGGTTTCTATCAGAATCTCTCAGCAGCTACTTTAG

Coding sequence (CDS)

ATGGGGAAGAAACTGAGCATTGCCTCTGCGCGAGATCGAGTGGTTACGAGATCTCAATCCATTGCCATGGAGCGTGAGAAAATATCATCATCGCCAAATCCAGTTGTTGCTGTAGAGCCGGAAGGAATGGTAAAGCGAATGCGAAGAGATATTAAGCCGATTCATTCTTGCAGCTCTCCTCGTTCCACTTTTCTTACTGCTCATTCTTCTGCTTCATCCTCTGCATCTTCGTCTGCCTGCTGGTATGACGCGGACGTGTGGACAGAGGTGGCGAAGTTTCTGGATGGAAGATCTTTGATGATGCTTGCGGCGACTAGCCGGTGGTTTTACCGTTTAGTCATGGAAGACAGCATATGGAAGTATGTTTGCCTGCGTGATCTTCAGGTCCCTGCTCCTCAACACACGGCCTTCAAATGGATCAAGCTCTACGTTTCTGCCTTCGATGGAAGTCACTCCTACATTTTCCGGCAGCAGGAGAAACATCTCGATTGGATGCGGATTGGGGCTTTTTTCATGGATTCTTCCGTAGTACTCCTATCAGAAAGGCTGGGCTCTCAAGTGAAAATCCCAAAACAGGATTCAATGGATAATACATTGGAGTCCGGTTGTTGTATCTTGCGCAATGTTAAAACTGGGATCTGGATAGCCGGAACAATGCAAACGTTGGATGCCAGGCACATAGAGCTGTTCCTGAACGAAGGTTACCAAGATGGTAGTTGGGAATATCAGATTTTAGGTTCTCATGATATCAGGAAGCCTACAGAGTCAGCTTCAGGGGCCATTTTTGATGTAAAGCATCTGAAAGACTCTTCAACCTCAGGAATATTGGATCTAAAGTCATGGACAGGCAGTCGAACTGATTGGCAGCCAAAGGCAATGATTACTCTCAACGCAGTTGCCGTAAATACCTATTTACAAGACAATGAAGGAGTTCACGTGAAATACCAGGCCATGAAAGCCGGAGCGAACGGAGAGGTGGTTTCTATCAGAATCTCTCAGCAGCTACTTTAG

Protein sequence

MGKKLSIASARDRVVTRSQSIAMEREKISSSPNPVVAVEPEGMVKRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSMDNTLESGCCILRNVKTGIWIAGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL

Homology

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BLAST of Csor.00g212260 vs. ExPASy Swiss-Prot
Match: Q9M365 (Probable F-box protein At3g61730 OS=Arabidopsis thaliana OX=3702 GN=RMF PE=1 SV=2)

HSP 1 Score: 349.4 bits (895), Expect = 4.6e-95
Identity = 172/343 (50.15%), Postives = 239/343 (69.68%), Query Frame = 0


Query: 11  RDRVVTRSQSIAMEREKISSSPNPVVAVEPEGMVKRMRRDIKPIHSCSSPRSTFLTAHSS 70
           R  V +  Q   ++RE+   +   +V    +   ++  + ++ I  C SPR +  T  S 
Sbjct: 29  RKLVQSNEQKNDIQREEDGRAKRRIV----QSSDQKNGKILRGIRGCVSPRCSAQTYQSR 88

Query: 71  ASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVP 130
            S        WY+ D+WT +++FLDG+SL+ L AT++WFY++ MED++W++ CLRDLQVP
Sbjct: 89  FS--------WYEQDIWTYISRFLDGKSLVKLGATNKWFYKIAMEDTVWRFACLRDLQVP 148

Query: 131 APQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIP 190
            P   +  WIK+Y SAFDGSHSY+FRQ+EKH+DWMRIGAF +DS   LL+E L  ++K P
Sbjct: 149 VPFPVSSTWIKIYASAFDGSHSYLFRQKEKHIDWMRIGAFVLDSRTSLLTESLSGRLKFP 208

