Csor.00g209630 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g209630
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr05: 8815772 .. 8816490 (-)
RNA-Seq ExpressionCsor.00g209630
SyntenyCsor.00g209630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGAACCAATCTTCGGCGGACAAATCAATGGCGTTTGTCGCATATGTTCGCAAGTCGAAGAATCTGGCTATGGCTATCCATGGTAAGAAGCTGGATATTTTCTCAGGTAACTATTCAGACTCTGCCACTTTTCATTTTCAGATTTCCAGTCTCGATAATAGAAGCGTAATGGTGTTTTCTGGCTGAATTCGATCCCCGAATCTCTGTTTTTTTTTTAGTGGATTGGAAAATTAGGGAAAATTTTAGCTAGTTAGGGTTGTTGATGAGAATTAGCTGGTATCGCTATCAGGTGGATCATCCGTCCTTTTGTGAATTTCTACTTTGTTAGGTCATCTAACTTGGTCTCTTTTTCATTTTCATTTATATTAACACTCGTGATGGGGTAAAGTGGAGCAGTTTCGAAGAACATTCGAGTGTAGTGTTTAGTAAAAGTTTAGAGGATCAACTTCAAAACGGATTAATTTAGTTTTCTTTTTCTAGCTTTTGTTGTTCTTGGAATTAAATTTGAGCACACACTTAATGAAGTTTTGAAAAAAGAAGATTACATTTTCTTGAAACAGTTTTTGGTGACTCTGAGAGGTATTGAAAATTTTGATACAGCGCCCGAAATCGTTAGTGAGTTCGAATGAAGCTCGAAAAATCCTCATAAGAAGTAGTGTTAGATTCTGCTTCCTCAAATGCCAACCATTCTTCAGCGGGCAATTCAATGGCGTTTGA

mRNA sequence

ATGCGAACCAATCTTCGGCGGACAAATCAATGGCGTTTGTCGCATATGTTCGCAAGTCGAAGAATCTGGCTATGGCTATCCATGGTAAGAAGCTGGATATTTTCTCAGCGCCCGAAATCGTTAGTGAGTTCGAATGAAGCTCGAAAAATCCTCATAAGAAGTAGTGTTAGATTCTGCTTCCTCAAATGCCAACCATTCTTCAGCGGGCAATTCAATGGCGTTTGA

Coding sequence (CDS)

ATGCGAACCAATCTTCGGCGGACAAATCAATGGCGTTTGTCGCATATGTTCGCAAGTCGAAGAATCTGGCTATGGCTATCCATGGTAAGAAGCTGGATATTTTCTCAGCGCCCGAAATCGTTAGTGAGTTCGAATGAAGCTCGAAAAATCCTCATAAGAAGTAGTGTTAGATTCTGCTTCCTCAAATGCCAACCATTCTTCAGCGGGCAATTCAATGGCGTTTGA

Protein sequence

MRTNLRRTNQWRLSHMFASRRIWLWLSMVRSWIFSQRPKSLVSSNEARKILIRSSVRFCFLKCQPFFSGQFNGV
Homology
[Close]
BLAST of Csor.00g209630 vs. NCBI nr
Match: KAG6599181.1 (hypothetical protein SDJN03_08959, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 154 bits (389), Expect = 3.19e-47
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0 

Query: 1  MRTNLRRTNQWRLSHMFASRRIWLWLSMVRSWIFSQRPKSLVSSNEARKILIRSSVRFCF 60
          MRTNLRRTNQWRLSHMFASRRIWLWLSMVRSWIFSQRPKSLVSSNEARKILIRSSVRFCF
Sbjct: 1  MRTNLRRTNQWRLSHMFASRRIWLWLSMVRSWIFSQRPKSLVSSNEARKILIRSSVRFCF 60

Query: 61 LKCQPFFSGQFNGV 74
          LKCQPFFSGQFNGV
Sbjct: 61 LKCQPFFSGQFNGV 74

The following BLAST results are available for this feature:
BLAST of Csor.00g209630 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g209630 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6599181.13.19e-47100.00hypothetical protein SDJN03_08959, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g209630 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g209630 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g209630.m01Csor.00g209630.m01mRNA