Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTATCTCTAAATCTTTGTCTCTTACTTTTCTTCTACTCCTTGGTTTAGGCTTAGCTTCGGCGGCCAGAACCCTTCTCTCTTATGATCCTCCACATCACTCCGATGTAGGCTATGGATACCAGCATAACCCAAGAGTAGGGTATGATCATGACCATCATGATGGACCTTATGGTGCATATGGTGGTGGGTCTGGCGGAGGATATGGAGCTGGAGCTGGCTCTTCTCTTGGTGGCTCTGGATATGGAAGTGGCGGCGGCGGTGGCGGTGGTTCTGGCTATGCAGGTGTAGGAGACGTTGGAGGTAGTGGATATGGAAGCGGTGGTGGTGGAGGAAGTGGTGTAGGATATGGGGATTTGGGTGGACATGGGAAAGGCTATGGTAGTGGTGGTGGTGGAGGGAGTGGTGTAGGATATGGGGATTTGGGTGGACATGGGAAAGGCTATGGTAGTGGTGGTGGTGGAGGGAGTGGTGTAGGATATGGGGATTTGGGTGGACATGGAAAGGGGTATGGTAGCGGTGGTGGTGGAGGAAGTGGTGTAGGATATGGGGATTTGGGTGGACATGGAAAGGGCTATGGTAGCGGTGGTGGTGGAGGGAGTGGATATGGCGGTGGAGCTGATCATGGAGTTGGGTATGGTAGCGGCGGAGGTGGAGGATATGGAGCTGGAGGTGGAGCTGGATATGGTCCAGGAGGAGACCATGGTGTTGGCTATGGGAGTGGAGGAGGGGGTGGGTCAGGTGGTGGTTATGGTGGTGGAGCCAAAGGGTATGGTGGTGGTGCTAAAGGAAGTGGGTATGGGAGTGGCGGCGGCGCCGGAAGTGGCTACGGTGGTGTTGGTGGTGAAGAAGGAGGATATGATGGTGGATATTGA
mRNA sequence
ATGGCTATCTCTAAATCTTTGTCTCTTACTTTTCTTCTACTCCTTGGTTTAGGCTTAGCTTCGGCGGCCAGAACCCTTCTCTCTTATGATCCTCCACATCACTCCGATGTAGGCTATGGATACCAGCATAACCCAAGAGTAGGGTATGATCATGACCATCATGATGGACCTTATGGTGCATATGGTGGTGGGTCTGGCGGAGGATATGGAGCTGGAGCTGGCTCTTCTCTTGGTGGCTCTGGATATGGAAGTGGCGGCGGCGGTGGCGGTGGTTCTGGCTATGCAGGTGTAGGAGACGTTGGAGGTAGTGGATATGGAAGCGGTGGTGGTGGAGGAAGTGGTGTAGGATATGGGGATTTGGGTGGACATGGGAAAGGCTATGGTAGTGGTGGTGGTGGAGGGAGTGGTGTAGGATATGGGGATTTGGGTGGACATGGGAAAGGCTATGGTAGTGGTGGTGGTGGAGGGAGTGGTGTAGGATATGGGGATTTGGGTGGACATGGAAAGGGGTATGGTAGCGGTGGTGGTGGAGGAAGTGGTGTAGGATATGGGGATTTGGGTGGACATGGAAAGGGCTATGGTAGCGGTGGTGGTGGAGGGAGTGGATATGGCGGTGGAGCTGATCATGGAGTTGGGTATGGTAGCGGCGGAGGTGGAGGATATGGAGCTGGAGGTGGAGCTGGATATGGTCCAGGAGGAGACCATGGTGTTGGCTATGGGAGTGGAGGAGGGGGTGGGTCAGGTGGTGGTTATGGTGGTGGAGCCAAAGGGTATGGTGGTGGTGCTAAAGGAAGTGGGTATGGGAGTGGCGGCGGCGCCGGAAGTGGCTACGGTGGTGTTGGTGGTGAAGAAGGAGGATATGATGGTGGATATTGA
Coding sequence (CDS)
ATGGCTATCTCTAAATCTTTGTCTCTTACTTTTCTTCTACTCCTTGGTTTAGGCTTAGCTTCGGCGGCCAGAACCCTTCTCTCTTATGATCCTCCACATCACTCCGATGTAGGCTATGGATACCAGCATAACCCAAGAGTAGGGTATGATCATGACCATCATGATGGACCTTATGGTGCATATGGTGGTGGGTCTGGCGGAGGATATGGAGCTGGAGCTGGCTCTTCTCTTGGTGGCTCTGGATATGGAAGTGGCGGCGGCGGTGGCGGTGGTTCTGGCTATGCAGGTGTAGGAGACGTTGGAGGTAGTGGATATGGAAGCGGTGGTGGTGGAGGAAGTGGTGTAGGATATGGGGATTTGGGTGGACATGGGAAAGGCTATGGTAGTGGTGGTGGTGGAGGGAGTGGTGTAGGATATGGGGATTTGGGTGGACATGGGAAAGGCTATGGTAGTGGTGGTGGTGGAGGGAGTGGTGTAGGATATGGGGATTTGGGTGGACATGGAAAGGGGTATGGTAGCGGTGGTGGTGGAGGAAGTGGTGTAGGATATGGGGATTTGGGTGGACATGGAAAGGGCTATGGTAGCGGTGGTGGTGGAGGGAGTGGATATGGCGGTGGAGCTGATCATGGAGTTGGGTATGGTAGCGGCGGAGGTGGAGGATATGGAGCTGGAGGTGGAGCTGGATATGGTCCAGGAGGAGACCATGGTGTTGGCTATGGGAGTGGAGGAGGGGGTGGGTCAGGTGGTGGTTATGGTGGTGGAGCCAAAGGGTATGGTGGTGGTGCTAAAGGAAGTGGGTATGGGAGTGGCGGCGGCGCCGGAAGTGGCTACGGTGGTGTTGGTGGTGAAGAAGGAGGATATGATGGTGGATATTGA
Protein sequence
MAISKSLSLTFLLLLGLGLASAARTLLSYDPPHHSDVGYGYQHNPRVGYDHDHHDGPYGAYGGGSGGGYGAGAGSSLGGSGYGSGGGGGGGSGYAGVGDVGGSGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSGYGGGADHGVGYGSGGGGGYGAGGGAGYGPGGDHGVGYGSGGGGGSGGGYGGGAKGYGGGAKGSGYGSGGGAGSGYGGVGGEEGGYDGGY
Homology
BLAST of Csor.00g206290 vs. ExPASy Swiss-Prot
Match:
P10496 (Glycine-rich cell wall structural protein 1.8 OS=Phaseolus vulgaris OX=3885 PE=2 SV=1)
HSP 1 Score: 67.8 bits (164), Expect = 2.3e-10
Identity = 161/291 (55.33%), Postives = 176/291 (60.48%), Query Frame = 0
Query: 8 SLTFLLLLGLGLASAARTLLSYDPPHHSDVGYGYQHNPRVGYDHDHHDGPYGAYGGGSGG 67
SL FL+LL LG+ SA R LL+ D GYG H GY G G+YGGG GG
Sbjct: 9 SLVFLVLLALGVCSARRALLTL------DAGYGLGHGTGGGY-----GGAAGSYGGGGGG 68
Query: 68 GYGAGAG--SSLGGSGYGSGGGGGGGSGYAGVGDVGGSGYGSGG--GGGSGVGYGDLGGH 127
G G G G G GYG G GGG G G G G G+GYG GG GGG GV YG GG
Sbjct: 69 GSGGGGGYAGEHGVVGYGGGSGGGQGGG-VGYGGDQGAGYGGGGGSGGGGGVAYGG-GGE 128
Query: 128 GKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGS--GVGYGDLGGHGKGYGSGGG-GGSG 187
GYG G GGG+G GYG G HG GYG GGG G+ G GY G G GYG+GGG GG G
Sbjct: 129 RGGYGGGQGGGAGGGYGAGGEHGIGYGGGGGSGAGGGGGYNAGGAQGGGYGTGGGAGGGG 188
Query: 188 VGYGDL-GGHGKGYGSGGGGGSGYGGGADHGVGYGSGGGGGYGAGGGAGYGPGGDHGVGY 247
G GD GG+G G G+GGG G GYGGG +H G GGGGG G G G GYG GG+HG G
Sbjct: 189 GGGGDHGGGYGGGQGAGGGAGGGYGGGGEH----GGGGGGGQGGGAGGGYGAGGEHGGGA 248
Query: 248 GSGGGGGSGGGYGGGAKGYGGGAKGSGYGSGGGAGSGYGGVGGEEGGYDGG 291
G G GGG+GGGYG G + +GGGA G G GGGAG GY G GGE GG GG
Sbjct: 249 GGGQGGGAGGGYGAGGE-HGGGAGG---GQGGGAGGGY-GAGGEHGGGAGG 277
BLAST of Csor.00g206290 vs. NCBI nr
Match:
KAG6596726.1 (hypothetical protein SDJN03_09906, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 426 bits (1095), Expect = 7.91e-148
Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0
Query: 1 MAISKSLSLTFLLLLGLGLASAARTLLSYDPPHHSDVGYGYQHNPRVGYDHDHHDGPYGA 60
MAISKSLSLTFLLLLGLGLASAARTLLSYDPPHHSDVGYGYQHNPRVGYDHDHHDGPYGA
