Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGAATCAGGAAATGCTGAGAATCATCTCTCAGATGTTGGTTGTAGTGGTGTTAATGACGATGGTGATGATGAAGACGATGAGCGTCGTAAAAGTATGGCGAAGGCCCAAATTATCGCGCCTGATTTGGGTAAACAGAAGGGTTTTGGAAAGGCGAAACGAGTGATGTTGTATCCATTTCGAAAGGCGAAGAAACAGATTCTTCGGCGGAGGATTAAGAGAGATTCTTCTTCTTGTTCTTCTTCTTCTTCTGTTGATTGTACTAGAAGAACAAGTTCTTCCGATAAAAGGGTTTTTGATGGAAGCGTTAATCAGGGCTGTGGTTTCTGTTTCATGAAACTTTCAATTTCAGATTCTAAGAATGGGCCTCCGACTGATCCTAATCACCGGAAGTTCAGTAATGAAATGTTGAAAGTTCTTATTGAGAAGAATGATTTCTATTCCAAGGAATCCAATCCTCACTTGGGTATTCATTCATCTTTCCTGTTCTTAATTAAACTTGATAGTTCATGAAGTTTGATGATATTGCTATGGTTTTTGTTTGTAGATGTTCATATGGGCACTGGAAGAAAACATTAA
mRNA sequence
ATGTTGGAATCAGGAAATGCTGAGAATCATCTCTCAGATGTTGGTTGTAGTGGTGTTAATGACGATGGTGATGATGAAGACGATGAGCGTCGTAAAAGTATGGCGAAGGCCCAAATTATCGCGCCTGATTTGGGTAAACAGAAGGGTTTTGGAAAGGCGAAACGAGTGATGTTGTATCCATTTCGAAAGGCGAAGAAACAGATTCTTCGGCGGAGGATTAAGAGAGATTCTTCTTCTTGTTCTTCTTCTTCTTCTGTTGATTGTACTAGAAGAACAAGTTCTTCCGATAAAAGGGTTTTTGATGGAAGCGTTAATCAGGGCTGTGGTTTCTGTTTCATGAAACTTTCAATTTCAGATTCTAAGAATGGGCCTCCGACTGATCCTAATCACCGGAAGTTCAGTAATGAAATGTTGAAAGTTCTTATTGAGAAGAATGATTTCTATTCCAAGGAATCCAATCCTCACTTGGATGTTCATATGGGCACTGGAAGAAAACATTAA
Coding sequence (CDS)
ATGTTGGAATCAGGAAATGCTGAGAATCATCTCTCAGATGTTGGTTGTAGTGGTGTTAATGACGATGGTGATGATGAAGACGATGAGCGTCGTAAAAGTATGGCGAAGGCCCAAATTATCGCGCCTGATTTGGGTAAACAGAAGGGTTTTGGAAAGGCGAAACGAGTGATGTTGTATCCATTTCGAAAGGCGAAGAAACAGATTCTTCGGCGGAGGATTAAGAGAGATTCTTCTTCTTGTTCTTCTTCTTCTTCTGTTGATTGTACTAGAAGAACAAGTTCTTCCGATAAAAGGGTTTTTGATGGAAGCGTTAATCAGGGCTGTGGTTTCTGTTTCATGAAACTTTCAATTTCAGATTCTAAGAATGGGCCTCCGACTGATCCTAATCACCGGAAGTTCAGTAATGAAATGTTGAAAGTTCTTATTGAGAAGAATGATTTCTATTCCAAGGAATCCAATCCTCACTTGGATGTTCATATGGGCACTGGAAGAAAACATTAA
Protein sequence
MLESGNAENHLSDVGCSGVNDDGDDEDDERRKSMAKAQIIAPDLGKQKGFGKAKRVMLYPFRKAKKQILRRRIKRDSSSCSSSSSVDCTRRTSSSDKRVFDGSVNQGCGFCFMKLSISDSKNGPPTDPNHRKFSNEMLKVLIEKNDFYSKESNPHLDVHMGTGRKH
Homology
BLAST of Csor.00g209360 vs. NCBI nr
Match:
KAG6599154.1 (hypothetical protein SDJN03_08932, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 330 bits (847), Expect = 3.87e-114
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
Query: 1 MLESGNAENHLSDVGCSGVNDDGDDEDDERRKSMAKAQIIAPDLGKQKGFGKAKRVMLYP 60
MLESGNAENHLSDVGCSGVNDDGDDEDDERRKSMAKAQIIAPDLGKQKGFGKAKRVMLYP
Sbjct: 1 MLESGNAENHLSDVGCSGVNDDGDDEDDERRKSMAKAQIIAPDLGKQKGFGKAKRVMLYP 60
Query: 61 FRKAKKQILRRRIKRDSSSCSSSSSVDCTRRTSSSDKRVFDGSVNQGCGFCFMKLSISDS 120
FRKAKKQILRRRIKRDSSSCSSSSSVDCTRRTSSSDKRVFDGSVNQGCGFCFMKLSISDS
Sbjct: 61 FRKAKKQILRRRIKRDSSSCSSSSSVDCTRRTSSSDKRVFDGSVNQGCGFCFMKLSISDS 120
Query: 121 KNGPPTDPNHRKFSNEMLKVLIEKNDFYSKESNPHLDVHMGTGRKH 166
KNGPPTDPNHRKFSNEMLKVLIEKNDFYSKESNPHLDVHMGTGRKH
Sbjct: 121 KNGPPTDPNHRKFSNEMLKVLIEKNDFYSKESNPHLDVHMGTGRKH 166
BLAST of Csor.00g209360 vs. NCBI nr
Match:
XP_022999773.1 (uncharacterized protein LOC111494022 [Cucurbita maxima] >XP_022999774.1 uncharacterized protein LOC111494022 [Cucurbita maxima])
HSP 1 Score: 326 bits (835), Expect = 2.62e-112
Identity = 163/166 (98.19%), Postives = 165/166 (99.40%), Query Frame = 0
Query: 1 MLESGNAENHLSDVGCSGVNDDGDDEDDERRKSMAKAQIIAPDLGKQKGFGKAKRVMLYP 60
MLESGNAENHLSDVGCSGVNDDGDDED+ERRKSMAK QIIAPDLGKQKGFGKAKRVMLYP
Sbjct: 1 MLESGNAENHLSDVGCSGVNDDGDDEDNERRKSMAKGQIIAPDLGKQKGFGKAKRVMLYP 60
Query: 61 FRKAKKQILRRRIKRDSSSCSSSSSVDCTRRTSSSDKRVFDGSVNQGCGFCFMKLSISDS 120
FRKAKKQILRRRIKRDSSSCSSSSSVDCTRRTSSSDKRVFDGSVNQGCGFCFMKLSISDS
Sbjct: 61 FRKAKKQILRRRIKRDSSSCSSSSSVDCTRRTSSSDKRVFDGSVNQGCGFCFMKLSISDS 120
Query: 121 KNGPPTDPNHRKFSNEMLKVLIEKNDFYSKESNPHLDVHMGTGRKH 166
KNGPPTDPNHRKF+NEMLKVLIEKNDFYSKESNPHLDVHMGTGRKH
Sbjct: 121 KNGPPTDPNHRKFTNEMLKVLIEKNDFYSKESNPHLDVHMGTGRKH 166
BLAST of Csor.00g209360 vs. NCBI nr
Match:
XP_023545330.1 (uncharacterized protein LOC111804772 [Cucurbita pepo subsp. pepo] >XP_023545331.1 uncharacterized protein LOC111804772 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 321 bits (823), Expect = 1.83e-110
Identity = 163/167 (97.60%), Postives = 165/167 (98.80%), Query Frame = 0
Query: 1 MLESGNAENHLSDVGCSGVNDDGDDEDDERRKSMAKAQIIAPDLGKQKGFGKAKRVMLYP 60
MLESGNAENHLSDVGCSGVNDDGDDEDDERRKSMAKAQIIAPDLG+QKGFGKAKRVMLYP
Sbjct: 1 MLESGNAENHLSDVGCSGVNDDGDDEDDERRKSMAKAQIIAPDLGEQKGFGKAKRVMLYP 60
Query: 61 FRKAKKQILRRRIKRDSSSCSSSSS-VDCTRRTSSSDKRVFDGSVNQGCGFCFMKLSISD 120
FRKAKKQILRRRIKRDSSSCSSSSS VDCTRRTSSSDKRVFDGSVNQGCGFCFMKLSISD
Sbjct: 61 FRKAKKQILRRRIKRDSSSCSSSSSSVDCTRRTSSSDKRVFDGSVNQGCGFCFMKLSISD 120
Query: 121 SKNGPPTDPNHRKFSNEMLKVLIEKNDFYSKESNPHLDVHMGTGRKH 166
KNGPPTDPNHRKF+NEMLKVLIEKNDFYSKESNPHLDVHMGTGRKH
Sbjct: 121 PKNGPPTDPNHRKFTNEMLKVLIEKNDFYSKESNPHLDVHMGTGRKH 167
BLAST of Csor.00g209360 vs. NCBI nr
Match:
XP_022946062.1 (uncharacterized protein LOC111450262 [Cucurbita moschata] >XP_022946063.1 uncharacterized protein LOC111450262 [Cucurbita moschata])
HSP 1 Score: 320 bits (819), Expect = 7.21e-110
Identity = 160/166 (96.39%), Postives = 162/166 (97.59%), Query Frame = 0
Query: 1 MLESGNAENHLSDVGCSGVNDDGDDEDDERRKSMAKAQIIAPDLGKQKGFGKAKRVMLYP 60
MLESGNAENHLSDVGCSGVNDD DDEDDERRKSMAKAQIIAPDLGKQKGFGKAKRVMLYP
Sbjct: 1 MLESGNAENHLSDVGCSGVNDDADDEDDERRKSMAKAQIIAPDLGKQKGFGKAKRVMLYP 60
Query: 61 FRKAKKQILRRRIKRDSSSCSSSSSVDCTRRTSSSDKRVFDGSVNQGCGFCFMKLSISDS 120
FRKAKKQILRRRIKRDSSSCSSSSSVDC RRTSSSDK VFDGSVNQGCGFCFMKLSISD
Sbjct: 61 FRKAKKQILRRRIKRDSSSCSSSSSVDCNRRTSSSDKMVFDGSVNQGCGFCFMKLSISDP 120
Query: 121 KNGPPTDPNHRKFSNEMLKVLIEKNDFYSKESNPHLDVHMGTGRKH 166
KNGPPTDPNHRKF+N+MLKVLIEKNDFYSKESNPHLDVHMGTGRKH
Sbjct: 121 KNGPPTDPNHRKFTNQMLKVLIEKNDFYSKESNPHLDVHMGTGRKH 166
BLAST of Csor.00g209360 vs. NCBI nr
Match:
KAG7030094.1 (hypothetical protein SDJN02_08441, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 310 bits (793), Expect = 7.90e-106
Identity = 156/159 (98.11%), Postives = 157/159 (98.74%), Query Frame = 0
Query: 1 MLESGNAENHLSDVGCSGVNDDGDDEDDERRKSMAKAQIIAPDLGKQKGFGKAKRVMLYP 60
MLESGNAENHLSDVGCSGVNDD DDEDDERRKSMAKAQIIAPDLGKQKGFGKAKRVMLYP
Sbjct: 1 MLESGNAENHLSDVGCSGVNDDADDEDDERRKSMAKAQIIAPDLGKQKGFGKAKRVMLYP 60
Query: 61 FRKAKKQILRRRIKRDSSSCSSSSSVDCTRRTSSSDKRVFDGSVNQGCGFCFMKLSISDS 120
FRKAKKQILRRRIKRDSSSCSSSSSVDCTRRTSSSDKRVFDGSVNQGCGFCFMKLSISDS
Sbjct: 61 FRKAKKQILRRRIKRDSSSCSSSSSVDCTRRTSSSDKRVFDGSVNQGCGFCFMKLSISDS 120
Query: 121 KNGPPTDPNHRKFSNEMLKVLIEKNDFYSKESNPHLDVH 159
KNGPPTDPNHRKFSNEMLKVLIEKNDFYSKESNPHL +H
Sbjct: 121 KNGPPTDPNHRKFSNEMLKVLIEKNDFYSKESNPHLGIH 159
BLAST of Csor.00g209360 vs. ExPASy TrEMBL
Match:
A0A6J1KI22 (uncharacterized protein LOC111494022 OS=Cucurbita maxima OX=3661 GN=LOC111494022 PE=4 SV=1)
HSP 1 Score: 326 bits (835), Expect = 1.27e-112
Identity = 163/166 (98.19%), Postives = 165/166 (99.40%), Query Frame = 0
Query: 1 MLESGNAENHLSDVGCSGVNDDGDDEDDERRKSMAKAQIIAPDLGKQKGFGKAKRVMLYP 60
MLESGNAENHLSDVGCSGVNDDGDDED+ERRKSMAK QIIAPDLGKQKGFGKAKRVMLYP
Sbjct: 1 MLESGNAENHLSDVGCSGVNDDGDDEDNERRKSMAKGQIIAPDLGKQKGFGKAKRVMLYP 60
Query: 61 FRKAKKQILRRRIKRDSSSCSSSSSVDCTRRTSSSDKRVFDGSVNQGCGFCFMKLSISDS 120
FRKAKKQILRRRIKRDSSSCSSSSSVDCTRRTSSSDKRVFDGSVNQGCGFCFMKLSISDS
Sbjct: 61 FRKAKKQILRRRIKRDSSSCSSSSSVDCTRRTSSSDKRVFDGSVNQGCGFCFMKLSISDS 120
Query: 121 KNGPPTDPNHRKFSNEMLKVLIEKNDFYSKESNPHLDVHMGTGRKH 166
KNGPPTDPNHRKF+NEMLKVLIEKNDFYSKESNPHLDVHMGTGRKH
Sbjct: 121 KNGPPTDPNHRKFTNEMLKVLIEKNDFYSKESNPHLDVHMGTGRKH 166
BLAST of Csor.00g209360 vs. ExPASy TrEMBL
Match:
A0A6J1G2R9 (uncharacterized protein LOC111450262 OS=Cucurbita moschata OX=3662 GN=LOC111450262 PE=4 SV=1)
HSP 1 Score: 320 bits (819), Expect = 3.49e-110
Identity = 160/166 (96.39%), Postives = 162/166 (97.59%), Query Frame = 0
Query: 1 MLESGNAENHLSDVGCSGVNDDGDDEDDERRKSMAKAQIIAPDLGKQKGFGKAKRVMLYP 60
MLESGNAENHLSDVGCSGVNDD DDEDDERRKSMAKAQIIAPDLGKQKGFGKAKRVMLYP
Sbjct: 1 MLESGNAENHLSDVGCSGVNDDADDEDDERRKSMAKAQIIAPDLGKQKGFGKAKRVMLYP 60
Query: 61 FRKAKKQILRRRIKRDSSSCSSSSSVDCTRRTSSSDKRVFDGSVNQGCGFCFMKLSISDS 120
FRKAKKQILRRRIKRDSSSCSSSSSVDC RRTSSSDK VFDGSVNQGCGFCFMKLSISD
Sbjct: 61 FRKAKKQILRRRIKRDSSSCSSSSSVDCNRRTSSSDKMVFDGSVNQGCGFCFMKLSISDP 120
Query: 121 KNGPPTDPNHRKFSNEMLKVLIEKNDFYSKESNPHLDVHMGTGRKH 166
KNGPPTDPNHRKF+N+MLKVLIEKNDFYSKESNPHLDVHMGTGRKH
Sbjct: 121 KNGPPTDPNHRKFTNQMLKVLIEKNDFYSKESNPHLDVHMGTGRKH 166
BLAST of Csor.00g209360 vs. ExPASy TrEMBL
Match:
A0A0A0LH19 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G035380 PE=4 SV=1)
HSP 1 Score: 249 bits (636), Expect = 3.45e-82
Identity = 133/174 (76.44%), Postives = 145/174 (83.33%), Query Frame = 0
Query: 1 MLESGNAENHLSDVGCSGVNDDGDDEDDERRKSMAKAQIIAPD--------LGKQKGFGK 60
MLES +AEN++SDVGCSGVNDDGDDEDDE R +MAK QI + +GK KGFGK
Sbjct: 1 MLESRHAENNISDVGCSGVNDDGDDEDDETRNTMAKTQIRDDEFDDDRKMEMGK-KGFGK 60
Query: 61 AKRVMLYPFRKAKKQILRRRIKRDSSSCSSSSSVDCTRRTSSSDKRVFDGSVNQGCGFCF 120
AK+VM YPFRKAKKQILRRRIKRDSS SSSSSV C+RRT+S DKR FDGSVNQGCGFC
Sbjct: 61 AKQVMFYPFRKAKKQILRRRIKRDSSCSSSSSSVTCSRRTNSLDKRGFDGSVNQGCGFCL 120
Query: 121 MKLSISDSKNGPPTDPNHRKFSNEMLKVLIEKNDFYSKESNPHLDVHMGTGRKH 166
KLSISDSKNG PTDPNHRKF+NEMLKVLIEKNDFYSKESNPH DV + T +KH
Sbjct: 121 TKLSISDSKNGSPTDPNHRKFTNEMLKVLIEKNDFYSKESNPHFDVQVDTRQKH 173
BLAST of Csor.00g209360 vs. ExPASy TrEMBL
Match:
A0A1S3BWA1 (uncharacterized protein LOC103493824 OS=Cucumis melo OX=3656 GN=LOC103493824 PE=4 SV=1)
HSP 1 Score: 241 bits (614), Expect = 9.45e-79
Identity = 134/180 (74.44%), Postives = 146/180 (81.11%), Query Frame = 0
Query: 1 MLESGNAENHLSDVGCSGVNDDGDDEDDERRKSMAKAQIIAPD--------LGKQKGFGK 60
MLES +AEN++SDVGCSGVNDDGDDEDDE R +MAK QI + +GK KGFGK
Sbjct: 1 MLESRHAENNISDVGCSGVNDDGDDEDDETRNTMAKTQIRDDEFDDDRKMEMGK-KGFGK 60
Query: 61 AKRVMLYPFRKAKKQILRRRIKR-----DSSSCSSSS-SVDCTRRTSSSDKRVFDGSVNQ 120
AK+VM YPFRKAKKQILRRRIKR SS CSSSS SV C+RRT+S DKR FDGSVNQ
Sbjct: 61 AKQVMFYPFRKAKKQILRRRIKRGSSCSSSSPCSSSSPSVICSRRTNSLDKRGFDGSVNQ 120
Query: 121 GCGFCFMKLSISDSKNGPPTDPNHRKFSNEMLKVLIEKNDFYSKESNPHLDVHMGTGRKH 166
GCGFC KLSISDSKNG PTDPNHRKF+NEMLKVLIEKNDFYSKESNPHLDV + T +KH
Sbjct: 121 GCGFCLTKLSISDSKNGSPTDPNHRKFTNEMLKVLIEKNDFYSKESNPHLDVQVDTRQKH 179
BLAST of Csor.00g209360 vs. ExPASy TrEMBL
Match:
A0A6J1DRZ8 (uncharacterized protein LOC111023307 OS=Momordica charantia OX=3673 GN=LOC111023307 PE=4 SV=1)
HSP 1 Score: 198 bits (504), Expect = 3.59e-62
Identity = 119/173 (68.79%), Postives = 135/173 (78.03%), Query Frame = 0
Query: 1 MLESGNAENHLSDVGCSGVNDDGDDEDDERRKSMAKAQI---IAPDLGKQ----KGFGKA 60
MLESG+AEN +SDVGCSGVNDD DDEDDE K+MA AQI D GK+ +GFGKA
Sbjct: 1 MLESGHAEN-VSDVGCSGVNDDEDDEDDETGKTMAAAQIGHDCDDDDGKKHKGKRGFGKA 60
Query: 61 KRVMLYPFRKAKKQILRRRIKRDSSSCSSSSSVDCTRRTSSSDKRVFDGSVNQGCGFCFM 120
K+V+ YPFRKAKKQILRR+IKR +SSSS T RT SSDKRV DGSVNQGCGFCF
Sbjct: 61 KQVISYPFRKAKKQILRRKIKR-----ASSSSFTATSRTLSSDKRVVDGSVNQGCGFCFK 120
Query: 121 KLSISDSKNGPPT-DPNHRKFSNEMLKVLIEKNDFYSKESNPHLDVHMGTGRK 165
+L ISDSKNG T DPN+RKF++EMLK+LIEKNDFYSKE NPHLD + T +K
Sbjct: 121 EL-ISDSKNGSQTTDPNNRKFTDEMLKLLIEKNDFYSKECNPHLDSKVDTRQK 166
BLAST of Csor.00g209360 vs. TAIR 10
Match:
AT5G26720.1 (unknown protein; Has 15 Blast hits to 15 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 47.0 bits (110), Expect = 1.7e-05
Identity = 30/72 (41.67%), Postives = 40/72 (55.56%), Query Frame = 0
Query: 90 RRTSSSDKRVFDGSVNQGCGFCFMKL------SISDSKNGPPTDPNHRKFSNEMLKVLIE 149
R+ S KR + GS GC F M+ S + P +DPN +FS+EML+V++E
Sbjct: 64 RKKPKSPKR-WSGSRKGGC-FRVMRPRRREGGDDDSSVSSPVSDPNDERFSHEMLRVMLE 123
Query: 150 KNDFYSKESNPH 156
NDF S E NPH
Sbjct: 124 TNDFCSDECNPH 133
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAG6599154.1 | 3.87e-114 | 100.00 | hypothetical protein SDJN03_08932, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022999773.1 | 2.62e-112 | 98.19 | uncharacterized protein LOC111494022 [Cucurbita maxima] >XP_022999774.1 uncharac... | [more] |
XP_023545330.1 | 1.83e-110 | 97.60 | uncharacterized protein LOC111804772 [Cucurbita pepo subsp. pepo] >XP_023545331.... | [more] |
XP_022946062.1 | 7.21e-110 | 96.39 | uncharacterized protein LOC111450262 [Cucurbita moschata] >XP_022946063.1 unchar... | [more] |
KAG7030094.1 | 7.90e-106 | 98.11 | hypothetical protein SDJN02_08441, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1KI22 | 1.27e-112 | 98.19 | uncharacterized protein LOC111494022 OS=Cucurbita maxima OX=3661 GN=LOC111494022... | [more] |
A0A6J1G2R9 | 3.49e-110 | 96.39 | uncharacterized protein LOC111450262 OS=Cucurbita moschata OX=3662 GN=LOC1114502... | [more] |
A0A0A0LH19 | 3.45e-82 | 76.44 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G035380 PE=4 SV=1 | [more] |
A0A1S3BWA1 | 9.45e-79 | 74.44 | uncharacterized protein LOC103493824 OS=Cucumis melo OX=3656 GN=LOC103493824 PE=... | [more] |
A0A6J1DRZ8 | 3.59e-62 | 68.79 | uncharacterized protein LOC111023307 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
Match Name | E-value | Identity | Description | |
AT5G26720.1 | 1.7e-05 | 41.67 | unknown protein; Has 15 Blast hits to 15 proteins in 5 species: Archae - 0; Bact... | [more] |