Csor.00g206130 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g206130
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptionmitochondrial import inner membrane translocase subunit TIM22-2-like
LocationCsor_Chr06: 3404322 .. 3407702 (+)
RNA-Seq ExpressionCsor.00g206130
SyntenyCsor.00g206130
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGATTCTTCAAGGGACGAGTCATCTGACGCTGAGTTCGAAACCAATCCTTCAGACAGCCCTAATTCCTCCGACGCCATAGTTCCCTCCTCTTTTGGTGGCCCTGCTCTTTGTCTTTTCCGGTTTGCCGGCGACTCCGCTGCCGGAGCCTTCATGGGCTCCATTTTCGGCTACGGTCTCTTTCTTTCTCTTTGTGTTAAGAATGTCTCCTTTGTTTTTCGTTTTACATGTTTGATTGCTGGTTTAGTTTTTGAAATTGGGATTAGCTATGAGAATAAACGAGTTAGTAACCATTGATAGCTAATGCGGTTTAGTATTCTGCTTTAACAGACTAATTATAGCAATAGATGGAGAACAAACGCCTAATTTGCTTAACATAGGAAGCCAAGCTGAAGCAGCAAGGGTTTAGTAATCATATTAGCAAGTTGAAACTGGCTCCAAACTGGAAGGAGCTTAATAAAATCATTCAAAGTAAGAGCATTAAAACAGGACGAGATCAAGGTAAGTTAAGATCACCTAGTAGTATCAGTATGCGTACGATTGGACTTCCAAGAAACCATGGAATTCCAATCATTGGATTGCAAGACTAGAGTCAATCAACATCCACAAAAGCTTTTATGAACAACCATTAGATGAGTTGTGAGTGGACGAGCAGCAATACAATGAACAGGGGAAGATATATTTGGCACAAATGTGTGCATATGGTTGTTAACTAGAGAATAATGAATTGAAGAATCATCAACACTTAGGATCATCGTTGGGTACATCGAACTTCAAATTTTTATTACTAGGTATAAAAATTGGGTTAGAGCTGCCGGACGAAGCATAACTCAATTGTTTAAGGCATATATTGTTTGCTAATAAGTCATAGGTTTGAAGCGTTGAGACACTAAGGAAAAACAAAAGGGAAAAAAATTGACTTAAGTTGAAGAAGCCAATATTCTCCAATAGTTGCAAACAGTAGTTTCCTCAAAGAAAGGAAGATGTGACGAGTCTTAAACAACTCCGAGCTGAGAAAATAACCGAAAAAACCAATATCTTTAAGCTGAAACTAACTATGGAGCAAAATTTTAACCATATAATAGTATCTTGACGAGGACCGCTTACGGTAATATCATCGGTGTACACCGACAATGCTACATAGGAGCAAACTGAACCATGAGTAAGCAAGGACTAATTGGCCGTGGACTAATAAAAAACAAGGGAAGGGAGTACATCAGAAAGAGGCGTATATACCTCCTCAAACATGACTAACTTGGAGTTGTCCAGGTTTCTTCAACGAAATTGATTGGAAAACGTGTTCAGGAAGTGCAACAAGCATGTTTAGAATGGTTCTCTAAGATTGAAAAAGTGTTATAGAATACCTGATATGGCTATTTTGCACAAGAATCAATTATCGATGTACTAATCAAGTCTCATTTAGAAACACAGTTAAAAATATGATCTGCTATATGAGATATAGAAGAACTAACCATATCTTCATTATTGAAGGAAGATAATGATAGATGAGTCTGAAACGGGTGAGTTCCAGTTTATCGAATAGGAAATATGAGTAAATTGGGGAAGATTTGCGAGCTTCCTTCTCTCCCGAGACTCACCCTAGTCCAATACTACCAAAAAAAATGTACTAATGGTGTTTCCTACTCCTAATATGTCAGCTGTCTAACTAACTCACATTCCATGGGACTCGCACTACATTATGCATAATACTAGTCAGTAGGGCCACCCCTCACTTCATTACTGAAAAACATTTTCAGAATTGGGGTCTATCAGAAACATACTTATTAGCTGATGATCTTGACTAAGAGTAAGACAACAAAAAAACACAAGCTCTGGATTCTTTTCAGGAGCCATCCCGATCACATGATTAGTGTAAACCTTCTAAGTATTTAGTAGATTAGGTGAATAAGAATTTTGTTTATGGTTATCACCTGATAGATAATGTGAATCTTGTTACAACGGTCTACTTGAAAACCTTTGATCCCATAATTTGTACAAATCAGTCTTCTTTCTTAGGTGGTTTATCAAAATTAGAAGGTTGCTGTTTCTTAATAATCTAAAAATTAAGAAAGCAAGGGGCTCTAAATTGATCGTTTAACGAACAACTTGTTGTTGCTTCTCTCGTGTAACCAGCAAAAAAGCCTTATTTGTTGGCAGTCCGATTGTTAGCATAGGTATCATTGAATCATAAGAAAAATTATGATACCAATTTTTATTTTCAGTTTTTCTAGTTAGCCATGTACTAATAAAATTTAATGCATTCTGAGTATCCTTTAGGTTCGGGATTGATTAAGAAGAAGGGCTTCAAAGGATCATTTGCAGAGGCTGGATCTTGTGCCAAGGTGTGATTATTGAAAAAGAATACTGGAGCGTTTCACAATGAATAAATTTCATTACTGGTTACTGCTCTTTGAGGCTTTTTAAGGACTAATTTTGTTCGCTAATCTTTTGTTAATTTCAATTTATGAATCAGACATTTGCAGTTTTGTCTGGGGTGCACAGTTTGGTTGTTTGCATGTTAAAGAGATTGAGAGGAAAGGATGATGGTGTGGTAACTTCGCTTCGGAAATATTAGTATTTGGCTGTTTCGATCCCCTTTCTAATGATGTTACCTCATTTTTGTAGTTATTAATGCTGGGGTAGCCGGATGCTGCACTGGTTTAGCTCTAAGTTTTCCAGGTAGTAACCTTTTCGACTGGCATCTCACTTCATTCCGTGATTACGTTTTTGGTGGCATCTGGCCTCTTTGTATGTTTTAATTCCATTCGAACACGTAAAGAAGTAGATAACAACTTATATGCCTCAGTTTCCACCATGGTAGCTCGTTGGCTCGAGCAACTCTTCAATTAATTCATTACGACTTGATTGACATTGTGTTACTCTGAATATTGCTTTGAGTTAAAGAAGTTGAGTGTGAGTCTCACATTGGTTGGAGAGGGGAACGAAGCATTCCTTATAAGGACATGGAAACCTCCTTCTAGTGGACGCATTTTAAAACCTTGAAGGGAAGTCCGAAAGAGAAAGTCCAAAGAAGACAATATTTGCTAGGAGTTGACTTGGGCTGGGCTGTTACAGTGAGACATACATTACTGCTCCTTTGAACTTCTGTATGTAAATAGAGGCTTTTGTTTCACAGGCGCTCCACAGGCTCTTCTTCAGAGTTGCATCACTTTTGGAGCGTTTTCGTTTATACTCGAGGGCCTTAACAAGCAGCAGCCAGCGTTGGCTCATCCCGCTTTCTCGAGAAAGAGACGTAATATGGAGAGAAATCATCCTCCCTTAGTTTTGCCGCTTCAATTTGCGCTTCCAGCTGAACTTAAAGGTGCATTTTCTGCATTCTGCAAGTCCTTGGAGAAGAGCAGGAGGAGCAGCTGGTAA

