Csor.00g208220 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g208220
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	stress-induced protein KIN2-like
Location	Csor_Chr05: 7522093 .. 7522389 (-)
RNA-Seq Expression	Csor.00g208220
Synteny	Csor.00g208220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGACAGCTCTCAAAGTTTGAGCTACCAAGTTGGAGAAGCCAAAGGCCAAGCACAGGTTCACCATGTCATTATTATTTGTTTAAATGGCTCATGATAAATATGAGTACATGGAGTGATGGGTAATATAGTTATTAACGTGATTATGTAGGAGAAGGCGAGTAATCTGATGGATAGGGCAAGTGGTGCAGCCCAATCAACTAAGGAGTCATTACAAGAGGCAGGACAACAGATACAAGCTAAAACGCAAGGTGCAGTTGATGCGGTCAAAGATGCTAGTGGCATGAAGAAATGA

mRNA sequence

ATGGCAGACAGCTCTCAAAGTTTGAGCTACCAAGTTGGAGAAGCCAAAGGCCAAGCACAGGAGAAGGCGAGTAATCTGATGGATAGGGCAAGTGGTGCAGCCCAATCAACTAAGGAGTCATTACAAGAGGCAGGACAACAGATACAAGCTAAAACGCAAGGTGCAGTTGATGCGGTCAAAGATGCTAGTGGCATGAAGAAATGA

Coding sequence (CDS)

ATGGCAGACAGCTCTCAAAGTTTGAGCTACCAAGTTGGAGAAGCCAAAGGCCAAGCACAGGAGAAGGCGAGTAATCTGATGGATAGGGCAAGTGGTGCAGCCCAATCAACTAAGGAGTCATTACAAGAGGCAGGACAACAGATACAAGCTAAAACGCAAGGTGCAGTTGATGCGGTCAAAGATGCTAGTGGCATGAAGAAATGA

Protein sequence

MADSSQSLSYQVGEAKGQAQEKASNLMDRASGAAQSTKESLQEAGQQIQAKTQGAVDAVKDASGMKK

Homology

[Close]

BLAST of Csor.00g208220 vs. NCBI nr
Match: XP_022946603.1 (stress-induced protein KIN2-like [Cucurbita moschata] >KAG6599041.1 hypothetical protein SDJN03_08819, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 115 bits (287), Expect = 7.25e-32
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0


Query: 1  MADSSQSLSYQVGEAKGQAQEKASNLMDRASGAAQSTKESLQEAGQQIQAKTQGAVDAVK 60
          MADSSQSLSYQVGEAKGQAQEKASNLMDRASGAAQSTKESLQEAGQQIQAKTQGAVDAVK
Sbjct: 1  MADSSQSLSYQVGEAKGQAQEKASNLMDRASGAAQSTKESLQEAGQQIQAKTQGAVDAVK 60

Query: 61 DASGMKK 67
          DASGMKK
Sbjct: 61 DASGMKK 67

[Close]

BLAST of Csor.00g208220 vs. NCBI nr
Match: XP_023547236.1 (stress-induced protein KIN2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 108 bits (269), Expect = 4.05e-29
Identity = 63/67 (94.03%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 1  MADSSQSLSYQVGEAKGQAQEKASNLMDRASGAAQSTKESLQEAGQQIQAKTQGAVDAVK 60
          MADSSQSLSYQVGEAKGQAQEKASN+MDRAS AAQSTKESLQEAGQQ+QAK QGAVDAVK
Sbjct: 1  MADSSQSLSYQVGEAKGQAQEKASNVMDRASDAAQSTKESLQEAGQQMQAKAQGAVDAVK 60

Query: 61 DASGMKK 67
          DASGMKK
Sbjct: 61 DASGMKK 67

[Close]

BLAST of Csor.00g208220 vs. NCBI nr
Match: XP_022946705.1 (stress-induced protein KIN2-like [Cucurbita moschata] >KAG6599040.1 hypothetical protein SDJN03_08818, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 102 bits (255), Expect = 5.54e-27
Identity = 61/67 (91.04%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1  MADSSQSLSYQVGEAKGQAQEKASNLMDRASGAAQSTKESLQEAGQQIQAKTQGAVDAVK 60
          MADSSQSLS QVGEAKGQ QEKASNLMDRAS AAQSTKESLQEAGQQ+QAK QGAVDAVK
Sbjct: 1  MADSSQSLSNQVGEAKGQTQEKASNLMDRASEAAQSTKESLQEAGQQMQAKAQGAVDAVK 60

Query: 61 DASGMKK 67
          DA+GMKK
Sbjct: 61 DATGMKK 67

[Close]

BLAST of Csor.00g208220 vs. NCBI nr
Match: XP_022999380.1 (stress-induced protein KIN2-like [Cucurbita maxima])

HSP 1 Score: 101 bits (252), Expect = 1.59e-26
Identity = 59/67 (88.06%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1  MADSSQSLSYQVGEAKGQAQEKASNLMDRASGAAQSTKESLQEAGQQIQAKTQGAVDAVK 60
          MA SSQSLSYQ+GEAKGQAQEKASNLMD+AS AAQSTKES+QEAGQQIQAK QGAVDAVK
Sbjct: 1  MAGSSQSLSYQIGEAKGQAQEKASNLMDKASDAAQSTKESIQEAGQQIQAKAQGAVDAVK 60

Query: 61 DASGMKK 67
          DA+ MKK
Sbjct: 61 DATDMKK 67

[Close]

BLAST of Csor.00g208220 vs. NCBI nr
Match: XP_022946698.1 (stress-induced protein KIN2-like [Cucurbita moschata] >XP_022946702.1 stress-induced protein KIN2-like [Cucurbita moschata] >XP_022999366.1 stress-induced protein KIN2-like [Cucurbita maxima] >KAG6599037.1 hypothetical protein SDJN03_08815, partial [Cucurbita argyrosperma subsp. sororia] >KAG6599038.1 hypothetical protein SDJN03_08816, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 100 bits (250), Expect = 3.21e-26
Identity = 58/67 (86.57%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1  MADSSQSLSYQVGEAKGQAQEKASNLMDRASGAAQSTKESLQEAGQQIQAKTQGAVDAVK 60
          MADSSQSLSYQ+GEAKGQAQEKASNLMD+AS AAQSTKES+QEAGQQ+QAK QGAVDAVK
Sbjct: 1  MADSSQSLSYQIGEAKGQAQEKASNLMDKASDAAQSTKESIQEAGQQMQAKAQGAVDAVK 60

Query: 61 DASGMKK 67
          DA+  KK
Sbjct: 61 DATDTKK 67

[Close]

BLAST of Csor.00g208220 vs. ExPASy TrEMBL
Match: A0A6J1G4B8 (stress-induced protein KIN2-like OS=Cucurbita moschata OX=3662 GN=LOC111450620 PE=4 SV=1)

HSP 1 Score: 115 bits (287), Expect = 3.51e-32
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0


Query: 1  MADSSQSLSYQVGEAKGQAQEKASNLMDRASGAAQSTKESLQEAGQQIQAKTQGAVDAVK 60
          MADSSQSLSYQVGEAKGQAQEKASNLMDRASGAAQSTKESLQEAGQQIQAKTQGAVDAVK
Sbjct: 1  MADSSQSLSYQVGEAKGQAQEKASNLMDRASGAAQSTKESLQEAGQQIQAKTQGAVDAVK 60

Query: 61 DASGMKK 67
          DASGMKK
Sbjct: 61 DASGMKK 67

[Close]

BLAST of Csor.00g208220 vs. ExPASy TrEMBL
Match: A0A6J1G4P7 (stress-induced protein KIN2-like OS=Cucurbita moschata OX=3662 GN=LOC111450698 PE=4 SV=1)

HSP 1 Score: 102 bits (255), Expect = 2.68e-27
Identity = 61/67 (91.04%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1  MADSSQSLSYQVGEAKGQAQEKASNLMDRASGAAQSTKESLQEAGQQIQAKTQGAVDAVK 60
          MADSSQSLS QVGEAKGQ QEKASNLMDRAS AAQSTKESLQEAGQQ+QAK QGAVDAVK
Sbjct: 1  MADSSQSLSNQVGEAKGQTQEKASNLMDRASEAAQSTKESLQEAGQQMQAKAQGAVDAVK 60

Query: 61 DASGMKK 67
          DA+GMKK
Sbjct: 61 DATGMKK 67

[Close]

BLAST of Csor.00g208220 vs. ExPASy TrEMBL
Match: A0A6J1KF81 (stress-induced protein KIN2-like OS=Cucurbita maxima OX=3661 GN=LOC111493769 PE=4 SV=1)

HSP 1 Score: 101 bits (252), Expect = 7.70e-27
Identity = 59/67 (88.06%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1  MADSSQSLSYQVGEAKGQAQEKASNLMDRASGAAQSTKESLQEAGQQIQAKTQGAVDAVK 60
          MA SSQSLSYQ+GEAKGQAQEKASNLMD+AS AAQSTKES+QEAGQQIQAK QGAVDAVK
Sbjct: 1  MAGSSQSLSYQIGEAKGQAQEKASNLMDKASDAAQSTKESIQEAGQQIQAKAQGAVDAVK 60

Query: 61 DASGMKK 67
          DA+ MKK
Sbjct: 61 DATDMKK 67

[Close]

BLAST of Csor.00g208220 vs. ExPASy TrEMBL
Match: A0A6J1G4K0 (stress-induced protein KIN2-like OS=Cucurbita moschata OX=3662 GN=LOC111450690 PE=4 SV=1)

HSP 1 Score: 100 bits (250), Expect = 1.55e-26
Identity = 58/67 (86.57%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1  MADSSQSLSYQVGEAKGQAQEKASNLMDRASGAAQSTKESLQEAGQQIQAKTQGAVDAVK 60
          MADSSQSLSYQ+GEAKGQAQEKASNLMD+AS AAQSTKES+QEAGQQ+QAK QGAVDAVK
Sbjct: 1  MADSSQSLSYQIGEAKGQAQEKASNLMDKASDAAQSTKESIQEAGQQMQAKAQGAVDAVK 60

Query: 61 DASGMKK 67
          DA+  KK
Sbjct: 61 DATDTKK 67

[Close]

BLAST of Csor.00g208220 vs. ExPASy TrEMBL
Match: A0A6J1KCV0 (stress-induced protein KIN2-like OS=Cucurbita maxima OX=3661 GN=LOC111493760 PE=4 SV=1)

HSP 1 Score: 100 bits (250), Expect = 1.55e-26
Identity = 58/67 (86.57%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1  MADSSQSLSYQVGEAKGQAQEKASNLMDRASGAAQSTKESLQEAGQQIQAKTQGAVDAVK 60
          MADSSQSLSYQ+GEAKGQAQEKASNLMD+AS AAQSTKES+QEAGQQ+QAK QGAVDAVK
Sbjct: 1  MADSSQSLSYQIGEAKGQAQEKASNLMDKASDAAQSTKESIQEAGQQMQAKAQGAVDAVK 60

Query: 61 DASGMKK 67
          DA+  KK
Sbjct: 61 DATDTKK 67

[Close]

BLAST of Csor.00g208220 vs. TAIR 10
Match: AT5G38760.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 79.3 bits (194), Expect = 1.3e-15
Identity = 42/67 (62.69%), Postives = 56/67 (83.58%), Query Frame = 0


Query: 1  MADSSQSLSYQVGEAKGQAQEKASNLMDRASGAAQSTKESLQEAGQQIQAKTQGAVDAVK 60
          M+ +SQ++S+Q G+AKGQ QEKAS +MD+AS AAQS KESL+E GQQI+ K QGA ++VK
Sbjct: 1  MSSNSQNISFQAGQAKGQTQEKASTMMDKASNAAQSAKESLKETGQQIKEKAQGATESVK 60

Query: 61 DASGMKK 68
          +A+GM K
Sbjct: 61 NATGMNK 67

[Close]

BLAST of Csor.00g208220 vs. TAIR 10
Match: AT5G53820.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 75.9 bits (185), Expect = 1.4e-14
Identity = 39/67 (58.21%), Postives = 55/67 (82.09%), Query Frame = 0


Query: 1  MADSSQSLSYQVGEAKGQAQEKASNLMDRASGAAQSTKESLQEAGQQIQAKTQGAVDAVK 60
          M+++SQS+S+  G+AKGQ QEKASNL+D+AS AAQS KES+QE GQQ++ K QGA + +K
Sbjct: 1  MSNNSQSMSFNAGQAKGQTQEKASNLIDKASNAAQSAKESIQEGGQQLKQKAQGASETIK 60

