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Csor.00g211780 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTAGCACCAAAGCTTTGGTCTTTGCCTTACTTCTTGCTGGGGTTTCCTTGTGTGTTCAACCCCAAACAGCATCTGGGCTCACCACCATTGATCTTGCTCTCAAATGGGTGGCCTTCAAATCGCCAATTACCAACACCCACAACCCTGATTCTGTGAAGAAATTGAAGATGAAGAACATGAGCCTGGCTCCTTCACCAGCCATGCATTTTGACCCCAATCAGTCCAACAAAAGAGGAGTCAAGAAAGGATCCGACCCCATTCACAACAGATCCTAG ATGCTTAGCACCAAAGCTTTGGTCTTTGCCTTACTTCTTGCTGGGGTTTCCTTGTGTGTTCAACCCCAAACAGCATCTGGGCTCACCACCATTGATCTTGCTCTCAAATGGGTGGCCTTCAAATCGCCAATTACCAACACCCACAACCCTGATTCTGTGAAGAAATTGAAGATGAAGAACATGAGCCTGGCTCCTTCACCAGCCATGCATTTTGACCCCAATCAGTCCAACAAAAGAGGAGTCAAGAAAGGATCCGACCCCATTCACAACAGATCCTAG ATGCTTAGCACCAAAGCTTTGGTCTTTGCCTTACTTCTTGCTGGGGTTTCCTTGTGTGTTCAACCCCAAACAGCATCTGGGCTCACCACCATTGATCTTGCTCTCAAATGGGTGGCCTTCAAATCGCCAATTACCAACACCCACAACCCTGATTCTGTGAAGAAATTGAAGATGAAGAACATGAGCCTGGCTCCTTCACCAGCCATGCATTTTGACCCCAATCAGTCCAACAAAAGAGGAGTCAAGAAAGGATCCGACCCCATTCACAACAGATCCTAG MLSTKALVFALLLAGVSLCVQPQTASGLTTIDLALKWVAFKSPITNTHNPDSVKKLKMKNMSLAPSPAMHFDPNQSNKRGVKKGSDPIHNRS Homology
BLAST of Csor.00g211780 vs. NCBI nr
Match: KAG6587538.1 (hypothetical protein SDJN03_16103, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 182 bits (463), Expect = 5.90e-58 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of Csor.00g211780 vs. NCBI nr
Match: KAG6589506.1 (hypothetical protein SDJN03_14929, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 122 bits (306), Expect = 6.03e-34 Identity = 66/89 (74.16%), Postives = 72/89 (80.90%), Query Frame = 0
BLAST of Csor.00g211780 vs. NCBI nr
Match: KGN63668.1 (hypothetical protein Csa_014085 [Cucumis sativus]) HSP 1 Score: 103 bits (257), Expect = 1.80e-26 Identity = 64/96 (66.67%), Postives = 72/96 (75.00%), Query Frame = 0
BLAST of Csor.00g211780 vs. NCBI nr
Match: KDO55565.1 (hypothetical protein CISIN_1g039594mg [Citrus sinensis]) HSP 1 Score: 77.0 bits (188), Expect = 4.94e-16 Identity = 47/86 (54.65%), Postives = 58/86 (67.44%), Query Frame = 0
BLAST of Csor.00g211780 vs. NCBI nr
Match: OMP04794.1 (hypothetical protein COLO4_09292 [Corchorus olitorius]) HSP 1 Score: 77.0 bits (188), Expect = 5.21e-16 Identity = 46/87 (52.87%), Postives = 54/87 (62.07%), Query Frame = 0
BLAST of Csor.00g211780 vs. ExPASy TrEMBL
Match: A0A0A0LPD5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009720 PE=4 SV=1) HSP 1 Score: 103 bits (257), Expect = 8.70e-27 Identity = 64/96 (66.67%), Postives = 72/96 (75.00%), Query Frame = 0
BLAST of Csor.00g211780 vs. ExPASy TrEMBL
Match: A0A067ENV6 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g039594mg PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 2.39e-16 Identity = 47/86 (54.65%), Postives = 58/86 (67.44%), Query Frame = 0
BLAST of Csor.00g211780 vs. ExPASy TrEMBL
Match: A0A1R3KCL9 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_09292 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 2.52e-16 Identity = 46/87 (52.87%), Postives = 54/87 (62.07%), Query Frame = 0
BLAST of Csor.00g211780 vs. ExPASy TrEMBL
Match: A0A314YU30 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_16404 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 9.67e-16 Identity = 42/78 (53.85%), Postives = 57/78 (73.08%), Query Frame = 0
BLAST of Csor.00g211780 vs. ExPASy TrEMBL
Match: V4VM13 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10023845mg PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 9.67e-16 Identity = 46/86 (53.49%), Postives = 57/86 (66.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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