Csor.00g210020 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTGCTCAAGGACTCGAGAAGCGTCCGTTGAAAGAGTTGGCATCTGAGATCACTAGTTGCCAATTCAATTGTGTTCGATTAACTTGGTCTGTTCGTATGTTTACTCGTTACGCATATGAGACTATTGGTGATGTTTTAGATGGTCTAGATATTGCCGATGAAAAGCACAACTCTGAGATATTGAAAGTGACTGTTACTAAGGCATTCCAAACTGTTATTAATGGTTGTGGCGCTGAAGGCGTCATGGTTATTTTAGATAACCATATTAGTCAGCTGAGGTGTTAAGAATGAGAAATAGAAATAGAATTGGGATCGAAAGTATGATCTTCATTCATGCTTACCACGTTTAAATAGGATAGAAACTATCAACTAATACCTAAAAATAGGAAAAAAATAGGAAAAATATATAACTAACTAAATCTTGTAAATAAATAAAATAATACGGTCAATCAAATCTAAGATAAAATATACAACTAACAACTCCCAAAATATTTCAATATACTCCTAACTAATTATTAAAATATATCTCCAAATATCATATCTTAATACTCCCCTCAAGTTGGAGAGTGTATGTCAATCACACCCAACTTGTCCTTCAAAAAATCAAACTAATGTCCTCCCAAAGCTTTAGTAAAAACATTTGCCAATTGCATTTTATTCGAAACATAACTCGGTTTGATGATTCCAGCTTGTAACTTTTCTCGAACTATATAACAATCTATTTCAATGTGTTTCGTACGTTCGTGAAAAATTGGATTGGCTGCTACATGTAATGCTGCTTGATTATCACAATATAATAATGCTGGTTCGGACAGTGGAACATTCAAGTCTTGAAGAATGTATCTAAATCAAGTTAACTCTAAACAAGTATTTTCCATAGCTCGATACTCGAGTTCTGCTGATGATATGGACACATTAGTCTGCTTTTTAGACTTCCAAGAAATAATTGAATTTCCAAGGAAAATGCAGAACCCAGAAATAGATCGTCTGGAAGTTCGACAACCACCCCAGTAAGAATCGCAATATGCTTGTAATCTTAAATTGTTTTCAGATGGTAGCAAGAGTCCTTGACCAGGAGTGCCTTTGATGTATCTCAGAACTCGAAGAGTTGCCTCCCAATGTGGTTTTCTTGGTTCATGCATAAATTGGCTAAGTATGCGAACTGAATAAGCTATGTCAGGCCTAGTGACGGTCAAATATATTAATCTTCCAATCAACCGTCTGTATTTACTTGGATCATTCAACTTCTCTACATCAGTTAAAGAAAGTTTCAGATTTTGCTCCATAGGAAATTTGTCTGGACGTGCTCCTATAAGACCTGTGTCTTGAAGAATGCCTAGAGCATACTTCCTTTGAGACATAAAAATTCCTTTTCTAGACCGAGAAAATTCAATGCCTAGAAAATATTTCAAATTTCCTAAATCTCTGATAAGAAATTTCTGGAGTAAACTAGTCTTGAGATATTAAATTTCTTTTAGATCGTTGCCTGTCAACAGAATATCATCAACATAGATTAGAACTGCAGTGAAAGAAGTACCTTTGCTCTTAGTAAATAAAGAGTAATCTGCTTTGGACTGAGTGTAGCCTGCTTTTTGTATAGTTGTAGAAAATATGGAGAACCAATTGCGAGAAGCCTGTTTTAATCCATAAAGAGATTTATGGAGCCGATATACTGTATTCTCCCGCTGTCGGCGAAGACCTGGTGGTAAAGACATATAGACTTCCTCGTCTAGATTGCCATGGAGAAAGGAATTTTGAACATCCAATTGATGGGTGAACCATTTTCAAGCAGCAGCAACAGTGAGTAAGCAACGAAGTGTAGTAAGTTTCGCTGTAGGAGAAAATGTTTTTGTGTAAACAATACCTTCAATCTGAGTGTACCCCTTTGCTACAAGTCGAGCTTTATAAGGTTCAACAGAACCATCAGAGTTGTATTTAATTTTGTACACCCAATGACAACCAATAACTTTATGACCAGGTGGTAGAGGAACTAGAGATCATGTATGATTACGTTCCAAAGCTGCAATTTCATCATTCATAGCCTGCTGCCATAACGAGTCGCCAACTGCCTCGTCATAGGTTTTAGGTTCTGTCTGGGATGTAATAAGAACTAGAAAAGCACGTTGAGTAGGAGAAAAACAAGAGAATGAAAGGTAATGATGAAGGGGATACCTGGTGCTAGTGTTCGGACTTGAGCTAGAGGTTAAATGATTGGCTCCGGAAGACATCTCATAATCCTTTTGTCAAGCTGGAGGCTGTTTAGTACGAGTAGAACATCGTAGTGGAGCTGATGTATCAGGTGGGATAGGATTAAAATTAGTGGGCAAATCTGGAGAAGGTGGAGGAGACGACGAAGTAGTAGGTGAAGGAGGAATAGGAGGTGAAGGAATAGAAGGTGGAGAATGGATGTTTGAGTAGGATGGATCATGAAGTGGTACAACATGAGTCGAAGGAGCTAATGTCAAAGTTTGTGAAGCTGATGAAAAAGGAAAATCATCTTCACAAATTTAACATCACGACTGATAAAGAATTTGTGACGAGATTGCATGTCATACAACTTGTAACCTTTATGACCACAAGGATATCCTACGAAAACACAAGGAATTGCCCGAGGTTCAAATTTTTTTCTTAGGATGTACTATAGTTGCATAACATTTACAACAAAAATCTTTAAGATGATGAAATGTAGGTGGTCGTTTGTAGAGTGCTTCAAAGGGTGTCTTCTTAGATAACAATGGTGACGGCATTCTATTTATAAGATAAACAGCCGTTAAAATGCACTCTCCCCAAAAATTAAGTGGAATCTGTGACTAAAACAGAAGAGACCTAGCTACATTTAGGATATGGCGATACTTACGTTCTACGACTCCATTTTGTTGTGGAGTACAGACACAAGTGTGCTGAAGTTCAATGCCACAAGAAGTAAAGAATGGTTGCAAAGATAGGAACTCAGTTCCATTGTCTGATCGAACTATCTTGATAGTAGTATAAAATTGAGTTTGAACGAATTTAACAAAGTTCATTAACAAATGATGTACTTCTGACTTATGTTGCATTAGAAAAACCCAAGTACATCGAGCAAAATCATCAACAATAGTGAGAAAAAAAACGCAAACCAGAATGGGTAGGAATTTTATGTGGTCCCCAAACATCACAATGTATCAGATCAAAGGCAGAATGGGTTGTTATTGAACTTCTTGGGAAAGACAACCTAGTTTGTTTTGCTAACAGGCAGATACTACAATTATGAGAATAACTCGCATTATTAAGATACAATTGATCAGCTAGAAATTTAAAACGAGAAAAAGAAGGATGACCTAGGCGTAAATGCCACAAATCAGATGACTAAGATACTTGATGAGCTGAAGATTTGAATGGAGATGAAGAAATATGATAGAAACCTCCAACTTGTTTACCCGAGCCAATCATCTTCCCCGTAGTCAAGTCCTGCATAACACAAGAATCAGGATAGAAGGTGACATAACATTTCAAGTTATTCGTAAGTTTGCTGATGGACATTAGGTTTAAATTGAATAAAGGCACACATAAAACGTTGTTAATTTAAGGTTAGGGCTAAGGGAAATATTGCCAGTATGTGACACACGTGCCGTCTCTCCATTCTACAAATTTATTGTAGACATGACGGCAGCCTTTGGTTCAGTCATAACAGAAGATTTTGATACTGTATGATCCGTAGCTCCACTATCGAGAATCCATGAATTAGAACTTGCAGAGTTAATAGATAATGTAGATATGGGAAACAAACTTGCAACATTGATATGATTGTTAGAATTACCAGAAGGGTGATGATTGATTGCAGATAAGGCTTGTGCTATCTGTTGTAATTGCTCAGAAGAAAAATTTGGAATGGAATTAGGTGACTGTTCTTCTGTATTCAACTGAAAAACATCGGCCATATTTACAGATGATCGATATCCACGATTATTGTGTTGATTGACTTGTCTTGTCCTTCCAGAATTATTTTTCTGTCGACACCGATCTTTTGTATGTCCCCTTCTATCACAAAACTTACAGTGAAACTTAAGGATTTGACACTCATTGATTGTATGCCCACTTTTATTGCAGTGTTCACACGATTTGTCCTTGGCGAATTTTGAATATGTTGTTTTCTTCTACACTGCTGATGCAATCGAGAAATTCTCAGCAGGTTCAGAAGTTACCTGACGATGCATCTCTTCTTGTACAAGTATACGAATAGGCTTGCCTCACATTAGGTAATGGAGACATCATCAATATGTTAGATCTCACCGTTTTATAAGACTCGTTGAGCCCCATGAGCAATTGCATCAACTTGTCTTCTTCGCGTTGATCAATATGTATTTGACGTTGATTACAGGTAAATGGTGTGCGGTACGCTTCCAGCTCATCTCAGAGTGCTTTGAGCTTGGTGAAATATGTTGACAGTGCCATGGTTCCTTGTGACATCGTTGCTATCGAGTTTTGTATCTGAAAAATTGCTGGAGCATTCTTTTGTGAGAATTGATCATGAAGATCAACCCACACTTGATGAGCTGTCTTGGCGTGAATAATGCCTTTAGCGATATCTGCTTCAACGGAATGAGATAACCAAGATATTATCATACTGTTGCATTGATTCCAGAGTTCAAATTCGGTTGAATTTGCATCTTGGGACGGTTCTTCAATTGTGCCATCAATGAAGCCAATTTTCTTCTTGGCAATAAGAGCATGCATGACTGATTTACTCCAGGATTGGTAATTTACTCCATTTAATTTGATTGGAACAAGTGAATATCGTGGCTGATCAGAGTGATGAATATAGTAAGGATGTGTTAAATCAACATCTCAAATTTTGAAGCAGGATTTCGCTGATTCCGCCATAAAGAAAATTTTGATATTTAAGAACACCAAGATCGGTGCTCTGATACCATGTTAAGAATGAGTAATAGAAATAAAATTGGGATCGAAAGTATGATCTTCATTCATTTTTACCACGTTTAAATAGGATACAAACTATCAACTAATACCTAAAAATAGGAAAAATATATAACTAACTAAACCTTGTAAATAAATAAAATATACGTTAATCAAATCTAAGATAAAATATACTACTAACAACTCCCAAAATATCTCAGATATACTCCTAACTAATTATTAAAATATATCTCCAAATATCATATCTTAATACGAGGTGGTGGTGCTCTCTCGATGATGGTGCTCTCTCGATGATGGCAATGGTTTCTTTGGAGATCGCAATTTCAACCCTAATGAATGGCTTCAAGGCTTGTCATTTGTTGCTGTGCAGTTCACTTGTAACCCACATGTGAGTTTTATGCATTTTTAATGGGTGTATTTTCACGATATTTATATCATATTCTAATTTTTATTTTTCCTTTGTAAAGGGTGATAGGAATGAGTCTAAGAAACGAGCTTGGAGGGTCATTTACAAACAATGATGCTTGGTGTTATTACCTGAGAAAAGGAAGCCTACTAATCCATAGAACAAGCCCAAATCTTCTCCTAATCATTTATGGATTAAACTATGACAATGATTTAAGCCACATAAAGAAAAGGCCACTAGGCTATACCTTACAAACCAAAGTAGCGTTGGAGGCACATCCCTACTCGTTTAGTGGGGATAACGAAAGAAAATTTGTGAAGAAGCCATTAAACATAATATGCAACGAAATTATGGAGAAGTTTGAACGGGAAGCTGGTTTCGTGGTGGACATGGAGAATCCATATCCTTTGTTCCTTAGTGAATTTGGGTATGATCAATCGGGGGGCAATGAGGCTGAGAATCGGTTCATGAGATTCTTTTTGGCTCGAATTATCGGGAAGGATATTGATTGGGGCTTGTAG ATGGTTGCTCAAGGACTCGAGAAGCGTCCGTTGAAAGAGTTGGCATCTGAGATCACTAGTTGCCAATTCAATTGTGTTCGATTAACTTGGTCTGTTCGTATGTTTACTCGTTACGCATATGAGACTATTGGTGATGTTTTAGATGGTCTAGATATTGCCGATGAAAAGCACAACTCTGAGATATTGAAAGTGACTGTTACTAAGGCATTCCAAACTGTTATTAATGGTTGTGGCGCTGAAGGCGTCATGAAAAGGCCACTAGGCTATACCTTACAAACCAAAGTAGCGTTGGAGGCACATCCCTACTCGTTTAGTGGGGATAACGAAAGAAAATTTGTGAAGAAGCCATTAAACATAATATGCAACGAAATTATGGAGAAGTTTGAACGGGAAGCTGGTTTCGTGGTGGACATGGAGAATCCATATCCTTTGTTCCTTAGTGAATTTGGGTATGATCAATCGGGGGGCAATGAGGCTGAGAATCGGTTCATGAGATTCTTTTTGGCTCGAATTATCGGGAAGGATATTGATTGGGGCTTGTAG ATGGTTGCTCAAGGACTCGAGAAGCGTCCGTTGAAAGAGTTGGCATCTGAGATCACTAGTTGCCAATTCAATTGTGTTCGATTAACTTGGTCTGTTCGTATGTTTACTCGTTACGCATATGAGACTATTGGTGATGTTTTAGATGGTCTAGATATTGCCGATGAAAAGCACAACTCTGAGATATTGAAAGTGACTGTTACTAAGGCATTCCAAACTGTTATTAATGGTTGTGGCGCTGAAGGCGTCATGAAAAGGCCACTAGGCTATACCTTACAAACCAAAGTAGCGTTGGAGGCACATCCCTACTCGTTTAGTGGGGATAACGAAAGAAAATTTGTGAAGAAGCCATTAAACATAATATGCAACGAAATTATGGAGAAGTTTGAACGGGAAGCTGGTTTCGTGGTGGACATGGAGAATCCATATCCTTTGTTCCTTAGTGAATTTGGGTATGATCAATCGGGGGGCAATGAGGCTGAGAATCGGTTCATGAGATTCTTTTTGGCTCGAATTATCGGGAAGGATATTGATTGGGGCTTGTAG MVAQGLEKRPLKELASEITSCQFNCVRLTWSVRMFTRYAYETIGDVLDGLDIADEKHNSEILKVTVTKAFQTVINGCGAEGVMKRPLGYTLQTKVALEAHPYSFSGDNERKFVKKPLNIICNEIMEKFEREAGFVVDMENPYPLFLSEFGYDQSGGNEAENRFMRFFLARIIGKDIDWGL Homology