Query: 191 KQDSMDNTLE-SGCCILRNVKTGIWIA----------------GTMQTLDARHIELFLNE 250
           ++ +++  L+ SG C++ ++K+GIWIA                GTMQTLDARHIELFL+E
Sbjct: 209 REGTIERMLQSSGSCLINDIKSGIWIADLQLVRCPVCDLSTCDGTMQTLDARHIELFLSE 268

Query: 251 GYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAM 310
           GY+DGSW+Y ++GSH ++K   +A GAIFD+KHLK+SS SGIL+LKSWTG   D QPKA+
Sbjct: 269 GYKDGSWDYNLIGSHKLQKNASAACGAIFDLKHLKESSYSGILNLKSWTGESNDSQPKAV 328

Query: 311 ITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 337
           I  +AVAV+T LQ+NEG+ VKY  MKAG +G++VSIRISQQLL
Sbjct: 329 IAPHAVAVHTRLQENEGILVKYHTMKAGTDGDIVSIRISQQLL 359

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BLAST of Csor.00g212260 vs. ExPASy Swiss-Prot
Match: Q9FGB8 (Probable F-box protein At5g36000 OS=Arabidopsis thaliana OX=3702 GN=At5g36000 PE=2 SV=2)

HSP 1 Score: 342.4 bits (877), Expect = 5.7e-93
Identity = 162/303 (53.47%), Postives = 217/303 (71.62%), Query Frame = 0


Query: 51  IKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFY 110
           ++ IH C SPR +  T  S  S        WY+ D+WT + +FLDG+SL+ L AT++WFY
Sbjct: 61  LRGIHGCVSPRCSAPTYQSRFS--------WYEQDIWTYITRFLDGKSLVKLGATNKWFY 120

Query: 111 RLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAF 170
           ++ MED++W++ CLRDLQVP     +  WIK+Y SAFDGSHSY+F Q+EKH+DWMR+GAF
Sbjct: 121 KIAMEDTVWRFACLRDLQVPETFPVSSTWIKIYASAFDGSHSYLFHQKEKHIDWMRLGAF 180

Query: 171 FMDSSVVLLSERLGSQVKIPKQDSMDNTLE-SGCCILRNVKTGIWIA------------- 230
            +DS    L+E L  ++K+P + +++  L+ SG C++ ++K+GIWIA             
Sbjct: 181 VLDSRTSFLTESLSGRLKVPTEGTIEQMLQSSGSCLINDIKSGIWIADLQLLRCPLCDLS 240

Query: 231 ---GTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTS 290
              GTMQTLD RHIELFL+EGY+DGSW+Y ++GSH + K   +A GAIFD+KHLK SS+S
Sbjct: 241 TCDGTMQTLDVRHIELFLSEGYKDGSWDYNLIGSHKLEKDASAACGAIFDLKHLKKSSSS 300

Query: 291 GILDLKSWTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQ 337
           GIL+LKSWTG   D QPKA+I  +AVAV+T LQ NEG+ VKY  MKAG +G++VSIRISQ
Sbjct: 301 GILNLKSWTGEADDSQPKAVIAPHAVAVHTRLQQNEGILVKYHTMKAGTDGDIVSIRISQ 355

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BLAST of Csor.00g212260 vs. NCBI nr
Match: KAG6575300.1 (putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 669 bits (1726), Expect = 1.84e-242
Identity = 336/336 (100.00%), Postives = 336/336 (100.00%), Query Frame = 0


Query: 1   MGKKLSIASARDRVVTRSQSIAMEREKISSSPNPVVAVEPEGMVKRMRRDIKPIHSCSSP 60
           MGKKLSIASARDRVVTRSQSIAMEREKISSSPNPVVAVEPEGMVKRMRRDIKPIHSCSSP
Sbjct: 1   MGKKLSIASARDRVVTRSQSIAMEREKISSSPNPVVAVEPEGMVKRMRRDIKPIHSCSSP 60

Query: 61  RSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWK 120
           RSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWK
Sbjct: 61  RSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWK 120

Query: 121 YVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLS 180
           YVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLS
Sbjct: 121 YVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLS 180