Query: 61 DASGMKK 68
          + +G+ K
Sbjct: 61 EKTGISK 67

[Close]

BLAST of Csor.00g208220 vs. TAIR 10
Match: AT3G02480.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 66.2 bits (160), Expect = 1.1e-11
Identity = 35/65 (53.85%), Postives = 47/65 (72.31%), Query Frame = 0


Query: 3  DSSQSLSYQVGEAKGQAQEKASNLMDRASGAAQSTKESLQEAGQQIQAKTQGAVDAVKDA 62
          D+ Q+ SYQ G+A GQ +EKA  +MD+A  AA S ++SLQ+ GQQ++ K QGA D VKD 
Sbjct: 2  DNKQNASYQAGQATGQTKEKAGGMMDKAKDAAASAQDSLQQTGQQMKEKAQGAADVVKDK 61

Query: 63 SGMKK 68
          +GM K
Sbjct: 62 TGMNK 66

[Close]

BLAST of Csor.00g208220 vs. TAIR 10
Match: AT5G15970.1 (stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsive protein (COR6.6) / cold-regulated protein (COR6.6) )

HSP 1 Score: 42.4 bits (98), Expect = 1.7e-04
Identity = 24/59 (40.68%), Postives = 39/59 (66.10%), Query Frame = 0


Query: 9  SYQVGEAKGQAQEKASNLMDRASGAAQSTKESLQEAGQQIQAKTQGAVDAVKDASGMKK 68
          ++Q G+A G+A+EK++ L+D+A  AA +   S Q+AG+ I     G V+ VKD +G+ K
Sbjct: 8  AFQAGQAAGKAEEKSNVLLDKAKDAAAAAGASAQQAGKSISDAAVGGVNFVKDKTGLNK 66

The following BLAST results are available for this feature:

BLAST of Csor.00g208220 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g208220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946603.1	7.25e-32	100.00	stress-induced protein KIN2-like [Cucurbita moschata] >KAG6599041.1 hypothetical...	[more]
XP_023547236.1	4.05e-29	94.03	stress-induced protein KIN2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022946705.1	5.54e-27	91.04	stress-induced protein KIN2-like [Cucurbita moschata] >KAG6599040.1 hypothetical...	[more]
XP_022999380.1	1.59e-26	88.06	stress-induced protein KIN2-like [Cucurbita maxima]	[more]
XP_022946698.1	3.21e-26	86.57	stress-induced protein KIN2-like [Cucurbita moschata] >XP_022946702.1 stress-ind...	[more]

BLAST of Csor.00g208220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G4B8	3.51e-32	100.00	stress-induced protein KIN2-like OS=Cucurbita moschata OX=3662 GN=LOC111450620 P...	[more]
A0A6J1G4P7	2.68e-27	91.04	stress-induced protein KIN2-like OS=Cucurbita moschata OX=3662 GN=LOC111450698 P...	[more]
A0A6J1KF81	7.70e-27	88.06	stress-induced protein KIN2-like OS=Cucurbita maxima OX=3661 GN=LOC111493769 PE=...	[more]
A0A6J1G4K0	1.55e-26	86.57	stress-induced protein KIN2-like OS=Cucurbita moschata OX=3662 GN=LOC111450690 P...	[more]
A0A6J1KCV0	1.55e-26	86.57	stress-induced protein KIN2-like OS=Cucurbita maxima OX=3661 GN=LOC111493760 PE=...	[more]

BLAST of Csor.00g208220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38760.1	1.3e-15	62.69	Late embryogenesis abundant protein (LEA) family protein	[more]
AT5G53820.1	1.4e-14	58.21	Late embryogenesis abundant protein (LEA) family protein	[more]
AT3G02480.1	1.1e-11	53.85	Late embryogenesis abundant protein (LEA) family protein	[more]
AT5G15970.1	1.7e-04	40.68	stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsi...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	6.10.140.1430		coord: 3..67 e-value: 5.9E-5 score: 25.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..67
None	No IPR available	PANTHER	PTHR34191:SF23	STRESS-INDUCED PROTEIN KIN1-RELATED	coord: 1..67
IPR039624	Stress-induced protein KIN1/KIN2	PANTHER	PTHR34191	LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEIN	coord: 1..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g208220.m01	Csor.00g208220.m01	mRNA