Csor.00g209230 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g209230
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Translation initiation factor IF-3
Location	Csor_Chr05: 8575117 .. 8579782 (+)
RNA-Seq Expression	Csor.00g209230
Synteny	Csor.00g209230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGGGCTCTCCGGCCGCTTCCCTTTCAAATCTATCTCATCTCAATCCTCCGCCACCGCCACCGCCACCACCACCACCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCGCCACTCCCTTTCGAACCTCAATTTTCCCTCTACCCCTCCCCTCCTCCAAATCCAATGCCTTCAGATTCCGCCTTCACAACTCCAACTCTCTGCGTCTCGTTTCCTCTCCAATTCGTACTTCTGTATTTGCTCGATACGGCGGCGCTCCTCGATCTTCAGGACCGGCGGGTTCTAAGCACTCTGAAGATTCTCTTGCTCTCGATGTTTCCTCCATCAGGTTTGTGCCTTATACATGCAAGAGTTACATGGCGAATGAATTTTGTTTTTGATTCCGAGTTCTTGTTTGTTTTATTGCGTTTTTTTGTGAGTGATTTGTATAGGTCGAATAATGTGAGGCTTATCGATGAACAGCAGAATATGGTAGGTGTTTTGTTCCGCCTGAATAGCTTTTGCTTGGGGAAAGGCAATTTTTGTCTATCTTCCTGTTTCCATTTACAACATTTCGAAACTTGTATGCGAGGCGCCTTAGTTTGGAAATTTAATCTTCTTGAAATGAATAGGTTGGAATTGTGCCAAAGTCCCAGGCGATTCAAATGGCTGAGGATGCCGAACTCGATTTGGTACGTCGTCTTGTACCGTGTGTTGTTAAAATAATTGTTTGTCTATGAATTCCAAAGAAACCTTGATCCAAACTTTAATGCTATGCGGGGACAAAATGTTGAAATATCATCATTAGCCTGTCAAGATACCTAAATATTTAGGAAAAAGATTTAGATATTTTAGGAATAGATTGTATAGCTTTTAGTATAAATACCCTTCCGCTCTATTCCCAAGAAATACAAAGCACAGAGTGCAGCAATAGTTTCTACCGAGTGTCTTGTAATCTCTTCTCGATTGGTGTTAATAAATTGATGTTAATAAAGTGTGCGAGTGTTTCCTACAAAAAGTTATGTTCAACACAAAATACATAGCTCATATTTCTTTTGAAACTATGAAATCGAGAATGTGCTTTTTAGCTTCAGGTTGATGTTGATCTTAAATCTTAATTCCTTTTTCACTCTCTGCTTGTTTATTGCCACTTGGGCTTTGGTTTATCTTCAATAAACTGGTCTCTATATAAAACTGAGCATGGAATCAAAAGCTTATGGTAATTATAACTGAAAATTGTAGTTCTAAGTTATAGCAGTTCATCCATAACTAGAAGAATCATCGCATGGTGAATGTTTTTCATTTCAGAGTTGTGTATTAGGCCAACTTTACTGTTTGCTCCGATTTAAAATTGTAATTTCTTTCCATATGGGCGTAAACCGGCAACGAAACTTCTATCTGTCAACACAAGACTTGAAACTTTCTCAGCAATCAGCATTTTAGTTGTCTGCATACTCAAGTTTGGCTGATGCAATTTACGAACCCGTCTCACAGTCTGTGTATTGTTTACTACATGGATAAAGATGGTCATGGACTATTATTTTCTTGGAAACCATGTATGCAACAACCTAAGCCCACTGCTAGCAGATATTGTCCGCTTTGGCTCATTACATATGCCGCCGGCCTCACGGTTTTAAAACACGTCTACTTGGGAGATGTTTATACACTTTTATAAGGAATGTTTCGTTCTCCTCTCCAACTGTTGTGTGATCTCACATTGGTTGGAGAGGGGAGCGAAACATTCCTTATAAGAGTGTGAAAACCTCTCCCTAGAGGATGCGTTTTAAAACCTTGAGGGGAAGTCCAAAGAGAATAATATCTGCTAGAGGTAGGCTTGAGCTGTTACAATGTAATTTTGTTGCTTTGTGTTGGATATAGCTAATTCTTTCTATTCCATTCAGGTTGTATTATCCCCTGATGCAGATCCTCCGGTTGTCAGAATAATGGATTACAGGTATGCCACTTTCTCACTCTGTTCTTCCCATTACCTCTCTGCTTGTGGAAAAAGTTGTATTTGCTCAAGTCCAATGCCAATCTGATGAACTTTAATGATTACACTAGTTCTTTAGTAAACCCGTTGAGATGATTTATTTTCAATTAATACTTCACTTTCAATTAAATGTTCTTGAGAAAGTAATATATGAAAATACTAAAGAGATGGAAACATGGTACAATGTAATGGAGAAATAATGAAAAATATGATGATTGTTATGTTTTCACTGGGAGAATTAAAGGGTCACATTCGTTTTTCCTTGTTGAATTTTGTTCCTTTTATGTTGAGATTTTTCTTTTCCTGTCTTTCTCAGTAAGTATAGGTACGATCTACAAAAGAAGAAACGAGAACAACAGAAGAAAAGTGCTGGTGAATCTCTTTCTTAATTGAGTCTGCACAATTTATTTGGTTCACAAACCTTTCTGATTTGGGGAAAGATACTAATAATGTGTGGTTTTGAATGTTAGCAACTCGCATGGATTTGAAGGAGCTTAAAATGGGGTAACACATTCCTCAATTGCTTTGTTTTTTGGAGGTTTTCCTTTCTTTTCTTCTTCTTCTCAACCTAAAGTCACTTGAACTTATGACTTCTAAGATCAATAATCAACCTGTAAAGCCAAGAGTCATGAGAGGCTTTTGTTCCTTGCGTTTCGCTGCCATTTCAGAAATAATTCTGCACACGTTCCTTTTCTCAATCTCAACCTTCTGGTTGCTATTATTATTGCACAGTTATAAAATTGACCAACATGATTACTCTGTTCGTTTGAGAGCTGCAAAGAAGTTTTTGCAAGATGGAGATAAGGTTTCTTCAGGAATCTTTTCTATATCTTTTATCTTCTCTTCATGCATCCAAATATATTGTTATATTTGTTTGCATCACTTTGGAAATCTTGTAACGAATATTGTAGGTTAAAGTTATAGTGAACTTGAAGGGTCGTGAAAACGAGTTCAGAAAAATAGCGATTGAGCTTGTCAAACGTTTCCAGGAAGAGCTCGGGGAGGTACTCATGTTCTATCAGTTTTGTGCCACCTTTAATATCTGTTCATCATGGCAATACTAGAGAAAAATGATGCTCCTTATTGTTTTAAGTGAAAATTGAAAGTGTAGTTTTAGACACTTGGTTGAACTATTTTATCTCTGATGTCTGACCCCATGAAAAACGATTAGTACCTTCAGGGAGAACAGTTTCTAAACCTGTTTAATTTAACCATTTTCTTAAGGTTTGTGGCATGTGAGTTTCCAGGCCTGTAACAGACCGGTCTGTCTAACCTACAATATTTGAACTCATTCATGAGATCTTATTATCTAAAATCTCATAGATGGGTGGCTAAAATGGGGTTTGGACCAAGCACTTTCTTTTTTGTTAGGAATTACGGACCTCCACAATGGTATGATATTGTCCACTTTGAGCATAACCTCTCATGGCTTTACTTTTGGGCTTCTCCAAAAGGCCTCGTACCAATGGAGATTTGTTCCTTATAAACCCATGATACAACTCCTTAATTAACTGATGTGGGACTCCTCTCCCAACAATCCTTGACATTTCTAAATCTTAACAAGAGCCTAAGTAATCTATAACAAGGGGCTCTAGTCAAGCAAGATAAGGCCTAAGGAACAATTAAGAAATCTATACAGATGGAAATTCGAAGAGAGGCATGATATTTATCGAGGAATCAACCTCCCCTGCTAGTACTTTAACCCCTCTGAAAATCCTGATATTTCTTTTCTCCCAAAAGACGACTTTTTTTGACGATTTGAAGGGGTTGCTTGGTGTCACAATCGCACTTTTCTTGGCAGCGGACTTTGCGATTGTGTGGCGCTCACTTCCCAACACCAAGTGAGTCAAGCCAGTTTGTATTCGCGACACCTTCAGCCGGGCAACACATGCTCAAGCCTCTAGTCTTGATTTGAGAAGAAGGTTTTAGAAGACGGGGACAGAGAGATTTTGAAAGTAAGATTGAGAGAGATTGAAAGCAATGTTATATGACATACAAGCAAAAGGCAACCCAACAACTTAAATAACATATAACTTTTTGGATAGGGAGAATTCGACAACTAGTCGCATCCTCCTATAGTACATTTTGAGGCGATTCAGGTGGCCTAGACGTGATTTCGCCGAACGGTCATACAAAATCAGGGGGAGAAGTTGACAACTAGTTATATCCCCTATAGTACATTGTGGGGCGATTCAGGTCTGGCAGACCTAAACATGATTTCGCCGAGTAGTCGTACAAACAGAAAATACTAACAATATAACATGGAACTAAATAAAGGGTTTGGCATGACATGGGCAATGCGGCCACGGGCAACACACCCTGGACGAGCATGACCGTGACACTTGGTACCCATTCAGAACATTTTGATCACATGACTCATTTTTTTACATTTTTCTAGTGTTTTTTCTTTCGTTCGAGTCTTCTTCTCTCTTATTTATTTACTCAAATGTAAATATGATACCTTCTGTTATTATCTCTCTTCTCCATTGACCTGCTCAATACTTTATTATTCACAGCTTGCAACTGAAGAGGCCAAAAACTTCAGAGACAGGAATGTATTTATTGTTCTAGCTCCTAACAAGGCTGTTCTTCAAAAGTCTCAAGAACCCCCGAAGAAAAAAGATAAACCTGCTGCAGTTAATGAAGTTTCTGCCCGTGTCGAAGTTTCGGAAGCATCGAGCTTAAGCCAAAAATAG