mRNA sequence

ATGGCGGATTCTTCAAGGGACGAGTCATCTGACGCTGAGTTCGAAACCAATCCTTCAGACAGCCCTAATTCCTCCGACGCCATAGTTCCCTCCTCTTTTGGTGGCCCTGCTCTTTGTCTTTTCCGGTTTGCCGGCGACTCCGCTGCCGGAGCCTTCATGGGCTCCATTTTCGGCTACGGTTCGGGATTGATTAAGAAGAAGGGCTTCAAAGGATCATTTGCAGAGGCTGGATCTTGTGCCAAGACATTTGCAGTTTTGTCTGGGGTGCACAGTTTGGTTGTTTGCATGTTAAAGAGATTGAGAGGAAAGGATGATGTTATTAATGCTGGGGTAGCCGGATGCTGCACTGGTTTAGCTCTAAGTTTTCCAGGCGCTCCACAGGCTCTTCTTCAGAGTTGCATCACTTTTGGAGCGTTTTCGTTTATACTCGAGGGCCTTAACAAGCAGCAGCCAGCGTTGGCTCATCCCGCTTTCTCGAGAAAGAGACGTAATATGGAGAGAAATCATCCTCCCTTAGTTTTGCCGCTTCAATTTGCGCTTCCAGCTGAACTTAAAGGTGCATTTTCTGCATTCTGCAAGTCCTTGGAGAAGAGCAGGAGGAGCAGCTGGTAA

Coding sequence (CDS)

ATGGCGGATTCTTCAAGGGACGAGTCATCTGACGCTGAGTTCGAAACCAATCCTTCAGACAGCCCTAATTCCTCCGACGCCATAGTTCCCTCCTCTTTTGGTGGCCCTGCTCTTTGTCTTTTCCGGTTTGCCGGCGACTCCGCTGCCGGAGCCTTCATGGGCTCCATTTTCGGCTACGGTTCGGGATTGATTAAGAAGAAGGGCTTCAAAGGATCATTTGCAGAGGCTGGATCTTGTGCCAAGACATTTGCAGTTTTGTCTGGGGTGCACAGTTTGGTTGTTTGCATGTTAAAGAGATTGAGAGGAAAGGATGATGTTATTAATGCTGGGGTAGCCGGATGCTGCACTGGTTTAGCTCTAAGTTTTCCAGGCGCTCCACAGGCTCTTCTTCAGAGTTGCATCACTTTTGGAGCGTTTTCGTTTATACTCGAGGGCCTTAACAAGCAGCAGCCAGCGTTGGCTCATCCCGCTTTCTCGAGAAAGAGACGTAATATGGAGAGAAATCATCCTCCCTTAGTTTTGCCGCTTCAATTTGCGCTTCCAGCTGAACTTAAAGGTGCATTTTCTGCATTCTGCAAGTCCTTGGAGAAGAGCAGGAGGAGCAGCTGGTAA

Protein sequence

MADSSRDESSDAEFETNPSDSPNSSDAIVPSSFGGPALCLFRFAGDSAAGAFMGSIFGYGSGLIKKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLALSFPGAPQALLQSCITFGAFSFILEGLNKQQPALAHPAFSRKRRNMERNHPPLVLPLQFALPAELKGAFSAFCKSLEKSRRSSW
Homology
BLAST of Csor.00g206130 vs. ExPASy Swiss-Prot
Match: Q94EH2 (Chloroplastic import inner membrane translocase subunit TIM22-2 OS=Arabidopsis thaliana OX=3702 GN=TIM22-2 PE=1 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 4.8e-63
Identity = 130/199 (65.33%), Postives = 154/199 (77.39%), Query Frame = 0

Query: 3   DSSRDESSDAEFETNPSDSPNSSDAIVPSSFGGPALCLFRFAGDSAAGAFMGSIFGYGSG 62
           D + D  S+   + + +   +SS A+V  +   PA+CLFRFAGD+A GA MGSIFGYGSG
Sbjct: 13  DGNLDSDSNLNTDGDEATDNDSSKALV--TIPAPAVCLFRFAGDAAGGAVMGSIFGYGSG 72

Query: 63  LIKKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLALSF 122
           L KKKGFKGSFA+AG  AKTFAVLSGVHSLVVC+LK++RGKDD IN GVAGCCTGLALSF
Sbjct: 73  LFKKKGFKGSFADAGQSAKTFAVLSGVHSLVVCLLKQIRGKDDAINVGVAGCCTGLALSF 132

Query: 123 PGAPQALLQSCITFGAFSFILEGLNKQQPALAHPAFSRKRRNM-ERNHPPLVLPLQFALP 182
           PGAPQALLQSC+TFGAFSFILEGLNK+Q ALAH    R +  + + +H  L L L   +P
Sbjct: 133 PGAPQALLQSCLTFGAFSFILEGLNKRQTALAHSVSLRHQTGLFQDHHRALPLSLALPIP 192

Query: 183 AELKGAFSAFCKSLEKSRR 201
            E+KGAFS+FCKSL K R+
Sbjct: 193 EEIKGAFSSFCKSLAKPRK 209

BLAST of Csor.00g206130 vs. ExPASy Swiss-Prot
Match: Q6NKU9 (Mitochondrial import inner membrane translocase subunit TIM22-3 OS=Arabidopsis thaliana OX=3702 GN=TIM22-3 PE=2 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 2.2e-60
Identity = 127/199 (63.82%), Postives = 152/199 (76.38%), Query Frame = 0

Query: 3   DSSRDESSDAEFETNP-SDSPNSSDAIVPSSFGGPALCLFRFAGDSAAGAFMGSIFGYGS 62
           D+S D  S    + N  +D  +SS A+V      PA+CL RFAGD+A+GAFMGS+FGYGS
Sbjct: 13  DTSLDSDSKPNRDANDMTDHDSSSKALV---IPAPAVCLVRFAGDAASGAFMGSVFGYGS 72

Query: 63  GLIKKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLALS 122
           GL KKKGFKGSF +AG  AKTFAVLSGVHSLVVC+LK++RGKDD IN GVAGCCTGLALS
Sbjct: 73  GLFKKKGFKGSFVDAGQSAKTFAVLSGVHSLVVCLLKQIRGKDDAINVGVAGCCTGLALS 132

Query: 123 FPGAPQALLQSCITFGAFSFILEGLNKQQPALAHPAFSRKRRNMERNHPPLVLPLQFALP 182
           FPGAPQA+LQSC+TFGAFSFILEGLNK+Q ALAH    R++    ++  PL L L   + 
Sbjct: 133 FPGAPQAMLQSCLTFGAFSFILEGLNKRQTALAHSVSFRQQTRSPQHDLPL-LSLAIPIH 192

Query: 183 AELKGAFSAFCKSLEKSRR 201
            E+KGAFS+FC SL K ++
Sbjct: 193 DEIKGAFSSFCNSLTKPKK 207

BLAST of Csor.00g206130 vs. ExPASy Swiss-Prot
Match: A2RVP7 (Mitochondrial import inner membrane translocase subunit TIM22-1 OS=Arabidopsis thaliana OX=3702 GN=TIM22-1 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.7e-07
Identity = 28/67 (41.79%), Postives = 40/67 (59.70%), Query Frame = 0

Query: 78  SCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLALSFPGAPQALLQSCITFG 137
           SC KTFAV+  V S   C++++ R K D +N  +AGC TG ++S  G P+A    C  F 
Sbjct: 101 SC-KTFAVMGLVFSAAECIVEKARAKHDTVNTAIAGCVTGGSMSARGGPKAACIGCAGFA 160

Query: 138 AFSFILE 145
            FS ++E
Sbjct: 161 TFSVLIE 166

BLAST of Csor.00g206130 vs. ExPASy Swiss-Prot
Match: A1XJK0 (Mitochondrial import inner membrane translocase subunit TIM22-4 OS=Arabidopsis thaliana OX=3702 GN=TIM22-4 PE=2 SV=3)

HSP 1 Score: 57.4 bits (137), Expect = 2.2e-07
Identity = 28/67 (41.79%), Postives = 40/67 (59.70%), Query Frame = 0

Query: 78  SCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLALSFPGAPQALLQSCITFG 137
           SC KTFAV+  V S   C++++ R K D +N  +AGC TG ++S  G P+A    C  F 
Sbjct: 70  SC-KTFAVMGLVFSAAECIVEKARAKHDTVNTAIAGCVTGGSMSARGGPKAACIGCAGFA 129

Query: 138 AFSFILE 145
            FS ++E
Sbjct: 130 IFSVLIE 135

BLAST of Csor.00g206130 vs. ExPASy Swiss-Prot
Match: Q6CRJ6 (Mitochondrial import inner membrane translocase subunit TIM22 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=TIM22 PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.2e-07
Identity = 31/83 (37.35%), Postives = 46/83 (55.42%), Query Frame = 0

Query: 66  KKGFKGSFAEAG----SCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLALS 125
           K+  K  F++ G    S AK F  +  ++S V C+++ LR K+D+ N   AGC TG  L+
Sbjct: 97  KQQIKIQFSDMGKRSYSSAKNFGYIGMIYSGVECVVESLRAKNDIYNGVAAGCLTGGGLA 156

Query: 126 FPGAPQALLQSCITFGAFSFILE 145
           +   PQA L  C  F AFS  ++
Sbjct: 157 YKSGPQAALVGCAGFAAFSTAID 179

BLAST of Csor.00g206130 vs. NCBI nr
Match: XP_022933227.1 (mitochondrial import inner membrane translocase subunit TIM22-2-like [Cucurbita moschata] >KAG6596742.1 Chloroplastic import inner membrane translocase subunit TIM22-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 400 bits (1027), Expect = 2.31e-140
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0

Query: 1   MADSSRDESSDAEFETNPSDSPNSSDAIVPSSFGGPALCLFRFAGDSAAGAFMGSIFGYG 60
           MADSSRDESSDAEFETNPSDSPNSSDAIVPSSFGGPALCLFRFAGDSAAGAFMGSIFGYG
Sbjct: 1   MADSSRDESSDAEFETNPSDSPNSSDAIVPSSFGGPALCLFRFAGDSAAGAFMGSIFGYG 60

Query: 61  SGLIKKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLAL 120
           SGLIKKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLAL
Sbjct: 61  SGLIKKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLAL 120

Query: 121 SFPGAPQALLQSCITFGAFSFILEGLNKQQPALAHPAFSRKRRNMERNHPPLVLPLQFAL 180
           SFPGAPQALLQSCITFGAFSFILEGLNKQQPALAHPAFSRKRRNMERNHPPLVLPLQFAL
Sbjct: 121 SFPGAPQALLQSCITFGAFSFILEGLNKQQPALAHPAFSRKRRNMERNHPPLVLPLQFAL 180

Query: 181 PAELKGAFSAFCKSLEKSRRSSW 203
           PAELKGAFSAFCKSLEKSRRSSW
Sbjct: 181 PAELKGAFSAFCKSLEKSRRSSW 203

BLAST of Csor.00g206130 vs. NCBI nr
Match: XP_023540528.1 (mitochondrial import inner membrane translocase subunit TIM22-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 392 bits (1006), Expect = 3.68e-137
Identity = 199/203 (98.03%), Postives = 200/203 (98.52%), Query Frame = 0

Query: 1   MADSSRDESSDAEFETNPSDSPNSSDAIVPSSFGGPALCLFRFAGDSAAGAFMGSIFGYG 60
           MADSS+DESSDAEFETNPSDSPNSSDAIVPSSFGGPALCLFRFAGDSAAGAFMGSIFGYG
Sbjct: 1   MADSSKDESSDAEFETNPSDSPNSSDAIVPSSFGGPALCLFRFAGDSAAGAFMGSIFGYG 60

Query: 61  SGLIKKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLAL 120
           SGLIKKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLAL
Sbjct: 61  SGLIKKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLAL 120

Query: 121 SFPGAPQALLQSCITFGAFSFILEGLNKQQPALAHPAFSRKRRNMERNHPPLVLPLQFAL 180
           SFPGAPQALLQSCITFGAFSFILEGLNKQQPALAHPAFSRKR NMERN PPLVLPLQFAL
Sbjct: 121 SFPGAPQALLQSCITFGAFSFILEGLNKQQPALAHPAFSRKRSNMERNRPPLVLPLQFAL 180

Query: 181 PAELKGAFSAFCKSLEKSRRSSW 203
           P ELKGAFSAFCKSLEKSRRSSW
Sbjct: 181 PVELKGAFSAFCKSLEKSRRSSW 203

BLAST of Csor.00g206130 vs. NCBI nr
Match: XP_023005553.1 (mitochondrial import inner membrane translocase subunit TIM22-2-like [Cucurbita maxima])

HSP 1 Score: 383 bits (983), Expect = 1.18e-133
Identity = 196/203 (96.55%), Postives = 197/203 (97.04%), Query Frame = 0

Query: 1   MADSSRDESSDAEFETNPSDSPNSSDAIVPSSFGGPALCLFRFAGDSAAGAFMGSIFGYG 60
           MADSSRDESSDAE ETN SDSPNSSDAIVPSSFGGPALCLFRFAGDSAAGAFMGSIFGYG
Sbjct: 1   MADSSRDESSDAELETNHSDSPNSSDAIVPSSFGGPALCLFRFAGDSAAGAFMGSIFGYG 60

Query: 61  SGLIKKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLAL 120
           SGLIKKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLAL
Sbjct: 61  SGLIKKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLAL 120

Query: 121 SFPGAPQALLQSCITFGAFSFILEGLNKQQPALAHPAFSRKRRNMERNHPPLVLPLQFAL 180
           SFPGAPQALLQSCITFGAFSFILEGLNKQQPALAHP FSRKR NMERN PPLVLPLQFA+
Sbjct: 121 SFPGAPQALLQSCITFGAFSFILEGLNKQQPALAHPDFSRKRSNMERNCPPLVLPLQFAI 180

Query: 181 PAELKGAFSAFCKSLEKSRRSSW 203
           P ELKGAFSAFCKSLEKSRRSSW
Sbjct: 181 PVELKGAFSAFCKSLEKSRRSSW 203

BLAST of Csor.00g206130 vs. NCBI nr
Match: XP_038904844.1 (chloroplastic import inner membrane translocase subunit TIM22-2-like [Benincasa hispida])

HSP 1 Score: 367 bits (943), Expect = 1.43e-127
Identity = 188/201 (93.53%), Postives = 191/201 (95.02%), Query Frame = 0

Query: 1   MADSSRDESSDAEFETNPSDSPNSSDAIVPSSFGGPALCLFRFAGDSAAGAFMGSIFGYG 60
           M DSS+D SSDA  ETNPSDSPNSSDAIVPSSF GPALCLFRFAGDSAAGAFMGSIFGYG
Sbjct: 1   MVDSSKDVSSDAGLETNPSDSPNSSDAIVPSSFNGPALCLFRFAGDSAAGAFMGSIFGYG 60

Query: 61  SGLIKKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLAL 120
           SGLIKKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLAL
Sbjct: 61  SGLIKKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLAL 120

Query: 121 SFPGAPQALLQSCITFGAFSFILEGLNKQQPALAHPAFSRKRRNMERNHPPLVLPLQFAL 180
           SFPGAPQALLQSCITFGAFSFILEGLNKQQPALAHP FSR R +MERN PPLVLPLQFAL
Sbjct: 121 SFPGAPQALLQSCITFGAFSFILEGLNKQQPALAHPIFSRTRSDMERNRPPLVLPLQFAL 180

Query: 181 PAELKGAFSAFCKSLEKSRRS 201
           P ELKGAFSAFCKSLEKSR+S
Sbjct: 181 PVELKGAFSAFCKSLEKSRKS 201

BLAST of Csor.00g206130 vs. NCBI nr
Match: XP_022158320.1 (mitochondrial import inner membrane translocase subunit TIM22-2-like [Momordica charantia])

HSP 1 Score: 364 bits (934), Expect = 3.36e-126
Identity = 184/201 (91.54%), Postives = 192/201 (95.52%), Query Frame = 0

Query: 1   MADSSRDESSDAEFETNPSDSPNSSDAIVPSSFGGPALCLFRFAGDSAAGAFMGSIFGYG 60
           MADSS+DESSDAE ETN  DSPNSSDA+VPSS GGPA+CLFRFAGDSAAGAFMGSIFGYG
Sbjct: 1   MADSSKDESSDAELETNNLDSPNSSDALVPSSLGGPAICLFRFAGDSAAGAFMGSIFGYG 60

Query: 61  SGLIKKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLAL 120
           SGL+KKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLAL
Sbjct: 61  SGLVKKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLAL 120

Query: 121 SFPGAPQALLQSCITFGAFSFILEGLNKQQPALAHPAFSRKRRNMERNHPPLVLPLQFAL 180
           SFPGAPQALLQSCITFGAFSFILEGLNKQQPA+AHP FSRK  ++ERN PPLVLPLQFAL
Sbjct: 121 SFPGAPQALLQSCITFGAFSFILEGLNKQQPAMAHPVFSRKISDIERNRPPLVLPLQFAL 180

Query: 181 PAELKGAFSAFCKSLEKSRRS 201
           P ELKGAFSAFCKSLEKSR+S
Sbjct: 181 PGELKGAFSAFCKSLEKSRKS 201

BLAST of Csor.00g206130 vs. ExPASy TrEMBL
Match: A0A6J1EZ67 (mitochondrial import inner membrane translocase subunit TIM22-2-like OS=Cucurbita moschata OX=3662 GN=LOC111440058 PE=4 SV=1)

HSP 1 Score: 400 bits (1027), Expect = 1.12e-140
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0

Query: 1   MADSSRDESSDAEFETNPSDSPNSSDAIVPSSFGGPALCLFRFAGDSAAGAFMGSIFGYG 60
           MADSSRDESSDAEFETNPSDSPNSSDAIVPSSFGGPALCLFRFAGDSAAGAFMGSIFGYG
Sbjct: 1   MADSSRDESSDAEFETNPSDSPNSSDAIVPSSFGGPALCLFRFAGDSAAGAFMGSIFGYG 60

Query: 61  SGLIKKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLAL 120
           SGLIKKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLAL
Sbjct: 61  SGLIKKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLAL 120

Query: 121 SFPGAPQALLQSCITFGAFSFILEGLNKQQPALAHPAFSRKRRNMERNHPPLVLPLQFAL 180
           SFPGAPQALLQSCITFGAFSFILEGLNKQQPALAHPAFSRKRRNMERNHPPLVLPLQFAL
Sbjct: 121 SFPGAPQALLQSCITFGAFSFILEGLNKQQPALAHPAFSRKRRNMERNHPPLVLPLQFAL 180

Query: 181 PAELKGAFSAFCKSLEKSRRSSW 203
           PAELKGAFSAFCKSLEKSRRSSW
Sbjct: 181 PAELKGAFSAFCKSLEKSRRSSW 203

BLAST of Csor.00g206130 vs. ExPASy TrEMBL
Match: A0A6J1L2H9 (mitochondrial import inner membrane translocase subunit TIM22-2-like OS=Cucurbita maxima OX=3661 GN=LOC111498505 PE=4 SV=1)

HSP 1 Score: 383 bits (983), Expect = 5.72e-134
Identity = 196/203 (96.55%), Postives = 197/203 (97.04%), Query Frame = 0

Query: 1   MADSSRDESSDAEFETNPSDSPNSSDAIVPSSFGGPALCLFRFAGDSAAGAFMGSIFGYG 60
           MADSSRDESSDAE ETN SDSPNSSDAIVPSSFGGPALCLFRFAGDSAAGAFMGSIFGYG
Sbjct: 1   MADSSRDESSDAELETNHSDSPNSSDAIVPSSFGGPALCLFRFAGDSAAGAFMGSIFGYG 60

Query: 61  SGLIKKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLAL 120
           SGLIKKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLAL
Sbjct: 61  SGLIKKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLAL 120

Query: 121 SFPGAPQALLQSCITFGAFSFILEGLNKQQPALAHPAFSRKRRNMERNHPPLVLPLQFAL 180
           SFPGAPQALLQSCITFGAFSFILEGLNKQQPALAHP FSRKR NMERN PPLVLPLQFA+
Sbjct: 121 SFPGAPQALLQSCITFGAFSFILEGLNKQQPALAHPDFSRKRSNMERNCPPLVLPLQFAI 180

Query: 181 PAELKGAFSAFCKSLEKSRRSSW 203
           P ELKGAFSAFCKSLEKSRRSSW
Sbjct: 181 PVELKGAFSAFCKSLEKSRRSSW 203

BLAST of Csor.00g206130 vs. ExPASy TrEMBL
Match: A0A6J1DVI3 (mitochondrial import inner membrane translocase subunit TIM22-2-like OS=Momordica charantia OX=3673 GN=LOC111024831 PE=4 SV=1)

HSP 1 Score: 364 bits (934), Expect = 1.63e-126
Identity = 184/201 (91.54%), Postives = 192/201 (95.52%), Query Frame = 0

Query: 1   MADSSRDESSDAEFETNPSDSPNSSDAIVPSSFGGPALCLFRFAGDSAAGAFMGSIFGYG 60
           MADSS+DESSDAE ETN  DSPNSSDA+VPSS GGPA+CLFRFAGDSAAGAFMGSIFGYG
Sbjct: 1   MADSSKDESSDAELETNNLDSPNSSDALVPSSLGGPAICLFRFAGDSAAGAFMGSIFGYG 60

Query: 61  SGLIKKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLAL 120
           SGL+KKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLAL
Sbjct: 61  SGLVKKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLAL 120

Query: 121 SFPGAPQALLQSCITFGAFSFILEGLNKQQPALAHPAFSRKRRNMERNHPPLVLPLQFAL 180
           SFPGAPQALLQSCITFGAFSFILEGLNKQQPA+AHP FSRK  ++ERN PPLVLPLQFAL
Sbjct: 121 SFPGAPQALLQSCITFGAFSFILEGLNKQQPAMAHPVFSRKISDIERNRPPLVLPLQFAL 180

Query: 181 PAELKGAFSAFCKSLEKSRRS 201
           P ELKGAFSAFCKSLEKSR+S
Sbjct: 181 PGELKGAFSAFCKSLEKSRKS 201

BLAST of Csor.00g206130 vs. ExPASy TrEMBL
Match: A0A5D3BBY2 (Mitochondrial import inner membrane translocase subunit TIM22-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001810 PE=4 SV=1)

HSP 1 Score: 359 bits (921), Expect = 1.74e-124
Identity = 187/205 (91.22%), Postives = 193/205 (94.15%), Query Frame = 0

Query: 1   MADSSRDESSDAE-FETNPSDSPNSSDAIVPSS-FGGPALCLFRFAGDSAAGAFMGSIFG 60
           MADSS+D SSDA+  +TN SDSPNSSDAIVPS  F GPALCLFRFAGDSAAGAFMGS+FG
Sbjct: 1   MADSSKDVSSDADNLQTNSSDSPNSSDAIVPSPPFTGPALCLFRFAGDSAAGAFMGSVFG 60

Query: 61  YGSGLIKKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGL 120
           YGSGLIKKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGL
Sbjct: 61  YGSGLIKKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGL 120

Query: 121 ALSFPGAPQALLQSCITFGAFSFILEGLNKQQPALAHPAFSRKRRNMERNHPPLVLPLQF 180
           ALSFPGAPQALLQSCITFGAFSFILEGLNKQQPALAHP FSR R N+ERN PPLVLPLQF
Sbjct: 121 ALSFPGAPQALLQSCITFGAFSFILEGLNKQQPALAHPVFSRTRSNIERNCPPLVLPLQF 180

Query: 181 ALPAELKGAFSAFCKSLEKSRRSSW 203
           ALP ELKGAFSAFCKSLEKSR+SSW
Sbjct: 181 ALPVELKGAFSAFCKSLEKSRKSSW 205

BLAST of Csor.00g206130 vs. ExPASy TrEMBL
Match: A0A6J1HL07 (mitochondrial import inner membrane translocase subunit TIM22-2-like OS=Cucurbita maxima OX=3661 GN=LOC111465119 PE=4 SV=1)

HSP 1 Score: 356 bits (913), Expect = 2.59e-123
Identity = 181/203 (89.16%), Postives = 190/203 (93.60%), Query Frame = 0

Query: 1   MADSSRDESSDAEFETNPSDSPNSSDAIVPSSFGGPALCLFRFAGDSAAGAFMGSIFGYG 60
           MADSS+DESS+ E +TNPSDSPNSS A+V  SFGGPALC FRFAGDSAAGAFMGSIFGYG
Sbjct: 1   MADSSKDESSETELDTNPSDSPNSSAAVVSPSFGGPALCFFRFAGDSAAGAFMGSIFGYG 60

Query: 61  SGLIKKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLAL 120
           SGL KKKGFKGSFAEAGS AKTFAVLSGVHSLVVCMLKRLRGKDD+INAGVAGCCTGLAL
Sbjct: 61  SGLFKKKGFKGSFAEAGSSAKTFAVLSGVHSLVVCMLKRLRGKDDIINAGVAGCCTGLAL 120

Query: 121 SFPGAPQALLQSCITFGAFSFILEGLNKQQPALAHPAFSRKRRNMERNHPPLVLPLQFAL 180
           SFPGAPQALLQ+C+TFGAFSFILEGLNKQQPALAHP FSRKR +MERN PPLVLPLQ AL
Sbjct: 121 SFPGAPQALLQNCLTFGAFSFILEGLNKQQPALAHPVFSRKRSDMERNRPPLVLPLQIAL 180

Query: 181 PAELKGAFSAFCKSLEKSRRSSW 203
           PAELKGAFSAFCKSLEK RR+SW
Sbjct: 181 PAELKGAFSAFCKSLEK-RRASW 202

BLAST of Csor.00g206130 vs. TAIR 10
Match: AT4G26670.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 242.3 bits (617), Expect = 3.4e-64
Identity = 130/199 (65.33%), Postives = 154/199 (77.39%), Query Frame = 0

Query: 3   DSSRDESSDAEFETNPSDSPNSSDAIVPSSFGGPALCLFRFAGDSAAGAFMGSIFGYGSG 62
           D + D  S+   + + +   +SS A+V  +   PA+CLFRFAGD+A GA MGSIFGYGSG
Sbjct: 13  DGNLDSDSNLNTDGDEATDNDSSKALV--TIPAPAVCLFRFAGDAAGGAVMGSIFGYGSG 72

Query: 63  LIKKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLALSF 122
           L KKKGFKGSFA+AG  AKTFAVLSGVHSLVVC+LK++RGKDD IN GVAGCCTGLALSF
Sbjct: 73  LFKKKGFKGSFADAGQSAKTFAVLSGVHSLVVCLLKQIRGKDDAINVGVAGCCTGLALSF 132

Query: 123 PGAPQALLQSCITFGAFSFILEGLNKQQPALAHPAFSRKRRNM-ERNHPPLVLPLQFALP 182
           PGAPQALLQSC+TFGAFSFILEGLNK+Q ALAH    R +  + + +H  L L L   +P
Sbjct: 133 PGAPQALLQSCLTFGAFSFILEGLNKRQTALAHSVSLRHQTGLFQDHHRALPLSLALPIP 192

Query: 183 AELKGAFSAFCKSLEKSRR 201
            E+KGAFS+FCKSL K R+
Sbjct: 193 EEIKGAFSSFCKSLAKPRK 209

BLAST of Csor.00g206130 vs. TAIR 10
Match: AT5G55510.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 233.4 bits (594), Expect = 1.6e-61
Identity = 127/199 (63.82%), Postives = 152/199 (76.38%), Query Frame = 0

Query: 3   DSSRDESSDAEFETNP-SDSPNSSDAIVPSSFGGPALCLFRFAGDSAAGAFMGSIFGYGS 62
           D+S D  S    + N  +D  +SS A+V      PA+CL RFAGD+A+GAFMGS+FGYGS
Sbjct: 13  DTSLDSDSKPNRDANDMTDHDSSSKALV---IPAPAVCLVRFAGDAASGAFMGSVFGYGS 72

Query: 63  GLIKKKGFKGSFAEAGSCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLALS 122
           GL KKKGFKGSF +AG  AKTFAVLSGVHSLVVC+LK++RGKDD IN GVAGCCTGLALS
Sbjct: 73  GLFKKKGFKGSFVDAGQSAKTFAVLSGVHSLVVCLLKQIRGKDDAINVGVAGCCTGLALS 132

Query: 123 FPGAPQALLQSCITFGAFSFILEGLNKQQPALAHPAFSRKRRNMERNHPPLVLPLQFALP 182
           FPGAPQA+LQSC+TFGAFSFILEGLNK+Q ALAH    R++    ++  PL L L   + 
Sbjct: 133 FPGAPQAMLQSCLTFGAFSFILEGLNKRQTALAHSVSFRQQTRSPQHDLPL-LSLAIPIH 192

Query: 183 AELKGAFSAFCKSLEKSRR 201
            E+KGAFS+FC SL K ++
Sbjct: 193 DEIKGAFSSFCNSLTKPKK 207

BLAST of Csor.00g206130 vs. TAIR 10
Match: AT3G10110.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 57.8 bits (138), Expect = 1.2e-08
Identity = 28/67 (41.79%), Postives = 40/67 (59.70%), Query Frame = 0

Query: 78  SCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLALSFPGAPQALLQSCITFG 137
           SC KTFAV+  V S   C++++ R K D +N  +AGC TG ++S  G P+A    C  F 
Sbjct: 101 SC-KTFAVMGLVFSAAECIVEKARAKHDTVNTAIAGCVTGGSMSARGGPKAACIGCAGFA 160

Query: 138 AFSFILE 145
            FS ++E
Sbjct: 161 TFSVLIE 166

BLAST of Csor.00g206130 vs. TAIR 10
Match: AT1G18320.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 57.4 bits (137), Expect = 1.6e-08
Identity = 28/67 (41.79%), Postives = 40/67 (59.70%), Query Frame = 0

Query: 78  SCAKTFAVLSGVHSLVVCMLKRLRGKDDVINAGVAGCCTGLALSFPGAPQALLQSCITFG 137
           SC KTFAV+  V S   C++++ R K D +N  +AGC TG ++S  G P+A    C  F 
Sbjct: 70  SC-KTFAVMGLVFSAAECIVEKARAKHDTVNTAIAGCVTGGSMSARGGPKAACIGCAGFA 129

Query: 138 AFSFILE 145
            FS ++E
Sbjct: 130 IFSVLIE 135

BLAST of Csor.00g206130 vs. TAIR 10
Match: AT5G24650.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 45.1 bits (105), Expect = 8.0e-05
Identity = 38/131 (29.01%), Postives = 64/131 (48.85%), Query Frame = 0

Query: 50  GAFMGSIFGYGSGLIKKKG--------FKGSFAEAGS---CAKTFAVLSGVHSLVVCMLK 109
           GAF+G + G  S  + + G         K + A  G     A+ FA ++GV++ + C++K
Sbjct: 65  GAFIGGLMGTLSPEMPQAGIDPQAMASLKQTQALVGGPLVQARNFAAITGVNAGIACVMK 124

Query: 110 RLRGKDDVINAGVAGCCTGLALS-----FPGAPQALLQSCITFGAFS--FILEGLNKQQP 163
           R+RGK+D+ +A VA   +G+A S       G P   + +   F  F   F   G    +P
Sbjct: 125 RIRGKEDLESAVVAAFGSGVAYSLVSAGLQGQPMNAITTAAGFAVFQGVFFKLGERFSKP 184

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q94EH24.8e-6365.33Chloroplastic import inner membrane translocase subunit TIM22-2 OS=Arabidopsis t... [more]
Q6NKU92.2e-6063.82Mitochondrial import inner membrane translocase subunit TIM22-3 OS=Arabidopsis t... [more]
A2RVP71.7e-0741.79Mitochondrial import inner membrane translocase subunit TIM22-1 OS=Arabidopsis t... [more]
A1XJK02.2e-0741.79Mitochondrial import inner membrane translocase subunit TIM22-4 OS=Arabidopsis t... [more]
Q6CRJ62.2e-0737.35Mitochondrial import inner membrane translocase subunit TIM22 OS=Kluyveromyces l... [more]
Match NameE-valueIdentityDescription
XP_022933227.12.31e-140100.00mitochondrial import inner membrane translocase subunit TIM22-2-like [Cucurbita ... [more]
XP_023540528.13.68e-13798.03mitochondrial import inner membrane translocase subunit TIM22-2-like [Cucurbita ... [more]
XP_023005553.11.18e-13396.55mitochondrial import inner membrane translocase subunit TIM22-2-like [Cucurbita ... [more]
XP_038904844.11.43e-12793.53chloroplastic import inner membrane translocase subunit TIM22-2-like [Benincasa ... [more]
XP_022158320.13.36e-12691.54mitochondrial import inner membrane translocase subunit TIM22-2-like [Momordica ... [more]
Match NameE-valueIdentityDescription
A0A6J1EZ671.12e-140100.00mitochondrial import inner membrane translocase subunit TIM22-2-like OS=Cucurbit... [more]
A0A6J1L2H95.72e-13496.55mitochondrial import inner membrane translocase subunit TIM22-2-like OS=Cucurbit... [more]
A0A6J1DVI31.63e-12691.54mitochondrial import inner membrane translocase subunit TIM22-2-like OS=Momordic... [more]
A0A5D3BBY21.74e-12491.22Mitochondrial import inner membrane translocase subunit TIM22-2 OS=Cucumis melo ... [more]
A0A6J1HL072.59e-12389.16mitochondrial import inner membrane translocase subunit TIM22-2-like OS=Cucurbit... [more]
Match NameE-valueIdentityDescription
AT4G26670.13.4e-6465.33Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family... [more]
AT5G55510.11.6e-6163.82Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family... [more]
AT3G10110.11.2e-0841.79Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family... [more]
AT1G18320.11.6e-0841.79Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family... [more]
AT5G24650.18.0e-0529.01Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF02466Tim17coord: 39..140
e-value: 2.2E-14
score: 53.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availablePANTHERPTHR14110:SF1CHLOROPLASTIC IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22-2-RELATEDcoord: 9..184
IPR039175Mitochondrial import inner membrane translocase subunit TIM22PANTHERPTHR14110MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22coord: 9..184

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g206130.m01Csor.00g206130.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045039 protein insertion into mitochondrial inner membrane
biological_process GO:0045036 protein targeting to chloroplast
biological_process GO:0071806 protein transmembrane transport
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0042721 TIM22 mitochondrial import inner membrane insertion complex
molecular_function GO:0008320 protein transmembrane transporter activity