BLAST of Csor.00g210020 vs. ExPASy Swiss-Prot
Match: C0HLA0 (Glycosyl hydrolase 5 family protein OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 5.1e-08 Identity = 34/97 (35.05%), Postives = 49/97 (50.52%), Query Frame = 0
HSP 2 Score: 51.2 bits (121), Expect = 1.4e-05 Identity = 29/87 (33.33%), Postives = 46/87 (52.87%), Query Frame = 0
BLAST of Csor.00g210020 vs. NCBI nr
Match: KAG6592302.1 (hypothetical protein SDJN03_14648, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 372 bits (954), Expect = 5.39e-130 Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0
BLAST of Csor.00g210020 vs. NCBI nr
Match: XP_022954182.1 (uncharacterized protein LOC111456519 [Cucurbita moschata]) HSP 1 Score: 271 bits (694), Expect = 2.41e-86 Identity = 156/289 (53.98%), Postives = 165/289 (57.09%), Query Frame = 0
BLAST of Csor.00g210020 vs. NCBI nr
Match: XP_022990540.1 (uncharacterized protein LOC111487386 [Cucurbita maxima]) HSP 1 Score: 269 bits (688), Expect = 1.93e-85 Identity = 155/289 (53.63%), Postives = 163/289 (56.40%), Query Frame = 0
BLAST of Csor.00g210020 vs. NCBI nr
Match: XP_023527621.1 (uncharacterized protein LOC111790789 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 268 bits (686), Expect = 3.86e-85 Identity = 155/289 (53.63%), Postives = 163/289 (56.40%), Query Frame = 0
BLAST of Csor.00g210020 vs. NCBI nr
Match: KAG6601845.1 (hypothetical protein SDJN03_07078, partial [Cucurbita argyrosperma subsp. sororia] >KAG6601853.1 hypothetical protein SDJN03_07086, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 270 bits (689), Expect = 5.61e-85 Identity = 156/289 (53.98%), Postives = 163/289 (56.40%), Query Frame = 0
BLAST of Csor.00g210020 vs. ExPASy TrEMBL
Match: A0A6J1GQA8 (Mannan endo-1,4-beta-mannosidase OS=Cucurbita moschata OX=3662 GN=LOC111456519 PE=3 SV=1) HSP 1 Score: 271 bits (694), Expect = 1.17e-86 Identity = 156/289 (53.98%), Postives = 165/289 (57.09%), Query Frame = 0
BLAST of Csor.00g210020 vs. ExPASy TrEMBL
Match: A0A6J1JQD4 (Mannan endo-1,4-beta-mannosidase OS=Cucurbita maxima OX=3661 GN=LOC111487386 PE=3 SV=1) HSP 1 Score: 269 bits (688), Expect = 9.35e-86 Identity = 155/289 (53.63%), Postives = 163/289 (56.40%), Query Frame = 0
BLAST of Csor.00g210020 vs. ExPASy TrEMBL
Match: A0A6J1GZR4 (Mannan endo-1,4-beta-mannosidase OS=Cucurbita moschata OX=3662 GN=LOC111459103 PE=3 SV=1) HSP 1 Score: 266 bits (679), Expect = 2.11e-84 Identity = 153/289 (52.94%), Postives = 161/289 (55.71%), Query Frame = 0
BLAST of Csor.00g210020 vs. ExPASy TrEMBL
Match: A0A6J1H0Z1 (Mannan endo-1,4-beta-mannosidase OS=Cucurbita moschata OX=3662 GN=LOC111459153 PE=3 SV=1) HSP 1 Score: 265 bits (678), Expect = 2.98e-84 Identity = 153/289 (52.94%), Postives = 162/289 (56.06%), Query Frame = 0
BLAST of Csor.00g210020 vs. ExPASy TrEMBL
Match: A0A6J1K7T8 (Mannan endo-1,4-beta-mannosidase OS=Cucurbita maxima OX=3661 GN=LOC111491432 PE=3 SV=1) HSP 1 Score: 264 bits (675), Expect = 8.43e-84 Identity = 153/289 (52.94%), Postives = 161/289 (55.71%), Query Frame = 0
BLAST of Csor.00g210020 vs. TAIR 10
Match: AT3G26130.1 (Cellulase (glycosyl hydrolase family 5) protein ) HSP 1 Score: 79.7 bits (195), Expect = 2.6e-15 Identity = 75/296 (25.34%), Postives = 102/296 (34.46%), Query Frame = 0
BLAST of Csor.00g210020 vs. TAIR 10
Match: AT5G17500.1 (Glycosyl hydrolase superfamily protein ) HSP 1 Score: 77.4 bits (189), Expect = 1.3e-14 Identity = 39/96 (40.62%), Postives = 56/96 (58.33%), Query Frame = 0
BLAST of Csor.00g210020 vs. TAIR 10
Match: AT5G16700.1 (Glycosyl hydrolase superfamily protein ) HSP 1 Score: 76.3 bits (186), Expect = 2.9e-14 Identity = 68/293 (23.21%), Postives = 102/293 (34.81%), Query Frame = 0
BLAST of Csor.00g210020 vs. TAIR 10
Match: AT3G26140.1 (Cellulase (glycosyl hydrolase family 5) protein ) HSP 1 Score: 63.9 bits (154), Expect = 1.5e-10 Identity = 34/99 (34.34%), Postives = 48/99 (48.48%), Query Frame = 0
HSP 2 Score: 45.4 bits (106), Expect = 5.5e-05 Identity = 27/95 (28.42%), Postives = 50/95 (52.63%), Query Frame = 0
BLAST of Csor.00g210020 vs. TAIR 10
Match: AT1G13130.1 (Cellulase (glycosyl hydrolase family 5) protein ) HSP 1 Score: 62.8 bits (151), Expect = 3.3e-10 Identity = 32/99 (32.32%), Postives = 47/99 (47.47%), Query Frame = 0
HSP 2 Score: 52.4 bits (124), Expect = 4.5e-07 Identity = 28/93 (30.11%), Postives = 52/93 (55.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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