Csor.00g208210 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g208210
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	stress-induced protein KIN2-like
Location	Csor_Chr05: 7520409 .. 7520704 (+)
RNA-Seq Expression	Csor.00g208210
Synteny	Csor.00g208210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGACAGCTCTCAAAGTTTGAGCAACCAAGTTGGAGAAGCCAAGGGCCAAACACAGGTTCACTGTGCCACTATTCTTTTATAAATGGTTCATGCTAAATATGACTATATGGAGTGATGGGTAATATAGTTATTAATGTGATTATGTAGGAGAAGGCGAGTAATCTGATGGATAGGGCAAGTGAGGCAGCCCAATCAACTAAGGAGTCATTACAAGAGGCAGGACAACAGATGCAGGCTAAAGCACAAGGTGCAGTTGATGCGGTCAAAGATGCCACTGGCATGAAAAAATGA

mRNA sequence

ATGGCAGACAGCTCTCAAAGTTTGAGCAACCAAGTTGGAGAAGCCAAGGGCCAAACACAGGAGAAGGCGAGTAATCTGATGGATAGGGCAAGTGAGGCAGCCCAATCAACTAAGGAGTCATTACAAGAGGCAGGACAACAGATGCAGGCTAAAGCACAAGGTGCAGTTGATGCGGTCAAAGATGCCACTGGCATGAAAAAATGA

Coding sequence (CDS)

ATGGCAGACAGCTCTCAAAGTTTGAGCAACCAAGTTGGAGAAGCCAAGGGCCAAACACAGGAGAAGGCGAGTAATCTGATGGATAGGGCAAGTGAGGCAGCCCAATCAACTAAGGAGTCATTACAAGAGGCAGGACAACAGATGCAGGCTAAAGCACAAGGTGCAGTTGATGCGGTCAAAGATGCCACTGGCATGAAAAAATGA

Protein sequence

MADSSQSLSNQVGEAKGQTQEKASNLMDRASEAAQSTKESLQEAGQQMQAKAQGAVDAVKDATGMKK

Homology

[Close]

BLAST of Csor.00g208210 vs. NCBI nr
Match: XP_022946705.1 (stress-induced protein KIN2-like [Cucurbita moschata] >KAG6599040.1 hypothetical protein SDJN03_08818, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 113 bits (282), Expect = 4.20e-31
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0


Query: 1  MADSSQSLSNQVGEAKGQTQEKASNLMDRASEAAQSTKESLQEAGQQMQAKAQGAVDAVK 60
          MADSSQSLSNQVGEAKGQTQEKASNLMDRASEAAQSTKESLQEAGQQMQAKAQGAVDAVK
Sbjct: 1  MADSSQSLSNQVGEAKGQTQEKASNLMDRASEAAQSTKESLQEAGQQMQAKAQGAVDAVK 60

Query: 61 DATGMKK 67
          DATGMKK
Sbjct: 61 DATGMKK 67

[Close]

BLAST of Csor.00g208210 vs. NCBI nr
Match: XP_023547236.1 (stress-induced protein KIN2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 104 bits (259), Expect = 1.36e-27
Identity = 62/67 (92.54%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 1  MADSSQSLSNQVGEAKGQTQEKASNLMDRASEAAQSTKESLQEAGQQMQAKAQGAVDAVK 60
          MADSSQSLS QVGEAKGQ QEKASN+MDRAS+AAQSTKESLQEAGQQMQAKAQGAVDAVK
Sbjct: 1  MADSSQSLSYQVGEAKGQAQEKASNVMDRASDAAQSTKESLQEAGQQMQAKAQGAVDAVK 60

Query: 61 DATGMKK 67
          DA+GMKK
Sbjct: 61 DASGMKK 67

[Close]

BLAST of Csor.00g208210 vs. NCBI nr
Match: XP_022946603.1 (stress-induced protein KIN2-like [Cucurbita moschata] >KAG6599041.1 hypothetical protein SDJN03_08819, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 100 bits (250), Expect = 3.21e-26
Identity = 61/67 (91.04%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1  MADSSQSLSNQVGEAKGQTQEKASNLMDRASEAAQSTKESLQEAGQQMQAKAQGAVDAVK 60
          MADSSQSLS QVGEAKGQ QEKASNLMDRAS AAQSTKESLQEAGQQ+QAK QGAVDAVK
Sbjct: 1  MADSSQSLSYQVGEAKGQAQEKASNLMDRASGAAQSTKESLQEAGQQIQAKTQGAVDAVK 60

Query: 61 DATGMKK 67
          DA+GMKK
Sbjct: 61 DASGMKK 67

[Close]

BLAST of Csor.00g208210 vs. NCBI nr
Match: XP_022946698.1 (stress-induced protein KIN2-like [Cucurbita moschata] >XP_022946702.1 stress-induced protein KIN2-like [Cucurbita moschata] >XP_022999366.1 stress-induced protein KIN2-like [Cucurbita maxima] >KAG6599037.1 hypothetical protein SDJN03_08815, partial [Cucurbita argyrosperma subsp. sororia] >KAG6599038.1 hypothetical protein SDJN03_08816, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 99.8 bits (247), Expect = 9.21e-26
Identity = 59/67 (88.06%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1  MADSSQSLSNQVGEAKGQTQEKASNLMDRASEAAQSTKESLQEAGQQMQAKAQGAVDAVK 60
          MADSSQSLS Q+GEAKGQ QEKASNLMD+AS+AAQSTKES+QEAGQQMQAKAQGAVDAVK
Sbjct: 1  MADSSQSLSYQIGEAKGQAQEKASNLMDKASDAAQSTKESIQEAGQQMQAKAQGAVDAVK 60

Query: 61 DATGMKK 67
          DAT  KK
Sbjct: 61 DATDTKK 67

[Close]

BLAST of Csor.00g208210 vs. NCBI nr
Match: XP_022999380.1 (stress-induced protein KIN2-like [Cucurbita maxima])

HSP 1 Score: 97.8 bits (242), Expect = 5.34e-25
Identity = 58/67 (86.57%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1  MADSSQSLSNQVGEAKGQTQEKASNLMDRASEAAQSTKESLQEAGQQMQAKAQGAVDAVK 60
          MA SSQSLS Q+GEAKGQ QEKASNLMD+AS+AAQSTKES+QEAGQQ+QAKAQGAVDAVK
Sbjct: 1  MAGSSQSLSYQIGEAKGQAQEKASNLMDKASDAAQSTKESIQEAGQQIQAKAQGAVDAVK 60

Query: 61 DATGMKK 67
          DAT MKK
Sbjct: 61 DATDMKK 67

[Close]

BLAST of Csor.00g208210 vs. ExPASy TrEMBL
Match: A0A6J1G4P7 (stress-induced protein KIN2-like OS=Cucurbita moschata OX=3662 GN=LOC111450698 PE=4 SV=1)

HSP 1 Score: 113 bits (282), Expect = 2.03e-31
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0


Query: 1  MADSSQSLSNQVGEAKGQTQEKASNLMDRASEAAQSTKESLQEAGQQMQAKAQGAVDAVK 60
          MADSSQSLSNQVGEAKGQTQEKASNLMDRASEAAQSTKESLQEAGQQMQAKAQGAVDAVK
Sbjct: 1  MADSSQSLSNQVGEAKGQTQEKASNLMDRASEAAQSTKESLQEAGQQMQAKAQGAVDAVK 60

Query: 61 DATGMKK 67
          DATGMKK
Sbjct: 61 DATGMKK 67

[Close]

BLAST of Csor.00g208210 vs. ExPASy TrEMBL
Match: A0A6J1G4B8 (stress-induced protein KIN2-like OS=Cucurbita moschata OX=3662 GN=LOC111450620 PE=4 SV=1)

HSP 1 Score: 100 bits (250), Expect = 1.55e-26
Identity = 61/67 (91.04%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1  MADSSQSLSNQVGEAKGQTQEKASNLMDRASEAAQSTKESLQEAGQQMQAKAQGAVDAVK 60
          MADSSQSLS QVGEAKGQ QEKASNLMDRAS AAQSTKESLQEAGQQ+QAK QGAVDAVK
Sbjct: 1  MADSSQSLSYQVGEAKGQAQEKASNLMDRASGAAQSTKESLQEAGQQIQAKTQGAVDAVK 60

Query: 61 DATGMKK 67
          DA+GMKK
Sbjct: 61 DASGMKK 67

[Close]

BLAST of Csor.00g208210 vs. ExPASy TrEMBL
Match: A0A6J1G4K0 (stress-induced protein KIN2-like OS=Cucurbita moschata OX=3662 GN=LOC111450690 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.46e-26
Identity = 59/67 (88.06%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1  MADSSQSLSNQVGEAKGQTQEKASNLMDRASEAAQSTKESLQEAGQQMQAKAQGAVDAVK 60
          MADSSQSLS Q+GEAKGQ QEKASNLMD+AS+AAQSTKES+QEAGQQMQAKAQGAVDAVK
Sbjct: 1  MADSSQSLSYQIGEAKGQAQEKASNLMDKASDAAQSTKESIQEAGQQMQAKAQGAVDAVK 60

Query: 61 DATGMKK 67
          DAT  KK
Sbjct: 61 DATDTKK 67

[Close]

BLAST of Csor.00g208210 vs. ExPASy TrEMBL
Match: A0A6J1KCV0 (stress-induced protein KIN2-like OS=Cucurbita maxima OX=3661 GN=LOC111493760 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.46e-26
Identity = 59/67 (88.06%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1  MADSSQSLSNQVGEAKGQTQEKASNLMDRASEAAQSTKESLQEAGQQMQAKAQGAVDAVK 60
          MADSSQSLS Q+GEAKGQ QEKASNLMD+AS+AAQSTKES+QEAGQQMQAKAQGAVDAVK
Sbjct: 1  MADSSQSLSYQIGEAKGQAQEKASNLMDKASDAAQSTKESIQEAGQQMQAKAQGAVDAVK 60

Query: 61 DATGMKK 67
          DAT  KK
Sbjct: 61 DATDTKK 67

[Close]

BLAST of Csor.00g208210 vs. ExPASy TrEMBL
Match: A0A6J1KF81 (stress-induced protein KIN2-like OS=Cucurbita maxima OX=3661 GN=LOC111493769 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.58e-25
Identity = 58/67 (86.57%), Postives = 63/67 (94.03%), Query Frame = 0


Query: 1  MADSSQSLSNQVGEAKGQTQEKASNLMDRASEAAQSTKESLQEAGQQMQAKAQGAVDAVK 60
          MA SSQSLS Q+GEAKGQ QEKASNLMD+AS+AAQSTKES+QEAGQQ+QAKAQGAVDAVK
Sbjct: 1  MAGSSQSLSYQIGEAKGQAQEKASNLMDKASDAAQSTKESIQEAGQQIQAKAQGAVDAVK 60

Query: 61 DATGMKK 67
          DAT MKK
Sbjct: 61 DATDMKK 67

[Close]

BLAST of Csor.00g208210 vs. TAIR 10
Match: AT5G38760.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 79.0 bits (193), Expect = 1.7e-15
Identity = 44/67 (65.67%), Postives = 57/67 (85.07%), Query Frame = 0


Query: 1  MADSSQSLSNQVGEAKGQTQEKASNLMDRASEAAQSTKESLQEAGQQMQAKAQGAVDAVK 60
          M+ +SQ++S Q G+AKGQTQEKAS +MD+AS AAQS KESL+E GQQ++ KAQGA ++VK
Sbjct: 1  MSSNSQNISFQAGQAKGQTQEKASTMMDKASNAAQSAKESLKETGQQIKEKAQGATESVK 60

Query: 61 DATGMKK 68
          +ATGM K
Sbjct: 61 NATGMNK 67

[Close]

BLAST of Csor.00g208210 vs. TAIR 10
Match: AT5G53820.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 76.6 bits (187), Expect = 8.2e-15
Identity = 42/67 (62.69%), Postives = 56/67 (83.58%), Query Frame = 0


Query: 1  MADSSQSLSNQVGEAKGQTQEKASNLMDRASEAAQSTKESLQEAGQQMQAKAQGAVDAVK 60
          M+++SQS+S   G+AKGQTQEKASNL+D+AS AAQS KES+QE GQQ++ KAQGA + +K
Sbjct: 1  MSNNSQSMSFNAGQAKGQTQEKASNLIDKASNAAQSAKESIQEGGQQLKQKAQGASETIK 60

Query: 61 DATGMKK 68
          + TG+ K
Sbjct: 61 EKTGISK 67

[Close]

BLAST of Csor.00g208210 vs. TAIR 10
Match: AT3G02480.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 68.2 bits (165), Expect = 2.9e-12
Identity = 38/65 (58.46%), Postives = 49/65 (75.38%), Query Frame = 0


Query: 3  DSSQSLSNQVGEAKGQTQEKASNLMDRASEAAQSTKESLQEAGQQMQAKAQGAVDAVKDA 62
          D+ Q+ S Q G+A GQT+EKA  +MD+A +AA S ++SLQ+ GQQM+ KAQGA D VKD 
Sbjct: 2  DNKQNASYQAGQATGQTKEKAGGMMDKAKDAAASAQDSLQQTGQQMKEKAQGAADVVKDK 61

Query: 63 TGMKK 68
          TGM K
Sbjct: 62 TGMNK 66

[Close]

BLAST of Csor.00g208210 vs. TAIR 10
Match: AT5G15970.1 (stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsive protein (COR6.6) / cold-regulated protein (COR6.6) )

HSP 1 Score: 40.8 bits (94), Expect = 5.0e-04
Identity = 24/57 (42.11%), Postives = 38/57 (66.67%), Query Frame = 0


Query: 11 QVGEAKGQTQEKASNLMDRASEAAQSTKESLQEAGQQMQAKAQGAVDAVKDATGMKK 68
          Q G+A G+ +EK++ L+D+A +AA +   S Q+AG+ +   A G V+ VKD TG+ K
Sbjct: 10 QAGQAAGKAEEKSNVLLDKAKDAAAAAGASAQQAGKSISDAAVGGVNFVKDKTGLNK 66

The following BLAST results are available for this feature:

BLAST of Csor.00g208210 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g208210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946705.1	4.20e-31	100.00	stress-induced protein KIN2-like [Cucurbita moschata] >KAG6599040.1 hypothetical...	[more]
XP_023547236.1	1.36e-27	92.54	stress-induced protein KIN2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022946603.1	3.21e-26	91.04	stress-induced protein KIN2-like [Cucurbita moschata] >KAG6599041.1 hypothetical...	[more]
XP_022946698.1	9.21e-26	88.06	stress-induced protein KIN2-like [Cucurbita moschata] >XP_022946702.1 stress-ind...	[more]
XP_022999380.1	5.34e-25	86.57	stress-induced protein KIN2-like [Cucurbita maxima]	[more]

BLAST of Csor.00g208210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G4P7	2.03e-31	100.00	stress-induced protein KIN2-like OS=Cucurbita moschata OX=3662 GN=LOC111450698 P...	[more]
A0A6J1G4B8	1.55e-26	91.04	stress-induced protein KIN2-like OS=Cucurbita moschata OX=3662 GN=LOC111450620 P...	[more]
A0A6J1G4K0	4.46e-26	88.06	stress-induced protein KIN2-like OS=Cucurbita moschata OX=3662 GN=LOC111450690 P...	[more]
A0A6J1KCV0	4.46e-26	88.06	stress-induced protein KIN2-like OS=Cucurbita maxima OX=3661 GN=LOC111493760 PE=...	[more]
A0A6J1KF81	2.58e-25	86.57	stress-induced protein KIN2-like OS=Cucurbita maxima OX=3661 GN=LOC111493769 PE=...	[more]

BLAST of Csor.00g208210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38760.1	1.7e-15	65.67	Late embryogenesis abundant protein (LEA) family protein	[more]
AT5G53820.1	8.2e-15	62.69	Late embryogenesis abundant protein (LEA) family protein	[more]
AT3G02480.1	2.9e-12	58.46	Late embryogenesis abundant protein (LEA) family protein	[more]
AT5G15970.1	5.0e-04	42.11	stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsi...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 27..47
None	No IPR available	GENE3D	6.10.140.1430		coord: 2..46 e-value: 7.5E-6 score: 28.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..67
None	No IPR available	PANTHER	PTHR34191:SF15	BNAA01G32930D PROTEIN	coord: 1..67
IPR039624	Stress-induced protein KIN1/KIN2	PANTHER	PTHR34191	LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEIN	coord: 1..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g208210.m01	Csor.00g208210.m01	mRNA