Csor.00g207470 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g207470
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	NDR1/HIN1-like protein 3
Location	Csor_Chr06: 2549162 .. 2549815 (-)
RNA-Seq Expression	Csor.00g207470
Synteny	Csor.00g207470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCGGCAAGCAACAAACCCACTCGAACGCCGTCACCTACCACCGCCCAGGGCACCACCACAACCGCTGCGGCTCCGGCTGCGGCTGCTTCACCACCTTTCTCAAGGTCCTCATCACCATCATCATCGTAATTGGCCTCGCCGTATTGATCTTATGGCTCATATTCCGTCCCAACAAAGTCAAATTCCACGTCACCGACGCTAAACTCACCCAATTCAACCTCACCGATAATCAGCTTCAATTCAACTTGGCTCTCAACATCACCGCCAGAAACCCCAACAACCGAATCGGAGTGTACTACGACACCATCGAAGCTGCCGCTGTTTACAAAGACCAACGGCTGCAGACCAAGTGGCTTCCCCCGTTCTACCAAGGCCACAAGACCACCGCCGTCCTCAGCCCGGAATTCTCCGGCCAGCAGCTCCTCCTCCTTTCCGGCCAGGGACTGGCACAGTTCAACTCCGAGAAACTCGCCGGAGTTTACGATATTGACGTCGAGCTTAATCTTCGTATCAGGTTGAAATTCGGCGCCGTAAGGATCGGGAAATTTAAGCCGAAGGTGAATTGTGAGTTAAAAGTTACGTTGAGCTCCGATGGAAGCTCAGCTCCGTCGTTGTTTCAGTCCACCGGCTGTGATATTGATTATTGGTAA

mRNA sequence

ATGTCCGGCAAGCAACAAACCCACTCGAACGCCGTCACCTACCACCGCCCAGGGCACCACCACAACCGCTGCGGCTCCGGCTGCGGCTGCTTCACCACCTTTCTCAAGGTCCTCATCACCATCATCATCGTAATTGGCCTCGCCGTATTGATCTTATGGCTCATATTCCGTCCCAACAAAGTCAAATTCCACGTCACCGACGCTAAACTCACCCAATTCAACCTCACCGATAATCAGCTTCAATTCAACTTGGCTCTCAACATCACCGCCAGAAACCCCAACAACCGAATCGGAGTGTACTACGACACCATCGAAGCTGCCGCTGTTTACAAAGACCAACGGCTGCAGACCAAGTGGCTTCCCCCGTTCTACCAAGGCCACAAGACCACCGCCGTCCTCAGCCCGGAATTCTCCGGCCAGCAGCTCCTCCTCCTTTCCGGCCAGGGACTGGCACAGTTCAACTCCGAGAAACTCGCCGGAGTTTACGATATTGACGTCGAGCTTAATCTTCGTATCAGGTTGAAATTCGGCGCCGTAAGGATCGGGAAATTTAAGCCGAAGGTGAATTGTGAGTTAAAAGTTACGTTGAGCTCCGATGGAAGCTCAGCTCCGTCGTTGTTTCAGTCCACCGGCTGTGATATTGATTATTGGTAA

Coding sequence (CDS)

ATGTCCGGCAAGCAACAAACCCACTCGAACGCCGTCACCTACCACCGCCCAGGGCACCACCACAACCGCTGCGGCTCCGGCTGCGGCTGCTTCACCACCTTTCTCAAGGTCCTCATCACCATCATCATCGTAATTGGCCTCGCCGTATTGATCTTATGGCTCATATTCCGTCCCAACAAAGTCAAATTCCACGTCACCGACGCTAAACTCACCCAATTCAACCTCACCGATAATCAGCTTCAATTCAACTTGGCTCTCAACATCACCGCCAGAAACCCCAACAACCGAATCGGAGTGTACTACGACACCATCGAAGCTGCCGCTGTTTACAAAGACCAACGGCTGCAGACCAAGTGGCTTCCCCCGTTCTACCAAGGCCACAAGACCACCGCCGTCCTCAGCCCGGAATTCTCCGGCCAGCAGCTCCTCCTCCTTTCCGGCCAGGGACTGGCACAGTTCAACTCCGAGAAACTCGCCGGAGTTTACGATATTGACGTCGAGCTTAATCTTCGTATCAGGTTGAAATTCGGCGCCGTAAGGATCGGGAAATTTAAGCCGAAGGTGAATTGTGAGTTAAAAGTTACGTTGAGCTCCGATGGAAGCTCAGCTCCGTCGTTGTTTCAGTCCACCGGCTGTGATATTGATTATTGGTAA

Protein sequence

MSGKQQTHSNAVTYHRPGHHHNRCGSGCGCFTTFLKVLITIIIVIGLAVLILWLIFRPNKVKFHVTDAKLTQFNLTDNQLQFNLALNITARNPNNRIGVYYDTIEAAAVYKDQRLQTKWLPPFYQGHKTTAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLKFGAVRIGKFKPKVNCELKVTLSSDGSSAPSLFQSTGCDIDYW

Homology

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BLAST of Csor.00g207470 vs. ExPASy Swiss-Prot
Match: Q9FNH6 (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 3.3e-49
Identity = 102/212 (48.11%), Postives = 134/212 (63.21%), Query Frame = 0