mRNA sequence

ATGGCTGGGCTCTCCGGCCGCTTCCCTTTCAAATCTATCTCATCTCAATCCTCCGCCACCGCCACCGCCACCACCACCACCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCGCCACTCCCTTTCGAACCTCAATTTTCCCTCTACCCCTCCCCTCCTCCAAATCCAATGCCTTCAGATTCCGCCTTCACAACTCCAACTCTCTGCGTCTCGTTTCCTCTCCAATTCGTACTTCTGTATTTGCTCGATACGGCGGCGCTCCTCGATCTTCAGGACCGGCGGGTTCTAAGCACTCTGAAGATTCTCTTGCTCTCGATGTTTCCTCCATCAGGTCGAATAATGTGAGGCTTATCGATGAACAGCAGAATATGGTTGGAATTGTGCCAAAGTCCCAGGCGATTCAAATGGCTGAGGATGCCGAACTCGATTTGGTTGTATTATCCCCTGATGCAGATCCTCCGGTTGTCAGAATAATGGATTACAGTAAGTATAGGTACGATCTACAAAAGAAGAAACGAGAACAACAGAAGAAAAGTGCTGCAACTCGCATGGATTTGAAGGAGCTTAAAATGGGTTATAAAATTGACCAACATGATTACTCTGTTCGTTTGAGAGCTGCAAAGAAGTTTTTGCAAGATGGAGATAAGGTTAAAGTTATAGTGAACTTGAAGGGTCGTGAAAACGAGTTCAGAAAAATAGCGATTGAGCTTGTCAAACGTTTCCAGGAAGAGCTCGGGGAGCTTGCAACTGAAGAGGCCAAAAACTTCAGAGACAGGAATGTATTTATTGTTCTAGCTCCTAACAAGGCTGTTCTTCAAAAGTCTCAAGAACCCCCGAAGAAAAAAGATAAACCTGCTGCAGTTAATGAAGTTTCTGCCCGTGTCGAAGTTTCGGAAGCATCGAGCTTAAGCCAAAAATAG

Coding sequence (CDS)

