Csor.00g208470 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g208470
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	U4/U6 small nuclear ribonucleoprotein PRP4-like protein
Location	Csor_Chr05: 7909064 .. 7913113 (-)
RNA-Seq Expression	Csor.00g208470
Synteny	Csor.00g208470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGTTGATGATCAAAACCCTGCATCAACTGCTGCTGAATCTCCTGAAATCCTTCCTGGTGGTGAAAATGAGGATCTTGATAATCCAGCAGAACCAATGCAACCTGCAGCTACAACAGTTATTCCATCTTCAATTGTGCCTTCCATTGCTCCCATCCCCCCTCCTCTAATTACACGTCCATTGGCTCCTCTTCCGAGCCGGCCTCTCCTCTTCAGGCCCCCTGTAGCACAAAATGGGGAGATGAGAACAAGTGACTCTGACTCGGAACACGATGAATTGGCTCCTTCCCGTGCGACTCAAGGTTCAACTGCAGAATATGAAGTATCAGAAGAGAGCAGACAGGTAAGAGAGCGTCAGGAAAAAGCCATGCAGGAATTTCTGATGAAGCGCCGTGCTTCTGCTCTAGCAGTACCTACTAATGACATGGCTGTTCGAGCCCGTCTTCGTCGTCTTGGTGAACCCATAACTCTTTTTGGAGAAAGAGAAATGGAAAGGCGGGATAGGTTGCGATCAATAATGGCACGTTTAGATGCTGAAGGGCAATTAGAGAAGCTGTTGAAAGTTCATGAAGAAGAGGAGGCTGCAGCTACTGGTGGAACTGAGGAGGCTGAGGAAGAAGTGCTTCAGTATCCTTTTTATACTGAGGGGCCCAAGGCTCTCTTGGATGCAAGAATTGATATTGCAAAATATTCGATCGTAAGAGCAGCTTCACGTCTTGAGCGTGCTAAGAGGAAAAGGGATGATCCAGATGAAGATGTGGAAGCTGAAATGGATTGGGCTCTGAGACAGGCTGAAAGTTTGGTTCTGGACTGCAGTGAGATAGGAGATGATCGACCACTTTCTGGTTGCTCTTTCTCGTCTGATGGAAAATTCCTTGCCACTAGGTAACCTTCATGTATTTGCAGTTACTAACTAATACCAGTTTCTCCTCTTCAATATCATCCCCATTTTACCTACTGATAGATGAAAAAAGAAACAGAAGGAAAAAGAAAAAGAAAATAGAAAAGTTGATTGTGGCTATAGATTAACTGTTATCCTCCTACTTAACCATAATTTAACGTATGATTGAAGGTTTTTTCATTTTCCACTCCATTACTTGATAGGCTTTGTATTTAGCTTTCGTTTTACTTTTCTGCTGAAAGTTTTCGTCTATGTGATGCTTTTTGTATTTTTCTTGTTTAATTTCTTTAGTTCATTAAGTGGAGTTGCGAAAATGTGGAGCATGCCTCAAGTAAGGAAGGTTTCCAACTTTAATGGACACACAGAGCGGGTTACTGATGTAATATTTTCTCCAGTGAACGAGTGTTTAGCAACTGCCTCTGCTGACCGAACTGCAAGGTTGTGGTCTGCTGAAGGGTCTCTCCTTAGAACATTTGAGGGCCATCTGGACCGCCTTGCACGGATTGCCTTCCACCCATCAGGTAAGTACTTGGGCACCACTAGCTTCGACAAGACGTGGAGATTATGGGACATTGAAACTGGTGTAGAGTTGCTTCTTCAAGAAGGTCATAGTAGAAGTGTTTATGGCATAGACTTCCACCATGATGGATCTTTAGTATCATCTTGTGGACTTGATGCACTTGCTCGTGTTTGGGACCTTCGAACTGGTAGAAGTGTTCTTGCCTTAGAAGGCCACGTCAAGCCAGTAAATCTCTTTCCTTTCTTACATTGGGATCGTACATTTATTTTTAATAAATTTCACTTGTTTGTTCCTGACTGATACCTTGCTTTCATCAGGTCCTTGGAGTTAATTTTTCACCCAATGGTTATCATTTAGCTACTGGTGGTGAAGATAACACCTGTCGGATATGGGATTTGAGGAAGAAAAGATCTCTTTATATAATACCTGCACACTCAAACCTTATTTCACAGGTGAAATATGAGCCTCAAGAGGGATACTTCTTGGTAACTGCATCATTTGATATGACTGCAAAGGTATTTTTGAACACTTCAGGATGATATATTATCGTTCAAGACGTTATGTTTTCATTTGGTTGTTGCTTCCTCTCACTTTAGTCAAAGGCTTCACTTTTTAATCTTTTTTTTTTTTTTTTTTTTTTGCAGATTTGGTCTGCTCGTGATTTTAAGCCTGTGAAGACACTCTCTGGCCACGAAGCAAAAGTTACATCTTTGGATATAATTTCAGGTTAGTTATTTATCAACTCCTTGGTCATTATTAGTATTACTATTATTTACAAATATTACCACCTAGGTTATTGTTGCACACCATTTTGCATTCTTCTATGGTATTTTCCACACGCCTGTATTTAGCATAAACTTGAGTTCATAGATATCACTAATGTCTCAGACTACCTTGGGGGGTGAGTGAAAGGTACAATCATGCAAGAAACTATACCTTATGCTGCTGTACGTTCTTTGCTTGGAGTAACACCTGATAGATTGTTTTCTATGGGAAAGCTTTTTTAACAATCTCAATTTTTCTAGCATGGAGTTGTTTCCTTTAGCTCTATTGTAAGGAATTGATGACATAGACACTAGTTATGTACATGTTTTTATAAAATTCAATGTCAATAATTTTCTTGGTAAAATAAACTAATGTGCTTGAAAAGCATTTCAGAATGTAAGTAAGGATGATAATCTGTTAGGTTTGATGACGTTTGTCCTGCCTGTATCTACAAGATAGAATGTGGCTGGGGTTTCCAGATTGCAAAAACCCAAAAACTATTATCACTAATTTAGTCTGCCTTTGAAGTTGTCCCTCCCATGTTCTTTCTGGCTGTTGATATCCCGATTAGAATTGAATTCTACTTGAGAGGGGTAGGGGGGACATCCTTGGGTGGTTTGAGGCGGGGAGGTATGGGAAGGGATAATGTCTTACTGTCCCACAGTCGGTTTTCTGATGGCACGACCTTCTTTTATTGATACGGGGTAGCGCCAATTGTTTGTCTAAACTACATCGTGTGCCTTTTGAAGGCTATGTCTGGTTTGAAGATTAACAAAAGCATGTGTCATTTGAAATACAAGAGTCTTTTCAAGTATATACAATTCTTTTATTTGTTTTTGTGATCTTGTACAGTTCACAGTCACTAATTTCTTTTTTTTGTAATTTCTCCACTTTCTTCTTCAACTTAGATTGGAAGATTTCTTTCAAATTTTAGAATCTTGTATTTTTTTGGGGGGCACATTTTCATGGAGAGAAATGAAAGAATTTACAAAAGCATACCAAAAAAGGAGAGCCTAACAAAAAAATTACAGTCTTGACCCCTAACTACAAAAATGGACTCCAATTCAAAAGAACAAGATCAAAGTCATAAGTACAAAAAGAATCTGGTTACTGACGCCTATATGTGGAAATAAACCTAGTCACCTTCAAACTTACCTGGTCTCTCCACCTCTCCAAAATTCTATTATTCCTTTTAAGCTAAATTTCCCACAAAACTTCTAAGAAACTAGTCAACCACAAAATTTTACCCTTCCCCTGAAGAGAGAACTCAAAAGCACTTCTTCCAACTCAACCTTGCTATCTCCGTTCCAAGCCCAACAAACACCAAACGATCTCAGCCAACCACTCCAAAGTTGGTGAGTGAACTGAGAGTTCCAAAACAAATGATCTAGGTCTTCCTCATATATCATACAAAGAATTTACCATTGTGGGAACAAAACATAGGAAAAGTGCCTTTGAACACAGTCATTGGTACTAAGGCTTTAGGAAATTATGGACAACTTTTTTTGTGACGAGTAAAACGTTAGAATGTGTTTGAATGGAATTTGCTTGTGTGTATTACTTCAACCATAAAAGAGTTCATCCATTTTTCTTTTGTTTTAATGTGAATGGTTACCCAATGCATCATTAACACTAAGAGTCCTCAGTAAGCTTATAGATTGTATGCTGAAAATACTTTAAGGAATTTGATTATGTTGTATACACCTTCTCTTGGGTTTGAATGATGGACGTCTGCCGCTGATATCCAATTATTATTTTGTTCAATAACAGATGGACAGTGTATTGCAACTGTCTCGCACGATCGGACCATAAAGCTCTGGTCTGTCAATAGCAAAGATGAACAAACTATGGACGTTGATTGA

