Csor.00g207310 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAACACTGCGAATCATACCTAACCCACTTTCTTACTCGATCCACCTGCAATTAACTCCTTCCGACCTTTCTATCAATCCCTTATCGCACATATCGCGCTCAATTTTACAGGTGAGGCCTCCATTTCTTTCGATTGTTTACACTGTCCTTCTGCTTTTCTGGAATGAGATTATTGTGTTTAAATGCAGATGGTATGTTTAATTAAAGGAATCTTCCATGGGAAGCATTACCACGCAGCTCACATAGCCGCTATATTAAGCAGGGCTTGGAGTGCTGGGGTTGAGCGAATCGTTGTGAGTCTTTCTTTATGTTGTTTTTTTAATCTCTATTAGCTTGCGATTGTGAAGGATTATCCCCCATTTCCGGGTTCTTGATCTGTTGAGCTCTATTGGTAGATTGTGAATGTTCGTTCTGTGTTGATGTATTAGTACCAATCCAACTTATGGTGGTTGATAAAATCTATCATCATTCAGATTTAATTTCAATTTTCAATCTCTTTGAATACTTCTTTGAACTCTTCCACGATTAGGTAAGTTTGAGATCCCACTTCGGTTGGGGAGGAGAAGGAAACATTCTTTATATGTGTGTGGAAATATCTTCGATATGAACCAAGAGATATCAATTATAAATTTTGGGTGGATCATAATTTAAAGTAATTTAGAATTGATGTTTCTTTGTGAAAGTTACAACTCTTGAAAAGCCTCATGGAAGGTTAAGAGTTTTCATTTTGAGGCTATATAATGTCATTATGTTATCTTTCTAAGATAGACTTAGAAAATGTAGTAAAAAGAGCATTTGTGCTCTCTTTAGCCAATGGCTAAGTTCTTCTATGCAGTTTAGGTTGCACGTAGAATCATTCAAGTTCGACATGATGAATTTTGCTTATGGAGTGATTCGAATCTCAAACAGCTGTTCCTGCCTTGAGATATTTTTTATCAACAAGAATCATTCAAGCTAGACATGATCAATCTTGCTTGTAGAGTGATTCGAATCTCAAACAAGTATTTTTGCCTTGAGATATTCAATCAACAAGATGATCTGAATCTTACTCTCCTAATAGTGATTCCATATCATTTGGTATCGGAGCTTTTCTCCTAAGAAGTGGGTTTGAGCCATGAGAGTAAGCTTAGAATTCTTTTTAGTACAAGAAATTCGAAGGGATAAAAAAAGCATGGATTATGTTACAAAGATAATGTAGTTTATTACATAAACCAAAAGCAAACATCACAGTTATCTTTATACAAACCCACAAGCCAAGCATCTTTGTTCAGTAAAAATTGCTTATGAATTTCTGAATTTAAACAACCAAACACTAGAGTTCATAGACATTCTTCTTATTCTACATTGAGGGTCACATACAGAGTGCAGAATTCATACTTTTGATGCTCTTATTCTTCAAACAAACCCTTTTGTTTACTGCAATAACTTCATACTGGATATCTGTTTGGATGAATCTTTTGTTTCTCTCAGCTACCTCTCATTATGAGATGCAGAACAGAGAGATAAGAATCATCATATAG ATGGGAACACTGCGAATCATACCTAACCCACTTTCTTACTCGATCCACCTGCAATTAACTCCTTCCGACCTTTCTATCAATCCCTTATCGCACATATCGCGCTCAATTTTACAGATGGTATGTTTAATTAAAGGAATCTTCCATGGGAAGCATTACCACGCAGCTCACATAGCCGCTATATTAAGCAGGGCTTGGAGTGCTGGGGTTGAGCGAATCGTTAACAGAGAGATAAGAATCATCATATAG ATGGGAACACTGCGAATCATACCTAACCCACTTTCTTACTCGATCCACCTGCAATTAACTCCTTCCGACCTTTCTATCAATCCCTTATCGCACATATCGCGCTCAATTTTACAGATGGTATGTTTAATTAAAGGAATCTTCCATGGGAAGCATTACCACGCAGCTCACATAGCCGCTATATTAAGCAGGGCTTGGAGTGCTGGGGTTGAGCGAATCGTTAACAGAGAGATAAGAATCATCATATAG MGTLRIIPNPLSYSIHLQLTPSDLSINPLSHISRSILQMVCLIKGIFHGKHYHAAHIAAILSRAWSAGVERIVNREIRIII Homology
BLAST of Csor.00g207310 vs. NCBI nr
Match: KAG6596624.1 (hypothetical protein SDJN03_09804, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 159 bits (402), Expect = 5.45e-49 Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0
BLAST of Csor.00g207310 vs. NCBI nr
Match: KAG7028161.1 (hypothetical protein SDJN02_09341 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 145 bits (367), Expect = 2.56e-42 Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0
BLAST of Csor.00g207310 vs. NCBI nr
Match: XP_022936739.1 (uncharacterized protein LOC111443234 isoform X2 [Cucurbita moschata]) HSP 1 Score: 137 bits (346), Expect = 3.17e-40 Identity = 69/73 (94.52%), Postives = 70/73 (95.89%), Query Frame = 0
BLAST of Csor.00g207310 vs. NCBI nr
Match: XP_022936731.1 (uncharacterized protein LOC111443234 isoform X1 [Cucurbita moschata]) HSP 1 Score: 137 bits (346), Expect = 3.37e-40 Identity = 69/73 (94.52%), Postives = 70/73 (95.89%), Query Frame = 0
BLAST of Csor.00g207310 vs. NCBI nr
Match: ONM27784.1 (TatD related DNase [Zea mays]) HSP 1 Score: 57.0 bits (136), Expect = 3.06e-07 Identity = 29/64 (45.31%), Postives = 43/64 (67.19%), Query Frame = 0
BLAST of Csor.00g207310 vs. ExPASy TrEMBL
Match: A0A6J1F950 (uncharacterized protein LOC111443234 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111443234 PE=4 SV=1) HSP 1 Score: 137 bits (346), Expect = 1.53e-40 Identity = 69/73 (94.52%), Postives = 70/73 (95.89%), Query Frame = 0
BLAST of Csor.00g207310 vs. ExPASy TrEMBL
Match: A0A6J1F8B1 (uncharacterized protein LOC111443234 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443234 PE=4 SV=1) HSP 1 Score: 137 bits (346), Expect = 1.63e-40 Identity = 69/73 (94.52%), Postives = 70/73 (95.89%), Query Frame = 0
BLAST of Csor.00g207310 vs. ExPASy TrEMBL
Match: A0A1D6F9F5 (TatD related DNase OS=Zea mays OX=4577 GN=100282974 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 1.48e-07 Identity = 29/64 (45.31%), Postives = 43/64 (67.19%), Query Frame = 0
BLAST of Csor.00g207310 vs. ExPASy TrEMBL
Match: A0A1D6F9F8 (TatD related DNase OS=Zea mays OX=4577 GN=100282974 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 1.89e-07 Identity = 29/64 (45.31%), Postives = 43/64 (67.19%), Query Frame = 0
BLAST of Csor.00g207310 vs. ExPASy TrEMBL
Match: A0A6J1DC11 (putative deoxyribonuclease TATDN1 OS=Momordica charantia OX=3673 GN=LOC111019331 PE=4 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 2.38e-07 Identity = 25/32 (78.12%), Postives = 29/32 (90.62%), Query Frame = 0
BLAST of Csor.00g207310 vs. TAIR 10
Match: AT3G52390.1 (TatD related DNase ) HSP 1 Score: 46.2 bits (108), Expect = 1.4e-05 Identity = 18/32 (56.25%), Postives = 26/32 (81.25%), Query Frame = 0
BLAST of Csor.00g207310 vs. TAIR 10
Match: AT3G52390.2 (TatD related DNase ) HSP 1 Score: 46.2 bits (108), Expect = 1.4e-05 Identity = 18/32 (56.25%), Postives = 26/32 (81.25%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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