ATGGCTGGGCTCTCCGGCCGCTTCCCTTTCAAATCTATCTCATCTCAATCCTCCGCCACCGCCACCGCCACCACCACCACCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCGCCACTCCCTTTCGAACCTCAATTTTCCCTCTACCCCTCCCCTCCTCCAAATCCAATGCCTTCAGATTCCGCCTTCACAACTCCAACTCTCTGCGTCTCGTTTCCTCTCCAATTCGTACTTCTGTATTTGCTCGATACGGCGGCGCTCCTCGATCTTCAGGACCGGCGGGTTCTAAGCACTCTGAAGATTCTCTTGCTCTCGATGTTTCCTCCATCAGGTCGAATAATGTGAGGCTTATCGATGAACAGCAGAATATGGTTGGAATTGTGCCAAAGTCCCAGGCGATTCAAATGGCTGAGGATGCCGAACTCGATTTGGTTGTATTATCCCCTGATGCAGATCCTCCGGTTGTCAGAATAATGGATTACAGTAAGTATAGGTACGATCTACAAAAGAAGAAACGAGAACAACAGAAGAAAAGTGCTGCAACTCGCATGGATTTGAAGGAGCTTAAAATGGGTTATAAAATTGACCAACATGATTACTCTGTTCGTTTGAGAGCTGCAAAGAAGTTTTTGCAAGATGGAGATAAGGTTAAAGTTATAGTGAACTTGAAGGGTCGTGAAAACGAGTTCAGAAAAATAGCGATTGAGCTTGTCAAACGTTTCCAGGAAGAGCTCGGGGAGCTTGCAACTGAAGAGGCCAAAAACTTCAGAGACAGGAATGTATTTATTGTTCTAGCTCCTAACAAGGCTGTTCTTCAAAAGTCTCAAGAACCCCCGAAGAAAAAAGATAAACCTGCTGCAGTTAATGAAGTTTCTGCCCGTGTCGAAGTTTCGGAAGCATCGAGCTTAAGCCAAAAATAG

Protein sequence

MAGLSGRFPFKSISSQSSATATATTTTSSSSSSSSSSATPFRTSIFPLPLPSSKSNAFRFRLHNSNSLRLVSSPIRTSVFARYGGAPRSSGPAGSKHSEDSLALDVSSIRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAATRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSARVEVSEASSLSQK

Homology

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BLAST of Csor.00g209230 vs. ExPASy Swiss-Prot
Match: Q94B52 (Translation initiation factor IF3-4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=IF3-4 PE=2 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 1.3e-75
Identity = 154/225 (68.44%), Postives = 183/225 (81.33%), Query Frame = 0


Query: 78  SVFARYGGAPRSSGPAGS----------KHSEDSLALDVSSIRSNNVRLIDEQQNMVGIV 137
           ++  RYGG     G  GS          K SED  +LD+S+IRS  VRLID+QQNM+G+V
Sbjct: 54  AITCRYGG----GGGGGSRFPGDRRGRQKESEDDDSLDISAIRSATVRLIDDQQNMIGLV 113

Query: 138 PKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAATRMDLKE 197
            K +A++ AEDAELDLV+LSPDADPPVVR+MDYSKYRY+ QK+K+EQQKK+  TRMDLKE
Sbjct: 114 SKEEAVRRAEDAELDLVILSPDADPPVVRMMDYSKYRYEQQKRKKEQQKKT--TRMDLKE 173

Query: 198 LKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQEELGEL 257
           LKMGY IDQHDYSVR+RAA+KFLQDGDKVKVIVN+KGRENEFR IAIEL++RFQ E+GEL
Sbjct: 174 LKMGYNIDQHDYSVRMRAARKFLQDGDKVKVIVNMKGRENEFRNIAIELLRRFQTEIGEL 233

Query: 258 ATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSA 293
            TEE+KNFRDRN+FIVL PNK V++K QEPP KK K  A ++VSA
Sbjct: 234 GTEESKNFRDRNLFIVLVPNKEVIRKVQEPPPKKKKKPADDKVSA 272

[Close]

BLAST of Csor.00g209230 vs. ExPASy Swiss-Prot
Match: O82234 (Translation initiation factor IF3-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=IF3-2 PE=2 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 3.1e-74
Identity = 158/247 (63.97%), Postives = 189/247 (76.52%), Query Frame = 0


Query: 53  SKSNAFRFRLHNSNSLRLVSSPIR----TSVFARYGGAPRSSGP---AGSKHSEDSLALD 112
           SK  + R      +   L  SP R    T  F   GG  R SG       K +E   ALD
Sbjct: 32  SKLCSLRLSKTELSFTNLTPSPRRAFAVTCRFGGGGGGYRFSGDNRRGRPKEAEIDEALD 91

Query: 113 VSSIRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRY 172
           +SSIRS  VRLID QQNM+G+V K +A++MA+DAELDLV+LSPDADPPVV++MDYSKYRY
Sbjct: 92  ISSIRSATVRLIDGQQNMLGLVSKDEAVRMADDAELDLVILSPDADPPVVKMMDYSKYRY 151

Query: 173 DLQKKKREQQKKSAATRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGR 232
           + QK+K++QQKK+  TRMDLKELKMGY IDQHDYSVRLRAA+KFLQDGDKVKVIV++KGR
Sbjct: 152 EQQKRKKDQQKKT--TRMDLKELKMGYNIDQHDYSVRLRAAQKFLQDGDKVKVIVSMKGR 211

Query: 233 ENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPA 292
           ENEFR IAIEL++RFQ E+GELATEE+KNFRDRN+FI+L PNK +++K QEPP +K K  
Sbjct: 212 ENEFRNIAIELLRRFQTEIGELATEESKNFRDRNMFIILVPNKEMIRKPQEPPTRKKKKT 271

[Close]

BLAST of Csor.00g209230 vs. ExPASy Swiss-Prot
Match: B2IY66 (Translation initiation factor IF-3 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) OX=63737 GN=infC PE=3 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.3e-31
Identity = 75/163 (46.01%), Postives = 113/163 (69.33%), Query Frame = 0


Query: 109 IRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQ 168
           IR   +R+ID     +GI+P  +A+Q+AE+ ELDLV++S  ADPPV RIMDY KY+++ +
Sbjct: 19  IRFPKIRVIDTDGAQLGIMPPQEALQLAEEKELDLVLISDKADPPVCRIMDYGKYKFEQE 78

Query: 169 KKKREQQKKSAATRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENE 228
           KK RE +KK      D+KE+KM YKI++HDY+VR++ A++FL+DGDKVK  V  +GRE +
Sbjct: 79  KKAREARKKQHTA--DVKEVKMRYKIEEHDYNVRVKQAERFLKDGDKVKATVMFRGREIQ 138

Query: 229 FRKIAIELVKRFQEEL---GELATEEAKNFRDRNVFIVLAPNK 269
              +A +L+KR   +L   GEL  ++A     RN+ ++++P K
Sbjct: 139 HSDLAEDLLKRMATDLEPFGEL--QQAPKKEGRNMMMLISPKK 177

[Close]

BLAST of Csor.00g209230 vs. ExPASy Swiss-Prot
Match: Q8YNE3 (Translation initiation factor IF-3 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=infC PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.3e-30
Identity = 72/161 (44.72%), Postives = 110/161 (68.32%), Query Frame = 0


Query: 109 IRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQ 168
           IR   +R+ID   + +GI+   +A+Q+AE+ ELDLV+LS  ADPPV RIMDY KY+++ +
Sbjct: 19  IRFPKIRVIDTDGSQLGILTPQEALQLAEEKELDLVLLSDKADPPVCRIMDYGKYKFEQE 78

Query: 169 KKKREQQKKSAATRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENE 228
           KK RE +KK      D+KE+KM YKI++HDY+VR++ A++FL+DGDKVK  V  +GRE +
Sbjct: 79  KKAREARKKQHTA--DVKEVKMRYKIEEHDYNVRVKQAERFLKDGDKVKATVMFRGREIQ 138

Query: 229 FRKIAIELVKRFQEELGELA-TEEAKNFRDRNVFIVLAPNK 269
              +A +L+KR   +L      ++A     RN+ ++++P K
Sbjct: 139 HSDLAEDLLKRMATDLEPFGEVQQAPKKEGRNMMMLISPKK 177

[Close]

BLAST of Csor.00g209230 vs. ExPASy Swiss-Prot
Match: Q3MBH6 (Translation initiation factor IF-3 OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=infC PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.3e-30
Identity = 72/161 (44.72%), Postives = 110/161 (68.32%), Query Frame = 0


Query: 109 IRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQ 168
           IR   +R+ID   + +GI+   +A+Q+AE+ ELDLV+LS  ADPPV RIMDY KY+++ +
Sbjct: 19  IRFPKIRVIDTDGSQLGILTPQEALQLAEEKELDLVLLSDKADPPVCRIMDYGKYKFEQE 78

Query: 169 KKKREQQKKSAATRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENE 228
           KK RE +KK      D+KE+KM YKI++HDY+VR++ A++FL+DGDKVK  V  +GRE +
Sbjct: 79  KKAREARKKQHTA--DVKEVKMRYKIEEHDYNVRVKQAERFLKDGDKVKATVMFRGREIQ 138

Query: 229 FRKIAIELVKRFQEELGELA-TEEAKNFRDRNVFIVLAPNK 269
              +A +L+KR   +L      ++A     RN+ ++++P K
Sbjct: 139 HSDLAEDLLKRMATDLEPFGEVQQAPKKEGRNMMMLISPKK 177

[Close]

BLAST of Csor.00g209230 vs. NCBI nr
Match: KAG6599141.1 (Translation initiation factor IF3-2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 547 bits (1410), Expect = 2.43e-195
Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 0


Query: 1   MAGLSGRFPFKSISSQSSATATATTTTSSSSSSSSSSATPFRTSIFPLPLPSSKSNAFRF 60
           MAGLSGRFPFKSISSQSSATATATTTTSSSSSSSSSSATPFRTSIFPLPLPSSKSNAFRF
Sbjct: 1   MAGLSGRFPFKSISSQSSATATATTTTSSSSSSSSSSATPFRTSIFPLPLPSSKSNAFRF 60

Query: 61  RLHNSNSLRLVSSPIRTSVFARYGGAPRSSGPAGSKHSEDSLALDVSSIRSNNVRLIDEQ 120
           RLHNSNSLRLVSSPIRTSVFARYGGAPRSSGPAGSKHSEDSLALDVSSIRSNNVRLIDEQ
Sbjct: 61  RLHNSNSLRLVSSPIRTSVFARYGGAPRSSGPAGSKHSEDSLALDVSSIRSNNVRLIDEQ 120

Query: 121 QNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAA 180
           QNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAA
Sbjct: 121 QNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAA 180

Query: 181 TRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRF 240
           TRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRF
Sbjct: 181 TRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRF 240

Query: 241 QEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSARVEVSEAS 300
           QEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSARVEVSEAS
Sbjct: 241 QEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSARVEVSEAS 300

Query: 301 SLSQK 305
           SLSQK
Sbjct: 301 SLSQK 305

[Close]

BLAST of Csor.00g209230 vs. NCBI nr
Match: XP_022946541.1 (translation initiation factor IF3-4, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 534 bits (1376), Expect = 3.06e-190
Identity = 299/305 (98.03%), Postives = 299/305 (98.03%), Query Frame = 0


Query: 1   MAGLSGRFPFKSISSQSSATATATTTTSSSSSSSSSSATPFRTSIFPLPLPSSKSNAFRF 60
           MAGLSGRFPFKSISSQSSATATATTTTSSSSS     ATPFRTSIFPLPLPSSKSNAFRF
Sbjct: 1   MAGLSGRFPFKSISSQSSATATATTTTSSSSS-----ATPFRTSIFPLPLPSSKSNAFRF 60

Query: 61  RLHNSNSLRLVSSPIRTSVFARYGGAPRSSGPAGSKHSEDSLALDVSSIRSNNVRLIDEQ 120
           RLHNSNSLRLVSSPIRTSVFARYGGAPRSSGPAGSK SEDSLALDVSSIRSNNVRLIDEQ
Sbjct: 61  RLHNSNSLRLVSSPIRTSVFARYGGAPRSSGPAGSKRSEDSLALDVSSIRSNNVRLIDEQ 120

Query: 121 QNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAA 180
           QNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAA
Sbjct: 121 QNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAA 180

Query: 181 TRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRF 240
           TRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRF
Sbjct: 181 TRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRF 240

Query: 241 QEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSARVEVSEAS 300
           QEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSARVEVSEAS
Sbjct: 241 QEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSARVEVSEAS 300

Query: 301 SLSQK 305
           SLSQK
Sbjct: 301 SLSQK 300

[Close]

BLAST of Csor.00g209230 vs. NCBI nr
Match: XP_023547209.1 (translation initiation factor IF3-4, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 521 bits (1342), Expect = 4.31e-185
Identity = 292/305 (95.74%), Postives = 292/305 (95.74%), Query Frame = 0


Query: 1   MAGLSGRFPFKSISSQSSATATATTTTSSSSSSSSSSATPFRTSIFPLPLPSSKSNAFRF 60
           MAGLSGRFPFKSISSQSSATATATT       SSSSSATPFRTSIFPLPLPSSKSNAFRF
Sbjct: 1   MAGLSGRFPFKSISSQSSATATATT-------SSSSSATPFRTSIFPLPLPSSKSNAFRF 60

Query: 61  RLHNSNSLRLVSSPIRTSVFARYGGAPRSSGPAGSKHSEDSLALDVSSIRSNNVRLIDEQ 120
           RLHNSNSLRLVSSPIRTSVFARYGGAPRSSGP GSK SEDSLALDVSSIRSNNVRLIDEQ
Sbjct: 61  RLHNSNSLRLVSSPIRTSVFARYGGAPRSSGPTGSKRSEDSLALDVSSIRSNNVRLIDEQ 120

Query: 121 QNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAA 180
           QNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAA
Sbjct: 121 QNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAA 180

Query: 181 TRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRF 240
           TRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRF
Sbjct: 181 TRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRF 240

Query: 241 QEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSARVEVSEAS 300
           QEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSA VE  EA 
Sbjct: 241 QEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSAAVEAPEAP 298

Query: 301 SLSQK 305
           SLSQK
Sbjct: 301 SLSQK 298

[Close]

BLAST of Csor.00g209230 vs. NCBI nr
Match: XP_022999741.1 (translation initiation factor IF3-4, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 516 bits (1330), Expect = 2.90e-183
Identity = 290/305 (95.08%), Postives = 291/305 (95.41%), Query Frame = 0


Query: 1   MAGLSGRFPFKSISSQSSATATATTTTSSSSSSSSSSATPFRTSIFPLPLPSSKSNAFRF 60
           MAGLSGRFPFKSISSQSSATATATT       SSSSSATPFRTSIFPLP PSSKSNA RF
Sbjct: 1   MAGLSGRFPFKSISSQSSATATATT-------SSSSSATPFRTSIFPLPFPSSKSNAVRF 60

Query: 61  RLHNSNSLRLVSSPIRTSVFARYGGAPRSSGPAGSKHSEDSLALDVSSIRSNNVRLIDEQ 120
           RLH+SNSLRLVSSPIRTSVFARYGGAPRSSGP GSK SEDSLALDVSSIRSNNVRLIDEQ
Sbjct: 61  RLHSSNSLRLVSSPIRTSVFARYGGAPRSSGPTGSKRSEDSLALDVSSIRSNNVRLIDEQ 120

Query: 121 QNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAA 180
           QNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAA
Sbjct: 121 QNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAA 180

Query: 181 TRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRF 240
           TRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRF
Sbjct: 181 TRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRF 240

Query: 241 QEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSARVEVSEAS 300
           QEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSA VE  EAS
Sbjct: 241 QEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSAGVEAPEAS 298

Query: 301 SLSQK 305
           SLSQK
Sbjct: 301 SLSQK 298

[Close]

BLAST of Csor.00g209230 vs. NCBI nr
Match: XP_038891171.1 (translation initiation factor IF3-4, chloroplastic [Benincasa hispida])

HSP 1 Score: 434 bits (1116), Expect = 1.00e-150
Identity = 248/300 (82.67%), Postives = 269/300 (89.67%), Query Frame = 0


Query: 1   MAGLSGRFPFKSISSQSSATATATTTTSSSSSSSSSSATPFRTSIFPLPLPSSKSNAFRF 60
           MAGLSGRFPFK + SQS    T  TTTS+++++SSSSATPFRTSI PLPL SSK+NAF+F
Sbjct: 1   MAGLSGRFPFKPLLSQS----TTATTTSAAAATSSSSATPFRTSIRPLPLSSSKANAFKF 60

Query: 61  RLHNSNSLRLV-----SSPIRTSVFARYGGAPRSSGPAGSKHSEDSLALDVSSIRSNNVR 120
           RL  SNSLRLV     SSPIRTSVF+RYGGAPRSSGPA SK S+D   LDVS+IRSNNVR
Sbjct: 61  RLRKSNSLRLVVSFPVSSPIRTSVFSRYGGAPRSSGPADSKRSDDEFGLDVSAIRSNNVR 120

Query: 121 LIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQ 180
           LID QQNMVGIV K+QAIQMAEDAELDLVVLSPDADPPVVRIMDY+KYRY+LQKKKR QQ
Sbjct: 121 LIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQ 180

Query: 181 KKSAATRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIE 240
           KKSAATRMDLKELKMGY IDQHDYSVRLRAA+KFL+DGDKVKVIVNLKGRENEFR IAIE
Sbjct: 181 KKSAATRMDLKELKMGYNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIE 240

Query: 241 LVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQE-PPKKKDKPAAVNEVSARV 294
           L++RFQEE+GELATEEAKNFRDRN+FIVL PNKAVLQK+QE PPKKKDKPA VNEVSA V
Sbjct: 241 LIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEQPPKKKDKPA-VNEVSAGV 295

[Close]

BLAST of Csor.00g209230 vs. ExPASy TrEMBL
Match: A0A6J1G3Y5 (Translation initiation factor IF-3 OS=Cucurbita moschata OX=3662 GN=LOC111450575 PE=3 SV=1)

HSP 1 Score: 534 bits (1376), Expect = 1.48e-190
Identity = 299/305 (98.03%), Postives = 299/305 (98.03%), Query Frame = 0


Query: 1   MAGLSGRFPFKSISSQSSATATATTTTSSSSSSSSSSATPFRTSIFPLPLPSSKSNAFRF 60
           MAGLSGRFPFKSISSQSSATATATTTTSSSSS     ATPFRTSIFPLPLPSSKSNAFRF
Sbjct: 1   MAGLSGRFPFKSISSQSSATATATTTTSSSSS-----ATPFRTSIFPLPLPSSKSNAFRF 60

Query: 61  RLHNSNSLRLVSSPIRTSVFARYGGAPRSSGPAGSKHSEDSLALDVSSIRSNNVRLIDEQ 120
           RLHNSNSLRLVSSPIRTSVFARYGGAPRSSGPAGSK SEDSLALDVSSIRSNNVRLIDEQ
Sbjct: 61  RLHNSNSLRLVSSPIRTSVFARYGGAPRSSGPAGSKRSEDSLALDVSSIRSNNVRLIDEQ 120

Query: 121 QNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAA 180
           QNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAA
Sbjct: 121 QNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAA 180

Query: 181 TRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRF 240
           TRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRF
Sbjct: 181 TRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRF 240

Query: 241 QEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSARVEVSEAS 300
           QEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSARVEVSEAS
Sbjct: 241 QEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSARVEVSEAS 300

Query: 301 SLSQK 305
           SLSQK
Sbjct: 301 SLSQK 300

[Close]

BLAST of Csor.00g209230 vs. ExPASy TrEMBL
Match: A0A6J1KDY9 (Translation initiation factor IF-3 OS=Cucurbita maxima OX=3661 GN=LOC111493999 PE=3 SV=1)

HSP 1 Score: 516 bits (1330), Expect = 1.41e-183
Identity = 290/305 (95.08%), Postives = 291/305 (95.41%), Query Frame = 0


Query: 1   MAGLSGRFPFKSISSQSSATATATTTTSSSSSSSSSSATPFRTSIFPLPLPSSKSNAFRF 60
           MAGLSGRFPFKSISSQSSATATATT       SSSSSATPFRTSIFPLP PSSKSNA RF
Sbjct: 1   MAGLSGRFPFKSISSQSSATATATT-------SSSSSATPFRTSIFPLPFPSSKSNAVRF 60

Query: 61  RLHNSNSLRLVSSPIRTSVFARYGGAPRSSGPAGSKHSEDSLALDVSSIRSNNVRLIDEQ 120
           RLH+SNSLRLVSSPIRTSVFARYGGAPRSSGP GSK SEDSLALDVSSIRSNNVRLIDEQ
Sbjct: 61  RLHSSNSLRLVSSPIRTSVFARYGGAPRSSGPTGSKRSEDSLALDVSSIRSNNVRLIDEQ 120

Query: 121 QNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAA 180
           QNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAA
Sbjct: 121 QNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAA 180

Query: 181 TRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRF 240
           TRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRF
Sbjct: 181 TRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRF 240

Query: 241 QEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSARVEVSEAS 300
           QEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSA VE  EAS
Sbjct: 241 QEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSAGVEAPEAS 298

Query: 301 SLSQK 305
           SLSQK
Sbjct: 301 SLSQK 298

[Close]

BLAST of Csor.00g209230 vs. ExPASy TrEMBL
Match: A0A6J1DYM5 (Translation initiation factor IF-3 OS=Momordica charantia OX=3673 GN=LOC111024717 PE=3 SV=1)

HSP 1 Score: 430 bits (1105), Expect = 1.99e-149
Identity = 241/295 (81.69%), Postives = 268/295 (90.85%), Query Frame = 0


Query: 1   MAGLSGRFPFKSISSQSSATATATTTTSSSSSSSSSSATPFRTSIFPLPLPSSKSNAFRF 60
           MAGL+ RFPFK + SQSSAT   T++ ++SSSSS+++A PFRTSI PLPL SS+SNAF F
Sbjct: 1   MAGLTSRFPFKPLLSQSSAT---TSSAAASSSSSAAAAPPFRTSISPLPLSSSESNAFGF 60

Query: 61  RLHNSNSLRL-VSSPIRTSVFARYGGAPRSSGPAGSKHSEDSLALDVSSIRSNNVRLIDE 120
           RLHNSNSLRL VSSPIR SVFAR+GGAPRSSGPA SK S+D   LDVS+IRSNNVRLID 
Sbjct: 61  RLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGPADSKRSDDDFGLDVSAIRSNNVRLIDA 120

Query: 121 QQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSA 180
           QQNMVGIV K+QAIQMAEDAELDLVVLSPDADPPVVRIMDY+KYRY+LQKKKR QQKKSA
Sbjct: 121 QQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA 180

Query: 181 ATRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKR 240
           ATRMDLKELKMGY IDQHDYSVRL+AA++FL+DGDKVKVIVNLKGRENEFR IAIEL++R
Sbjct: 181 ATRMDLKELKMGYNIDQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRR 240

Query: 241 FQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSARV 294
           FQ+E+GELATEEAKNFRDRN+FIVL PNKAVLQK+QEPPKKKD PA +NEVSA V
Sbjct: 241 FQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPA-INEVSAGV 291

[Close]

BLAST of Csor.00g209230 vs. ExPASy TrEMBL
Match: A0A1S3BV82 (Translation initiation factor IF-3 OS=Cucumis melo OX=3656 GN=LOC103493630 PE=3 SV=1)

HSP 1 Score: 420 bits (1079), Expect = 2.22e-145
Identity = 242/300 (80.67%), Postives = 263/300 (87.67%), Query Frame = 0


Query: 1   MAGLSGRFPFKSISSQSSATATATTTTSSSSSSSSSSATPFRTSIFPLPLPSS-KSNAFR 60
           MAGLSG FPFKS+ SQSSA +T  TT+ +++ +SSSS TPFRTS   LP+ SS  SNAF+
Sbjct: 1   MAGLSGSFPFKSLLSQSSAAST--TTSPAAAPTSSSSTTPFRTSTPSLPISSSFNSNAFK 60

Query: 61  FRLHNSNSLRLV-----SSPIRTSVFARYGGAPRSSGPAGSKHSEDSLALDVSSIRSNNV 120
            RLH SNSLRLV     SSPIRTSVFAR GGAPRSSGP  SK S D   LDVS+IRSNNV
Sbjct: 61  LRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDSKRSNDEFGLDVSAIRSNNV 120

Query: 121 RLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQ 180
           RLID QQNMVG+V K+QAIQMAEDAELDLVVLSPDADPPVVRIMDY+KYRY+LQKKKR Q
Sbjct: 121 RLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQ 180

Query: 181 QKKSAATRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAI 240
           QKKSAATRMDLKELKMGY IDQHDYSVRL+AAKKFL+DGDKVKVIVNLKGRENEFR IAI
Sbjct: 181 QKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAI 240

Query: 241 ELVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSARV 294
           EL++RFQEE+GELATEEAKNFRDRN+FIVL PNKAVLQK+QEPPKKKDKPA VNEVSA V
Sbjct: 241 ELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPA-VNEVSAGV 297

[Close]

BLAST of Csor.00g209230 vs. ExPASy TrEMBL
Match: A0A0A0LH34 (Translation initiation factor IF-3 OS=Cucumis sativus OX=3659 GN=Csa_2G036070 PE=3 SV=1)

HSP 1 Score: 419 bits (1078), Expect = 3.39e-145
Identity = 242/303 (79.87%), Postives = 264/303 (87.13%), Query Frame = 0


Query: 1   MAGLSGRFPFKSISSQSSATATATTTTSSSSSS----SSSSATPFRTSIFPLPLPSSKSN 60
           MAGLSG FPFKS+ SQSSA AT   TTSSSS++    SSSS TPFRTS   LP+ SS SN
Sbjct: 1   MAGLSGSFPFKSLLSQSSAAAT---TTSSSSAAPPPTSSSSTTPFRTSFPSLPISSSNSN 60

Query: 61  AFRFRLHNSNSLRL-----VSSPIRTSVFARYGGAPRSSGPAGSKHSEDSLALDVSSIRS 120
           AF+FRLH SNSLRL     VSSPIRTSVFAR GGAPRSSGP  SK S D + LD+S+I+S
Sbjct: 61  AFKFRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPPDSKRSNDEIGLDISAIKS 120

Query: 121 NNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKK 180
            NVRLID +QNMVG+V K+QAIQMAEDAELDLVV+SPDADPPVVRIMDY+KYRY+LQKKK
Sbjct: 121 INVRLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKK 180

Query: 181 REQQKKSAATRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRK 240
           R QQKKSAATRMDLKELKMGY IDQHDYSVRL+AAKKFL+DGDKVKVIVNLKGRENEFR 
Sbjct: 181 RGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRN 240

Query: 241 IAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVS 294
           IAIEL++RFQEE+GELATEEAKNFRDRN+FIVL PNKAVLQK+QEPPKKKDKPA VN VS
Sbjct: 241 IAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPA-VNGVS 299

[Close]

BLAST of Csor.00g209230 vs. TAIR 10
Match: AT4G30690.1 (Translation initiation factor 3 protein )

HSP 1 Score: 284.6 bits (727), Expect = 9.1e-77
Identity = 154/225 (68.44%), Postives = 183/225 (81.33%), Query Frame = 0


Query: 78  SVFARYGGAPRSSGPAGS----------KHSEDSLALDVSSIRSNNVRLIDEQQNMVGIV 137
           ++  RYGG     G  GS          K SED  +LD+S+IRS  VRLID+QQNM+G+V
Sbjct: 54  AITCRYGG----GGGGGSRFPGDRRGRQKESEDDDSLDISAIRSATVRLIDDQQNMIGLV 113

Query: 138 PKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAATRMDLKE 197
            K +A++ AEDAELDLV+LSPDADPPVVR+MDYSKYRY+ QK+K+EQQKK+  TRMDLKE
Sbjct: 114 SKEEAVRRAEDAELDLVILSPDADPPVVRMMDYSKYRYEQQKRKKEQQKKT--TRMDLKE 173

Query: 198 LKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQEELGEL 257
           LKMGY IDQHDYSVR+RAA+KFLQDGDKVKVIVN+KGRENEFR IAIEL++RFQ E+GEL
Sbjct: 174 LKMGYNIDQHDYSVRMRAARKFLQDGDKVKVIVNMKGRENEFRNIAIELLRRFQTEIGEL 233

Query: 258 ATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSA 293
            TEE+KNFRDRN+FIVL PNK V++K QEPP KK K  A ++VSA
Sbjct: 234 GTEESKNFRDRNLFIVLVPNKEVIRKVQEPPPKKKKKPADDKVSA 272

[Close]

BLAST of Csor.00g209230 vs. TAIR 10
Match: AT2G24060.1 (Translation initiation factor 3 protein )

HSP 1 Score: 280.0 bits (715), Expect = 2.2e-75
Identity = 158/247 (63.97%), Postives = 189/247 (76.52%), Query Frame = 0


Query: 53  SKSNAFRFRLHNSNSLRLVSSPIR----TSVFARYGGAPRSSGP---AGSKHSEDSLALD 112
           SK  + R      +   L  SP R    T  F   GG  R SG       K +E   ALD
Sbjct: 32  SKLCSLRLSKTELSFTNLTPSPRRAFAVTCRFGGGGGGYRFSGDNRRGRPKEAEIDEALD 91

Query: 113 VSSIRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRY 172
           +SSIRS  VRLID QQNM+G+V K +A++MA+DAELDLV+LSPDADPPVV++MDYSKYRY
Sbjct: 92  ISSIRSATVRLIDGQQNMLGLVSKDEAVRMADDAELDLVILSPDADPPVVKMMDYSKYRY 151

Query: 173 DLQKKKREQQKKSAATRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGR 232
           + QK+K++QQKK+  TRMDLKELKMGY IDQHDYSVRLRAA+KFLQDGDKVKVIV++KGR
Sbjct: 152 EQQKRKKDQQKKT--TRMDLKELKMGYNIDQHDYSVRLRAAQKFLQDGDKVKVIVSMKGR 211

Query: 233 ENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPA 292
           ENEFR IAIEL++RFQ E+GELATEE+KNFRDRN+FI+L PNK +++K QEPP +K K  
Sbjct: 212 ENEFRNIAIELLRRFQTEIGELATEESKNFRDRNMFIILVPNKEMIRKPQEPPTRKKKKT 271

[Close]

BLAST of Csor.00g209230 vs. TAIR 10
Match: AT4G30690.2 (Translation initiation factor 3 protein )

HSP 1 Score: 230.7 bits (587), Expect = 1.6e-60
Identity = 131/225 (58.22%), Postives = 156/225 (69.33%), Query Frame = 0


Query: 78  SVFARYGGAPRSSGPAGS----------KHSEDSLALDVSSIRSNNVRLIDEQQNMVGIV 137
           ++  RYGG     G  GS          K SED  +LD+S+IRS  VRLID+QQNM+G+V
Sbjct: 54  AITCRYGG----GGGGGSRFPGDRRGRQKESEDDDSLDISAIRSATVRLIDDQQNMIGLV 113

Query: 138 PKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSAATRMDLKE 197
            K +A++ AEDAELDLV+LSPDADPPVVR+MDYS                          
Sbjct: 114 SKEEAVRRAEDAELDLVILSPDADPPVVRMMDYS-------------------------- 173

Query: 198 LKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKRFQEELGEL 257
               Y IDQHDYSVR+RAA+KFLQDGDKVKVIVN+KGRENEFR IAIEL++RFQ E+GEL
Sbjct: 174 ----YNIDQHDYSVRMRAARKFLQDGDKVKVIVNMKGRENEFRNIAIELLRRFQTEIGEL 233

Query: 258 ATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSA 293
            TEE+KNFRDRN+FIVL PNK V++K QEPP KK K  A ++VSA
Sbjct: 234 GTEESKNFRDRNLFIVLVPNKEVIRKVQEPPPKKKKKPADDKVSA 244