Query: 19  HHHNRCGSGCGC------------FTTFLKVLITIIIVIGLAVLILWLIFRPNKVKFHVT 78
           H H R G GCGC             +    +LITI +++G+A LI+WLIFRPN +KFHVT
Sbjct: 21  HSHGRRGGGCGCLGDCLGCCGCCILSVIFNILITIAVLLGIAALIIWLIFRPNAIKFHVT 80

Query: 79  DAKLTQFNL-TDNQLQFNLALNITARNPNNRIGVYYDTIEAAAVYKDQRL-QTKWLPPFY 138
           DAKLT+F L   N L++NL LN T RNPN RIGVYYD IE    Y DQR   +  +  FY
Sbjct: 81  DAKLTEFTLDPTNNLRYNLDLNFTIRNPNRRIGVYYDEIEVRGYYGDQRFGMSNNISKFY 140

Query: 139 QGHKTTAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLKFGAVRIGKF 198
           QGHK T V+  +  GQQL+LL G      N +  + +Y ID +L L+IR KFG ++  +F
Sbjct: 141 QGHKNTTVVGTKLVGQQLVLLDGGERKDLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRF 200

Query: 199 KPKVNCELKVTLSSDGSSAPSLFQSTGCDIDY 217
           KPK+ C+LKV L+S+ +S   +FQ T CD+D+
Sbjct: 201 KPKIKCDLKVPLTSNSTSG-FVFQPTKCDVDF 231

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BLAST of Csor.00g207470 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.1e-48
Identity = 99/209 (47.37%), Postives = 142/209 (67.94%), Query Frame = 0


Query: 14  YHRPGHHHNRCGSGCGC--FTTFLKVLITIIIVIGLAVLILWLIFRPNKVKFHVTDAKLT 73
           Y+R GH     G GCGC   + F+KV+I++I+++G+A LI WLI RP  +KFHVTDA LT
Sbjct: 24  YYRRGH-----GRGCGCCLLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLT 83

Query: 74  QFNLT--DNQLQFNLALNITARNPNNRIGVYYDTIEAAAVYKDQRLQTKWLPPFYQGHKT 133
           +F+ T  DN L++NLAL +  RNPN RIG+YYD IEA A Y+ +R  T  L PFYQGHK 
Sbjct: 84  RFDHTSPDNILRYNLALTVPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKN 143

Query: 134 TAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLKFGAVRIGKFKPKVN 193
           T VL+P F GQ L++ +       N+E+++GVY+I+++  LR+R K G ++  + KPKV+
Sbjct: 144 TTVLTPTFQGQNLVIFNAGQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVD 203

Query: 194 C-ELKVTLS-SDGSSAPSLFQSTGCDIDY 217
           C +L++ LS S+G++  S      CD D+
Sbjct: 204 CDDLRLPLSTSNGTTTTSTVFPIKCDFDF 227

[Close]

BLAST of Csor.00g207470 vs. ExPASy Swiss-Prot
Match: Q9SRN1 (NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 3.4e-38
Identity = 81/195 (41.54%), Postives = 115/195 (58.97%), Query Frame = 0


Query: 23  RCGSGCGCFTTFLKVLITIIIVIGLAVLILWLIFRPNKVKFHVTDAKLTQFNL-TDNQLQ 82
           RC  GC   +    +LI + +++G+A LILWLIFRPN VKF+V DA L +F+   +N L 
Sbjct: 45  RC-CGCCILSLICNILIAVAVILGVAALILWLIFRPNAVKFYVADANLNRFSFDPNNNLH 104

Query: 83  FNLALNITARNPNNRIGVYYDTIEAAAVYKDQRLQTKWLPPFYQGHKTTAVLSPEFSGQQ 142
           ++L LN T RNPN R+GVYYD    +  Y DQR  +  +  FYQGHK T V+  +  GQ 
Sbjct: 105 YSLDLNFTIRNPNQRVGVYYDEFSVSGYYGDQRFGSANVSSFYQGHKNTTVILTKIEGQN 164

Query: 143 LLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLKFGAVRIGKFKPKVNC-ELKVTLSSDG 202
           L++L          ++ +G+Y I+ +L L +R KF  ++  K KPK+ C +LK+ L S  
Sbjct: 165 LVVLGDGARTDLKDDEKSGIYRINAKLRLSVRFKFWFIKSWKLKPKIKCDDLKIPLGSSN 224

Query: 203 SSAPSLFQSTGCDID 216
           S+    FQ   CD D
Sbjct: 225 STGGFKFQPVQCDFD 238

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BLAST of Csor.00g207470 vs. ExPASy Swiss-Prot
Match: Q9C615 (Putative syntaxin-24 OS=Arabidopsis thaliana OX=3702 GN=SYP24 PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 7.3e-25
Identity = 61/148 (41.22%), Postives = 89/148 (60.14%), Query Frame = 0


Query: 57  RPNKVKFHVTDAKLTQFNL-TDNQLQFNLALNITARNPNNRIGVYYDTIEAAAVYKDQRL 116
           R N VKF V DA+LT F+L ++N LQ++L+LN++ RN  + IG++YD  EA   Y +QRL
Sbjct: 3   RSNDVKFQVYDAELTHFDLESNNNLQYSLSLNLSIRNSKSSIGIHYDRFEATVYYMNQRL 62