Query: 181 ERLGSQVKIPKQDSMDNTLESGCCILRNVKTGIWIAGTMQTLDARHIELFLNEGYQDGSW 240
           ERLGSQVKIPKQDSMDNTLESGCCILRNVKTGIWIAGTMQTLDARHIELFLNEGYQDGSW
Sbjct: 181 ERLGSQVKIPKQDSMDNTLESGCCILRNVKTGIWIAGTMQTLDARHIELFLNEGYQDGSW 240

Query: 241 EYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAMITLNAVA 300
           EYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAMITLNAVA
Sbjct: 241 EYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAMITLNAVA 300

Query: 301 VNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 336
           VNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL
Sbjct: 301 VNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 336

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BLAST of Csor.00g212260 vs. NCBI nr
Match: XP_023548391.1 (probable F-box protein At3g61730 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 654 bits (1687), Expect = 2.95e-236
Identity = 333/352 (94.60%), Postives = 334/352 (94.89%), Query Frame = 0


Query: 1   MGKKLSIASARDRVVTRSQSIAMEREKISSSPNPVVAVEPEGMVKRMRRDIKPIHSCSSP 60
           MGKKLSIASARDRVVTRSQSIAMEREKISSSPNPVVAVEPEGMVKRMRRDIKPIHSCSSP
Sbjct: 1   MGKKLSIASARDRVVTRSQSIAMEREKISSSPNPVVAVEPEGMVKRMRRDIKPIHSCSSP 60

Query: 61  RSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWK 120
           RSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWK
Sbjct: 61  RSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWK 120

Query: 121 YVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLS 180
           YVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLS
Sbjct: 121 YVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLS 180

Query: 181 ERLGSQVKIPKQDSMDNTLESGCCILRNVKTGIWIA----------------GTMQTLDA 240
           ERLGSQVKIPKQDS DNTLESGCC+L NVKTGIWIA                GTMQTLDA
Sbjct: 181 ERLGSQVKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDA 240

Query: 241 RHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGS 300
           RHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGS
Sbjct: 241 RHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGS 300

Query: 301 RTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 336
           RTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL
Sbjct: 301 RTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 352

[Close]

BLAST of Csor.00g212260 vs. NCBI nr
Match: XP_038875515.1 (probable F-box protein At3g61730 [Benincasa hispida])

HSP 1 Score: 625 bits (1613), Expect = 6.02e-225
Identity = 320/354 (90.40%), Postives = 326/354 (92.09%), Query Frame = 0


Query: 1   MGKKLSIASARDRVVTRSQSIAMEREKIS--SSPNPVVAVEPEGMVKRMRRDIKPIHSCS 60
           MGKKLSIASARDRVVTRS SIAMER K+S  SSPN VVA EPEG VKRMRRDIKPIHSCS
Sbjct: 1   MGKKLSIASARDRVVTRSLSIAMERAKMSKRSSPNSVVAAEPEGTVKRMRRDIKPIHSCS 60

Query: 61  SPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSI 120
           SPRS FLTAHSSASSSASSS+CWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSI
Sbjct: 61  SPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSI 120

Query: 121 WKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVL 180
           WKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFF+DSSV L
Sbjct: 121 WKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVAL 180

Query: 181 LSERLGSQVKIPKQDSMDNTLESGCCILRNVKTGIWIA----------------GTMQTL 240
           LSERLGSQ+KIPKQDS D TLESGCC+L NVKTGIWIA                GTMQTL
Sbjct: 181 LSERLGSQMKIPKQDSTDKTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTL 240

Query: 241 DARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWT 300
           DARHIELFLNEGYQDGSWEYQI+GSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWT
Sbjct: 241 DARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWT 300

Query: 301 GSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 336
           GSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL
Sbjct: 301 GSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 354

[Close]

BLAST of Csor.00g212260 vs. NCBI nr
Match: XP_004140675.1 (probable F-box protein At3g61730 [Cucumis sativus] >KGN46347.1 hypothetical protein Csa_005078 [Cucumis sativus])

HSP 1 Score: 620 bits (1599), Expect = 8.49e-223
Identity = 315/355 (88.73%), Postives = 326/355 (91.83%), Query Frame = 0


