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Csor.00g211790 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglestart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGAAGAAGAGGGTGGTGGTGTTGAAGAAAACTGAGGGCTCTGGCGCCCGGACCCGCTCCAGAGTGGGCTCTGTCGTGCACTATGTGGAGTGTCGGAAGAACCATGCTGCGAAGCTTGGTGGGTTTGCTGTGGACGGCTGCCGGGAGTTCATGGCCACTGGAGAGGATGGGACTGAGGAGGCTTTCTTCTGTGCTGCTTGTGGCTGCCACAGGAGCTTCCACCGCAGGGAGGTTAATGCTGAAGTTGTTATTGAGTATCATCCTCCAAACCCCAATCATTGA ATGATGAAGAAGAGGGTGGTGGTGTTGAAGAAAACTGAGGGCTCTGGCGCCCGGACCCGCTCCAGAGTGGGCTCTGTCGTGCACTATGTGGAGTGTCGGAAGAACCATGCTGCGAAGCTTGGTGGGTTTGCTGTGGACGGCTGCCGGGAGTTCATGGCCACTGGAGAGGATGGGACTGAGGAGGCTTTCTTCTGTGCTGCTTGTGGCTGCCACAGGAGCTTCCACCGCAGGGAGGTTAATGCTGAAGTTGTTATTGAGTATCATCCTCCAAACCCCAATCATTGA ATGATGAAGAAGAGGGTGGTGGTGTTGAAGAAAACTGAGGGCTCTGGCGCCCGGACCCGCTCCAGAGTGGGCTCTGTCGTGCACTATGTGGAGTGTCGGAAGAACCATGCTGCGAAGCTTGGTGGGTTTGCTGTGGACGGCTGCCGGGAGTTCATGGCCACTGGAGAGGATGGGACTGAGGAGGCTTTCTTCTGTGCTGCTTGTGGCTGCCACAGGAGCTTCCACCGCAGGGAGGTTAATGCTGAAGTTGTTATTGAGTATCATCCTCCAAACCCCAATCATTGA MMKKRVVVLKKTEGSGARTRSRVGSVVHYVECRKNHAAKLGGFAVDGCREFMATGEDGTEEAFFCAACGCHRSFHRREVNAEVVIEYHPPNPNH Homology
BLAST of Csor.00g211790 vs. ExPASy Swiss-Prot
Match: Q2Q493 (Mini zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=MIF3 PE=1 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 1.4e-25 Identity = 59/93 (63.44%), Postives = 70/93 (75.27%), Query Frame = 0
BLAST of Csor.00g211790 vs. ExPASy Swiss-Prot
Match: Q9CA51 (Mini zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=MIF1 PE=1 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 3.2e-25 Identity = 59/101 (58.42%), Postives = 70/101 (69.31%), Query Frame = 0
BLAST of Csor.00g211790 vs. ExPASy Swiss-Prot
Match: Q9LJW5 (Mini zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=MIF2 PE=1 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 6.2e-21 Identity = 51/95 (53.68%), Postives = 67/95 (70.53%), Query Frame = 0
BLAST of Csor.00g211790 vs. ExPASy Swiss-Prot
Match: B8BIU8 (Mini zinc finger protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=MIF1 PE=3 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 6.8e-20 Identity = 44/70 (62.86%), Postives = 50/70 (71.43%), Query Frame = 0
BLAST of Csor.00g211790 vs. ExPASy Swiss-Prot
Match: Q2RB28 (Mini zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=MIF1 PE=3 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 6.8e-20 Identity = 44/70 (62.86%), Postives = 50/70 (71.43%), Query Frame = 0
BLAST of Csor.00g211790 vs. NCBI nr
Match: XP_022933558.1 (mini zinc finger protein 3-like [Cucurbita moschata] >KAG6587537.1 Mini zinc finger protein 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 197 bits (501), Expect = 1.08e-63 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of Csor.00g211790 vs. NCBI nr
Match: XP_022973076.1 (mini zinc finger protein 3-like [Cucurbita maxima]) HSP 1 Score: 193 bits (491), Expect = 3.64e-62 Identity = 92/94 (97.87%), Postives = 92/94 (97.87%), Query Frame = 0
BLAST of Csor.00g211790 vs. NCBI nr
Match: XP_023531399.1 (mini zinc finger protein 3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 190 bits (482), Expect = 8.61e-61 Identity = 89/94 (94.68%), Postives = 92/94 (97.87%), Query Frame = 0
BLAST of Csor.00g211790 vs. NCBI nr
Match: KAG7021513.1 (Myb-related protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 197 bits (501), Expect = 2.69e-60 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of Csor.00g211790 vs. NCBI nr
Match: XP_022135253.1 (mini zinc finger protein 3-like [Momordica charantia]) HSP 1 Score: 150 bits (378), Expect = 6.14e-45 Identity = 70/93 (75.27%), Postives = 80/93 (86.02%), Query Frame = 0
BLAST of Csor.00g211790 vs. ExPASy TrEMBL
Match: A0A6J1F540 (mini zinc finger protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111440951 PE=4 SV=1) HSP 1 Score: 197 bits (501), Expect = 5.25e-64 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of Csor.00g211790 vs. ExPASy TrEMBL
Match: A0A6J1I7P6 (mini zinc finger protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111471595 PE=4 SV=1) HSP 1 Score: 193 bits (491), Expect = 1.76e-62 Identity = 92/94 (97.87%), Postives = 92/94 (97.87%), Query Frame = 0
BLAST of Csor.00g211790 vs. ExPASy TrEMBL
Match: A0A6J1C4B2 (mini zinc finger protein 3-like OS=Momordica charantia OX=3673 GN=LOC111007261 PE=4 SV=1) HSP 1 Score: 150 bits (378), Expect = 2.97e-45 Identity = 70/93 (75.27%), Postives = 80/93 (86.02%), Query Frame = 0
BLAST of Csor.00g211790 vs. ExPASy TrEMBL
Match: A0A6J1E6Q9 (mini zinc finger protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111429921 PE=4 SV=1) HSP 1 Score: 150 bits (378), Expect = 3.16e-45 Identity = 73/94 (77.66%), Postives = 81/94 (86.17%), Query Frame = 0
BLAST of Csor.00g211790 vs. ExPASy TrEMBL
Match: A0A6J1J9R5 (mini zinc finger protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111484829 PE=4 SV=1) HSP 1 Score: 149 bits (375), Expect = 9.05e-45 Identity = 72/94 (76.60%), Postives = 81/94 (86.17%), Query Frame = 0
BLAST of Csor.00g211790 vs. TAIR 10
Match: AT1G18835.1 (mini zinc finger ) HSP 1 Score: 116.7 bits (291), Expect = 1.0e-26 Identity = 59/93 (63.44%), Postives = 70/93 (75.27%), Query Frame = 0
BLAST of Csor.00g211790 vs. TAIR 10
Match: AT1G74660.1 (mini zinc finger 1 ) HSP 1 Score: 115.5 bits (288), Expect = 2.2e-26 Identity = 59/101 (58.42%), Postives = 70/101 (69.31%), Query Frame = 0
BLAST of Csor.00g211790 vs. TAIR 10
Match: AT3G28917.1 (mini zinc finger 2 ) HSP 1 Score: 101.3 bits (251), Expect = 4.4e-22 Identity = 51/95 (53.68%), Postives = 67/95 (70.53%), Query Frame = 0
BLAST of Csor.00g211790 vs. TAIR 10
Match: AT4G24660.1 (homeobox protein 22 ) HSP 1 Score: 91.3 bits (225), Expect = 4.5e-19 Identity = 47/90 (52.22%), Postives = 58/90 (64.44%), Query Frame = 0
BLAST of Csor.00g211790 vs. TAIR 10
Match: AT2G18350.1 (homeobox protein 24 ) HSP 1 Score: 87.8 bits (216), Expect = 5.0e-18 Identity = 38/74 (51.35%), Postives = 51/74 (68.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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