Query: 117 QTKWLPPFYQGHKTTAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLK 176
               +P FY G K T +L   F GQ L+LL G    +F  ++  GVY IDV+L++  R+ 
Sbjct: 63  GAVPMPLFYLGSKNTMLLRALFEGQTLVLLKGNERKKFEDDQKTGVYRIDVKLSINFRVM 122

Query: 177 FGAVRIGKFKPKVNCELKVTLSSDGSSA 204
              +     KP V C LK+ L+   S++
Sbjct: 123 VLHLVTWPMKPVVRCHLKIPLALGSSNS 150

[Close]

BLAST of Csor.00g207470 vs. ExPASy Swiss-Prot
Match: Q9SJ54 (NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.6e-19
Identity = 56/175 (32.00%), Postives = 94/175 (53.71%), Query Frame = 0


Query: 25  GSGCGCFTTFLKVLITIIIVIGLAVLILWLIFRPNKVKFHVTDAKLTQFNLTD-NQLQFN 84
           G G G  +    V+I  II++ + + ++W+I +P K +F + DA +  FNL+  N L  N
Sbjct: 12  GGGGGTASRICGVIIGFIIIVLITIFLVWIILQPTKPRFILQDATVYAFNLSQPNLLTSN 71

Query: 85  LALNITARNPNNRIGVYYDTIEAAAVYKDQRLQTKW-LPPFYQGHKTTAVLSPEFSGQQL 144
             + I +RN N+RIG+YYD +   A Y++Q++  +  +PP YQGHK   V SP   G  +
Sbjct: 72  FQITIASRNRNSRIGIYYDRLHVYATYRNQQITLRTAIPPTYQGHKEDNVWSPFVYGNSV 131

Query: 145 LLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLKFGAVRIGKFKPKVNCELKVTLS 198
            +     +A    E+  G   + +  + R+R K G +  GK+   V C+  + L+
Sbjct: 132 PIAPFNAVA-LGDEQNRGFVTLIIRADGRVRWKVGTLITGKYHLHVRCQAFINLA 185

[Close]

BLAST of Csor.00g207470 vs. NCBI nr
Match: KAG6596608.1 (NDR1/HIN1-like protein 10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 439 bits (1128), Expect = 2.69e-155
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MSGKQQTHSNAVTYHRPGHHHNRCGSGCGCFTTFLKVLITIIIVIGLAVLILWLIFRPNK 60
           MSGKQQTHSNAVTYHRPGHHHNRCGSGCGCFTTFLKVLITIIIVIGLAVLILWLIFRPNK
Sbjct: 1   MSGKQQTHSNAVTYHRPGHHHNRCGSGCGCFTTFLKVLITIIIVIGLAVLILWLIFRPNK 60

Query: 61  VKFHVTDAKLTQFNLTDNQLQFNLALNITARNPNNRIGVYYDTIEAAAVYKDQRLQTKWL 120
           VKFHVTDAKLTQFNLTDNQLQFNLALNITARNPNNRIGVYYDTIEAAAVYKDQRLQTKWL
Sbjct: 61  VKFHVTDAKLTQFNLTDNQLQFNLALNITARNPNNRIGVYYDTIEAAAVYKDQRLQTKWL 120

Query: 121 PPFYQGHKTTAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLKFGAVR 180
           PPFYQGHKTTAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLKFGAVR
Sbjct: 121 PPFYQGHKTTAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLKFGAVR 180

Query: 181 IGKFKPKVNCELKVTLSSDGSSAPSLFQSTGCDIDYW 217
           IGKFKPKVNCELKVTLSSDGSSAPSLFQSTGCDIDYW
Sbjct: 181 IGKFKPKVNCELKVTLSSDGSSAPSLFQSTGCDIDYW 217

[Close]

BLAST of Csor.00g207470 vs. NCBI nr
Match: XP_022945227.1 (NDR1/HIN1-like protein 3 [Cucurbita moschata])

HSP 1 Score: 438 bits (1127), Expect = 3.82e-155
Identity = 216/217 (99.54%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MSGKQQTHSNAVTYHRPGHHHNRCGSGCGCFTTFLKVLITIIIVIGLAVLILWLIFRPNK 60
           MSGKQQTHSNAVTYHRPGHHHNRCGSGCGCFTTFLKVLITIIIVIGLAVLILWLIFRPNK
Sbjct: 1   MSGKQQTHSNAVTYHRPGHHHNRCGSGCGCFTTFLKVLITIIIVIGLAVLILWLIFRPNK 60

Query: 61  VKFHVTDAKLTQFNLTDNQLQFNLALNITARNPNNRIGVYYDTIEAAAVYKDQRLQTKWL 120
           VKFHVTDAKLTQFNLTDNQLQFNLALNITARNPNNRIGVYYDTIEAAAVYKDQRLQTKWL
Sbjct: 61  VKFHVTDAKLTQFNLTDNQLQFNLALNITARNPNNRIGVYYDTIEAAAVYKDQRLQTKWL 120

Query: 121 PPFYQGHKTTAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLKFGAVR 180
           PPFYQGHKTTAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLKFGA+R
Sbjct: 121 PPFYQGHKTTAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLKFGAIR 180

Query: 181 IGKFKPKVNCELKVTLSSDGSSAPSLFQSTGCDIDYW 217
           IGKFKPKVNCELKVTLSSDGSSAPSLFQSTGCDIDYW
Sbjct: 181 IGKFKPKVNCELKVTLSSDGSSAPSLFQSTGCDIDYW 217