Query: 1   MGKKLSIASARDRVVTRSQSIAMEREKI---SSSPNPVVAVEPEGMVKRMRRDIKPIHSC 60
           MGKKLSIASARDRVVTRSQSI+MER K+   SS  NPVVA EPEGMVKRMRRDIKPIHSC
Sbjct: 1   MGKKLSIASARDRVVTRSQSISMERAKMTKRSSPKNPVVAAEPEGMVKRMRRDIKPIHSC 60

Query: 61  SSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDS 120
           SSPRS FLTAHSSASSSASSS+CWYDADVWTEVAKFLDGRSLMMLAATSRWFYR VMEDS
Sbjct: 61  SSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRSVMEDS 120

Query: 121 IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVV 180
           IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFF+DSSV 
Sbjct: 121 IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSVA 180

Query: 181 LLSERLGSQVKIPKQDSMDNTLESGCCILRNVKTGIWIA----------------GTMQT 240
           LLSERLGSQ+KIPKQDS DNTLESGCC+L NVKTGIWIA                GTMQT
Sbjct: 181 LLSERLGSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQT 240

Query: 241 LDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSW 300
           LDARHIELFLNEGYQDGSWEYQI+GSHDIRKPTESASGAIFDVKHL+DSSTSG+LDLKSW
Sbjct: 241 LDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGLLDLKSW 300

Query: 301 TGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 336
           TG+RTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAM+AGANGEVVSIRISQQLL
Sbjct: 301 TGNRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 355

[Close]

BLAST of Csor.00g212260 vs. NCBI nr
Match: TYK24589.1 (putative F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 610 bits (1574), Expect = 5.68e-219
Identity = 313/356 (87.92%), Postives = 324/356 (91.01%), Query Frame = 0


Query: 1   MGKKLSIASARDRVVTRSQSIAMEREKIS--SSP--NPVVAVEPEGMVKRMRRDIKPIHS 60
           M KKLSIASARDRVVTRSQSI+MER K+S  SSP  NPVVA EPEGMVKRMRRDIKPIHS
Sbjct: 1   MAKKLSIASARDRVVTRSQSISMERAKMSKRSSPKNNPVVAAEPEGMVKRMRRDIKPIHS 60

Query: 61  CSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMED 120
           CSSP S FLTAHSSASSSASSS+CWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMED
Sbjct: 61  CSSPHSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMED 120

Query: 121 SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSV 180
           SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFF+DSSV
Sbjct: 121 SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSV 180

Query: 181 VLLSERLGSQVKIPKQDSMDNTLESGCCILRNVKTGIWIA----------------GTMQ 240
            LLSERLGSQ+K+PKQ S  NTLESGCC+L NVKTGIWIA                GTMQ
Sbjct: 181 ALLSERLGSQMKVPKQGSTANTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQ 240

Query: 241 TLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKS 300
           TLDARHIELFLNEGYQDGSWEYQI+GSHDIRKPTESASGAIFDVKHL+DSSTSGILDLKS
Sbjct: 241 TLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKS 300

Query: 301 WTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 336
           WTGSR DWQPKAMITL+AVAVNTYLQDNEGVHVKYQAM+AGANGEVVSIRISQQLL
Sbjct: 301 WTGSRADWQPKAMITLSAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 356

[Close]

BLAST of Csor.00g212260 vs. ExPASy TrEMBL
Match: A0A0A0KD88 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087760 PE=4 SV=1)

HSP 1 Score: 620 bits (1599), Expect = 4.11e-223
Identity = 315/355 (88.73%), Postives = 326/355 (91.83%), Query Frame = 0


Query: 1   MGKKLSIASARDRVVTRSQSIAMEREKI---SSSPNPVVAVEPEGMVKRMRRDIKPIHSC 60
           MGKKLSIASARDRVVTRSQSI+MER K+   SS  NPVVA EPEGMVKRMRRDIKPIHSC
Sbjct: 1   MGKKLSIASARDRVVTRSQSISMERAKMTKRSSPKNPVVAAEPEGMVKRMRRDIKPIHSC 60

