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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSinitialstart_codonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCTAAGAAAACACACCCGATGCAGAGGTTGAGAGTTTTCTCAATCGTCGGCTTGTTTCAAGCTCTGTTTCCAGCAGATTCGAACAGACCCACCGGCGATTTGATTAAGACTTTTCAGAAGGAGGATTGGGTTTTAAG mRNA sequence ATGGCTAAGAAAACACACCCGATGCAGAGGTTGAGAGTTTTCTCAATCGTCGGCTTGTTTCAAGCTCTGTTTCCAGCAGATTCGAACAGACCCACCGGCGATTTGATTAAGACTTTTCAGAAGGAGGATTGGGTTTTAAG Coding sequence (CDS) ATGGCTAAGAAAACACACCCGATGCAGAGGTTGAGAGTTTTCTCAATCGTCGGCTTGTTTCAAGCTCTGTTTCCAGCAGATTCGAACAGACCCACCGGCGATTTGATTAAGACTTTTCAGAAGGAGGATTGGGTTTTAAG Protein sequence MAKKTHPMQRLRVFSIVGLFQALFPADSNRPTGDLIKTFQKEDWVL
Homology
BLAST of Csor.00g211170 vs. NCBI nr
Match: KAG6587599.1 (hypothetical protein SDJN03_16164, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 97.8 bits (242), Expect = 1.30e-25 Identity = 46/46 (100.00%), Postives = 46/46 (100.00%), Query Frame = 0
Query: 1 MAKKTHPMQRLRVFSIVGLFQALFPADSNRPTGDLIKTFQKEDWVL 46
MAKKTHPMQRLRVFSIVGLFQALFPADSNRPTGDLIKTFQKEDWVL
Sbjct: 1 MAKKTHPMQRLRVFSIVGLFQALFPADSNRPTGDLIKTFQKEDWVL 46
BLAST of Csor.00g211170 vs. NCBI nr
Match: XP_023531669.1 (uncharacterized protein LOC111793841 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 45.8 bits (107), Expect = 7.19e-04 Identity = 24/43 (55.81%), Postives = 27/43 (62.79%), Query Frame = 0
Query: 1 MAKKTHPMQRLRVFSIVGLFQALFPADSNRPTGDLIKTFQKED 43
MAKK +QRLRV F+ F RPTGDLIKTFQKE+
Sbjct: 1 MAKKHTRLQRLRVSQSSACFKVCFQQIRTRPTGDLIKTFQKEE 43
BLAST of Csor.00g211170 vs. NCBI nr
Match: XP_022933390.1 (uncharacterized protein LOC111440820 [Cucurbita moschata] >KAG7021564.1 hypothetical protein SDJN02_15289, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 45.4 bits (106), Expect = 9.92e-04 Identity = 24/43 (55.81%), Postives = 27/43 (62.79%), Query Frame = 0
Query: 1 MAKKTHPMQRLRVFSIVGLFQALFPADSNRPTGDLIKTFQKED 43
MAKK +QRLRV F+ F RPTGDLIKTFQKE+
Sbjct: 1 MAKKHTRLQRLRVSQSSACFKLCFQQIRTRPTGDLIKTFQKEE 43
BLAST of Csor.00g211170 vs. NCBI nr
Match: KAG6587602.1 (hypothetical protein SDJN03_16167, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 45.4 bits (106), Expect = 9.92e-04 Identity = 24/43 (55.81%), Postives = 27/43 (62.79%), Query Frame = 0
Query: 1 MAKKTHPMQRLRVFSIVGLFQALFPADSNRPTGDLIKTFQKED 43
MAKK +QRLRV F+ F RPTGDLIKTFQKE+
Sbjct: 1 MAKKHTRLQRLRVSQSSACFKLCFQQIRTRPTGDLIKTFQKEE 43
BLAST of Csor.00g211170 vs. ExPASy TrEMBL
Match: A0A6J1F4R8 (uncharacterized protein LOC111440820 OS=Cucurbita moschata OX=3662 GN=LOC111440820 PE=4 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 4.80e-04 Identity = 24/43 (55.81%), Postives = 27/43 (62.79%), Query Frame = 0
Query: 1 MAKKTHPMQRLRVFSIVGLFQALFPADSNRPTGDLIKTFQKED 43
MAKK +QRLRV F+ F RPTGDLIKTFQKE+
Sbjct: 1 MAKKHTRLQRLRVSQSSACFKLCFQQIRTRPTGDLIKTFQKEE 43
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
|---|
| KAG6587599.1 | 1.30e-25 | 100.00 | hypothetical protein SDJN03_16164, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| XP_023531669.1 | 7.19e-04 | 55.81 | uncharacterized protein LOC111793841 [Cucurbita pepo subsp. pepo] | [more] |
| XP_022933390.1 | 9.92e-04 | 55.81 | uncharacterized protein LOC111440820 [Cucurbita moschata] >KAG7021564.1 hypothet... | [more] |
| KAG6587602.1 | 9.92e-04 | 55.81 | hypothetical protein SDJN03_16167, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1F4R8 | 4.80e-04 | 55.81 | uncharacterized protein LOC111440820 OS=Cucurbita moschata OX=3662 GN=LOC1114408... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
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