[Close]

BLAST of Csor.00g207470 vs. NCBI nr
Match: XP_023539525.1 (NDR1/HIN1-like protein 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 425 bits (1092), Expect = 8.60e-150
Identity = 213/218 (97.71%), Postives = 214/218 (98.17%), Query Frame = 0


Query: 1   MSGKQQTHSNAVTYHRPGHHH-NRCGSGCGCFTTFLKVLITIIIVIGLAVLILWLIFRPN 60
           MSGKQQT SNAVTYHRPGHHH NRCGSGCGCFTTFLKVLITIIIVIGLAVLILWLIFRPN
Sbjct: 1   MSGKQQTPSNAVTYHRPGHHHHNRCGSGCGCFTTFLKVLITIIIVIGLAVLILWLIFRPN 60

Query: 61  KVKFHVTDAKLTQFNLTDNQLQFNLALNITARNPNNRIGVYYDTIEAAAVYKDQRLQTKW 120
           KVKFHVTDAKLTQFNLTDNQL FNLALNITARNPN RIGVYYDTIEAAAVYKDQRLQTKW
Sbjct: 61  KVKFHVTDAKLTQFNLTDNQLHFNLALNITARNPNKRIGVYYDTIEAAAVYKDQRLQTKW 120

Query: 121 LPPFYQGHKTTAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLKFGAV 180
           LPPFYQGHKTTAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLKFGAV
Sbjct: 121 LPPFYQGHKTTAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLKFGAV 180

Query: 181 RIGKFKPKVNCELKVTLSSDGSSAPSLFQSTGCDIDYW 217
           RIGKFKPKVNCE+KVTLSSDGSSAPSLFQSTGCDIDYW
Sbjct: 181 RIGKFKPKVNCEVKVTLSSDGSSAPSLFQSTGCDIDYW 218

[Close]

BLAST of Csor.00g207470 vs. NCBI nr
Match: KAG7028147.1 (NDR1/HIN1-like protein 10, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 431 bits (1107), Expect = 3.44e-147
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 5   QQTHSNAVTYHRPGHHHNRCGSGCGCFTTFLKVLITIIIVIGLAVLILWLIFRPNKVKFH 64
           QQTHSNAVTYHRPGHHHNRCGSGCGCFTTFLKVLITIIIVIGLAVLILWLIFRPNKVKFH
Sbjct: 333 QQTHSNAVTYHRPGHHHNRCGSGCGCFTTFLKVLITIIIVIGLAVLILWLIFRPNKVKFH 392

Query: 65  VTDAKLTQFNLTDNQLQFNLALNITARNPNNRIGVYYDTIEAAAVYKDQRLQTKWLPPFY 124
           VTDAKLTQFNLTDNQLQFNLALNITARNPNNRIGVYYDTIEAAAVYKDQRLQTKWLPPFY
Sbjct: 393 VTDAKLTQFNLTDNQLQFNLALNITARNPNNRIGVYYDTIEAAAVYKDQRLQTKWLPPFY 452

Query: 125 QGHKTTAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLKFGAVRIGKF 184
           QGHKTTAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLKFGAVRIGKF
Sbjct: 453 QGHKTTAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLKFGAVRIGKF 512

Query: 185 KPKVNCELKVTLSSDGSSAPSLFQSTGCDIDYW 217
           KPKVNCELKVTLSSDGSSAPSLFQSTGCDIDYW
Sbjct: 513 KPKVNCELKVTLSSDGSSAPSLFQSTGCDIDYW 545

[Close]

BLAST of Csor.00g207470 vs. NCBI nr
Match: XP_023005762.1 (NDR1/HIN1-like protein 10 [Cucurbita maxima])

HSP 1 Score: 418 bits (1074), Expect = 4.61e-147
Identity = 207/217 (95.39%), Postives = 211/217 (97.24%), Query Frame = 0


Query: 1   MSGKQQTHSNAVTYHRPGHHHNRCGSGCGCFTTFLKVLITIIIVIGLAVLILWLIFRPNK 60
           MSGKQQT SNAVTYHRPGHHHN CGSGCG FTTFLKVL+TIIIVIGLAVLILWLIFRPNK
Sbjct: 1   MSGKQQTPSNAVTYHRPGHHHNHCGSGCGSFTTFLKVLVTIIIVIGLAVLILWLIFRPNK 60

Query: 61  VKFHVTDAKLTQFNLTDNQLQFNLALNITARNPNNRIGVYYDTIEAAAVYKDQRLQTKWL 120
           VKFHVTDAKLTQFNLTDNQL FNLALNIT RNPN+RIGVYYDTIEAAAVYKDQRLQTKWL
Sbjct: 61  VKFHVTDAKLTQFNLTDNQLHFNLALNITVRNPNSRIGVYYDTIEAAAVYKDQRLQTKWL 120

Query: 121 PPFYQGHKTTAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLKFGAVR 180
           PPFYQGHKTTAVLSPEFSGQQLLLLSGQGLAQF+SEKLAGVYDIDVELNLRIRLK GAVR
Sbjct: 121 PPFYQGHKTTAVLSPEFSGQQLLLLSGQGLAQFSSEKLAGVYDIDVELNLRIRLKLGAVR 180

Query: 181 IGKFKPKVNCELKVTLSSDGSSAPSLFQSTGCDIDYW 217
           IGKFKPKVNCE+KVTLSSDGSSAPSLFQSTGCDIDYW
Sbjct: 181 IGKFKPKVNCEVKVTLSSDGSSAPSLFQSTGCDIDYW 217

[Close]

BLAST of Csor.00g207470 vs. ExPASy TrEMBL
Match: A0A6J1G0C1 (NDR1/HIN1-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111449529 PE=4 SV=1)

HSP 1 Score: 438 bits (1127), Expect = 1.85e-155
Identity = 216/217 (99.54%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MSGKQQTHSNAVTYHRPGHHHNRCGSGCGCFTTFLKVLITIIIVIGLAVLILWLIFRPNK 60
           MSGKQQTHSNAVTYHRPGHHHNRCGSGCGCFTTFLKVLITIIIVIGLAVLILWLIFRPNK
Sbjct: 1   MSGKQQTHSNAVTYHRPGHHHNRCGSGCGCFTTFLKVLITIIIVIGLAVLILWLIFRPNK 60

Query: 61  VKFHVTDAKLTQFNLTDNQLQFNLALNITARNPNNRIGVYYDTIEAAAVYKDQRLQTKWL 120
           VKFHVTDAKLTQFNLTDNQLQFNLALNITARNPNNRIGVYYDTIEAAAVYKDQRLQTKWL
Sbjct: 61  VKFHVTDAKLTQFNLTDNQLQFNLALNITARNPNNRIGVYYDTIEAAAVYKDQRLQTKWL 120

Query: 121 PPFYQGHKTTAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLKFGAVR 180
           PPFYQGHKTTAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLKFGA+R
Sbjct: 121 PPFYQGHKTTAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLKFGAIR 180

Query: 181 IGKFKPKVNCELKVTLSSDGSSAPSLFQSTGCDIDYW 217
           IGKFKPKVNCELKVTLSSDGSSAPSLFQSTGCDIDYW
Sbjct: 181 IGKFKPKVNCELKVTLSSDGSSAPSLFQSTGCDIDYW 217

[Close]

BLAST of Csor.00g207470 vs. ExPASy TrEMBL
Match: A0A6J1KU22 (NDR1/HIN1-like protein 10 OS=Cucurbita maxima OX=3661 GN=LOC111498665 PE=4 SV=1)

HSP 1 Score: 418 bits (1074), Expect = 2.23e-147
Identity = 207/217 (95.39%), Postives = 211/217 (97.24%), Query Frame = 0


Query: 1   MSGKQQTHSNAVTYHRPGHHHNRCGSGCGCFTTFLKVLITIIIVIGLAVLILWLIFRPNK 60
           MSGKQQT SNAVTYHRPGHHHN CGSGCG FTTFLKVL+TIIIVIGLAVLILWLIFRPNK
Sbjct: 1   MSGKQQTPSNAVTYHRPGHHHNHCGSGCGSFTTFLKVLVTIIIVIGLAVLILWLIFRPNK 60

Query: 61  VKFHVTDAKLTQFNLTDNQLQFNLALNITARNPNNRIGVYYDTIEAAAVYKDQRLQTKWL 120
           VKFHVTDAKLTQFNLTDNQL FNLALNIT RNPN+RIGVYYDTIEAAAVYKDQRLQTKWL
Sbjct: 61  VKFHVTDAKLTQFNLTDNQLHFNLALNITVRNPNSRIGVYYDTIEAAAVYKDQRLQTKWL 120

Query: 121 PPFYQGHKTTAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLKFGAVR 180
           PPFYQGHKTTAVLSPEFSGQQLLLLSGQGLAQF+SEKLAGVYDIDVELNLRIRLK GAVR
Sbjct: 121 PPFYQGHKTTAVLSPEFSGQQLLLLSGQGLAQFSSEKLAGVYDIDVELNLRIRLKLGAVR 180

Query: 181 IGKFKPKVNCELKVTLSSDGSSAPSLFQSTGCDIDYW 217
           IGKFKPKVNCE+KVTLSSDGSSAPSLFQSTGCDIDYW
Sbjct: 181 IGKFKPKVNCEVKVTLSSDGSSAPSLFQSTGCDIDYW 217

[Close]

BLAST of Csor.00g207470 vs. ExPASy TrEMBL
Match: A0A6J1CT55 (NDR1/HIN1-like protein 10 OS=Momordica charantia OX=3673 GN=LOC111014348 PE=4 SV=1)

HSP 1 Score: 337 bits (863), Expect = 4.52e-115
Identity = 166/208 (79.81%), Postives = 184/208 (88.46%), Query Frame = 0


Query: 13  TYHRPGHHHNRCGSGCGCF--TTFLKVLITIIIVIGLAVLILWLIFRPNKVKFHVTDAKL 72
           TYHR GH H R   GCGCF  TTFLK+L+TIII+ GLAVLI+WL+FRPNKVKFHVTD KL
Sbjct: 23  TYHRHGHGHRR---GCGCFHFTTFLKILVTIIILAGLAVLIIWLVFRPNKVKFHVTDTKL 82

Query: 73  TQFNLTDNQLQFNLALNITARNPNNRIGVYYDTIEAAAVYKDQRLQTKWLPPFYQGHKTT 132
           TQFNLTDNQL++NLALN+T RNPNNRIGVYYDTIEAAAVYKDQRLQT+WLPPFYQGHKTT
Sbjct: 83  TQFNLTDNQLRYNLALNLTVRNPNNRIGVYYDTIEAAAVYKDQRLQTQWLPPFYQGHKTT 142

Query: 133 AVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLKFGAVRIGKFKPKVNC 192
           AVL+P F GQQLLLL+G+GL QFN+EK+AGVYDIDVEL LRIRLKFGAVR+GKFKPKV C
Sbjct: 143 AVLAPTFDGQQLLLLAGEGLTQFNAEKVAGVYDIDVELRLRIRLKFGAVRVGKFKPKVGC 202

Query: 193 ELKVTLS-SDGSSAPSLFQSTGCDIDYW 217
           E KV LS S G+  P +FQ+ GCDIDYW
Sbjct: 203 EFKVPLSTSGGNPVPPVFQTAGCDIDYW 227

[Close]

BLAST of Csor.00g207470 vs. ExPASy TrEMBL
Match: A0A5A7TK31 (NDR1/HIN1-Like protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004470 PE=4 SV=1)

HSP 1 Score: 331 bits (848), Expect = 5.33e-113
Identity = 163/208 (78.37%), Postives = 186/208 (89.42%), Query Frame = 0


Query: 13  TYHRPGHHHN--RCGSGCGCFTTFLKVLITIIIVIGLAVLILWLIFRPNKVKFHVTDAKL 72
           TYHRP HHHN  RC  G G F TFLK+LI IIIV+GLAVLILWLIFRPNKVKF+VTDAKL
Sbjct: 6   TYHRPEHHHNHCRCSCGGGRFITFLKILIAIIIVVGLAVLILWLIFRPNKVKFNVTDAKL 65

Query: 73  TQFNLTDNQLQFNLALNITARNPNNRIGVYYDTIEAAAVYKDQRLQTKWLPPFYQGHKTT 132
           TQFNL DNQL FN ALN+T RNPN RIGVYYDTIE++A+YK+QRLQT+WLPPFYQG+KTT
Sbjct: 66  TQFNLIDNQLHFNFALNVTVRNPNKRIGVYYDTIESSAIYKNQRLQTQWLPPFYQGYKTT 125

Query: 133 AVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLKFGAVRIGKFKPKVNC 192
           AV+S  FSGQQLLLL+GQGL +FN+E++AGVY++++ELNLRIRLKFGAVR+GKFKPKVNC
Sbjct: 126 AVISCVFSGQQLLLLAGQGLTEFNAERVAGVYEMNMELNLRIRLKFGAVRVGKFKPKVNC 185

Query: 193 ELKVTLSSDGSSAP-SLFQSTGCDIDYW 217
           E KV LSSDGSS   S+F+STGCDIDYW
Sbjct: 186 EFKVPLSSDGSSVVGSVFESTGCDIDYW 213

[Close]

BLAST of Csor.00g207470 vs. ExPASy TrEMBL
Match: A0A1S3B7J7 (NDR1/HIN1-Like protein 3-like OS=Cucumis melo OX=3656 GN=LOC103486670 PE=4 SV=1)

HSP 1 Score: 331 bits (848), Expect = 5.33e-113
Identity = 163/208 (78.37%), Postives = 186/208 (89.42%), Query Frame = 0


Query: 13  TYHRPGHHHN--RCGSGCGCFTTFLKVLITIIIVIGLAVLILWLIFRPNKVKFHVTDAKL 72
           TYHRP HHHN  RC  G G F TFLK+LI IIIV+GLAVLILWLIFRPNKVKF+VTDAKL
Sbjct: 6   TYHRPEHHHNHCRCSCGGGRFITFLKILIAIIIVVGLAVLILWLIFRPNKVKFNVTDAKL 65

Query: 73  TQFNLTDNQLQFNLALNITARNPNNRIGVYYDTIEAAAVYKDQRLQTKWLPPFYQGHKTT 132
           TQFNL DNQL FN ALN+T RNPN RIGVYYDTIE++A+YK+QRLQT+WLPPFYQG+KTT
Sbjct: 66  TQFNLIDNQLHFNFALNVTVRNPNKRIGVYYDTIESSAIYKNQRLQTQWLPPFYQGYKTT 125

Query: 133 AVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLKFGAVRIGKFKPKVNC 192
           AV+S  FSGQQLLLL+GQGL +FN+E++AGVY++++ELNLRIRLKFGAVR+GKFKPKVNC
Sbjct: 126 AVISCVFSGQQLLLLAGQGLTEFNAERVAGVYEMNMELNLRIRLKFGAVRVGKFKPKVNC 185

Query: 193 ELKVTLSSDGSSAP-SLFQSTGCDIDYW 217
           E KV LSSDGSS   S+F+STGCDIDYW
Sbjct: 186 EFKVPLSSDGSSVVGSVFESTGCDIDYW 213

[Close]

BLAST of Csor.00g207470 vs. TAIR 10
Match: AT5G06320.1 (NDR1/HIN1-like 3 )

HSP 1 Score: 196.4 bits (498), Expect = 2.3e-50
Identity = 102/212 (48.11%), Postives = 134/212 (63.21%), Query Frame = 0


Query: 19  HHHNRCGSGCGC------------FTTFLKVLITIIIVIGLAVLILWLIFRPNKVKFHVT 78
           H H R G GCGC             +    +LITI +++G+A LI+WLIFRPN +KFHVT
Sbjct: 21  HSHGRRGGGCGCLGDCLGCCGCCILSVIFNILITIAVLLGIAALIIWLIFRPNAIKFHVT 80

Query: 79  DAKLTQFNL-TDNQLQFNLALNITARNPNNRIGVYYDTIEAAAVYKDQRL-QTKWLPPFY 138
           DAKLT+F L   N L++NL LN T RNPN RIGVYYD IE    Y DQR   +  +  FY
Sbjct: 81  DAKLTEFTLDPTNNLRYNLDLNFTIRNPNRRIGVYYDEIEVRGYYGDQRFGMSNNISKFY 140

Query: 139 QGHKTTAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLKFGAVRIGKF 198
           QGHK T V+  +  GQQL+LL G      N +  + +Y ID +L L+IR KFG ++  +F
Sbjct: 141 QGHKNTTVVGTKLVGQQLVLLDGGERKDLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRF 200

Query: 199 KPKVNCELKVTLSSDGSSAPSLFQSTGCDIDY 217
           KPK+ C+LKV L+S+ +S   +FQ T CD+D+
Sbjct: 201 KPKIKCDLKVPLTSNSTSG-FVFQPTKCDVDF 231

[Close]

BLAST of Csor.00g207470 vs. TAIR 10
Match: AT2G35980.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 193.7 bits (491), Expect = 1.5e-49
Identity = 99/209 (47.37%), Postives = 142/209 (67.94%), Query Frame = 0


Query: 14  YHRPGHHHNRCGSGCGC--FTTFLKVLITIIIVIGLAVLILWLIFRPNKVKFHVTDAKLT 73
           Y+R GH     G GCGC   + F+KV+I++I+++G+A LI WLI RP  +KFHVTDA LT
Sbjct: 24  YYRRGH-----GRGCGCCLLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLT 83

Query: 74  QFNLT--DNQLQFNLALNITARNPNNRIGVYYDTIEAAAVYKDQRLQTKWLPPFYQGHKT 133
           +F+ T  DN L++NLAL +  RNPN RIG+YYD IEA A Y+ +R  T  L PFYQGHK 
Sbjct: 84  RFDHTSPDNILRYNLALTVPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKN 143

Query: 134 TAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLKFGAVRIGKFKPKVN 193
           T VL+P F GQ L++ +       N+E+++GVY+I+++  LR+R K G ++  + KPKV+
Sbjct: 144 TTVLTPTFQGQNLVIFNAGQSRTLNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVD 203

Query: 194 C-ELKVTLS-SDGSSAPSLFQSTGCDIDY 217
           C +L++ LS S+G++  S      CD D+
Sbjct: 204 CDDLRLPLSTSNGTTTTSTVFPIKCDFDF 227

[Close]

BLAST of Csor.00g207470 vs. TAIR 10
Match: AT2G35460.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 167.5 bits (423), Expect = 1.1e-41
Identity = 87/218 (39.91%), Postives = 124/218 (56.88%), Query Frame = 0


Query: 13  TYHRPGHHHNRCGSG-CGCFTTFL------------KVLITIIIVIGLAVLILWLIFRPN 72
           TY+  G   +  G G CGCF++ L             +LI +++ +G+  LILW I RPN
Sbjct: 20  TYYSHGRRGSDVGCGICGCFSSCLLCCGGCLVNIICNILIGVLVCLGVVALILWFILRPN 79

Query: 73  KVKFHVTDAKLTQFNL--TDNQLQFNLALNITARNPNNRIGVYYDTIEAAAVYKDQRLQT 132
            VKF VT+A LT+F      + L +N++LN + RNPN R+G++YD +E    Y DQR   
Sbjct: 80  VVKFQVTEADLTRFEFDPRSHNLHYNISLNFSIRNPNQRLGIHYDQLEVRGYYGDQRFSA 139

Query: 133 KWLPPFYQGHKTTAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLKFG 192
             +  FYQGHK T V+  E +GQ+L+LL   G   F  ++ +GVY IDV+L  ++R KFG
Sbjct: 140 ANMTSFYQGHKNTTVVGTELNGQKLVLLGAGGRRDFREDRRSGVYRIDVKLRFKLRFKFG 199

Query: 193 AVRIGKFKPKVNCELKVTLSSDGSSAPSLFQSTGCDID 216
            +     +PK+ C LKV LS+  S     F  T C +D
Sbjct: 200 FLNSWAVRPKIKCHLKVPLSTSSSDERFQFHPTKCHVD 237

[Close]

BLAST of Csor.00g207470 vs. TAIR 10
Match: AT3G11650.1 (NDR1/HIN1-like 2 )

HSP 1 Score: 159.8 bits (403), Expect = 2.4e-39
Identity = 81/195 (41.54%), Postives = 115/195 (58.97%), Query Frame = 0


Query: 23  RCGSGCGCFTTFLKVLITIIIVIGLAVLILWLIFRPNKVKFHVTDAKLTQFNL-TDNQLQ 82
           RC  GC   +    +LI + +++G+A LILWLIFRPN VKF+V DA L +F+   +N L 
Sbjct: 45  RC-CGCCILSLICNILIAVAVILGVAALILWLIFRPNAVKFYVADANLNRFSFDPNNNLH 104