Query: 61  SSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDS 120
           SSPRS FLTAHSSASSSASSS+CWYDADVWTEVAKFLDGRSLMMLAATSRWFYR VMEDS
Sbjct: 61  SSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRSVMEDS 120

Query: 121 IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVV 180
           IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFF+DSSV 
Sbjct: 121 IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSVA 180

Query: 181 LLSERLGSQVKIPKQDSMDNTLESGCCILRNVKTGIWIA----------------GTMQT 240
           LLSERLGSQ+KIPKQDS DNTLESGCC+L NVKTGIWIA                GTMQT
Sbjct: 181 LLSERLGSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQT 240

Query: 241 LDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSW 300
           LDARHIELFLNEGYQDGSWEYQI+GSHDIRKPTESASGAIFDVKHL+DSSTSG+LDLKSW
Sbjct: 241 LDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGLLDLKSW 300

Query: 301 TGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 336
           TG+RTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAM+AGANGEVVSIRISQQLL
Sbjct: 301 TGNRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 355

[Close]

BLAST of Csor.00g212260 vs. ExPASy TrEMBL
Match: A0A5D3DMQ8 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001350 PE=4 SV=1)

HSP 1 Score: 610 bits (1574), Expect = 2.75e-219
Identity = 313/356 (87.92%), Postives = 324/356 (91.01%), Query Frame = 0


Query: 1   MGKKLSIASARDRVVTRSQSIAMEREKIS--SSP--NPVVAVEPEGMVKRMRRDIKPIHS 60
           M KKLSIASARDRVVTRSQSI+MER K+S  SSP  NPVVA EPEGMVKRMRRDIKPIHS
Sbjct: 1   MAKKLSIASARDRVVTRSQSISMERAKMSKRSSPKNNPVVAAEPEGMVKRMRRDIKPIHS 60

Query: 61  CSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMED 120
           CSSP S FLTAHSSASSSASSS+CWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMED
Sbjct: 61  CSSPHSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMED 120

Query: 121 SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSV 180
           SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFF+DSSV
Sbjct: 121 SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSV 180

Query: 181 VLLSERLGSQVKIPKQDSMDNTLESGCCILRNVKTGIWIA----------------GTMQ 240
            LLSERLGSQ+K+PKQ S  NTLESGCC+L NVKTGIWIA                GTMQ
Sbjct: 181 ALLSERLGSQMKVPKQGSTANTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQ 240

Query: 241 TLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKS 300
           TLDARHIELFLNEGYQDGSWEYQI+GSHDIRKPTESASGAIFDVKHL+DSSTSGILDLKS
Sbjct: 241 TLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKS 300

Query: 301 WTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 336
           WTGSR DWQPKAMITL+AVAVNTYLQDNEGVHVKYQAM+AGANGEVVSIRISQQLL
Sbjct: 301 WTGSRADWQPKAMITLSAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 356

[Close]

BLAST of Csor.00g212260 vs. ExPASy TrEMBL
Match: A0A1S3CBL0 (probable F-box protein At3g61730 OS=Cucumis melo OX=3656 GN=LOC103498945 PE=4 SV=1)

HSP 1 Score: 576 bits (1485), Expect = 4.42e-206
Identity = 293/334 (87.72%), Postives = 303/334 (90.72%), Query Frame = 0


Query: 23  MEREKIS--SSP--NPVVAVEPEGMVKRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSS 82
           MER K+S  SSP  NPVVA EPEGMVKRMRRDIKPIHSCSSP S FLTAHSSASSSASSS
Sbjct: 1   MERAKMSKRSSPKNNPVVAAEPEGMVKRMRRDIKPIHSCSSPHSAFLTAHSSASSSASSS 60

Query: 83  ACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFK 142
           +CWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFK
Sbjct: 61  SCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFK 120

Query: 143 WIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSMDNT 202
           WIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFF+DSSV LLSERLGSQ+K+PKQ S  NT
Sbjct: 121 WIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSVALLSERLGSQMKVPKQGSTANT 180

Query: 203 LESGCCILRNVKTGIWIA----------------GTMQTLDARHIELFLNEGYQDGSWEY 262
           LESGCC+L NVKTGIWIA                GTMQTLDARHIELFLNEGYQDGSWEY
Sbjct: 181 LESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEY 240

Query: 263 QILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVN 322
           QI+GSHDIRKPTESASGAIFDVKHL+DSSTSGILDLKSWTGSR DWQPKAMITL+AVAVN
Sbjct: 241 QIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKSWTGSRADWQPKAMITLSAVAVN 300

Query: 323 TYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 336
           TYLQDNEGVHVKYQAM+AGANGEVVSIRISQQLL
Sbjct: 301 TYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 334

[Close]

BLAST of Csor.00g212260 vs. ExPASy TrEMBL
Match: A0A6J1DCT6 (probable F-box protein At3g61730 OS=Momordica charantia OX=3673 GN=LOC111019845 PE=4 SV=1)

HSP 1 Score: 562 bits (1448), Expect = 2.97e-200
Identity = 290/355 (81.69%), Postives = 309/355 (87.04%), Query Frame = 0


Query: 1   MGKKLSIASARDRVVTRSQSIAMEREKISSSPNPVVAVEPEG-MVKRMRRDIKP--IHSC 60
           MGKKLSI+SARDRVVTRSQS AMERE++S   +P+ A EPEG M KR+RRD+K   IH C
Sbjct: 1   MGKKLSISSARDRVVTRSQSSAMERERLSKR-SPIAAAEPEGVMAKRIRRDVKHPIIHPC 60

Query: 61  SSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDS 120
           SSPRS FLTA        SSS+CWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDS
Sbjct: 61  SSPRSAFLTA--------SSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDS 120

Query: 121 IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVV 180
           IWKYVCLRDLQV APQ TAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAF MDSSV 
Sbjct: 121 IWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVA 180

Query: 181 LLSERLGSQVKIPKQDSMDNTLESGCCILRNVKTGIWIA----------------GTMQT 240
           LLSERLGSQVKIPKQDS DN LESGCC+L NVKTGIWIA                GTMQT
Sbjct: 181 LLSERLGSQVKIPKQDSKDNMLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQT 240

Query: 241 LDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSW 300
           LDARHIELFLNEGYQDGSW+YQI+GSHDIRKPTE+ASGAIFDVKHL+DSSTSGILD+++W
Sbjct: 241 LDARHIELFLNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQTW 300

Query: 301 TGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 336
           +G RTDWQPKAMITL+AVAVNTYLQDNEGVHVKYQAM+ GANGEVVSIRISQQLL
Sbjct: 301 SGKRTDWQPKAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL 346

[Close]

BLAST of Csor.00g212260 vs. ExPASy TrEMBL
Match: A0A6J1EVC3 (probable F-box protein At3g61730 OS=Cucurbita moschata OX=3662 GN=LOC111436308 PE=4 SV=1)

HSP 1 Score: 508 bits (1309), Expect = 4.06e-180
Identity = 253/271 (93.36%), Postives = 254/271 (93.73%), Query Frame = 0


Query: 82  YDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIK 141
           YDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIK
Sbjct: 11  YDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIK 70

Query: 142 LYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSMDNTLES 201
           LYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSMDNTLES
Sbjct: 71  LYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSMDNTLES 130

Query: 202 GCCILRNVKTGIWIA----------------GTMQTLDARHIELFLNEGYQDGSWEYQIL 261
           GCC+L NVKTGIWIA                GTMQTLDARHIELFLNEGYQDGSWEYQIL
Sbjct: 131 GCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQIL 190

Query: 262 GSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVNTYL 321
           GSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVNTYL
Sbjct: 191 GSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVNTYL 250

Query: 322 QDNEGVHVKYQAMKAGANGEVVSIRISQQLL 336
           QDNEGVHVKYQAMKAGANGEVVSIRISQQLL
Sbjct: 251 QDNEGVHVKYQAMKAGANGEVVSIRISQQLL 281

[Close]

BLAST of Csor.00g212260 vs. TAIR 10
Match: AT5G36000.1 (BEST Arabidopsis thaliana protein match is: reduced male fertility (TAIR:AT3G61730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 342.4 bits (877), Expect = 4.0e-94
Identity = 162/303 (53.47%), Postives = 217/303 (71.62%), Query Frame = 0


Query: 51  IKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFY 110
           ++ IH C SPR +  T  S  S        WY+ D+WT + +FLDG+SL+ L AT++WFY
Sbjct: 61  LRGIHGCVSPRCSAPTYQSRFS--------WYEQDIWTYITRFLDGKSLVKLGATNKWFY 120

Query: 111 RLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAF 170
           ++ MED++W++ CLRDLQVP     +  WIK+Y SAFDGSHSY+F Q+EKH+DWMR+GAF
Sbjct: 121 KIAMEDTVWRFACLRDLQVPETFPVSSTWIKIYASAFDGSHSYLFHQKEKHIDWMRLGAF 180

Query: 171 FMDSSVVLLSERLGSQVKIPKQDSMDNTLE-SGCCILRNVKTGIWIA------------- 230
            +DS    L+E L  ++K+P + +++  L+ SG C++ ++K+GIWIA             
Sbjct: 181 VLDSRTSFLTESLSGRLKVPTEGTIEQMLQSSGSCLINDIKSGIWIADLQLLRCPLCDLS 240

Query: 231 ---GTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTS 290
              GTMQTLD RHIELFL+EGY+DGSW+Y ++GSH + K   +A GAIFD+KHLK SS+S
Sbjct: 241 TCDGTMQTLDVRHIELFLSEGYKDGSWDYNLIGSHKLEKDASAACGAIFDLKHLKKSSSS 300

Query: 291 GILDLKSWTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQ 337
           GIL+LKSWTG   D QPKA+I  +AVAV+T LQ NEG+ VKY  MKAG +G++VSIRISQ
Sbjct: 301 GILNLKSWTGEADDSQPKAVIAPHAVAVHTRLQQNEGILVKYHTMKAGTDGDIVSIRISQ 355

[Close]

BLAST of Csor.00g212260 vs. TAIR 10
Match: AT3G61730.1 (reduced male fertility )

HSP 1 Score: 332.0 bits (850), Expect = 5.5e-91
Identity = 168/343 (48.98%), Postives = 234/343 (68.22%), Query Frame = 0


Query: 11  RDRVVTRSQSIAMEREKISSSPNPVVAVEPEGMVKRMRRDIKPIHSCSSPRSTFLTAHSS 70
           R  V +  Q   ++RE+   +   +V    +   ++  + ++ I  C SPR +  T  S 
Sbjct: 29  RKLVQSNEQKNDIQREEDGRAKRRIV----QSSDQKNGKILRGIRGCVSPRCSAQTYQSR 88

Query: 71  ASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVP 130
            S        WY+ D+WT +++FLDG+SL+ L AT++WFY++ MED++W++ CLRDLQVP
Sbjct: 89  FS--------WYEQDIWTYISRFLDGKSLVKLGATNKWFYKIAMEDTVWRFACLRDLQVP 148

Query: 131 APQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIP 190
            P   +  WIK+Y SAFDGSHSY+FRQ+EKH     IGAF +DS   LL+E L  ++K P
Sbjct: 149 VPFPVSSTWIKIYASAFDGSHSYLFRQKEKH-----IGAFVLDSRTSLLTESLSGRLKFP 208

Query: 191 KQDSMDNTLE-SGCCILRNVKTGIWIA----------------GTMQTLDARHIELFLNE 250
           ++ +++  L+ SG C++ ++K+GIWIA                GTMQTLDARHIELFL+E
Sbjct: 209 REGTIERMLQSSGSCLINDIKSGIWIADLQLVRCPVCDLSTCDGTMQTLDARHIELFLSE 268

Query: 251 GYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAM 310
           GY+DGSW+Y ++GSH ++K   +A GAIFD+KHLK+SS SGIL+LKSWTG   D QPKA+
Sbjct: 269 GYKDGSWDYNLIGSHKLQKNASAACGAIFDLKHLKESSYSGILNLKSWTGESNDSQPKAV 328

Query: 311 ITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 337
           I  +AVAV+T LQ+NEG+ VKY  MKAG +G++VSIRISQQLL
Sbjct: 329 IAPHAVAVHTRLQENEGILVKYHTMKAGTDGDIVSIRISQQLL 354

[Close]

BLAST of Csor.00g212260 vs. TAIR 10
Match: AT3G62500.1 (BEST Arabidopsis thaliana protein match is: SET domain protein 14 (TAIR:AT3G61740.1); Has 66 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 160.2 bits (404), Expect = 2.8e-39
Identity = 79/152 (51.97%), Postives = 110/152 (72.37%), Query Frame = 0


Query: 163 DWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSMDNTLESGCCILRNVKTGIWIAGTMQTL 222
           DWM IGAF +DS   LL+E L  ++K+PK+ +++  L+    ++R V        TMQTL
Sbjct: 178 DWMPIGAFVLDSRTSLLTESLSGRLKVPKEGTIERMLQKYLQLVRPVCD----LRTMQTL 237

Query: 223 DARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWT 282
           DARHIELFL+EGY+DGSW+Y ++GSH ++K   +A GAIFD+KH K+SS+SGIL+LKSWT
Sbjct: 238 DARHIELFLSEGYKDGSWDYNLIGSHKLQKNASAACGAIFDLKHHKESSSSGILNLKSWT 297

Query: 283 GSRTDWQPKAMITLNAVAVNTYLQDNEGVHVK 315
           G     QPKA+I  +AVAV+T L++NE   ++
Sbjct: 298 GQPDISQPKAVIAPHAVAVHTRLRENEVAEIQ 325

The following BLAST results are available for this feature:

BLAST of Csor.00g212260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M365	4.6e-95	50.15	Probable F-box protein At3g61730 OS=Arabidopsis thaliana OX=3702 GN=RMF PE=1 SV=...	[more]
Q9FGB8	5.7e-93	53.47	Probable F-box protein At5g36000 OS=Arabidopsis thaliana OX=3702 GN=At5g36000 PE...	[more]

BLAST of Csor.00g212260 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6575300.1	1.84e-242	100.00	putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023548391.1	2.95e-236	94.60	probable F-box protein At3g61730 [Cucurbita pepo subsp. pepo]	[more]
XP_038875515.1	6.02e-225	90.40	probable F-box protein At3g61730 [Benincasa hispida]	[more]
XP_004140675.1	8.49e-223	88.73	probable F-box protein At3g61730 [Cucumis sativus] >KGN46347.1 hypothetical prot...	[more]
TYK24589.1	5.68e-219	87.92	putative F-box protein [Cucumis melo var. makuwa]	[more]

BLAST of Csor.00g212260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KD88	4.11e-223	88.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087760 PE=4 SV=1	[more]
A0A5D3DMQ8	2.75e-219	87.92	Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2...	[more]
A0A1S3CBL0	4.42e-206	87.72	probable F-box protein At3g61730 OS=Cucumis melo OX=3656 GN=LOC103498945 PE=4 SV...	[more]
A0A6J1DCT6	2.97e-200	81.69	probable F-box protein At3g61730 OS=Momordica charantia OX=3673 GN=LOC111019845 ...	[more]
A0A6J1EVC3	4.06e-180	93.36	probable F-box protein At3g61730 OS=Cucurbita moschata OX=3662 GN=LOC111436308 P...	[more]

BLAST of Csor.00g212260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G36000.1	4.0e-94	53.47	BEST Arabidopsis thaliana protein match is: reduced male fertility (TAIR:AT3G617...	[more]
AT3G61730.1	5.5e-91	48.98	reduced male fertility	[more]
AT3G62500.1	2.8e-39	51.97	BEST Arabidopsis thaliana protein match is: SET domain protein 14 (TAIR:AT3G6174...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1280.50		coord: 81..163 e-value: 4.0E-6 score: 28.6
None	No IPR available	PANTHER	PTHR47149	F-BOX PROTEIN RMF	coord: 21..336
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 85..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g212260.m01	Csor.00g212260.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0061458	reproductive system development
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding