Csor.00g211040 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g211040
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr04: 14942555 .. 14942914 (-)
RNA-Seq ExpressionCsor.00g211040
SyntenyCsor.00g211040
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAAGAAGATGGTGAAAATAGAAAACAGGGCATTTTCATGCTGGTTTCACAATGAAAAACATGGGGAATATACCAAAATCAAAGAAAAGCACATTGGGAGATTCTTTAAAGTTACCGTCGAAGAAATAGTGTTTTGGCCTGTCGACATCCTTGAAGATTTGCTCTTAGCCCCTCCTTCTCTAAGAGTTTTCAGGAAACCTGTATGCAATGGGAGATTCATCTGGTTGCATAGAATAAAGAATAAGAGGGGTAGTTTCATTCAAGTCACAAAGGTGCAAAGTTCAGGCGGCAAGGGAACATTGTACCTCCTTTGGATGATGATGTCAAAGGTTGGGAACCCTTCAGATCTCCCTTGA

mRNA sequence

ATGGAAAAGAAGATGGTGAAAATAGAAAACAGGGCATTTTCATGCTGGTTTCACAATGAAAAACATGGGGAATATACCAAAATCAAAGAAAAGCACATTGGGAGATTCTTTAAAGTTACCGTCGAAGAAATAGTGTTTTGGCCTGTCGACATCCTTGAAGATTTGCTCTTAGCCCCTCCTTCTCTAAGAGTTTTCAGGAAACCTGTATGCAATGGGAGATTCATCTGGTTGCATAGAATAAAGAATAAGAGGGGTAGTTTCATTCAAGTCACAAAGGTGCAAAGTTCAGGCGGCAAGGGAACATTGTACCTCCTTTGGATGATGATGTCAAAGGTTGGGAACCCTTCAGATCTCCCTTGA

Coding sequence (CDS)

ATGGAAAAGAAGATGGTGAAAATAGAAAACAGGGCATTTTCATGCTGGTTTCACAATGAAAAACATGGGGAATATACCAAAATCAAAGAAAAGCACATTGGGAGATTCTTTAAAGTTACCGTCGAAGAAATAGTGTTTTGGCCTGTCGACATCCTTGAAGATTTGCTCTTAGCCCCTCCTTCTCTAAGAGTTTTCAGGAAACCTGTATGCAATGGGAGATTCATCTGGTTGCATAGAATAAAGAATAAGAGGGGTAGTTTCATTCAAGTCACAAAGGTGCAAAGTTCAGGCGGCAAGGGAACATTGTACCTCCTTTGGATGATGATGTCAAAGGTTGGGAACCCTTCAGATCTCCCTTGA

Protein sequence

MEKKMVKIENRAFSCWFHNEKHGEYTKIKEKHIGRFFKVTVEEIVFWPVDILEDLLLAPPSLRVFRKPVCNGRFIWLHRIKNKRGSFIQVTKVQSSGGKGTLYLLWMMMSKVGNPSDLP
Homology
BLAST of Csor.00g211040 vs. NCBI nr
Match: KAG6601809.1 (hypothetical protein SDJN03_07042, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 254 bits (649), Expect = 1.79e-85
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0

Query: 1   MEKKMVKIENRAFSCWFHNEKHGEYTKIKEKHIGRFFKVTVEEIVFWPVDILEDLLLAPP 60
           MEKKMVKIENRAFSCWFHNEKHGEYTKIKEKHIGRFFKVTVEEIVFWPVDILEDLLLAPP
Sbjct: 1   MEKKMVKIENRAFSCWFHNEKHGEYTKIKEKHIGRFFKVTVEEIVFWPVDILEDLLLAPP 60

Query: 61  SLRVFRKPVCNGRFIWLHRIKNKRGSFIQVTKVQSSGGKGTLYLLWMMMSKVGNPSDLP 119
           SLRVFRKPVCNGRFIWLHRIKNKRGSFIQVTKVQSSGGKGTLYLLWMMMSKVGNPSDLP
Sbjct: 61  SLRVFRKPVCNGRFIWLHRIKNKRGSFIQVTKVQSSGGKGTLYLLWMMMSKVGNPSDLP 119

BLAST of Csor.00g211040 vs. NCBI nr
Match: XP_031737554.1 (transcription factor Pur-alpha 1-like [Cucumis sativus])

HSP 1 Score: 85.9 bits (211), Expect = 1.92e-18
Identity = 38/98 (38.78%), Postives = 58/98 (59.18%), Query Frame = 0

Query: 6   VKIENRAFSCWFHNEKHGEYTKIKEKHIGRFFKVTVEEIVF-WPVDILEDLLLAPPSLRV 65
            KIEN++FSC F     G   ++ E H+ + + +  EE +F W  + LE++L      + 
Sbjct: 9   TKIENKSFSCEFDANSRGRVIRLTEAHLNKSYTLLGEETLFGWLAESLEEVLQTSKPQKF 68

Query: 66  FRKPVCNGRFIWLHRIKNKRGSFIQVTKVQSSGGKGTL 102
           FRK  CNG F W+ +  NKRGSF++++KV  SG KG +
Sbjct: 69  FRKTFCNGGFTWIQKTTNKRGSFLEISKVLKSGKKGNI 106

BLAST of Csor.00g211040 vs. ExPASy TrEMBL
Match: A0A0A0L427 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G572310 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.22e-10
Identity = 31/62 (50.00%), Postives = 42/62 (67.74%), Query Frame = 0

Query: 42  EEIVF-WPVDILEDLLLAPPSLRVFRKPVCNGRFIWLHRIKNKRGSFIQVTKVQSSGGKG 101
           EEI+F W VD LE++L  P S + FR+  CNG F W+    NKRGSF++++KV  SG KG
Sbjct: 281 EEILFVWLVDSLEEVLQTPKSDKFFRETFCNGGFSWIQETTNKRGSFLEISKVLKSGKKG 340

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6601809.11.79e-85100.00hypothetical protein SDJN03_07042, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_031737554.11.92e-1838.78transcription factor Pur-alpha 1-like [Cucumis sativus][more]
Match NameE-valueIdentityDescription
A0A0A0L4271.22e-1050.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G572310 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g211040.m01Csor.00g211040.m01mRNA