[Close]

BLAST of Csor.00g209230 vs. TAIR 10
Match: AT1G34360.1 (translation initiation factor 3 (IF-3) family protein )

HSP 1 Score: 57.0 bits (136), Expect = 3.1e-08
Identity = 66/205 (32.20%), Postives = 104/205 (50.73%), Query Frame = 0


Query: 109 IRSNNVRLIDEQQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQ 168
           I  + VRL+ E+ + V  V   +A++ A++ + DLV +  DA PPV +I+ YS   Y   
Sbjct: 90  ITGDYVRLVSEEGHCV--VSLREALRRAKELQCDLVEVQRDAKPPVCKIVKYSLELYKKA 149

Query: 169 K--KKREQQKKSAATRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIV---NLK 228
           K  K+R + K++ A R D+KE++   KI+  D   +   A K ++ G +VK +      K
Sbjct: 150 KVGKERAKAKRAEAIRPDIKEIRFTPKIEAKDLKFKSDQALKLMESGYRVKCLAVPDKDK 209

Query: 229 GRENEFRKIAIELVKRFQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKK--- 288
            +E E  K+ +EL+ RF   +G+ A  E+    DR   +V+     V      PPKK   
Sbjct: 210 HKELEPEKL-LELLFRFTCFIGD-ALVESWPEADRKGAVVI-----VRHAKFGPPKKGGV 269

Query: 289 ---KD---KPAAVNEVSARVEVSEA 300
              KD   K A V E S + + S+A
Sbjct: 270 KLMKDIDIKSARVKEESPKPDSSKA 285

The following BLAST results are available for this feature:

BLAST of Csor.00g209230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94B52	1.3e-75	68.44	Translation initiation factor IF3-4, chloroplastic OS=Arabidopsis thaliana OX=37...	[more]
O82234	3.1e-74	63.97	Translation initiation factor IF3-2, chloroplastic OS=Arabidopsis thaliana OX=37...	[more]
B2IY66	3.3e-31	46.01	Translation initiation factor IF-3 OS=Nostoc punctiforme (strain ATCC 29133 / PC...	[more]
Q8YNE3	1.3e-30	44.72	Translation initiation factor IF-3 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / ...	[more]
Q3MBH6	1.3e-30	44.72	Translation initiation factor IF-3 OS=Trichormus variabilis (strain ATCC 29413 /...	[more]

BLAST of Csor.00g209230 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6599141.1	2.43e-195	100.00	Translation initiation factor IF3-2, chloroplastic, partial [Cucurbita argyrospe...	[more]
XP_022946541.1	3.06e-190	98.03	translation initiation factor IF3-4, chloroplastic-like [Cucurbita moschata]	[more]
XP_023547209.1	4.31e-185	95.74	translation initiation factor IF3-4, chloroplastic-like [Cucurbita pepo subsp. p...	[more]
XP_022999741.1	2.90e-183	95.08	translation initiation factor IF3-4, chloroplastic-like [Cucurbita maxima]	[more]
XP_038891171.1	1.00e-150	82.67	translation initiation factor IF3-4, chloroplastic [Benincasa hispida]	[more]

BLAST of Csor.00g209230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G3Y5	1.48e-190	98.03	Translation initiation factor IF-3 OS=Cucurbita moschata OX=3662 GN=LOC111450575...	[more]
A0A6J1KDY9	1.41e-183	95.08	Translation initiation factor IF-3 OS=Cucurbita maxima OX=3661 GN=LOC111493999 P...	[more]
A0A6J1DYM5	1.99e-149	81.69	Translation initiation factor IF-3 OS=Momordica charantia OX=3673 GN=LOC11102471...	[more]
A0A1S3BV82	2.22e-145	80.67	Translation initiation factor IF-3 OS=Cucumis melo OX=3656 GN=LOC103493630 PE=3 ...	[more]
A0A0A0LH34	3.39e-145	79.87	Translation initiation factor IF-3 OS=Cucumis sativus OX=3659 GN=Csa_2G036070 PE...	[more]

BLAST of Csor.00g209230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30690.1	9.1e-77	68.44	Translation initiation factor 3 protein	[more]
AT2G24060.1	2.2e-75	63.97	Translation initiation factor 3 protein	[more]
AT4G30690.2	1.6e-60	58.22	Translation initiation factor 3 protein	[more]
AT1G34360.1	3.1e-08	32.20	translation initiation factor 3 (IF-3) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001288	Translation initiation factor 3	TIGRFAM	TIGR00168	TIGR00168	coord: 108..268 e-value: 8.3E-48 score: 160.1
IPR001288	Translation initiation factor 3	PANTHER	PTHR10938	TRANSLATION INITIATION FACTOR IF-3	coord: 74..290
IPR001288	Translation initiation factor 3	HAMAP	MF_00080	IF_3	coord: 94..269 score: 23.067238
IPR036788	Translation initiation factor 3 (IF-3), C-terminal domain superfamily	GENE3D	3.30.110.10		coord: 178..275 e-value: 2.3E-24 score: 87.2
IPR036788	Translation initiation factor 3 (IF-3), C-terminal domain superfamily	SUPERFAMILY	55200	Translation initiation factor IF3, C-terminal domain	coord: 183..268
IPR019815	Translation initiation factor 3, C-terminal	PFAM	PF00707	IF3_C	coord: 184..267 e-value: 2.1E-23 score: 82.1
IPR036787	Translation initiation factor 3 (IF-3), N-terminal domain superfamily	GENE3D	3.10.20.80		coord: 107..176 e-value: 2.3E-28 score: 100.1
IPR036787	Translation initiation factor 3 (IF-3), N-terminal domain superfamily	SUPERFAMILY	54364	Translation initiation factor IF3, N-terminal domain	coord: 108..176
IPR019814	Translation initiation factor 3, N-terminal	PFAM	PF05198	IF3_N	coord: 108..174 e-value: 2.8E-26 score: 91.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 272..305
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 274..288
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..40
None	No IPR available	PANTHER	PTHR10938:SF6	TRANSLATION INITIATION FACTOR IF-3	coord: 74..290
IPR019813	Translation initiation factor 3, conserved site	PROSITE	PS00938	IF3	coord: 156..169

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g209230.m01	Csor.00g209230.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032790	ribosome disassembly
biological_process	GO:0006413	translational initiation
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0043022	ribosome binding
molecular_function	GO:0003743	translation initiation factor activity