Csor.00g210640 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g210640
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Unknown protein
Location	Csor_Chr20: 7072301 .. 7072600 (-)
RNA-Seq Expression	Csor.00g210640
Synteny	Csor.00g210640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAAGCCGAGAAAGCACGTTGCAGGCGTGTGTTTGCGGGATCGGTGTTGGGCTGAAACAAAGGTGTCTCGTGTTCGTTTGTGTGTTGGGTCAAAGGTCGAACGTGAAACCTAACCCGAATCTTACCCGTTGTCTTTCTTACCCGCTAGCCAATGAAACCGTAATCAATGATGCCGCCTTCCCCGTCTGTGTGTTGGGTCAAAGGCCAAACGGTCATGCAACGCCTTTGAAGGTCACACAACGCACCTTCTTCGATTCTGACAATCAACCTTCTTTCGACGGGCACGAGGCGACATGA

mRNA sequence

ATGCAAAGCCGAGAAAGCACGTTGCAGGCGTGTGTTTGCGGGATCGGTGTTGGGCTGAAACAAAGGTGTCTCGTGTTCGTTTGTGTGTTGGGTCAAAGGTCGAACGTGAAACCTAACCCGAATCTTACCCGTTGTCTTTCTTACCCGCTAGCCAATGAAACCGTAATCAATGATGCCGCCTTCCCCGTCTGTGTGTTGGGTCAAAGGCCAAACGGTCATGCAACGCCTTTGAAGGTCACACAACGCACCTTCTTCGATTCTGACAATCAACCTTCTTTCGACGGGCACGAGGCGACATGA

Coding sequence (CDS)

ATGCAAAGCCGAGAAAGCACGTTGCAGGCGTGTGTTTGCGGGATCGGTGTTGGGCTGAAACAAAGGTGTCTCGTGTTCGTTTGTGTGTTGGGTCAAAGGTCGAACGTGAAACCTAACCCGAATCTTACCCGTTGTCTTTCTTACCCGCTAGCCAATGAAACCGTAATCAATGATGCCGCCTTCCCCGTCTGTGTGTTGGGTCAAAGGCCAAACGGTCATGCAACGCCTTTGAAGGTCACACAACGCACCTTCTTCGATTCTGACAATCAACCTTCTTTCGACGGGCACGAGGCGACATGA

Protein sequence

MQSRESTLQACVCGIGVGLKQRCLVFVCVLGQRSNVKPNPNLTRCLSYPLANETVINDAAFPVCVLGQRPNGHATPLKVTQRTFFDSDNQPSFDGHEAT

Homology

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BLAST of Csor.00g210640 vs. NCBI nr
Match: KAG6571262.1 (hypothetical protein SDJN03_30177, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 208 bits (530), Expect = 5.87e-68
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1  MQSRESTLQACVCGIGVGLKQRCLVFVCVLGQRSNVKPNPNLTRCLSYPLANETVINDAA 60
          MQSRESTLQACVCGIGVGLKQRCLVFVCVLGQRSNVKPNPNLTRCLSYPLANETVINDAA
Sbjct: 1  MQSRESTLQACVCGIGVGLKQRCLVFVCVLGQRSNVKPNPNLTRCLSYPLANETVINDAA 60

Query: 61 FPVCVLGQRPNGHATPLKVTQRTFFDSDNQPSFDGHEAT 99
          FPVCVLGQRPNGHATPLKVTQRTFFDSDNQPSFDGHEAT
Sbjct: 61 FPVCVLGQRPNGHATPLKVTQRTFFDSDNQPSFDGHEAT 99

The following BLAST results are available for this feature:

BLAST of Csor.00g210640 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g210640 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6571262.1	5.87e-68	100.00	hypothetical protein SDJN03_30177, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Csor.00g210640 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Csor.00g210640 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g210640.m01	Csor.00g210640.m01	mRNA