mRNA sequence

ATGGATGTTGATGATCAAAACCCTGCATCAACTGCTGCTGAATCTCCTGAAATCCTTCCTGGTGGTGAAAATGAGGATCTTGATAATCCAGCAGAACCAATGCAACCTGCAGCTACAACAGTTATTCCATCTTCAATTGTGCCTTCCATTGCTCCCATCCCCCCTCCTCTAATTACACGTCCATTGGCTCCTCTTCCGAGCCGGCCTCTCCTCTTCAGGCCCCCTGTAGCACAAAATGGGGAGATGAGAACAAGTGACTCTGACTCGGAACACGATGAATTGGCTCCTTCCCGTGCGACTCAAGGTTCAACTGCAGAATATGAAGTATCAGAAGAGAGCAGACAGGTAAGAGAGCGTCAGGAAAAAGCCATGCAGGAATTTCTGATGAAGCGCCGTGCTTCTGCTCTAGCAGTACCTACTAATGACATGGCTGTTCGAGCCCGTCTTCGTCGTCTTGGTGAACCCATAACTCTTTTTGGAGAAAGAGAAATGGAAAGGCGGGATAGGTTGCGATCAATAATGGCACGTTTAGATGCTGAAGGGCAATTAGAGAAGCTGTTGAAAGTTCATGAAGAAGAGGAGGCTGCAGCTACTGGTGGAACTGAGGAGGCTGAGGAAGAAGTGCTTCAGTATCCTTTTTATACTGAGGGGCCCAAGGCTCTCTTGGATGCAAGAATTGATATTGCAAAATATTCGATCGTAAGAGCAGCTTCACGTCTTGAGCGTGCTAAGAGGAAAAGGGATGATCCAGATGAAGATGTGGAAGCTGAAATGGATTGGGCTCTGAGACAGGCTGAAAGTTTGGTTCTGGACTGCAGTGAGATAGGAGATGATCGACCACTTTCTGGTTGCTCTTTCTCGTCTGATGGAAAATTCCTTGCCACTAGTTCATTAAGTGGAGTTGCGAAAATGTGGAGCATGCCTCAAGTAAGGAAGGTTTCCAACTTTAATGGACACACAGAGCGGGTTACTGATGTAATATTTTCTCCAGTGAACGAGTGTTTAGCAACTGCCTCTGCTGACCGAACTGCAAGGTTGTGGTCTGCTGAAGGGTCTCTCCTTAGAACATTTGAGGGCCATCTGGACCGCCTTGCACGGATTGCCTTCCACCCATCAGGTAAGTACTTGGGCACCACTAGCTTCGACAAGACGTGGAGATTATGGGACATTGAAACTGGTGTAGAGTTGCTTCTTCAAGAAGGTCATAGTAGAAGTGTTTATGGCATAGACTTCCACCATGATGGATCTTTAGTATCATCTTGTGGACTTGATGCACTTGCTCGTGTTTGGGACCTTCGAACTGGTAGAAGTGTTCTTGCCTTAGAAGGCCACGTCAAGCCAGTCCTTGGAGTTAATTTTTCACCCAATGGTTATCATTTAGCTACTGGTGGTGAAGATAACACCTGTCGGATATGGGATTTGAGGAAGAAAAGATCTCTTTATATAATACCTGCACACTCAAACCTTATTTCACAGGTGAAATATGAGCCTCAAGAGGGATACTTCTTGGTAACTGCATCATTTGATATGACTGCAAAGATTTGGTCTGCTCGTGATTTTAAGCCTGTGAAGACACTCTCTGGCCACGAAGCAAAAGTTACATCTTTGGATATAATTTCAGATGGACAGTGTATTGCAACTGTCTCGCACGATCGGACCATAAAGCTCTGGTCTGTCAATAGCAAAGATGAACAAACTATGGACGTTGATTGA

Coding sequence (CDS)

ATGGATGTTGATGATCAAAACCCTGCATCAACTGCTGCTGAATCTCCTGAAATCCTTCCTGGTGGTGAAAATGAGGATCTTGATAATCCAGCAGAACCAATGCAACCTGCAGCTACAACAGTTATTCCATCTTCAATTGTGCCTTCCATTGCTCCCATCCCCCCTCCTCTAATTACACGTCCATTGGCTCCTCTTCCGAGCCGGCCTCTCCTCTTCAGGCCCCCTGTAGCACAAAATGGGGAGATGAGAACAAGTGACTCTGACTCGGAACACGATGAATTGGCTCCTTCCCGTGCGACTCAAGGTTCAACTGCAGAATATGAAGTATCAGAAGAGAGCAGACAGGTAAGAGAGCGTCAGGAAAAAGCCATGCAGGAATTTCTGATGAAGCGCCGTGCTTCTGCTCTAGCAGTACCTACTAATGACATGGCTGTTCGAGCCCGTCTTCGTCGTCTTGGTGAACCCATAACTCTTTTTGGAGAAAGAGAAATGGAAAGGCGGGATAGGTTGCGATCAATAATGGCACGTTTAGATGCTGAAGGGCAATTAGAGAAGCTGTTGAAAGTTCATGAAGAAGAGGAGGCTGCAGCTACTGGTGGAACTGAGGAGGCTGAGGAAGAAGTGCTTCAGTATCCTTTTTATACTGAGGGGCCCAAGGCTCTCTTGGATGCAAGAATTGATATTGCAAAATATTCGATCGTAAGAGCAGCTTCACGTCTTGAGCGTGCTAAGAGGAAAAGGGATGATCCAGATGAAGATGTGGAAGCTGAAATGGATTGGGCTCTGAGACAGGCTGAAAGTTTGGTTCTGGACTGCAGTGAGATAGGAGATGATCGACCACTTTCTGGTTGCTCTTTCTCGTCTGATGGAAAATTCCTTGCCACTAGTTCATTAAGTGGAGTTGCGAAAATGTGGAGCATGCCTCAAGTAAGGAAGGTTTCCAACTTTAATGGACACACAGAGCGGGTTACTGATGTAATATTTTCTCCAGTGAACGAGTGTTTAGCAACTGCCTCTGCTGACCGAACTGCAAGGTTGTGGTCTGCTGAAGGGTCTCTCCTTAGAACATTTGAGGGCCATCTGGACCGCCTTGCACGGATTGCCTTCCACCCATCAGGTAAGTACTTGGGCACCACTAGCTTCGACAAGACGTGGAGATTATGGGACATTGAAACTGGTGTAGAGTTGCTTCTTCAAGAAGGTCATAGTAGAAGTGTTTATGGCATAGACTTCCACCATGATGGATCTTTAGTATCATCTTGTGGACTTGATGCACTTGCTCGTGTTTGGGACCTTCGAACTGGTAGAAGTGTTCTTGCCTTAGAAGGCCACGTCAAGCCAGTCCTTGGAGTTAATTTTTCACCCAATGGTTATCATTTAGCTACTGGTGGTGAAGATAACACCTGTCGGATATGGGATTTGAGGAAGAAAAGATCTCTTTATATAATACCTGCACACTCAAACCTTATTTCACAGGTGAAATATGAGCCTCAAGAGGGATACTTCTTGGTAACTGCATCATTTGATATGACTGCAAAGATTTGGTCTGCTCGTGATTTTAAGCCTGTGAAGACACTCTCTGGCCACGAAGCAAAAGTTACATCTTTGGATATAATTTCAGATGGACAGTGTATTGCAACTGTCTCGCACGATCGGACCATAAAGCTCTGGTCTGTCAATAGCAAAGATGAACAAACTATGGACGTTGATTGA

Protein sequence

MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITRPLAPLPSRPLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEGQLEKLLKVHEEEEAAATGGTEEAEEEVLQYPFYTEGPKALLDARIDIAKYSIVRAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGVAKMWSMPQVRKVSNFNGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLRTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIDFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGYHLATGGEDNTCRIWDLRKKRSLYIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISDGQCIATVSHDRTIKLWSVNSKDEQTMDVD

Homology

[Close]

BLAST of Csor.00g208470 vs. ExPASy Swiss-Prot
Match: O22212 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Arabidopsis thaliana OX=3702 GN=LIS PE=2 SV=1)

HSP 1 Score: 713.8 bits (1841), Expect = 1.6e-204
Identity = 358/550 (65.09%), Postives = 434/550 (78.91%), Query Frame = 0


Query: 31  AEPMQPAATTVIPSSIVPSIAP--IPPPLITRPLAPLP--SRPLLFRPPVAQNGEMRTSD 90
           A P+   A+++   S +P + P   PPP+   P+ P P  +RP  FRPPV+QNG ++TSD
Sbjct: 19  APPVLQDASSLPGFSAIPPVVPPSFPPPMAPIPMMPHPPVARPPTFRPPVSQNGGVKTSD 78