Sbjct: 1 MAISKSLSLTFLLLLGLGLASAARTLLSYDPPHHSDVGYGYQHNPRVGYDHDHHDGPYGA 60
Query: 61 YGGGSGGGYGAGAGSSLGGSGYGSGGGGGGGSGYAGVGDVGGSGYGSGGGGGSGVGYGDL 120
YGGGSGGGYGAGAGSSLGGSGYGSGGGGGGGSGYAGVGDVGGSGYGSGGGGGSGVGYGDL
Sbjct: 61 YGGGSGGGYGAGAGSSLGGSGYGSGGGGGGGSGYAGVGDVGGSGYGSGGGGGSGVGYGDL 120
Query: 121 GGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSG 180
GGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSG
Sbjct: 121 GGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSG 180
Query: 181 VGYGDLGGHGKGYGSGGGGGSGYGGGADHGVGYGSGGGGGYGAGGGAGYGPGGDHGVGYG 240
VGYGDLGGHGKGYGSGGGGGSGYGGGADHGVGYGSGGGGGYGAGGGAGYGPGGDHGVGYG
Sbjct: 181 VGYGDLGGHGKGYGSGGGGGSGYGGGADHGVGYGSGGGGGYGAGGGAGYGPGGDHGVGYG 240
Query: 241 SGGGGGSGGGYGGGAKGYGGGAKGSGYGSGGGAGSGYGGVGGEEGGYDGGY 291
SGGGGGSGGGYGGGAKGYGGGAKGSGYGSGGGAGSGYGGVGGEEGGYDGGY
Sbjct: 241 SGGGGGSGGGYGGGAKGYGGGAKGSGYGSGGGAGSGYGGVGGEEGGYDGGY 291
BLAST of Csor.00g206290 vs. NCBI nr
Match:
XP_022924241.1 (glycine-rich cell wall structural protein 1.8-like [Cucurbita moschata])
HSP 1 Score: 376 bits (965), Expect = 2.03e-128
Identity = 267/291 (91.75%), Postives = 267/291 (91.75%), Query Frame = 0
Query: 1 MAISKSLSLTFLLLLGLGLASAARTLLSYDPPHHSDVGYGYQHNPRVGYDHDHHDGPYGA 60
MAISKSLSLTFLLLLGLGLASAARTLLSYDPPHHSDVGYGYQHNPRVGYDHDHHDGPYGA
Sbjct: 1 MAISKSLSLTFLLLLGLGLASAARTLLSYDPPHHSDVGYGYQHNPRVGYDHDHHDGPYGA 60
Query: 61 YGGGSGGGYGAGAGSSLGGSGYGSGGGGGGGSGYAGVGDVGGSGYGSGGGGGSGVGYGDL 120
YGGGSGGGYGAGAGSSLGGSGYGSGGGGG SGYAGVGDVGGSGYGSGGGGGSGVGYGDL
Sbjct: 61 YGGGSGGGYGAGAGSSLGGSGYGSGGGGG--SGYAGVGDVGGSGYGSGGGGGSGVGYGDL 120
Query: 121 GGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSG 180
GGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSG
Sbjct: 121 GGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSG 180
Query: 181 VGYGDLGGHGKGYGSGGGGGSGYGGGADHGVGYGSGGGGGYGAGGGAGYGPGGDHGVGYG 240
YGGGADHGVGYGSGGGGGYGAGGGAGYGPGGDHGVGYG
Sbjct: 181 ----------------------YGGGADHGVGYGSGGGGGYGAGGGAGYGPGGDHGVGYG 240
Query: 241 SGGGGGSGGGYGGGAKGYGGGAKGSGYGSGGGAGSGYGGVGGEEGGYDGGY 291
SGGGGGSGGGYGGGAKGYGGGAKGSGYGSGGGAGSGYGGVGGEEGGYDGGY
Sbjct: 241 SGGGGGSGGGYGGGAKGYGGGAKGSGYGSGGGAGSGYGGVGGEEGGYDGGY 267
BLAST of Csor.00g206290 vs. NCBI nr
Match:
XP_023539508.1 (glycine-rich cell wall structural protein 1.8-like [Cucurbita pepo subsp. pepo] >XP_023539510.1 glycine-rich cell wall structural protein 1.8-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 330 bits (846), Expect = 1.21e-110
Identity = 243/291 (83.51%), Postives = 245/291 (84.19%), Query Frame = 0
Query: 1 MAISKSLSLTFLLLLGLGLASAARTLLSYDPPHHSDVGYGYQHNPRVGYDHDHHDGPYGA 60
MAISKSLSLTFLLLLGLGLASAARTLLSYDPPHHSDVGYGYQHNPRVGYDHDHHDGPYGA
Sbjct: 1 MAISKSLSLTFLLLLGLGLASAARTLLSYDPPHHSDVGYGYQHNPRVGYDHDHHDGPYGA 60
Query: 61 YGGGSGGGYGAGAGSSLGGSGYGSGGGGGGGSGYAGVGDVGGSGYGSGGGGGSGVGYGDL 120
YGGGSGGGYGAGAGS+LGGSGYGSGGGGGGGSGYAGVGD+GGSGYGSGGGGGSGVGYGDL
Sbjct: 61 YGGGSGGGYGAGAGSALGGSGYGSGGGGGGGSGYAGVGDLGGSGYGSGGGGGSGVGYGDL 120
Query: 121 GGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSG 180
GGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSG
Sbjct: 121 GGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSG---------------------- 180
Query: 181 VGYGDLGGHGKGYGSGGGGGSGYGGGADHGVGYGSGGGGGYGAGGGAGYGPGGDHGVGYG 240
YGGGADHGVGYGSGGGGGYGAGGGAGYGPGGD GVGYG
Sbjct: 181 ----------------------YGGGADHGVGYGSGGGGGYGAGGGAGYGPGGDRGVGYG 240
Query: 241 SGGGGGSGGGYGGGAKGYGGGAKGSGYGSGGGAGSGYGGVGGEEGGYDGGY 291
SGGGGGSGGGYGGGAKGYGGGAKGSGYGSGGGAGSGYGGVGGE GGYDGGY
Sbjct: 241 SGGGGGSGGGYGGGAKGYGGGAKGSGYGSGGGAGSGYGGVGGE-GGYDGGY 246
BLAST of Csor.00g206290 vs. NCBI nr
Match:
XP_023005512.1 (glycine-rich cell wall structural protein 1.8-like [Cucurbita maxima])
HSP 1 Score: 324 bits (830), Expect = 4.60e-108
Identity = 243/300 (81.00%), Postives = 245/300 (81.67%), Query Frame = 0
Query: 1 MAISKSLSLTFLLLLGLGLASAARTLLSYDPPHHSDVGYGYQHNPRVGYDHDHHDGPYGA 60
MAISKSLSLTFLLLLGLGLASAARTLLSYDPPHHSDVGYGYQHNPRVGYDHDHHDGPYGA
Sbjct: 1 MAISKSLSLTFLLLLGLGLASAARTLLSYDPPHHSDVGYGYQHNPRVGYDHDHHDGPYGA 60
Query: 61 YGGGSGGGYGAGAG--SSLGGSGYGSGGGGGGGSGYAGVGDVGGSGYGSGGGGGSGVGYG 120
YGGGSGGGYGAGAG S+LGGSGYGSGGGGGGGSGYAGVGD+GGSGYGSGGGGGSGVGYG
Sbjct: 61 YGGGSGGGYGAGAGAGSALGGSGYGSGGGGGGGSGYAGVGDLGGSGYGSGGGGGSGVGYG 120
Query: 121 DLGGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGG 180
DLGGHGKGYGSGGGGGSGVGYGDL GHGKGYGSGGGGGSG
Sbjct: 121 DLGGHGKGYGSGGGGGSGVGYGDLSGHGKGYGSGGGGGSG-------------------- 180
Query: 181 SGVGYGDLGGHGKGYGSGGGGGSGYGGGADHGVGYGSGGGGGYGAGGGAGYGPGGDHGVG 240
YGGGADHGVGYGSGGGGGYGAGGGAGYGPGGDHGVG
Sbjct: 181 ------------------------YGGGADHGVGYGSGGGGGYGAGGGAGYGPGGDHGVG 240
Query: 241 YGSGGGGGSGGGYGG-------GAKGYGGGAKGSGYGSGGGAGSGYGGVGGEEGGYDGGY 291
YGSGGGGGSGGGYGG G KGYGGGAKGSGYGSGGGAGSGYGGVGGEEGGYDGGY
Sbjct: 241 YGSGGGGGSGGGYGGRDKGYGGGPKGYGGGAKGSGYGSGGGAGSGYGGVGGEEGGYDGGY 256
BLAST of Csor.00g206290 vs. NCBI nr
Match:
XP_038905926.1 (glycine-rich cell wall structural protein 1.8-like [Benincasa hispida])
HSP 1 Score: 202 bits (515), Expect = 2.44e-60
Identity = 198/302 (65.56%), Postives = 210/302 (69.54%), Query Frame = 0
Query: 1 MAISKSLSLTFLLLLGLGLASAARTLLSYD-PPHHSDV-GYGYQ-HNPRVGYDHDHHDGP 60
MAI ++LS FLLL+GLGLASA R LLSYD PPH S Y + HNP+VGY+ DHHDGP
Sbjct: 9 MAILRTLSFGFLLLVGLGLASATRALLSYDIPPHRSGYDNYDHPVHNPKVGYERDHHDGP 68
Query: 61 YGAYGGGSGGGYGAGAGSSLGGSGYGSGGGGGGGSGYAGVGDVGGSGYGSGGGGGSGVGY 120
YG GG+GGGYG GAGSSLGGSGYGSGGGGG SGYAG GD
Sbjct: 69 YG---GGAGGGYGGGAGSSLGGSGYGSGGGGG--SGYAGAGD------------------ 128
Query: 121 GDLGGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGG 180
HG GYGSGGGGG G G G DLGG GYGSGGGG
Sbjct: 129 -----HGVGYGSGGGGGYGAGVGS---------------------DLGG--SGYGSGGGG 188
Query: 181 GSGVGYGDLGGHGKGYGSGGGGGSGYGGGADHGVGYGSGGGGGYGAGGGAGYGPGGDHGV 240
GSG GYGDLGGHGKGYGSGGGGGSGYGG DHGVGYGSGGGGGYG+GGGAGYGPG +HGV
Sbjct: 189 GSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGVGYGSGGGGGYGSGGGAGYGPGVEHGV 248
Query: 241 GYGSGGGGGSGGGYGGGAKGYGGGAKGSG--------YGSGGGAGSGYGGVGGEEGGYDG 291
GYGSGGGGGSG GYGG +KGYGGG+ G G +GSGGGAGSGYGG G EEGGYDG
Sbjct: 249 GYGSGGGGGSGSGYGG-SKGYGGGSGGGGGAGYGGGAHGSGGGAGSGYGGSG-EEGGYDG 257
BLAST of Csor.00g206290 vs. ExPASy TrEMBL
Match:
A0A6J1E911 (glycine-rich cell wall structural protein 1.8-like OS=Cucurbita moschata OX=3662 GN=LOC111431731 PE=4 SV=1)
HSP 1 Score: 376 bits (965), Expect = 9.85e-129
Identity = 267/291 (91.75%), Postives = 267/291 (91.75%), Query Frame = 0
Query: 1 MAISKSLSLTFLLLLGLGLASAARTLLSYDPPHHSDVGYGYQHNPRVGYDHDHHDGPYGA 60
MAISKSLSLTFLLLLGLGLASAARTLLSYDPPHHSDVGYGYQHNPRVGYDHDHHDGPYGA
Sbjct: 1 MAISKSLSLTFLLLLGLGLASAARTLLSYDPPHHSDVGYGYQHNPRVGYDHDHHDGPYGA 60
Query: 61 YGGGSGGGYGAGAGSSLGGSGYGSGGGGGGGSGYAGVGDVGGSGYGSGGGGGSGVGYGDL 120
YGGGSGGGYGAGAGSSLGGSGYGSGGGGG SGYAGVGDVGGSGYGSGGGGGSGVGYGDL
Sbjct: 61 YGGGSGGGYGAGAGSSLGGSGYGSGGGGG--SGYAGVGDVGGSGYGSGGGGGSGVGYGDL 120
Query: 121 GGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSG 180
GGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSG
Sbjct: 121 GGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSG 180
Query: 181 VGYGDLGGHGKGYGSGGGGGSGYGGGADHGVGYGSGGGGGYGAGGGAGYGPGGDHGVGYG 240
YGGGADHGVGYGSGGGGGYGAGGGAGYGPGGDHGVGYG
Sbjct: 181 ----------------------YGGGADHGVGYGSGGGGGYGAGGGAGYGPGGDHGVGYG 240
Query: 241 SGGGGGSGGGYGGGAKGYGGGAKGSGYGSGGGAGSGYGGVGGEEGGYDGGY 291
SGGGGGSGGGYGGGAKGYGGGAKGSGYGSGGGAGSGYGGVGGEEGGYDGGY
Sbjct: 241 SGGGGGSGGGYGGGAKGYGGGAKGSGYGSGGGAGSGYGGVGGEEGGYDGGY 267
BLAST of Csor.00g206290 vs. ExPASy TrEMBL
Match:
A0A6J1KTC0 (glycine-rich cell wall structural protein 1.8-like OS=Cucurbita maxima OX=3661 GN=LOC111498476 PE=4 SV=1)
HSP 1 Score: 324 bits (830), Expect = 2.23e-108
Identity = 243/300 (81.00%), Postives = 245/300 (81.67%), Query Frame = 0
Query: 1 MAISKSLSLTFLLLLGLGLASAARTLLSYDPPHHSDVGYGYQHNPRVGYDHDHHDGPYGA 60
MAISKSLSLTFLLLLGLGLASAARTLLSYDPPHHSDVGYGYQHNPRVGYDHDHHDGPYGA
Sbjct: 1 MAISKSLSLTFLLLLGLGLASAARTLLSYDPPHHSDVGYGYQHNPRVGYDHDHHDGPYGA 60
Query: 61 YGGGSGGGYGAGAG--SSLGGSGYGSGGGGGGGSGYAGVGDVGGSGYGSGGGGGSGVGYG 120
YGGGSGGGYGAGAG S+LGGSGYGSGGGGGGGSGYAGVGD+GGSGYGSGGGGGSGVGYG
Sbjct: 61 YGGGSGGGYGAGAGAGSALGGSGYGSGGGGGGGSGYAGVGDLGGSGYGSGGGGGSGVGYG 120
Query: 121 DLGGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGG 180
DLGGHGKGYGSGGGGGSGVGYGDL GHGKGYGSGGGGGSG
Sbjct: 121 DLGGHGKGYGSGGGGGSGVGYGDLSGHGKGYGSGGGGGSG-------------------- 180
Query: 181 SGVGYGDLGGHGKGYGSGGGGGSGYGGGADHGVGYGSGGGGGYGAGGGAGYGPGGDHGVG 240
YGGGADHGVGYGSGGGGGYGAGGGAGYGPGGDHGVG
Sbjct: 181 ------------------------YGGGADHGVGYGSGGGGGYGAGGGAGYGPGGDHGVG 240
Query: 241 YGSGGGGGSGGGYGG-------GAKGYGGGAKGSGYGSGGGAGSGYGGVGGEEGGYDGGY 291
YGSGGGGGSGGGYGG G KGYGGGAKGSGYGSGGGAGSGYGGVGGEEGGYDGGY
Sbjct: 241 YGSGGGGGSGGGYGGRDKGYGGGPKGYGGGAKGSGYGSGGGAGSGYGGVGGEEGGYDGGY 256
BLAST of Csor.00g206290 vs. ExPASy TrEMBL
Match:
A0A6J1CWP3 (glycine-rich cell wall structural protein 1.8-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014911 PE=4 SV=1)
HSP 1 Score: 188 bits (477), Expect = 4.79e-55
Identity = 193/308 (62.66%), Postives = 205/308 (66.56%), Query Frame = 0
Query: 1 MAISKSLSLTFLLLLGLGLASAARTLLSYDPPHHSDVGYGYQHNPRVGYDHDHHDGPYGA 60
MAISK+ SL+FLLLLG GLASAARTLL ++P ++ ++ RVGYD DHHDG A
Sbjct: 1 MAISKAFSLSFLLLLGFGLASAARTLLGHEPDAYNP------YDRRVGYDRDHHDG---A 60
Query: 61 YGGGSGGGYGAGAGSSLGGSGYGSGGGGGGGSGYAGVGDVGGSGYGSGGGGGSGVGYGDL 120
YGGGSGGGYGAGAGSSLGGSGYGSGGGGGGGSGY G GD
Sbjct: 61 YGGGSGGGYGAGAGSSLGGSGYGSGGGGGGGSGYGGAGD--------------------- 120
Query: 121 GGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSG 180
HG GYGSGGGGG G G G SG+G G GYGSGGGGGSG
Sbjct: 121 --HGVGYGSGGGGGYGGGMG----------------SGLG-------GAGYGSGGGGGSG 180
Query: 181 VGYGDLGGHGKGYGSGGGGGSGYGGGADHGVGYGSGGGGGYGAGGG--AGYGPGGDHGVG 240
GYGD GG GKGYGSGGGGGSGYGGG DHG GYGSGGGGGYG+GGG AGYGPG +HGVG
Sbjct: 181 GGYGDAGGRGKGYGSGGGGGSGYGGGGDHGAGYGSGGGGGYGSGGGGGAGYGPG-EHGVG 240
Query: 241 YGSGGGGGSGGGYGGGAKGYGGG---------------AKGSGYGSGGGAGSGYGGVGGE 291
YGSGGGGGSGGGYGG GYGGG A G GYG GGG+G GYG G E
Sbjct: 241 YGSGGGGGSGGGYGGSKGGYGGGSGGGKGGGGGYGAGGAHGGGYGGGGGSGGGYGSSG-E 251
BLAST of Csor.00g206290 vs. ExPASy TrEMBL
Match:
A0A1S3BJM7 (glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC103490774 PE=4 SV=1)
HSP 1 Score: 184 bits (467), Expect = 2.17e-53
Identity = 195/317 (61.51%), Postives = 206/317 (64.98%), Query Frame = 0
Query: 1 MAISKSLSLTFLLLLGLGLASAARTLLSYD-PPHHSDVGYGYQH----NPRVGYDHDHHD 60
MAISK+LS FLLL+ LGLASAAR+LL YD PPH S Y + NP+VGY+HDHHD
Sbjct: 1 MAISKTLSFGFLLLVSLGLASAARSLLYYDMPPHRSGYDNNYDNHPVVNPKVGYEHDHHD 60
Query: 61 GPY-------GAYGGGSGGGYGAG--AGSSLGGSGYGSGGGGGGGSGYAGVGDVGGSGYG 120
G Y YGGG+GGGYGAG AGSSLGGSGYGSGGGGG SGY GVG+
Sbjct: 61 GYYHDRDHHDAPYGGGAGGGYGAGGGAGSSLGGSGYGSGGGGG--SGYGGVGN------- 120
Query: 121 SGGGGGSGVGYGDLGGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSGVGYGDLGG 180
HG GYGSGGGGG G G G DLGG
Sbjct: 121 ----------------HGVGYGSGGGGGYGAGVGS---------------------DLGG 180
Query: 181 HGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSGYGGGADHGVGYGSGGGGGYGAG-G 240
GYGSGGGGGSG GYGDLGGHGKGYGSGGGGGSGYGG DHGVGYGSGGGGGYG+G G
Sbjct: 181 --SGYGSGGGGGSGGGYGDLGGHGKGYGSGGGGGSGYGGRGDHGVGYGSGGGGGYGSGVG 240
Query: 241 GAGYGPGGDHGVGYGSGGGGGSGGGYGG-----------GAKGYGGGAKGSGYGSGGGAG 291
GAG DHGVGYGSGGGGG+GGGYGG G GYGGGA GSGYGSGGGAG
Sbjct: 241 GAGV----DHGVGYGSGGGGGAGGGYGGSKGYGAGSGGGGGAGYGGGAHGSGYGSGGGAG 261
BLAST of Csor.00g206290 vs. ExPASy TrEMBL
Match:
A0A0A0L1U7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G009540 PE=4 SV=1)
HSP 1 Score: 169 bits (429), Expect = 1.00e-47
Identity = 194/319 (60.82%), Postives = 203/319 (63.64%), Query Frame = 0
Query: 1 MAISKSLSLTFLLLLGLGLASAARTLLSYD-PPHHSDVGY-GYQH---NPRVGYDHD--- 60
MAISK+LS FLLL+ LGLASAAR+LLSYD PPH S GY Y H NP+VGY+HD
Sbjct: 1 MAISKTLSFGFLLLVSLGLASAARSLLSYDIPPHRS--GYDNYDHPVVNPKVGYEHDRRD 60
Query: 61 -------HHDGPYGAYGGGSGGGYGAGAG--SSLGGSGYGSGGGGGGGSGYAGVGDVGGS 120
HHD PYG GG+GGGYGAGAG SSLGGSGYGSGGGGG SGY GVG+
Sbjct: 61 GYYHDRDHHDAPYG---GGAGGGYGAGAGAGSSLGGSGYGSGGGGG--SGYGGVGN---- 120
Query: 121 GYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSGVGYGD 180
H GYGSGGGGG G G G D
Sbjct: 121 -------------------HEVGYGSGGGGGYGAGVGS---------------------D 180
Query: 181 LGGHGKGYGSGGGGGSGVGYGDLGGHGKGYGSGGGGGSGYGGGADHGVGYGSGGGGGYGA 240
LGG GYGSGGGGGSG GYGDLGG GKGYGSGGGGGSGYGG DHGVGYGSGGGGGYG+
Sbjct: 181 LGG--SGYGSGGGGGSGGGYGDLGGRGKGYGSGGGGGSGYGGRGDHGVGYGSGGGGGYGS 240
Query: 241 GGGAGYGPGGDHGVGYGSGGGGGSGGGYGG-----------GAKGYGGGAKGSGYGSGGG 291
G G G G DHGVGYGSGGGGG+G GYGG G GYGGGA GSGYGSGGG
Sbjct: 241 GVGGGAGVV-DHGVGYGSGGGGGAGSGYGGSKGYGGGSGGGGGAGYGGGAHGSGYGSGGG 259
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P10496 | 2.3e-10 | 55.33 | Glycine-rich cell wall structural protein 1.8 OS=Phaseolus vulgaris OX=3885 PE=2... | [more] |
Match Name | E-value | Identity | Description | |
KAG6596726.1 | 7.91e-148 | 100.00 | hypothetical protein SDJN03_09906, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022924241.1 | 2.03e-128 | 91.75 | glycine-rich cell wall structural protein 1.8-like [Cucurbita moschata] | [more] |
XP_023539508.1 | 1.21e-110 | 83.51 | glycine-rich cell wall structural protein 1.8-like [Cucurbita pepo subsp. pepo] ... | [more] |
XP_023005512.1 | 4.60e-108 | 81.00 | glycine-rich cell wall structural protein 1.8-like [Cucurbita maxima] | [more] |
XP_038905926.1 | 2.44e-60 | 65.56 | glycine-rich cell wall structural protein 1.8-like [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1E911 | 9.85e-129 | 91.75 | glycine-rich cell wall structural protein 1.8-like OS=Cucurbita moschata OX=3662... | [more] |
A0A6J1KTC0 | 2.23e-108 | 81.00 | glycine-rich cell wall structural protein 1.8-like OS=Cucurbita maxima OX=3661 G... | [more] |
A0A6J1CWP3 | 4.79e-55 | 62.66 | glycine-rich cell wall structural protein 1.8-like isoform X1 OS=Momordica chara... | [more] |
A0A1S3BJM7 | 2.17e-53 | 61.51 | glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC1... | [more] |
A0A0A0L1U7 | 1.00e-47 | 60.82 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G009540 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |