Csor.00g211380 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTAACTGCAACGCTAGTCCATTCGTTTCATTGGGCCTTGCCGAACGGGCTTTTGCCCAGTAAGTTGAACATGGACGAGGCCTCTGGACTGACCCTCCGTCGGGCCCAGCCCTTGGTTGCTCATCCTCGGCCTAGTATTAGTTTTTCCCGCCGGCGTCTTCCAACGATCCGTTCAAGGTTGCCGGCCATACATTTTCAGTTTCACTGTAAGAATAAACCCCCATACCCACCACCTAGCGCAGATATTGTCCCTTCCCCTCTAGTTTCCACACCCTTATAAATAAATGATGTTTTGTTCTGTTCTCTAATCAACGCGGAACATCACAATTCACCCATTCGGGATTCAGCGTCCTAGCGTACACTTGTTCCTTTCTCCAATAAATGTGTGACCACACAAAATTCATCTCTTTTGGGGCCAGCGTCTTTACTGGCACACCGCCTCGTGTCTACCCCTTCGGAGAATAGAGAAGGCTGGCATCGCGCTTTATACCATTTGTAACGCTTCAGATTCACATATTGTCAGGTTTTTCCTTTCGAACTTCCCCTAAAGACTTTAAAACGCGTCTGCTATTGAATATGGGATAAAAGAGTGCTTAGTTTCGGGAAGTTATTGGTGGGTCACGCGCGTACTGGTTAACAAGGAGCAGAAAGAGCAGTGGCTAGAAAACCCAAAAGTGGGCCACTCTAATTGATGCCATTTACCCTCTGAAAACCCACTCCCTTTATTTTGTATAGAACATACCCTCCACTTCAGGGTTTTTTACATTCTTTCCCTTTCTCTCCATAGCTCTCTCTTTCTGTGTGTGTGTGTGTGTGGTAGTGACAACTTTCTTCTGCCCACCATCTCTGAGCTTTGTAATCATGTCTTGTGGGATGCCTGTTTTAGCTATTGGGCTGCTTATTCTCGCCATGACTGGCCATTCACGTAAGCTCCCTACATTTTTTATGCATTCTTTACTTCTGTTGTGTAGATCAAAGGCATATTCTGGTATCTCTTTTTTAGTTTGACTTCTCATGAGCATTTCTCTTGTGAACCATGCTTTTCTCAATGTGCATTTAACCCTCTTTACTGAAATGTAACAATAATTCACCATTTGTTGTTCCTTTTGGGTGGCTAAGTGGTTCAAGAGTTCTGTGAGTTTCCAGTACCTTTGAAGTTTCTTTAGATGTCCAGATCTCGTTGTGTTTCGTTGGTTTTCTTCTGGCTGTCCCTTAAAATGCTGGTTTTATTGAACTTGTAGGTGCAACATGGTGTGTTTGCAAGAGCGGATTGGGCGATGCAGCTCTTCAGAAGACACTGGACTATGCTTGTGGCGCTGGGGCTGACTGTGTCCCTATTCATCAAAATGGTGGCTGTTTCCTTCCCAACACTGTCGAGGCCCATTGTTCCTATGCTGCTAATAGCTATTTCCAAAGGAAGGGCCAAGCTCCAGGTTCCTGTGATTTTTCTGGCACAGCAATGGTCACTACTACTAACCCCAGTAAGACTTCGCTCTCTACATTCTCATGTTTTTCTCTAATTTTTTTCTAAGTAAGAACTGATTAACTTGGTGAGAAGAAAAATGGAAACAAACCCACATCGGAATTAACTCAGATACTCATTTCAAAGGCCCTTAGCCGTCTATTTCAGCTACTAAATGAAATTATGACTTCATGCTTATGAATATCTCTTTCTTTCTTGGTATCTTTTCAGGCATTTCAGGCTGCGTTTATCCTTCTAGCGCTAGGTATGCTTCTGCTTTATTTTATGATTTAGTTTTCATTTGAACAAACAGAGAAGCCTTTTACTTGAAAAGAAGTAGAGCATCTTGTTAATTAAAGACTCAAAAACTAAATTCAAAGTTAGCTTTTGATAATCATAGATACTGTTGGAAAAGATGCTTTTGGCCATTAGATTAGCCATCATTATCCCATTGTGTTGTAATCATAGATGCTCTTCTTGTCAGTCGACTATAATGTAGTTTTACGACCATTTTTTCTGGCTTCTTCTCTTAGATTGATATGAAGCTCATGAGCTATCCTGTAATAAAACTTGTTGTTGCTGATACTTTCTTCTCAGTTCGTTCTTCCATAATTCGAGAATAGAGAAAGAAGAGATAAAAGGGCTCTATGGAGAATATGGTCATAAATCCATAATAGATTCCGTATTTGTCTTTAACCGAACTTACTGATACATTTATTTTTCAAAAGATAGTGGGAGGTTGAAAATGGAGTTTTCATAATGTTGGTCTGATTTATGTTACATCCTCGAGATGGGATATCATTGAGATTTGAGCTTAGGCCGACCATGATTTTTGGAGAGAGGGGTTCACATGTGGAGGGAGGAAGGTTTGTTGGGGAAGAACTGTGTTCTATCTCATCTTATCTGAAGTGGGTTTGATTTGATTTTTGGTTATGTATTGTTGCAGCCCTGTAAATAGTGGGACTATTCCAGTATCTGGGACTCCAACCACCACCAACCCGGGCACTGGATTTACTCCAACCACCACAACCAACACTCCATTTGGTTCTACAACACCTACCGGCGGTGTCATGGGCGGGAATGGCTTCGGCACTGGTAGCAACGGTCTAGGACCACCGGGCGTCGGCGGGATGAACACCGACTACAGTGACAGCGGATCAAGGCTCCAACTTACTCTCATTGCTAATGTACTTGCTTTCTTGTTCGCTCTCATGTTCTTTAACCATATGGTTTGA ATGTTAACTGCAACGCTAGTCCATTCGTTTCATTGGGCCTTGCCGAACGGGCTTTTGCCCAGTAAGTTGAACATGGACGAGGCCTCTGGACTGACCCTCCGTCGGGCCCAGCCCTTGGTTGCTCATCCTCGGCCTAGTATTAGTTTTTCCCGCCGGCGTCTTCCAACGATCCGTTCAAGGTTGCCGGCCATACATTTTCAGTTTCACTTGACAACTTTCTTCTGCCCACCATCTCTGAGCTTTGTAATCATGTCTTGTGGGATGCCTGTTTTAGCTATTGGGCTGCTTATTCTCGCCATGACTGGCCATTCACGTGCAACATGGTGTGTTTGCAAGAGCGGATTGGGCGATGCAGCTCTTCAGAAGACACTGGACTATGCTTGTGGCGCTGGGGCTGACTGTGTCCCTATTCATCAAAATGGTGGCTGTTTCCTTCCCAACACTGTCGAGGCCCATTGTTCCTATGCTGCTAATAGCTATTTCCAAAGGAAGGGCCAAGCTCCAGGTTCCTGTGATTTTTCTGGCACAGCAATGGTCACTACTACTAACCCCAGCATTTCAGGCTGCGTTTATCCTTCTAGCGCTAGCCCTGTAAATAGTGGGACTATTCCAGTATCTGGGACTCCAACCACCACCAACCCGGGCACTGGATTTACTCCAACCACCACAACCAACACTCCATTTGGTTCTACAACACCTACCGGCGGTGTCATGGGCGGGAATGGCTTCGGCACTGGTAGCAACGGTCTAGGACCACCGGGCGTCGGCGGGATGAACACCGACTACAGTGACAGCGGATCAAGGCTCCAACTTACTCTCATTGCTAATGTACTTGCTTTCTTGTTCGCTCTCATGTTCTTTAACCATATGGTTTGA ATGTTAACTGCAACGCTAGTCCATTCGTTTCATTGGGCCTTGCCGAACGGGCTTTTGCCCAGTAAGTTGAACATGGACGAGGCCTCTGGACTGACCCTCCGTCGGGCCCAGCCCTTGGTTGCTCATCCTCGGCCTAGTATTAGTTTTTCCCGCCGGCGTCTTCCAACGATCCGTTCAAGGTTGCCGGCCATACATTTTCAGTTTCACTTGACAACTTTCTTCTGCCCACCATCTCTGAGCTTTGTAATCATGTCTTGTGGGATGCCTGTTTTAGCTATTGGGCTGCTTATTCTCGCCATGACTGGCCATTCACGTGCAACATGGTGTGTTTGCAAGAGCGGATTGGGCGATGCAGCTCTTCAGAAGACACTGGACTATGCTTGTGGCGCTGGGGCTGACTGTGTCCCTATTCATCAAAATGGTGGCTGTTTCCTTCCCAACACTGTCGAGGCCCATTGTTCCTATGCTGCTAATAGCTATTTCCAAAGGAAGGGCCAAGCTCCAGGTTCCTGTGATTTTTCTGGCACAGCAATGGTCACTACTACTAACCCCAGCATTTCAGGCTGCGTTTATCCTTCTAGCGCTAGCCCTGTAAATAGTGGGACTATTCCAGTATCTGGGACTCCAACCACCACCAACCCGGGCACTGGATTTACTCCAACCACCACAACCAACACTCCATTTGGTTCTACAACACCTACCGGCGGTGTCATGGGCGGGAATGGCTTCGGCACTGGTAGCAACGGTCTAGGACCACCGGGCGTCGGCGGGATGAACACCGACTACAGTGACAGCGGATCAAGGCTCCAACTTACTCTCATTGCTAATGTACTTGCTTTCTTGTTCGCTCTCATGTTCTTTAACCATATGGTTTGA MLTATLVHSFHWALPNGLLPSKLNMDEASGLTLRRAQPLVAHPRPSISFSRRRLPTIRSRLPAIHFQFHLTTFFCPPSLSFVIMSCGMPVLAIGLLILAMTGHSRATWCVCKSGLGDAALQKTLDYACGAGADCVPIHQNGGCFLPNTVEAHCSYAANSYFQRKGQAPGSCDFSGTAMVTTTNPSISGCVYPSSASPVNSGTIPVSGTPTTTNPGTGFTPTTTTNTPFGSTTPTGGVMGGNGFGTGSNGLGPPGVGGMNTDYSDSGSRLQLTLIANVLAFLFALMFFNHMV Homology
BLAST of Csor.00g211380 vs. ExPASy Swiss-Prot
Match: Q9FZ86 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana OX=3702 GN=PDCB3 PE=1 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 2.8e-40 Identity = 102/202 (50.50%), Postives = 127/202 (62.87%), Query Frame = 0
BLAST of Csor.00g211380 vs. ExPASy Swiss-Prot
Match: Q9FNQ2 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=PDCB1 PE=1 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 5.9e-38 Identity = 94/191 (49.21%), Postives = 119/191 (62.30%), Query Frame = 0
BLAST of Csor.00g211380 vs. ExPASy Swiss-Prot
Match: Q9SD84 (PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana OX=3702 GN=PDCB2 PE=1 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 3.2e-36 Identity = 96/193 (49.74%), Postives = 124/193 (64.25%), Query Frame = 0
BLAST of Csor.00g211380 vs. ExPASy Swiss-Prot
Match: Q93V72 (PLASMODESMATA CALLOSE-BINDING PROTEIN 4 OS=Arabidopsis thaliana OX=3702 GN=PDCB4 PE=1 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 2.6e-25 Identity = 84/182 (46.15%), Postives = 105/182 (57.69%), Query Frame = 0
BLAST of Csor.00g211380 vs. ExPASy Swiss-Prot
Match: Q9FZD0 (Carbohydrate-binding X8 domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=At1g26450 PE=2 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 1.5e-17 Identity = 66/175 (37.71%), Postives = 92/175 (52.57%), Query Frame = 0
BLAST of Csor.00g211380 vs. NCBI nr
Match: KAG6587578.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 569 bits (1466), Expect = 2.40e-204 Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0
BLAST of Csor.00g211380 vs. NCBI nr
Match: XP_022933633.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucurbita moschata] >KAG7021544.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 406 bits (1043), Expect = 3.34e-141 Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0
BLAST of Csor.00g211380 vs. NCBI nr
Match: XP_023004287.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucurbita maxima]) HSP 1 Score: 400 bits (1029), Expect = 4.53e-139 Identity = 205/208 (98.56%), Postives = 205/208 (98.56%), Query Frame = 0
BLAST of Csor.00g211380 vs. NCBI nr
Match: XP_023530699.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 400 bits (1027), Expect = 9.13e-139 Identity = 205/208 (98.56%), Postives = 206/208 (99.04%), Query Frame = 0
BLAST of Csor.00g211380 vs. NCBI nr
Match: XP_038878558.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Benincasa hispida]) HSP 1 Score: 347 bits (891), Expect = 4.93e-118 Identity = 181/212 (85.38%), Postives = 197/212 (92.92%), Query Frame = 0
BLAST of Csor.00g211380 vs. ExPASy TrEMBL
Match: A0A6J1F5D0 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucurbita moschata OX=3662 GN=LOC111440995 PE=4 SV=1) HSP 1 Score: 406 bits (1043), Expect = 1.62e-141 Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0
BLAST of Csor.00g211380 vs. ExPASy TrEMBL
Match: A0A6J1KQ09 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucurbita maxima OX=3661 GN=LOC111497655 PE=4 SV=1) HSP 1 Score: 400 bits (1029), Expect = 2.19e-139 Identity = 205/208 (98.56%), Postives = 205/208 (98.56%), Query Frame = 0
BLAST of Csor.00g211380 vs. ExPASy TrEMBL
Match: A0A6J1E2D5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucurbita moschata OX=3662 GN=LOC111430147 PE=4 SV=1) HSP 1 Score: 331 bits (849), Expect = 4.90e-112 Identity = 171/207 (82.61%), Postives = 189/207 (91.30%), Query Frame = 0
BLAST of Csor.00g211380 vs. ExPASy TrEMBL
Match: A0A1S3BVT1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Cucumis melo OX=3656 GN=LOC103494037 PE=4 SV=1) HSP 1 Score: 329 bits (843), Expect = 4.39e-110 Identity = 180/221 (81.45%), Postives = 191/221 (86.43%), Query Frame = 0
BLAST of Csor.00g211380 vs. ExPASy TrEMBL
Match: A0A6J1JDI8 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucurbita maxima OX=3661 GN=LOC111485814 PE=4 SV=1) HSP 1 Score: 326 bits (836), Expect = 4.65e-110 Identity = 170/207 (82.13%), Postives = 188/207 (90.82%), Query Frame = 0
BLAST of Csor.00g211380 vs. TAIR 10
Match: AT1G18650.1 (plasmodesmata callose-binding protein 3 ) HSP 1 Score: 167.2 bits (422), Expect = 2.0e-41 Identity = 102/202 (50.50%), Postives = 127/202 (62.87%), Query Frame = 0
BLAST of Csor.00g211380 vs. TAIR 10
Match: AT5G61130.1 (plasmodesmata callose-binding protein 1 ) HSP 1 Score: 159.5 bits (402), Expect = 4.2e-39 Identity = 94/191 (49.21%), Postives = 119/191 (62.30%), Query Frame = 0
BLAST of Csor.00g211380 vs. TAIR 10
Match: AT5G08000.1 (glucan endo-1,3-beta-glucosidase-like protein 3 ) HSP 1 Score: 153.7 bits (387), Expect = 2.3e-37 Identity = 96/193 (49.74%), Postives = 124/193 (64.25%), Query Frame = 0
BLAST of Csor.00g211380 vs. TAIR 10
Match: AT4G13600.1 (Carbohydrate-binding X8 domain superfamily protein ) HSP 1 Score: 136.7 bits (343), Expect = 2.9e-32 Identity = 96/233 (41.20%), Postives = 126/233 (54.08%), Query Frame = 0
BLAST of Csor.00g211380 vs. TAIR 10
Match: AT1G13830.1 (Carbohydrate-binding X8 domain superfamily protein ) HSP 1 Score: 131.7 bits (330), Expect = 9.4e-31 Identity = 91/199 (45.73%), Postives = 113/199 (56.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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