Query: 91  SDSEHDELAPSRATQGSTAEYEVSEESRQVRERQEKAMQEFLMKRRASALAVPTNDMAVR 150
           SDSE D+              E+SEES+QVRERQEKA+Q+ L+KRRA+A+AVPTND AVR
Sbjct: 79  SDSESDD-----------EHIEISEESKQVRERQEKALQDLLVKRRAAAMAVPTNDKAVR 138

Query: 151 ARLRRLGEPITLFGEREMERRDRLRSIMARLDAEGQLEKLLKVHEEEEAAATGGTEEAEE 210
            RLRRLGEPITLFGE+EMERR RL  ++ R D  GQL+KL+K HEE+        EE ++
Sbjct: 139 DRLRRLGEPITLFGEQEMERRARLTQLLTRYDINGQLDKLVKDHEEDVTP----KEEVDD 198

Query: 211 EVLQYPFYTEGPKALLDARIDIAKYSIVRAASRLERAKRKRDDPDEDVEAEMDWALRQAE 270
           EVL+YPF+TEGPK L +ARI+IAK+S+ RAA R++RAKR+RDDPDED++AE  WAL+ A+
Sbjct: 199 EVLEYPFFTEGPKELREARIEIAKFSVKRAAVRIQRAKRRRDDPDEDMDAETKWALKHAK 258

Query: 271 SLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGVAKMWSMPQV-RKVSNFNGHTERVTD 330
            + LDCS  GDDRPL+GCSFS DGK LAT SLSGV K+W MPQV   ++    H ER TD
Sbjct: 259 HMALDCSNFGDDRPLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATD 318

Query: 331 VIFSPVNECLATASADRTARLWSAEGSLLRTFEGHLDRLARIAFHPSGKYLGTTSFDKTW 390
           V+FSPV++CLATASADRTA+LW  +G+LL+TFEGHLDRLAR+AFHPSGKYLGTTS+DKTW
Sbjct: 319 VVFSPVDDCLATASADRTAKLWKTDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTW 378

Query: 391 RLWDIETGVELLLQEGHSRSVYGIDFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHV 450
           RLWDI TG ELLLQEGHSRSVYGI F  DG+L +SCGLD+LARVWDLRTGRS+L  +GH+
Sbjct: 379 RLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHI 438

Query: 451 KPVLGVNFSPNGYHLATGGEDNTCRIWDLRKKRSLYIIPAHSNLISQVKYEPQEGYFLVT 510
           KPV  VNFSPNGYHLA+GGEDN CRIWDLR ++SLYIIPAH+NL+SQVKYEPQEGYFL T
Sbjct: 439 KPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLAT 498

Query: 511 ASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISDGQCIATVSHDRTIKLWSVNSKDE- 570
           AS+DM   IWS RDF  VK+L+GHE+KV SLDI +D  CIATVSHDRTIKLW+ +  D+ 
Sbjct: 499 ASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWTSSGNDDE 553

[Close]

BLAST of Csor.00g208470 vs. ExPASy Swiss-Prot
Match: Q3MHE2 (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Bos taurus OX=9913 GN=PRPF4 PE=2 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 7.3e-117
Identity = 217/459 (47.28%), Postives = 298/459 (64.92%), Query Frame = 0


Query: 108 EVSEESRQVRERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERR 167
           EV E    + ERQ + + EF  ++RA  + V T+D  V+A LR LGEPITLFGE   ERR
Sbjct: 70  EVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERR 129

Query: 168 DRLRSIMARLDAEGQLEKLLKVHEEEEAAATGGTEEAEEEVLQYPFYTEGPKALLDARID 227
           +RLR+I++ +  +     L K  +++E +      +  +E  Q  +Y EGP +L  AR+ 
Sbjct: 130 ERLRNILSVVGTDA----LKKTKKDDEKS------KKSKEEYQQTWYHEGPHSLKVARLW 189

Query: 228 IAKYSIVRAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFS 287
           IA YS+ RA  RLE A+  ++ P+    ++M    +   SL   CS+IGDDRP+S C FS
Sbjct: 190 IANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFS 249

Query: 288 SDGKFLATSSLSGVAKMWSMPQVRKVSNFNGHTERVTDVIFSPVNEC--------LATAS 347
            + K LAT+  SG+ K+WS+P    +    GH   V  ++F P +          LA+ +
Sbjct: 250 PNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCA 309

Query: 348 ADRTARLWSAEG-SLLRTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLL 407
           AD + +LWS +    +   EGH  R+AR+ +HPSG++LGTT +D++WRLWD+E   E+L 
Sbjct: 310 ADGSVKLWSLDSDEPVADIEGHTVRVARVTWHPSGRFLGTTCYDRSWRLWDLEAQEEILH 369

Query: 408 QEGHSRSVYGIDFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGY 467
           QEGHS  VY I FH DGSL  + GLDA  RVWDLRTGR ++ LEGH+K + G+NFSPNGY
Sbjct: 370 QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGY 429

Query: 468 HLATGGEDNTCRIWDLRKKRSLYIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSAR 527
           H+ATG  DNTC++WDLR++R +Y IPAH NL++ VK+EP  G FL+T ++D TAKIW+  
Sbjct: 430 HIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHP 489

Query: 528 DFKPVKTLSGHEAKVTSLDIISDGQCIATVSHDRTIKLW 558
            + P+KTL+GHE KV  LDI SDGQ IAT S+DRT KLW
Sbjct: 490 GWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518

[Close]

BLAST of Csor.00g208470 vs. ExPASy Swiss-Prot
Match: O43172 (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Homo sapiens OX=9606 GN=PRPF4 PE=1 SV=2)

HSP 1 Score: 422.5 bits (1085), Expect = 7.3e-117
Identity = 217/459 (47.28%), Postives = 298/459 (64.92%), Query Frame = 0


Query: 108 EVSEESRQVRERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERR 167
           EV E    + ERQ + + EF  ++RA  + V T+D  V+A LR LGEPITLFGE   ERR
Sbjct: 71  EVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERR 130

Query: 168 DRLRSIMARLDAEGQLEKLLKVHEEEEAAATGGTEEAEEEVLQYPFYTEGPKALLDARID 227
           +RLR+I++ +  +     L K  +++E +      +  +E  Q  +Y EGP +L  AR+ 
Sbjct: 131 ERLRNILSVVGTDA----LKKTKKDDEKS------KKSKEEYQQTWYHEGPNSLKVARLW 190

Query: 228 IAKYSIVRAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFS 287
           IA YS+ RA  RLE A+  ++ P+    ++M    +   SL   CS+IGDDRP+S C FS
Sbjct: 191 IANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFS 250

Query: 288 SDGKFLATSSLSGVAKMWSMPQVRKVSNFNGHTERVTDVIFSPVNEC--------LATAS 347
            + K LAT+  SG+ K+WS+P    +    GH   V  ++F P +          LA+ +
Sbjct: 251 PNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDPKDVNLASCA 310

Query: 348 ADRTARLWSAEG-SLLRTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLL 407
           AD + +LWS +    +   EGH  R+AR+ +HPSG++LGTT +D++WRLWD+E   E+L 
Sbjct: 311 ADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILH 370

Query: 408 QEGHSRSVYGIDFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGY 467
           QEGHS  VY I FH DGSL  + GLDA  RVWDLRTGR ++ LEGH+K + G+NFSPNGY
Sbjct: 371 QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGY 430

Query: 468 HLATGGEDNTCRIWDLRKKRSLYIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSAR 527
           H+ATG  DNTC++WDLR++R +Y IPAH NL++ VK+EP  G FL+T ++D TAKIW+  
Sbjct: 431 HIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHP 490

Query: 528 DFKPVKTLSGHEAKVTSLDIISDGQCIATVSHDRTIKLW 558
            + P+KTL+GHE KV  LDI SDGQ IAT S+DRT KLW
Sbjct: 491 GWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 519

[Close]

BLAST of Csor.00g208470 vs. ExPASy Swiss-Prot
Match: Q5NVD0 (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Pongo abelii OX=9601 GN=PRPF4 PE=2 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 7.3e-117
Identity = 217/459 (47.28%), Postives = 298/459 (64.92%), Query Frame = 0


Query: 108 EVSEESRQVRERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERR 167
           EV E    + ERQ + + EF  ++RA  + V T+D  V+A LR LGEPITLFGE   ERR
Sbjct: 70  EVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERR 129

Query: 168 DRLRSIMARLDAEGQLEKLLKVHEEEEAAATGGTEEAEEEVLQYPFYTEGPKALLDARID 227
           +RLR+I++ +  +     L K  +++E +      +  +E  Q  +Y EGP +L  AR+ 
Sbjct: 130 ERLRNILSVVGTDA----LKKTKKDDEKS------KKSKEEYQQTWYHEGPNSLKVARLW 189

Query: 228 IAKYSIVRAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFS 287
           IA YS+ RA  RLE A+  ++ P+    ++M    +   SL   CS+IGDDRP+S C FS
Sbjct: 190 IANYSLPRAMKRLEEARLHKEIPETTRASQMQELHKSLRSLNNFCSQIGDDRPISYCHFS 249

Query: 288 SDGKFLATSSLSGVAKMWSMPQVRKVSNFNGHTERVTDVIFSPVNEC--------LATAS 347
            + K LAT+  SG+ K+WS+P    +    GH   V  ++F P +          LA+ +
Sbjct: 250 PNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCA 309

Query: 348 ADRTARLWSAEG-SLLRTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLL 407
           AD + +LWS +    +   EGH  R+AR+ +HPSG++LGTT +D++WRLWD+E   E+L 
Sbjct: 310 ADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILH 369

Query: 408 QEGHSRSVYGIDFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGY 467
           QEGHS  VY I FH DGSL  + GLDA  RVWDLRTGR ++ LEGH+K + G+NFSPNGY
Sbjct: 370 QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGY 429

Query: 468 HLATGGEDNTCRIWDLRKKRSLYIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSAR 527
           H+ATG  DNTC++WDLR++R +Y IPAH NL++ VK+EP  G FL+T ++D TAKIW+  
Sbjct: 430 HIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHP 489

Query: 528 DFKPVKTLSGHEAKVTSLDIISDGQCIATVSHDRTIKLW 558
            + P+KTL+GHE KV  LDI SDGQ IAT S+DRT KLW
Sbjct: 490 GWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518

[Close]

BLAST of Csor.00g208470 vs. ExPASy Swiss-Prot
Match: Q9DAW6 (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Mus musculus OX=10090 GN=Prpf4 PE=1 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 1.3e-116
Identity = 217/459 (47.28%), Postives = 298/459 (64.92%), Query Frame = 0


Query: 108 EVSEESRQVRERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERR 167
           EV E    + ERQ + + EF  ++RA  + V T+D  V+A LR LGEPITLFGE   ERR
Sbjct: 70  EVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERR 129

Query: 168 DRLRSIMARLDAEGQLEKLLKVHEEEEAAATGGTEEAEEEVLQYPFYTEGPKALLDARID 227
           +RLR+I++ +  +     L K  +++E +      +  +E  Q  +Y EGP +L  AR+ 
Sbjct: 130 ERLRNILSVVGTDA----LKKTKKDDEKS------KKSKEEYQQTWYHEGPNSLKVARLW 189

Query: 228 IAKYSIVRAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFS 287
           IA YS+ RA  RLE A+  ++ P+    ++M    +   SL   CS+IGDDRP+S C FS
Sbjct: 190 IANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFS 249

Query: 288 SDGKFLATSSLSGVAKMWSMPQVRKVSNFNGHTERVTDVIFSPVNEC--------LATAS 347
            + K LAT+  SG+ K+WS+P    +    GH   V  ++F P +          LA+ +
Sbjct: 250 PNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCA 309

Query: 348 ADRTARLWSAEG-SLLRTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLL 407
           AD + +LWS +    +   EGH  R+AR+ +HPSG++LGTT +D++WRLWD+E   E+L 
Sbjct: 310 ADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILH 369

Query: 408 QEGHSRSVYGIDFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGY 467
           QEGHS  VY I FH DGSL  + GLDA  RVWDLRTGR ++ LEGH+K + G+NFSPNGY
Sbjct: 370 QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGY 429

Query: 468 HLATGGEDNTCRIWDLRKKRSLYIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSAR 527
           H+ATG  DNTC++WDLR++R +Y IPAH NL++ VK+EP  G FL+T ++D TAKIW+  
Sbjct: 430 HIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHP 489

Query: 528 DFKPVKTLSGHEAKVTSLDIISDGQCIATVSHDRTIKLW 558
            + P+KTL+GHE KV  LDI SDGQ IAT S+DRT KLW
Sbjct: 490 GWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518

[Close]

BLAST of Csor.00g208470 vs. NCBI nr
Match: KAG6599065.1 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1106 bits (2861), Expect = 0.0
Identity = 570/570 (100.00%), Postives = 570/570 (100.00%), Query Frame = 0


Query: 1   MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITR 60
           MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITR
Sbjct: 1   MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITR 60

Query: 61  PLAPLPSRPLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ 120
           PLAPLPSRPLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ
Sbjct: 61  PLAPLPSRPLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ 120

Query: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180
           EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE
Sbjct: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180

Query: 181 GQLEKLLKVHEEEEAAATGGTEEAEEEVLQYPFYTEGPKALLDARIDIAKYSIVRAASRL 240
           GQLEKLLKVHEEEEAAATGGTEEAEEEVLQYPFYTEGPKALLDARIDIAKYSIVRAASRL
Sbjct: 181 GQLEKLLKVHEEEEAAATGGTEEAEEEVLQYPFYTEGPKALLDARIDIAKYSIVRAASRL 240

Query: 241 ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300
           ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG
Sbjct: 241 ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300

Query: 301 VAKMWSMPQVRKVSNFNGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLRTFEGH 360
           VAKMWSMPQVRKVSNFNGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLRTFEGH
Sbjct: 301 VAKMWSMPQVRKVSNFNGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLRTFEGH 360

Query: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIDFHHDGSLVSS 420
           LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIDFHHDGSLVSS
Sbjct: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIDFHHDGSLVSS 420

Query: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGYHLATGGEDNTCRIWDLRKKRSL 480
           CGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGYHLATGGEDNTCRIWDLRKKRSL
Sbjct: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGYHLATGGEDNTCRIWDLRKKRSL 480

Query: 481 YIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540
           YIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS
Sbjct: 481 YIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540

Query: 541 DGQCIATVSHDRTIKLWSVNSKDEQTMDVD 570
           DGQCIATVSHDRTIKLWSVNSKDEQTMDVD
Sbjct: 541 DGQCIATVSHDRTIKLWSVNSKDEQTMDVD 570

[Close]

BLAST of Csor.00g208470 vs. NCBI nr
Match: XP_022946187.1 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucurbita moschata])

HSP 1 Score: 1106 bits (2860), Expect = 0.0
Identity = 569/570 (99.82%), Postives = 570/570 (100.00%), Query Frame = 0


Query: 1   MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITR 60
           MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITR
Sbjct: 1   MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITR 60

Query: 61  PLAPLPSRPLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ 120
           PLAPLPSRPLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ
Sbjct: 61  PLAPLPSRPLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ 120

Query: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180
           EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE
Sbjct: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180

Query: 181 GQLEKLLKVHEEEEAAATGGTEEAEEEVLQYPFYTEGPKALLDARIDIAKYSIVRAASRL 240
           GQLEKLLKVHEEEEAAATGGTEEAEEEVLQYPFYTEGPKALLDARIDIAKYS+VRAASRL
Sbjct: 181 GQLEKLLKVHEEEEAAATGGTEEAEEEVLQYPFYTEGPKALLDARIDIAKYSVVRAASRL 240

Query: 241 ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300
           ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG
Sbjct: 241 ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300

Query: 301 VAKMWSMPQVRKVSNFNGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLRTFEGH 360
           VAKMWSMPQVRKVSNFNGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLRTFEGH
Sbjct: 301 VAKMWSMPQVRKVSNFNGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLRTFEGH 360

Query: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIDFHHDGSLVSS 420
           LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIDFHHDGSLVSS
Sbjct: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIDFHHDGSLVSS 420

Query: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGYHLATGGEDNTCRIWDLRKKRSL 480
           CGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGYHLATGGEDNTCRIWDLRKKRSL
Sbjct: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGYHLATGGEDNTCRIWDLRKKRSL 480

Query: 481 YIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540
           YIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS
Sbjct: 481 YIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540

Query: 541 DGQCIATVSHDRTIKLWSVNSKDEQTMDVD 570
           DGQCIATVSHDRTIKLWSVNSKDEQTMDVD
Sbjct: 541 DGQCIATVSHDRTIKLWSVNSKDEQTMDVD 570

[Close]

BLAST of Csor.00g208470 vs. NCBI nr
Match: XP_022999661.1 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucurbita maxima])

HSP 1 Score: 1102 bits (2851), Expect = 0.0
Identity = 567/570 (99.47%), Postives = 569/570 (99.82%), Query Frame = 0


Query: 1   MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITR 60
           MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITR
Sbjct: 1   MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITR 60

Query: 61  PLAPLPSRPLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ 120
           PLAPLPSRPLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ
Sbjct: 61  PLAPLPSRPLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ 120

Query: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180
           EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE
Sbjct: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180

Query: 181 GQLEKLLKVHEEEEAAATGGTEEAEEEVLQYPFYTEGPKALLDARIDIAKYSIVRAASRL 240
           GQLEKLLKVHEEEEAAATGGTEEAEEEVLQYPFYTEGPKALLDARIDIAKYSIVRAASRL
Sbjct: 181 GQLEKLLKVHEEEEAAATGGTEEAEEEVLQYPFYTEGPKALLDARIDIAKYSIVRAASRL 240

Query: 241 ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300
           ERAKRKRDDPDEDVEAEMDWALRQAESL+LDCSEIGDDRPLSGCSFSSDGKFLATSSLSG
Sbjct: 241 ERAKRKRDDPDEDVEAEMDWALRQAESLILDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300

Query: 301 VAKMWSMPQVRKVSNFNGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLRTFEGH 360
           VAKMWSMPQVRKVSNF GHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLRTFEGH
Sbjct: 301 VAKMWSMPQVRKVSNFKGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLRTFEGH 360

Query: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIDFHHDGSLVSS 420
           LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIDFHHDGSLVSS
Sbjct: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIDFHHDGSLVSS 420

Query: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGYHLATGGEDNTCRIWDLRKKRSL 480
           CGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGYHLATGGEDNTCRIWDLRKK+SL
Sbjct: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGYHLATGGEDNTCRIWDLRKKKSL 480

Query: 481 YIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540
           YIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS
Sbjct: 481 YIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540

Query: 541 DGQCIATVSHDRTIKLWSVNSKDEQTMDVD 570
           DGQCIATVSHDRTIKLWSVNSKDEQTMDVD
Sbjct: 541 DGQCIATVSHDRTIKLWSVNSKDEQTMDVD 570

[Close]

BLAST of Csor.00g208470 vs. NCBI nr
Match: XP_023525233.1 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1101 bits (2848), Expect = 0.0
Identity = 567/570 (99.47%), Postives = 568/570 (99.65%), Query Frame = 0


Query: 1   MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITR 60
           MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITR
Sbjct: 1   MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITR 60

Query: 61  PLAPLPSRPLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ 120
           PLAPLPSRPLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ
Sbjct: 61  PLAPLPSRPLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ 120

Query: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180
           EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE
Sbjct: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180

Query: 181 GQLEKLLKVHEEEEAAATGGTEEAEEEVLQYPFYTEGPKALLDARIDIAKYSIVRAASRL 240
           GQLEKLLKVHEEEEAAATGGTEEAEEEVLQYPFYTEGPKALLDARIDIAKYSIVRAA+RL
Sbjct: 181 GQLEKLLKVHEEEEAAATGGTEEAEEEVLQYPFYTEGPKALLDARIDIAKYSIVRAAARL 240

Query: 241 ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300
           ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG
Sbjct: 241 ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300

Query: 301 VAKMWSMPQVRKVSNFNGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLRTFEGH 360
           VAKMWSMPQVRKVSNF GHTERVTDVIFSPVNECLATASADRTARLWS EGSLLRTFEGH
Sbjct: 301 VAKMWSMPQVRKVSNFKGHTERVTDVIFSPVNECLATASADRTARLWSTEGSLLRTFEGH 360

Query: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIDFHHDGSLVSS 420
           LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIDFHHDGSLVSS
Sbjct: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIDFHHDGSLVSS 420

Query: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGYHLATGGEDNTCRIWDLRKKRSL 480
           CGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGYHLATGGEDNTCRIWDLRKKRSL
Sbjct: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGYHLATGGEDNTCRIWDLRKKRSL 480

Query: 481 YIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540
           YIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS
Sbjct: 481 YIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540

Query: 541 DGQCIATVSHDRTIKLWSVNSKDEQTMDVD 570
           DGQCIATVSHDRTIKLWSVNSKDEQTMDVD
Sbjct: 541 DGQCIATVSHDRTIKLWSVNSKDEQTMDVD 570

[Close]

BLAST of Csor.00g208470 vs. NCBI nr
Match: XP_038885479.1 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Benincasa hispida] >XP_038885480.1 U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Benincasa hispida])

HSP 1 Score: 1057 bits (2734), Expect = 0.0
Identity = 543/570 (95.26%), Postives = 557/570 (97.72%), Query Frame = 0


Query: 1   MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITR 60
           M+VDDQNPASTAAESPE LPGGENEDLDNPAEP+QPAAT+VIP S+VPSIAPIPPP+I R
Sbjct: 1   MEVDDQNPASTAAESPETLPGGENEDLDNPAEPIQPAATSVIPPSVVPSIAPIPPPII-R 60

Query: 61  PLAPLPSRPLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ 120
           PLAPLPSRP  FRPPV QNGEMRTSDSDSEHDELAPSR   GSTAEYEVSEESRQVRERQ
Sbjct: 61  PLAPLPSRPPHFRPPVTQNGEMRTSDSDSEHDELAPSRTAGGSTAEYEVSEESRQVRERQ 120

Query: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180
           EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE
Sbjct: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180

Query: 181 GQLEKLLKVHEEEEAAATGGTEEAEEEVLQYPFYTEGPKALLDARIDIAKYSIVRAASRL 240
           GQLEKL+KVHEEEEAAATGGTEEAEEEVLQYPFYTEG KALLDARIDIAKYSI+RAASRL
Sbjct: 181 GQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRAASRL 240

Query: 241 ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300
           ERAKRKRDDPDEDVEAEMDWALRQA SLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG
Sbjct: 241 ERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300

Query: 301 VAKMWSMPQVRKVSNFNGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLRTFEGH 360
           VAK+WSMPQVRKVSNF GHTERVTDVIFSPVNECLATASADRTARLWSAEGSLL+TFEGH
Sbjct: 301 VAKLWSMPQVRKVSNFKGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLKTFEGH 360

Query: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIDFHHDGSLVSS 420
           LDRLARIAFHPSGKYLGTTSFDKTWRLWD+ETGVELLLQEGHSRSVYGI FHHDGSLVSS
Sbjct: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSS 420

Query: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGYHLATGGEDNTCRIWDLRKKRSL 480
           CGLDALARVWDLRTGRSVLALEGHVKPVLGV+FSPNGYHLATGGEDNTCRIWDLRKK+SL
Sbjct: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSL 480

Query: 481 YIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540
           YIIPAHSNL+SQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS
Sbjct: 481 YIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540

Query: 541 DGQCIATVSHDRTIKLWSVNSKDEQTMDVD 570
           DGQCIATVSHDRTIKLWSVNSKDEQTMD+D
Sbjct: 541 DGQCIATVSHDRTIKLWSVNSKDEQTMDID 569

[Close]

BLAST of Csor.00g208470 vs. ExPASy TrEMBL
Match: A0A6J1G322 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Cucurbita moschata OX=3662 GN=LOC111450343 PE=4 SV=1)

HSP 1 Score: 1106 bits (2860), Expect = 0.0
Identity = 569/570 (99.82%), Postives = 570/570 (100.00%), Query Frame = 0


Query: 1   MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITR 60
           MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITR
Sbjct: 1   MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITR 60

Query: 61  PLAPLPSRPLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ 120
           PLAPLPSRPLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ
Sbjct: 61  PLAPLPSRPLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ 120

Query: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180
           EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE
Sbjct: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180

Query: 181 GQLEKLLKVHEEEEAAATGGTEEAEEEVLQYPFYTEGPKALLDARIDIAKYSIVRAASRL 240
           GQLEKLLKVHEEEEAAATGGTEEAEEEVLQYPFYTEGPKALLDARIDIAKYS+VRAASRL
Sbjct: 181 GQLEKLLKVHEEEEAAATGGTEEAEEEVLQYPFYTEGPKALLDARIDIAKYSVVRAASRL 240

Query: 241 ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300
           ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG
Sbjct: 241 ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300

Query: 301 VAKMWSMPQVRKVSNFNGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLRTFEGH 360
           VAKMWSMPQVRKVSNFNGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLRTFEGH
Sbjct: 301 VAKMWSMPQVRKVSNFNGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLRTFEGH 360

Query: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIDFHHDGSLVSS 420
           LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIDFHHDGSLVSS
Sbjct: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIDFHHDGSLVSS 420

Query: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGYHLATGGEDNTCRIWDLRKKRSL 480
           CGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGYHLATGGEDNTCRIWDLRKKRSL
Sbjct: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGYHLATGGEDNTCRIWDLRKKRSL 480

Query: 481 YIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540
           YIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS
Sbjct: 481 YIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540

Query: 541 DGQCIATVSHDRTIKLWSVNSKDEQTMDVD 570
           DGQCIATVSHDRTIKLWSVNSKDEQTMDVD
Sbjct: 541 DGQCIATVSHDRTIKLWSVNSKDEQTMDVD 570

[Close]

BLAST of Csor.00g208470 vs. ExPASy TrEMBL
Match: A0A6J1KDQ7 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Cucurbita maxima OX=3661 GN=LOC111493950 PE=4 SV=1)

HSP 1 Score: 1102 bits (2851), Expect = 0.0
Identity = 567/570 (99.47%), Postives = 569/570 (99.82%), Query Frame = 0


Query: 1   MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITR 60
           MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITR
Sbjct: 1   MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITR 60

Query: 61  PLAPLPSRPLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ 120
           PLAPLPSRPLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ
Sbjct: 61  PLAPLPSRPLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ 120

Query: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180
           EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE
Sbjct: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180

Query: 181 GQLEKLLKVHEEEEAAATGGTEEAEEEVLQYPFYTEGPKALLDARIDIAKYSIVRAASRL 240
           GQLEKLLKVHEEEEAAATGGTEEAEEEVLQYPFYTEGPKALLDARIDIAKYSIVRAASRL
Sbjct: 181 GQLEKLLKVHEEEEAAATGGTEEAEEEVLQYPFYTEGPKALLDARIDIAKYSIVRAASRL 240

Query: 241 ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300
           ERAKRKRDDPDEDVEAEMDWALRQAESL+LDCSEIGDDRPLSGCSFSSDGKFLATSSLSG
Sbjct: 241 ERAKRKRDDPDEDVEAEMDWALRQAESLILDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300

Query: 301 VAKMWSMPQVRKVSNFNGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLRTFEGH 360
           VAKMWSMPQVRKVSNF GHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLRTFEGH
Sbjct: 301 VAKMWSMPQVRKVSNFKGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLRTFEGH 360

Query: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIDFHHDGSLVSS 420
           LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIDFHHDGSLVSS
Sbjct: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIDFHHDGSLVSS 420

Query: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGYHLATGGEDNTCRIWDLRKKRSL 480
           CGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGYHLATGGEDNTCRIWDLRKK+SL
Sbjct: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGYHLATGGEDNTCRIWDLRKKKSL 480

Query: 481 YIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540
           YIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS
Sbjct: 481 YIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540

Query: 541 DGQCIATVSHDRTIKLWSVNSKDEQTMDVD 570
           DGQCIATVSHDRTIKLWSVNSKDEQTMDVD
Sbjct: 541 DGQCIATVSHDRTIKLWSVNSKDEQTMDVD 570

[Close]

BLAST of Csor.00g208470 vs. ExPASy TrEMBL
Match: A0A0A0KHD8 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G404170 PE=4 SV=1)

HSP 1 Score: 1050 bits (2714), Expect = 0.0
Identity = 537/570 (94.21%), Postives = 555/570 (97.37%), Query Frame = 0


Query: 1   MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITR 60
           M++DDQNPASTAAESPE LPGGENE+LDNPAEP QPAAT+VIP SIVP+IAPIPPP+I R
Sbjct: 1   MEIDDQNPASTAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPII-R 60

Query: 61  PLAPLPSRPLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ 120
           PLAPLPSRP LFRPPV QNGE+RTSDSDSEHDELAPSR   GSTAEYE+SEESRQ RER 
Sbjct: 61  PLAPLPSRPPLFRPPVTQNGELRTSDSDSEHDELAPSRTAPGSTAEYEISEESRQARERH 120

Query: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180
           EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE
Sbjct: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180

Query: 181 GQLEKLLKVHEEEEAAATGGTEEAEEEVLQYPFYTEGPKALLDARIDIAKYSIVRAASRL 240
           GQLEKL+KVHEEEEAAATGGTEEAEEEVLQYPFYTEG KALLDARIDIAKYSI+RA+SRL
Sbjct: 181 GQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRL 240

Query: 241 ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300
           ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG
Sbjct: 241 ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300

Query: 301 VAKMWSMPQVRKVSNFNGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLRTFEGH 360
           VAK+WSMPQVRKVSNF GHTERVTDV+FSPVNECLATASADRTARLWSAEGSLL+TFEGH
Sbjct: 301 VAKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSAEGSLLKTFEGH 360

Query: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIDFHHDGSLVSS 420
           LDRLARIAFHPSGKYLGTTSFDKTWRLWD+ETGVELLLQEGHSRSVYGI FHHDGSLVSS
Sbjct: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSS 420

Query: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGYHLATGGEDNTCRIWDLRKKRSL 480
           CGLDALARVWDLRTGRSVLALEGHVKPVLGV+FSPNGYHLATGGEDNTCRIWDLRKK+SL
Sbjct: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSL 480

Query: 481 YIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540
           YIIPAHSNL+SQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS
Sbjct: 481 YIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540

Query: 541 DGQCIATVSHDRTIKLWSVNSKDEQTMDVD 570
           DGQCIATVSHDRTIKLWSVNSKD QTMDVD
Sbjct: 541 DGQCIATVSHDRTIKLWSVNSKDIQTMDVD 569

[Close]

BLAST of Csor.00g208470 vs. ExPASy TrEMBL
Match: A0A1S4E4U8 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Cucumis melo OX=3656 GN=LOC103502534 PE=4 SV=1)

HSP 1 Score: 1045 bits (2701), Expect = 0.0
Identity = 533/570 (93.51%), Postives = 554/570 (97.19%), Query Frame = 0


Query: 1   MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITR 60
           M++DDQNPASTAAESPE LPGGENE+LDNPAEP QPAAT+VIP SIVP+IAPIPPP+I R
Sbjct: 1   MEIDDQNPASTAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPII-R 60

Query: 61  PLAPLPSRPLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ 120
           PLAPLPSRP LFRPPV QNGE+RTSDSDSEHDELAP+R   GSTAEYE+SEESRQ RER 
Sbjct: 61  PLAPLPSRPPLFRPPVTQNGELRTSDSDSEHDELAPARTAPGSTAEYEISEESRQARERH 120

Query: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180
           EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE
Sbjct: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180

Query: 181 GQLEKLLKVHEEEEAAATGGTEEAEEEVLQYPFYTEGPKALLDARIDIAKYSIVRAASRL 240
           GQLEKL+KVHEEEEAAATGGTEEAEEEVLQYPFYTEG KALLDARIDIAKYSI+RA+SRL
Sbjct: 181 GQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRL 240

Query: 241 ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300
           ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG
Sbjct: 241 ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300

Query: 301 VAKMWSMPQVRKVSNFNGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLRTFEGH 360
           VAK+WSMPQVRKVSNF GHTERVTDV+FSPVNECLATASADRTARLWS EGSLL+TFEGH
Sbjct: 301 VAKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSPEGSLLKTFEGH 360

Query: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIDFHHDGSLVSS 420
           LDRLARIAFHPSGKYLGTTSFDKTWRLWD+ETGVELLLQEGHSRSVYGI FH DGSLVSS
Sbjct: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHQDGSLVSS 420

Query: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGYHLATGGEDNTCRIWDLRKKRSL 480
           CGLDALARVWDLRTGRSVLALEGHVKPVLGV+FSPNGYHLATGGEDNTCRIWDLRKK+SL
Sbjct: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSL 480

Query: 481 YIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540
           YIIPAHSNL+SQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS
Sbjct: 481 YIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540

Query: 541 DGQCIATVSHDRTIKLWSVNSKDEQTMDVD 570
           DGQCIATVSHDRTIKLWSVNSKD+QTMD+D
Sbjct: 541 DGQCIATVSHDRTIKLWSVNSKDKQTMDID 569

[Close]

BLAST of Csor.00g208470 vs. ExPASy TrEMBL
Match: A0A6J1DAU7 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Momordica charantia OX=3673 GN=LOC111019283 PE=4 SV=1)

HSP 1 Score: 1027 bits (2655), Expect = 0.0
Identity = 526/571 (92.12%), Postives = 551/571 (96.50%), Query Frame = 0


Query: 1   MDVDDQNPASTAAESPEILPGGENE-DLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLIT 60
           M+VDDQNPAST+AESPE LP GEN  DLD+P+EP+QPAA++VIP  IVP+IAPIPPP + 
Sbjct: 1   MEVDDQNPASTSAESPETLPDGENVVDLDSPSEPIQPAASSVIPPPIVPAIAPIPPPPVI 60

Query: 61  RPLAPLPSRPLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRER 120
           RPLAPLPSRP LFRPPVAQNGE+RTSDSDSEHD+LAPSRA  GS A+YEVSEESRQVRER
Sbjct: 61  RPLAPLPSRPPLFRPPVAQNGELRTSDSDSEHDDLAPSRAAPGSAADYEVSEESRQVRER 120

Query: 121 QEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDA 180
           QEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDA
Sbjct: 121 QEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDA 180

Query: 181 EGQLEKLLKVHEEEEAAATGGTEEAEEEVLQYPFYTEGPKALLDARIDIAKYSIVRAASR 240
           EGQLEKLLK HEEEEAAAT GTE+AEEEVLQYPFYTEG KALL+ R+DIAKYSIVRAASR
Sbjct: 181 EGQLEKLLKAHEEEEAAATAGTEDAEEEVLQYPFYTEGSKALLNTRLDIAKYSIVRAASR 240

Query: 241 LERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLS 300
           LERAKRKRDDPDEDVEAEMDWALRQA SLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLS
Sbjct: 241 LERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLS 300

Query: 301 GVAKMWSMPQVRKVSNFNGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLRTFEG 360
           GVAK+WSMPQVRKVSNF GHTERVTDV+FSPVNECLATASADRTARLWSAEGSLLRTFEG
Sbjct: 301 GVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSAEGSLLRTFEG 360

Query: 361 HLDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIDFHHDGSLVS 420
           HLDRLARIAFHPSGKYLGTTSFDKTWRLWD+ETGVELLLQEGHSRSVYGI FHHDGSLVS
Sbjct: 361 HLDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVS 420

Query: 421 SCGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGYHLATGGEDNTCRIWDLRKKRS 480
           SCGLDALAR+WDLRTGRS+LALEGHVKPVLGV+FSPNGYHLATGGEDNTCRIWDLRKK+S
Sbjct: 421 SCGLDALARIWDLRTGRSILALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKS 480

Query: 481 LYIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDII 540
           LYIIPAHSNL+SQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDII
Sbjct: 481 LYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDII 540

Query: 541 SDGQCIATVSHDRTIKLWSVNSKDEQTMDVD 570
           +DGQ IATVSHDRTIKLWSVN+KDEQTMDVD
Sbjct: 541 ADGQGIATVSHDRTIKLWSVNNKDEQTMDVD 571

[Close]

BLAST of Csor.00g208470 vs. TAIR 10
Match: AT2G41500.1 (WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related )

HSP 1 Score: 713.8 bits (1841), Expect = 1.1e-205
Identity = 358/550 (65.09%), Postives = 434/550 (78.91%), Query Frame = 0


Query: 31  AEPMQPAATTVIPSSIVPSIAP--IPPPLITRPLAPLP--SRPLLFRPPVAQNGEMRTSD 90
           A P+   A+++   S +P + P   PPP+   P+ P P  +RP  FRPPV+QNG ++TSD
Sbjct: 19  APPVLQDASSLPGFSAIPPVVPPSFPPPMAPIPMMPHPPVARPPTFRPPVSQNGGVKTSD 78

Query: 91  SDSEHDELAPSRATQGSTAEYEVSEESRQVRERQEKAMQEFLMKRRASALAVPTNDMAVR 150
           SDSE D+              E+SEES+QVRERQEKA+Q+ L+KRRA+A+AVPTND AVR
Sbjct: 79  SDSESDD-----------EHIEISEESKQVRERQEKALQDLLVKRRAAAMAVPTNDKAVR 138

Query: 151 ARLRRLGEPITLFGEREMERRDRLRSIMARLDAEGQLEKLLKVHEEEEAAATGGTEEAEE 210
            RLRRLGEPITLFGE+EMERR RL  ++ R D  GQL+KL+K HEE+        EE ++
Sbjct: 139 DRLRRLGEPITLFGEQEMERRARLTQLLTRYDINGQLDKLVKDHEEDVTP----KEEVDD 198

Query: 211 EVLQYPFYTEGPKALLDARIDIAKYSIVRAASRLERAKRKRDDPDEDVEAEMDWALRQAE 270
           EVL+YPF+TEGPK L +ARI+IAK+S+ RAA R++RAKR+RDDPDED++AE  WAL+ A+
Sbjct: 199 EVLEYPFFTEGPKELREARIEIAKFSVKRAAVRIQRAKRRRDDPDEDMDAETKWALKHAK 258

Query: 271 SLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGVAKMWSMPQV-RKVSNFNGHTERVTD 330
            + LDCS  GDDRPL+GCSFS DGK LAT SLSGV K+W MPQV   ++    H ER TD
Sbjct: 259 HMALDCSNFGDDRPLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATD 318

Query: 331 VIFSPVNECLATASADRTARLWSAEGSLLRTFEGHLDRLARIAFHPSGKYLGTTSFDKTW 390
           V+FSPV++CLATASADRTA+LW  +G+LL+TFEGHLDRLAR+AFHPSGKYLGTTS+DKTW
Sbjct: 319 VVFSPVDDCLATASADRTAKLWKTDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTW 378

Query: 391 RLWDIETGVELLLQEGHSRSVYGIDFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHV 450
           RLWDI TG ELLLQEGHSRSVYGI F  DG+L +SCGLD+LARVWDLRTGRS+L  +GH+
Sbjct: 379 RLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHI 438

Query: 451 KPVLGVNFSPNGYHLATGGEDNTCRIWDLRKKRSLYIIPAHSNLISQVKYEPQEGYFLVT 510
           KPV  VNFSPNGYHLA+GGEDN CRIWDLR ++SLYIIPAH+NL+SQVKYEPQEGYFL T
Sbjct: 439 KPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLAT 498

Query: 511 ASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISDGQCIATVSHDRTIKLWSVNSKDE- 570
           AS+DM   IWS RDF  VK+L+GHE+KV SLDI +D  CIATVSHDRTIKLW+ +  D+ 
Sbjct: 499 ASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWTSSGNDDE 553

[Close]

BLAST of Csor.00g208470 vs. TAIR 10
Match: AT2G05720.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 313.2 bits (801), Expect = 4.4e-85
Identity = 166/327 (50.76%), Postives = 201/327 (61.47%), Query Frame = 0


Query: 217 GPKALLDARIDIAKYSIVRAASRLERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIG 276
           GP  L +ARI+I K  I RAA R++R  R+R+DPDED  AE   AL+  + +VL  S+ G
Sbjct: 2   GPTELREARIEITKDFIKRAALRIQRENRRRNDPDEDKNAETKLALKHCKDMVLGSSKFG 61

Query: 277 DDRPLSGCSFSSDGKFLATSSLSGVAKMWSMPQV-RKVSNFNGHTERVTDVIFSPV-NEC 336
           DDRPL+GCS S DGK L T SLSGV K+W +PQV  K+    GH E VTDV+FS V +EC
Sbjct: 62  DDRPLTGCSLSRDGKILVTCSLSGVPKLWEVPQVTNKIVVLKGHKEHVTDVVFSSVDDEC 121

Query: 337 LATASADRTARLWSAEGSLLRTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGV 396
           LATAS DRT ++W  +G+LL+TF+                                    
Sbjct: 122 LATASTDRTEKIWKTDGTLLQTFK------------------------------------ 181

Query: 397 ELLLQEGHSRSVYGIDFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVNFS 456
                                   +S G D+LARVWDLRT R++L  +GH+K VL V+FS
Sbjct: 182 ------------------------ASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFS 241

Query: 457 PNGYHLATGGEDNTCRIWDLRKKRSLYIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKI 516
           PNGYHLA+GGEDN CRIWDLR ++ LYIIPAH NL+SQVKYEPQE YFL TAS DM   I
Sbjct: 242 PNGYHLASGGEDNQCRIWDLRMRKLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNI 268

Query: 517 WSARDFKPVKTLSGHEAKVTSLDIISD 542
           WS RDF  VK+L GHE+KV SLDI  D
Sbjct: 302 WSGRDFSLVKSLVGHESKVASLDIAVD 268

[Close]

BLAST of Csor.00g208470 vs. TAIR 10
Match: AT3G49660.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 172.2 bits (435), Expect = 1.2e-42
Identity = 98/291 (33.68%), Postives = 148/291 (50.86%), Query Frame = 0


Query: 278 DRPLSGCSFSSDGKFLATSSLSGVAKMWSM-----PQVRKVSNFNGHTERVTDVIFSPVN 337
           +R +S   FSSDG+ LA++S     + +++     P    V  F GH   ++DV FS   
Sbjct: 24  NRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDA 83

Query: 338 ECLATASADRTARLWSAE-GSLLRTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIE 397
             + +AS D+T +LW  E GSL++T  GH +    + F+P    + + SFD+T R+WD+ 
Sbjct: 84  RFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVT 143

Query: 398 TGVELLLQEGHSRSVYGIDFHHDGSLVSSCGLDALARVWDLRTGRSVLAL-EGHVKPVLG 457
           TG  L +   HS  V  +DF+ DGSL+ S   D L R+WD  TG  V  L +    PV  
Sbjct: 144 TGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSF 203

Query: 458 VNFSPNGYHLATGGEDNTCRIWDLRKKRSLYIIPAHSN---LISQVKYEPQEGYFLVTAS 517
           V FSPNG  +  G  DNT R+W++   + L     H N    IS   +    G  +V+ S
Sbjct: 204 VRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSA-FSVTNGKRIVSGS 263

Query: 518 FDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISDGQCIATVSHDRTIKLWS 559
            D    +W     K ++ L GH   V ++        IA+ S D+T+++W+
Sbjct: 264 EDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIWT 313

[Close]

BLAST of Csor.00g208470 vs. TAIR 10
Match: AT4G02730.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 147.5 bits (371), Expect = 3.2e-35
Identity = 80/259 (30.89%), Postives = 139/259 (53.67%), Query Frame = 0


Query: 311 RKVSNFNGHTERVTDVIFSPVNECLATASADRTARLWSAEG-SLLRTFEGHLDRLARIAF 370
           R +    GHT  ++ V FS     LA+AS D+T  LWSA   SL+  +EGH   ++ +A+
Sbjct: 34  RHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAW 93

Query: 371 HPSGKYLGTTSFDKTWRLWDIETGVELL-LQEGHSRSVYGIDFHHDGSLVSSCGLDALAR 430
                Y  + S D T R+WD  +  E L +  GH+  V+ ++F+   +L+ S   D   R
Sbjct: 94  SSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIR 153

Query: 431 VWDLRTGRSVLALEGHVKPVLGVNFSPNGYHLATGGEDNTCRIWDLRKKRSL-YIIPAHS 490
           +W+++TG+ V  ++ H  P+  V+F+ +G  + +   D +C+IWD ++   L  +I   S
Sbjct: 154 IWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKS 213

Query: 491 NLISQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKV---TSLDIISDGQC 550
             +S  K+ P  G F++ A+ D T K+ +    K +K  +GH  KV   TS   +++G+ 
Sbjct: 214 PAVSFAKFSP-NGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKY 273

Query: 551 IATVSHDRTIKLWSVNSKD 564
           I + S D  + LW + +++
Sbjct: 274 IVSGSEDNCVYLWDLQARN 291

[Close]

BLAST of Csor.00g208470 vs. TAIR 10
Match: AT2G33340.1 (MOS4-associated complex 3B )

HSP 1 Score: 141.4 bits (355), Expect = 2.3e-33
Identity = 84/288 (29.17%), Postives = 145/288 (50.35%), Query Frame = 0


Query: 293 LATSSLSGVAKMWSMPQVRKVSNFNGHTERVTDVIFSPVNECLATASADRTARLWSAEG- 352
           +AT  +   A ++  P  + +S   GH+++VT V F   ++ + TASAD+T R+W   G 
Sbjct: 237 IATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGD 296

Query: 353 ---SLLRTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSV-- 412
              +   T   H   +  +  HP+ KY  + S D TW  +D+ +G  L      S++V  
Sbjct: 297 GNYACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDY 356

Query: 413 YGIDFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGYHLATGGED 472
               FH DG ++ +    ++ ++WD+++  +V   +GH   V  ++FS NGY LAT  ED
Sbjct: 357 TAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED 416

Query: 473 NTCRIWDLRKKRSL-YIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSAR-DFKPVK 532
              R+WDLRK R+    + A +N    V+++P   Y  + AS     +  S + ++  +K
Sbjct: 417 GV-RLWDLRKLRNFKSFLSADAN---SVEFDPSGSYLGIAASDIKVYQTASVKAEWNLIK 476

Query: 533 TLS--GHEAKVTSLDIISDGQCIATVSHDRTIKLWSVNSKDEQTMDVD 571
           TL       K T +   SD Q +A  S DR ++++ +   ++  +D D
Sbjct: 477 TLPDLSGTGKATCVKFGSDAQYVAVGSMDRNLRIFGLPGDEKANVDDD 520

The following BLAST results are available for this feature:

BLAST of Csor.00g208470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22212	1.6e-204	65.09	U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Arabidopsis thaliana ...	[more]
Q3MHE2	7.3e-117	47.28	U4/U6 small nuclear ribonucleoprotein Prp4 OS=Bos taurus OX=9913 GN=PRPF4 PE=2 S...	[more]
O43172	7.3e-117	47.28	U4/U6 small nuclear ribonucleoprotein Prp4 OS=Homo sapiens OX=9606 GN=PRPF4 PE=1...	[more]
Q5NVD0	7.3e-117	47.28	U4/U6 small nuclear ribonucleoprotein Prp4 OS=Pongo abelii OX=9601 GN=PRPF4 PE=2...	[more]
Q9DAW6	1.3e-116	47.28	U4/U6 small nuclear ribonucleoprotein Prp4 OS=Mus musculus OX=10090 GN=Prpf4 PE=...	[more]

BLAST of Csor.00g208470 vs. NCBI nr


Match Name	Identity	Description
KAG6599065.1	100.00	U4/U6 small nuclear ribonucleoprotein PRP4-like protein, partial [Cucurbita argy...	[more]
XP_022946187.1	99.82	U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucurbita moschata]	[more]
XP_022999661.1	99.47	U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucurbita maxima]	[more]
XP_023525233.1	99.47	U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucurbita pepo subsp. p...	[more]
XP_038885479.1	95.26	U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Benincasa hispida] >XP_...	[more]

BLAST of Csor.00g208470 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1G322	99.82	U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Cucurbita moschata OX...	[more]
A0A6J1KDQ7	99.47	U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Cucurbita maxima OX=3...	[more]
A0A0A0KHD8	94.21	WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G...	[more]
A0A1S4E4U8	93.51	U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Cucumis melo OX=3656 ...	[more]
A0A6J1DAU7	92.12	U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Momordica charantia O...	[more]

BLAST of Csor.00g208470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41500.1	1.1e-205	65.09	WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related	[more]
AT2G05720.1	4.4e-85	50.76	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G49660.1	1.2e-42	33.68	Transducin/WD40 repeat-like superfamily protein	[more]
AT4G02730.1	3.2e-35	30.89	Transducin/WD40 repeat-like superfamily protein	[more]
AT2G33340.1	2.3e-33	29.17	MOS4-associated complex 3B	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 460..474 score: 40.13 coord: 335..349 score: 36.13 coord: 545..559 score: 31.77
IPR014906	Pre-mRNA processing factor 4 (PRP4)-like	SMART	SM00500	pr04_2	coord: 140..193 e-value: 1.1E-17 score: 74.7
IPR014906	Pre-mRNA processing factor 4 (PRP4)-like	PFAM	PF08799	PRP4	coord: 145..172 e-value: 1.1E-12 score: 47.2
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 476..516 e-value: 5.2E-4 score: 29.3 coord: 519..558 e-value: 3.0E-10 score: 50.1 coord: 392..431 e-value: 4.2E-6 score: 36.3 coord: 265..306 e-value: 0.042 score: 23.0 coord: 434..473 e-value: 1.7E-10 score: 50.9 coord: 350..389 e-value: 7.9E-8 score: 42.0 coord: 309..348 e-value: 3.0E-8 score: 43.4
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 521..558 e-value: 1.6E-6 score: 28.7 coord: 351..389 e-value: 7.9E-5 score: 23.4 coord: 438..473 e-value: 1.3E-8 score: 35.3 coord: 400..431 e-value: 7.0E-4 score: 20.4 coord: 313..348 e-value: 8.2E-5 score: 23.3
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 441..482 score: 16.724236
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 399..440 score: 13.983944
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 357..398 score: 13.516088
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 526..567 score: 14.217871
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 483..525 score: 11.711506
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 316..348 score: 13.348998
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 258..441 e-value: 3.2E-48 score: 166.2
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 442..569 e-value: 9.1E-40 score: 138.6
IPR036285	PRP4-like superfamily	GENE3D	4.10.280.110		coord: 109..185 e-value: 7.5E-15 score: 56.2
IPR036285	PRP4-like superfamily	SUPERFAMILY	158230	PRP4-like	coord: 122..178
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..71
None	No IPR available	PANTHER	PTHR19846:SF3	BNAC04G01920D PROTEIN	coord: 105..564
None	No IPR available	PANTHER	PTHR19846	WD40 REPEAT PROTEIN	coord: 105..564
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 526..561 score: 11.286501
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 441..475 score: 13.079218
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 357..393 score: 10.943775
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 316..348 score: 11.075592
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 399..436 score: 10.706503
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 483..516 score: 9.019239
None	No IPR available	CDD	cd00200	WD40	coord: 280..558 e-value: 2.194E-89 score: 275.753
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 418..432
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 460..474
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 376..390
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 274..557

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g208470.m01	Csor.00g208470.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0046540	U4/U6 x U5 tri-snRNP complex
molecular_function	GO:0005515	protein binding
molecular_function	GO:0030621	U4 snRNA binding
molecular_function	GO:0017070	U6 snRNA binding