Query: 83  FNLALNITARNPNNRIGVYYDTIEAAAVYKDQRLQTKWLPPFYQGHKTTAVLSPEFSGQQ 142
           ++L LN T RNPN R+GVYYD    +  Y DQR  +  +  FYQGHK T V+  +  GQ 
Sbjct: 105 YSLDLNFTIRNPNQRVGVYYDEFSVSGYYGDQRFGSANVSSFYQGHKNTTVILTKIEGQN 164

Query: 143 LLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLKFGAVRIGKFKPKVNC-ELKVTLSSDG 202
           L++L          ++ +G+Y I+ +L L +R KF  ++  K KPK+ C +LK+ L S  
Sbjct: 165 LVVLGDGARTDLKDDEKSGIYRINAKLRLSVRFKFWFIKSWKLKPKIKCDDLKIPLGSSN 224

Query: 203 SSAPSLFQSTGCDID 216
           S+    FQ   CD D
Sbjct: 225 STGGFKFQPVQCDFD 238

[Close]

BLAST of Csor.00g207470 vs. TAIR 10
Match: AT1G32270.1 (syntaxin, putative )

HSP 1 Score: 115.5 bits (288), Expect = 5.2e-26
Identity = 61/148 (41.22%), Postives = 89/148 (60.14%), Query Frame = 0


Query: 57  RPNKVKFHVTDAKLTQFNL-TDNQLQFNLALNITARNPNNRIGVYYDTIEAAAVYKDQRL 116
           R N VKF V DA+LT F+L ++N LQ++L+LN++ RN  + IG++YD  EA   Y +QRL
Sbjct: 3   RSNDVKFQVYDAELTHFDLESNNNLQYSLSLNLSIRNSKSSIGIHYDRFEATVYYMNQRL 62

Query: 117 QTKWLPPFYQGHKTTAVLSPEFSGQQLLLLSGQGLAQFNSEKLAGVYDIDVELNLRIRLK 176
               +P FY G K T +L   F GQ L+LL G    +F  ++  GVY IDV+L++  R+ 
Sbjct: 63  GAVPMPLFYLGSKNTMLLRALFEGQTLVLLKGNERKKFEDDQKTGVYRIDVKLSINFRVM 122

Query: 177 FGAVRIGKFKPKVNCELKVTLSSDGSSA 204
              +     KP V C LK+ L+   S++
Sbjct: 123 VLHLVTWPMKPVVRCHLKIPLALGSSNS 150

The following BLAST results are available for this feature:

BLAST of Csor.00g207470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNH6	3.3e-49	48.11	NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1	[more]
Q9SJ52	2.1e-48	47.37	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]
Q9SRN1	3.4e-38	41.54	NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1	[more]
Q9C615	7.3e-25	41.22	Putative syntaxin-24 OS=Arabidopsis thaliana OX=3702 GN=SYP24 PE=3 SV=1	[more]
Q9SJ54	1.6e-19	32.00	NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1	[more]

BLAST of Csor.00g207470 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6596608.1	2.69e-155	100.00	NDR1/HIN1-like protein 10, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022945227.1	3.82e-155	99.54	NDR1/HIN1-like protein 3 [Cucurbita moschata]	[more]
XP_023539525.1	8.60e-150	97.71	NDR1/HIN1-like protein 3 [Cucurbita pepo subsp. pepo]	[more]
KAG7028147.1	3.44e-147	100.00	NDR1/HIN1-like protein 10, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023005762.1	4.61e-147	95.39	NDR1/HIN1-like protein 10 [Cucurbita maxima]	[more]

BLAST of Csor.00g207470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G0C1	1.85e-155	99.54	NDR1/HIN1-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111449529 PE=4 SV=1	[more]
A0A6J1KU22	2.23e-147	95.39	NDR1/HIN1-like protein 10 OS=Cucurbita maxima OX=3661 GN=LOC111498665 PE=4 SV=1	[more]
A0A6J1CT55	4.52e-115	79.81	NDR1/HIN1-like protein 10 OS=Momordica charantia OX=3673 GN=LOC111014348 PE=4 SV...	[more]
A0A5A7TK31	5.33e-113	78.37	NDR1/HIN1-Like protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3B7J7	5.33e-113	78.37	NDR1/HIN1-Like protein 3-like OS=Cucumis melo OX=3656 GN=LOC103486670 PE=4 SV=1	[more]

BLAST of Csor.00g207470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06320.1	2.3e-50	48.11	NDR1/HIN1-like 3	[more]
AT2G35980.1	1.5e-49	47.37	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G35460.1	1.1e-41	39.91	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G11650.1	2.4e-39	41.54	NDR1/HIN1-like 2	[more]
AT1G32270.1	5.2e-26	41.22	syntaxin, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 88..190 e-value: 1.0E-12 score: 48.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR31415:SF105	LATE EMBRYOGENESIS ABUNDANT PROTEIN	coord: 18..214
IPR044839	Protein NDR1-like	PANTHER	PTHR31415	OS05G0367900 PROTEIN	coord: 18..214

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g207470.m01	Csor.00g207470.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098542	defense response to other organism
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma