Csor.00g206020 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g206020
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	DNA-directed RNA polymerases I and III subunit RPAC1
Location	Csor_Chr06: 3452944 .. 3464233 (+)
RNA-Seq Expression	Csor.00g206020
Synteny	Csor.00g206020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCTCTGTCAAAGCCATCGATCCTCTGCCTTCCACATTCTTGCACCCATCGTCAAGAATTCCAGAGGGGATCTCTGAGGTAAATCAAGTTCTATCCCTATTCATTTTCCAGATTCGAACTCTTTCAAGTTTTCTTTCTTGTTAATTCGATTCGATTTGATTCGATTCGATTTAGGTTTATCGAGCTAGGGTTTTCTCTGATTTGTGTGACTGCTTTTTCGTTCTTGTTTTACGAATCTAAAGAACCGTTTTTCATTTTCTTTGGGTTTGAAGGGCCGAGGAGACGAGGAAAAAGTCTAGAGATGACTACTGCAGCTCGACCCACATGGGCACCGGCTAAAGGTGGAAATGAACAAGGTGGAACTCGAATTTTTGGCCCATCACAGAAATATTCCTCCAGAGATATCGCTTCTCATACGACCTTGAAGCCCAGGTGCGTGTATTTAAGAAATGTAATTGTTAGTTGTATATGGAAGATGGGGCTGAGGGTGCACTTACTATAGTTTGTTGATTGCGTTTGTTCATTAAATTTTCGCAATGTTGTGTTCTTTGTACAAAGTCTGTCGTTCTTGGTTGTGTTTAATCGTCTATGTGTTGCGACTTCTGAGGGATAATGATTGTACATCCATAAGGAACTCGTTGGGGTCTTTGTTTATGATGTGCACTGAGTTTTCTAGTGAGTGTAATGTTCTTAACTGGAATTCTGAGAACTAAATTGGTTTACGTGTGTCTTTTCAAGTGATTCCATCTTAGGGTAGTTGGTTTTAATGTGGGTGTGATCTGTTGAACAGAATTTTCATCCATTTTACTTGATCTTAGCCAAGGTTAACTTTTTTTTGGATCGTTGGATTCTGATGTTTCCACTTCTTGGATTATGTTAATGGCCCGTACCCACCAATTCTCAAGGAACTTTGCTTACTCTTAGGTTTAACTCCTGGAGACAACAAGGGTTTTTGTACATTAAAGTTTCACCTTATGGTTGAACTAAACTTTTGGGAGAGTCTCTCTAACGTCCCGAATCCTTACCTCTAGGATCATCGTGGGTGTTAAGCCAAGGTGAAACTTAGAATGATTTTAATTAATTGGCTTTCACTGCTGGTTATCCGCATTTATTTTTCTTTACTAAGCAGGGTAATGACCAATTTAATACATAGTATAATTCCTCCAACTCTGTAGATGAATTTCTATTGGTATGAACGAAATTATAGAAGGGGATTTAAGGGAGTTACAAAAAAAAAAAAAAAAAAAAACGTTTTCATTGGTGTGTATGGAATTTAAAAGAAAGAGTTGAAGATAAGATTTGACTTAGTATTCCATGAGGAGTTTGAAGGGACAATTGAATCCAAGATTTGAGAAATGGTTCTTTTTTTGAAGTTATAGATTCTTCTTTTACGTTCCAACCAAATATGTCATAGACTTCCAGGATAAATGTCAGCATTCAGTCATAGAATTTCTCTTTAGTGATCATATAGAAAATTGATGAACATTTAATGAATCAAGTGAGAAAAGGGAAAATTGAATTGGAAAAGGTTGAAGATGAAGCCCCCAAAGCTTGACCATGTATTCCACCACTATTCTTGCAAAAACAGCTATAGCTGGAGCTGCTGGAATTGAAGTTGGCAGAGTCATTGGAGTGTCTCTTTTGGGATCTTGTTATTTTGGCTTAAACCTCCAAGCCGAAGGCGCTGTTTACCGTCCAGGAAGGAAGGACTTCCATAACATTATACTAAGGGCAAGGAGGAGCTCTGGTTTGCCCTCAGTGAGATGATCGAAGAAAGATTTAATTTTTTTCCCTCCACAAACTTTGCAATAAATTACATTCTTGCCTATCACTTCTATCTAACCATTTAATGAATCCTTCACAAACGTCATGAACAGCTTTAAAGTCTCTATATTGGAGAAGAGACTGCCATCAAAAAGCTCACACAATCGTAGTTAATCTGTACTTTAACCTATTATTACAAATGAGACATATCAGCCATGTCTCAAAATGAGAATTGACTAATCTATTTATAATGGCTATTTTTCTTTGTTTTATGTTTCCTTGGATATGGTGTCGTTACTTTTCTTCCATGATTTTAAGTCTCTAATCACTTGTCATTAATGATGCATGTAGGAAGGAAGGACAAGATACCCATGATGAATTGCAAAGGAGGAATCTCAGGGACGAGTTAGAAGATCGTGAAAGGAGGCATTTTTCATCAAAGAATAAATCATATGGTAAAGACATCCATTCTTTAGAAAAATATAGAATAATTTTTTTTGTTTGTTTTCGTATCATTTCTTATGGTTTTGTTCAAATATCCTTTTTCCATACTGTTGTATGACATGTTTGCAACGAGTTGATCATGTTTCACTTGCATAATTTGCAGATGATAGAGATCATAGAAAAGGAAGCCAACTTCTGTTAGAAGGTTAATTCATCAGTTTCTGTATGCTTACATTTAATAACACATTCAGTAAAACCAGTTGTTATATATGTTTATTAGGCGGAAAGAGAGATATTGAAGATCGTATTATTCCACGAAGTTTAGATGCTGACGATTCTGATGTGGACGTCAAAAGTGACAACGAGAGGTTGGCTGGTTTGCTGGTTGGCTGGCTTTCCATTTTATTAATTTACTAATAAAACTATTTTCCTAGCCTTTTTTCTCTTTACTTATTAGAGATAGCTTTAATTGCTTCGGCTTTTTATAATATGAATCCTTGGTCCAAGATCTGGTAGTCTAGTTTGTTTTGGGGTTGAGTATTGAAGTATCTCTAATGTTGTATGGCAGTGATGATGATGAGGATGACGACGACGAGGATGATACTGAAGCTCTTTTGGCTGAGCTGGAACAAATAAAGAAGGAAAGAGCGGAGGAGAAGCTTCGAAAGGTGAGCCTTTTGTCTATCTAGATAGCGTCACGATCTGAGTTGTGCTTGCAGGACCTTTATTTTTTTCCAAGATTTAAAAAGAATCCACCATGAGTCAAGTGATTAGTAACTGGGATCACTTCGAGTGGTCGAATCTTTTAAGACCAACGAGCTCCGAAATGCAGAGTTTAAATTTGGCTTCATCAGTTGCTTAAATCTGCATTACGATGTATAGGAAAGACAAGAGCGGGAGGAAGAGCTTAAAGTCAAGGAAGCGGAGTTACTCCGAGGAAATCCACTGCTTAACGAGCAACCCGCCTCTTTTAGTGTCAAAAGAAGGTCAGTTGGTCTAATTTAACCATTTTTTCACAACTACTATGAACATCTATTCTGATGATGCAACTTCCTGTTGGCTTTTGGGTTAGATGGGACGACGATGTTGTGTTCAAGAATCAGGCCCGTGGCGAAACAAAGACTCCTAAGCGCTTTATAAACGATACCATCAGGAACGATTTCCACCGAAAATTCTTGCACAAGTACATGAAGTAACATGGTTATCAAAATCTACTGGCGCTAAAGGATTCAAGTAAGTTCGAGTGGAGACTAAAACTGTATATTTGTTTTATCCGCATTACATAATTCGTAGTGTGACCTTCAGGTACCAGCCTCTATGAAATATGCATTGAATATTTTCAGTTTGCCTTCTGAATTAGATGAACTATAAGGATCCAAAACTATGTCAAACGAATGATTATTAAAATGCTTTCATGAGAACCTGTCTTAGCTCATACTTTAATAGCAATAATGATGATTGGTCTCCCAAATAATGGATTGGCTAGGACCCTGTACTTCAAATACTGTAGCCGAGGACCCTGGCTAGGAGAATCCAGACTTCTTGTAGGCCACAGTTCTTTCACCAAATAGAGCTTTTCGAGTTGAAACATGTATACCACTCTAAAGATCGATGAAAATGTTCAAAATATGTGAATATAGAACAATAACCCGATTCGAATAGAAGTCAAGAGATGTTTCCTTAAACTTTTAGGTTTGGTGGAACTTTACTAAATGATTTCAACGATGTAAAATACCGAAACAAAGACTTGGTCTCAGGTTCGGTATCGATCTCGGACTTCCAACTTCAACTGCTTGAAATAGCCTTAGCTCGTCAAAGTTATCCTTACTCCTTTCCTTTCTTTGAATGGTCTCTTTGAAACAATACTCAATTGTTTTCACCAGTTTTTTTGTCCAATCCTTCCCAACTTGGACAACTAGTTGTAGATGTTCGGGTGCCTTTCCAGCTTGGTTCGAGAGAGGCGAAATGCCGATGGATCTTCGGGAAGACTTGTGTTACGACAGCTTAACGACTCCATTGGGGAATTTAGAGAGTCAAAACACTTAAAATTTTATTTTTCATTATTCTTTAAATGAATTAATTTGTTCTACAACTATGTCTCACTATGTGGCTAGACGTAATTAGTTGTACTCGAGCTGAAAATTATTTTAAAAGTGTTGCTATAAGTTTTGTATAGCTTGTCTTTAATTATGACGATAAATTTCTTATAGGTGGAGTTATGAACTTTGATAGTGTAGAATTGTCGTCTTATAAAAAAATCATTGAAACAAACTGTTAATCGACGTTCATAACAAATATTTAGCTAGAACGAGTCAGCTTATTAAAACTCTCTTACTTGGTTGCCCACCTTGTGTTATTCATCTTTTTACTAAATTATGAACTTAAAATTACTACTTTTGTACTTTAGAAAACTTTTATAAGGGTGGTTGAGAATACTTTTATATATATTTTCTTTTTTTTTTTGTACAGAAAGAATATTTTAAAATGATATATTGTTTCATTATAATTTGAGTTTTTATAACATTTTTATATTAAATTATTTTATAAAATGAGTTAGTTTATATTGGTAAAAAAAAATTAGATTGAAATATTATTTTTCATTTTAACTTGAAATACTAGTGCTAATAATTAAATGATTCCAAAAGTAAATTTTATAATTAATAGCGTCGTTTAGTGAATTATATATACATTATCAAAATAGAGAAAATATTAATTTTAAAAAATATATAAATTGAGTATCATCGTTAGAAAAATAAACATTTTGTAGGAATTCTAAAAATTATAAAAAATGTTAAAAAATTGAATTTAATAGACCAAATTAATAAATTAATTTTTATATAAAATTTACTGAAGATATTACTTTTAAATTCTCAACTAAATACCGTTTTCGAATTTTAAAAATGAATTAAATATAAAAATAAAAATAAAAGATTTGTTCTTATTTTCTACAAAATTCTTTGTTTTTAAAAACAAAATTTTGAAACATTAATTGGAGTATTTGGTGTAATTTGTTAATTTTTTTTAAAATATATTAAAAATATTATAATATATATTTTATTCACAGTTTAAACCCTAGCCAATTCCACTTCAGATACCTCGTGCCGCTTAAACCTTCCCTCTCCCGCCTAAACCCTCCTCAGCCGTGCCGTTCAGTGCCGCCGCCGTCGTCGTCATTCTCGATTTTGCTTCTCCGCCGTGCTGCGTCATTCTTCGTCGATCTTCTTCCTTCTCTTGGTCTCAGGTATTCTATCTGTTCCCTTCTTTCCCTACAAACTCTCTCTTTCGGGTATCTACAAGTTTCTTAAGCCCTAAATAAAACCTTCTCTAACTGATTTTTTTCACGTAACCTCGTGTAAAGTTACAGCCGAGCCCAACGACTAGATAACTGTGTGCAAATTGAGTCGAAGGTTTATAATGTCCGGTAAAGATAAGAACTTGCATAATATGTCGGAGTCGGATTCCGAACAAGAAGATGTTGGCAAAGAAGGCATTGAATGGATAATGAACCTTCCAGATGTGCCCATGAAGCTCCCACCACATGTAGAATTGCAGAGGACTCGCGTCGAATGCAAAGCCGATGCTCCCATTCATGTACCCTTCTCTTCCCTCTCCCATGTTTTGTTTGTTTTATCATCTTACTCTTTTTTTATTCGAATTCTAAGAATGATGTTCAATTCAATGAAGTATATGTTTTGTTTTTGTTTTAGTCTTTTTGTTTTCTTTTTGATGCGGAAGCTATGTAGAATCTTGTTCAAGTCTTTGCTCCTAAGCTTGAGGAAATATTCTTTTTAAGACGTTTAATTTAGTTACGTAGTAGGTTGAAATGCATGAATAATATCAACCTATTAAATCAAGTTTCATGTTTTTGGAGAGAAGCGAATTTAATGGTTATGACTTTGTAGGTCTATATTGTTTTTCCATCTCTGTGCTTGATTTTTATTCATAGAATGTGTCTGGCTATGTTTCATACTGTAATAGGGTTGTTTAAATTTTCTTCTCATGGTCCTTGTGGAAAATGTTGTCTTTTGTAGACGGATACGATACAGTATTCTGGAGCATATGCTTCGTTGGGTATTGATAACAGCTTACGACTGGATTCTTTTCGCAAGAACTTCAAAATTGAAGTGATTGATCTCAAAGAGGATGACATGGAATTCGACATGATCGGCATTGACCCATCCCTCGCTAATGCATTTAGGAGAATCCTGATAGCTGAGGTAGGTAATCAAGCACATTGAATTAAAAGTAAACTACTTGTTTTTTTTACATAAGATTTTTTCTGGACTTTTGGTGTATGCCTCCTTCTCACCAATTCTGGTGCGCTACTGTGATTAATATATCAAAAAGCTATTGAGATTTAGCTTGAAGGCCAGATTTAAATTTTTATTCCCATGACTACACATTTTCTTTATCTGAAGCCTGTGTTTTGTATGGAAGAGACATATGCTCATATGATAATGTATGGAAGTTTGGAGTCTCCGCCTTGTGTAAAGGCTAGAAGAATAACTTTGGAATATCGTCTATTCTTCAAAATATGGAAGTTTGTTCATGTTTTCAGAGCTTAAAAATTAGTGATTTTGGTGATAATGGCTTGAGCTACTGGAGTTGTCTTGTTAGACATGACATGGTCCTCGGTGTACATATTATTTCTTTTTCCATTGTAACTTAAAGAAACACCCAGACGAAAGTTAGGAATGGGGCAATCCCATTAACTTCAATGATGATGCTATTGAAATTGAACTTCAGAATTTTCATTTAAAGAAGTGAAAAACTGATAGAAGTGAGACTTTTTGTTTTATAATAAAATAATAACTATCATGACACAGTTTTGCCTTTTTTCTTCCCTCAATATTTTGATTAAATTAAGGCTTATGCCTTGTCTCTCCTGTTGAAAAGCCTTTGGGAATGCTTTTAGACCCTGTTTGGGATTAATTTTACAGGCATTAAAAGTGACTATGGTGAAATTTTAACCCTTTTATTCTCTGGTAAATCTGCTTATTAAATAACCTAAAGAAAACCACTTTTAAAATTACTTTGATCTGTGTAAGATCTGTTTTCTGTGGCTTTTAGGATTGACTTCCCAAAAAATATGATAGCTCTTCTTACTAACTTTCCATAATTTCCATTTTATCCCATATTATTCTAGTATTTCACATTTAAGTTTGAAATTTATCCAACACGTATTTACTAAATATTACAACTAATTTTTCTGAAAGCACAGTTGACAATTATTTTAAAAGTTGTAGCTATCCCAAACTAGCCTTAGTCTGTAAGAGCGTTCCATGTGATTAGGGATGTTTATTAATGAATGGAATGTATGTATTTTTGCTGTTTGCGTTTTTCATATGCAATTTCCTTCTATGTTAACAATTACAATATTTACATTCTTGCTATGCTGATATGGGTTTGATCTAACTTTTTATGCAGGTTCCCACTATGGCTATTGAAAAAGTATTGGTTGCTAACAATACATCAATAGTCCAAGATGAAGTGCTTGCCCATAGGTTAGGTCTCATCCCGATTCGTGTTGATCCAAGGCTTTTTGAGTACTCAGGTATTTGTGTGTATGTATCTGTACATCTAATGTGCTTATGTGTGCTGATACTGGAAACTTTTATATGCATGTTAAGAAATAATTTCTATTTGGCTGACCCTAATACTTTCTGAAGACGCTTAACTAATAACTTCTGTTCAAAATTAGATAAAGACACGCCAAATGAGAAGAATACAATTGTTTTTAGACTCCATGTTCGCTGTGAACGTGGAAAACCTCGTCTTACCGGTATTTTTTCTGTTTCCTTTATAATGTATGCTAAAATTTCATAATTATAAACTTTTTTCAATATTTTCTTGTTTCACTACTAATGCTGAATGTATGATGGGTGATTCAGCGACGTCAAAAGCATTGACATGGCTACCAAATGGTAGTGAATTTCCTTTGGTATCTGATAAATCAGTTTCGAACACAAAGCCCAAAACATATACTTCTTTTAGTTGCAGCCAAGACACGCTGCCAGAATTTGCCAACAATCCAATTGGTCCAAAGGACGGTGATATTATACTTGCTAGACTCAGTTCGGGTCAGGTAACTGACCCGAAAACTTTATCTATTTTCTGTTGAAATATTGGGAAGAAGTGGTGTGCATGGGTAGATGATCAAAGCTGATGAGTTATGCTATAATGTAACATGTCTTAAATTTAAATTGTGTTTTGTACTTGTAATTTTGTTTGCAAATAATCGTGGAGCTCTGTAGGTGTTTTAGGTTAATTGAAGAAGCAAATTTGGTATAATGTGTATAAAAATCGTTACATATGAGTATGAAATTGGCATATATAATTTATAACTGGAGTTGATATCACTTCGTGTATGTGGTGCTTGTGCTACCAGACTAATTATTTATACTGCAAGTACCTTTACTTCCAATTGAAATCCATTTTGGTTCCAGTTCCGGTATTATAAATTTCTTTGTACCTTAATATATTGTAATTTTCATATTAGCAAGAAAATAATATTTATCATGGAATTACTCTCGAAGCAATGGGATGTTTGTTATGCTATGATTTTGGGTATATTTCAGTGCTTCATGTGCTATTTTTTCTCAGTAGTTAGCAGGTGTAAGTTTCTTAATTTTTGTTTCAAATATTTATAGGAAATTGAACTTGAAGCTCATGCTGTTAAAGGTATGGGTAAAACACATGCTAAGTGGTCTCCAGTGGCCACTGCTTGGTACAGAATGCTTCCTGAGGTAAGAAAATATGTTAATTTGTTACTCAAAGATACATAGATGTTTTGAAGCCCTAACGAAAATTGTGATATTAGGTTGTACTTCTGGAAGACATAGAGGATGAGTTGGCAGAAGAACTCAAAAACAAATGTCCTGTTAATGTCTTTGACATTGAAGATATAGCTAATGGTTAGTTTGCTTCATACATATGCTATTAATTTATGTTTATACTTGGAACATTACGGTGGTAATGTTTCGGTGATGGGAAGGATTCTTTAAGATTGAAGTTCTTGTTATGTATGGGCCTCTTTGATGATGTTCCCATTGCTTGTTTCCTGTTCCCATTTCTCATATTTAAGAAACAAGTTTGTTTTTGATAATCATTCTCATTTCTTGTCTCTAAAATTTAAAAAATGTATCTAAAGTTGGGGCCAAATTTCAGAAGCTACAAGAAGTAGTTTCGATGTGTTCCATTTCTTTCCTCCCGTCTTCCATTCCTTTTCCTCAACTTTCTAGGGCTCTTTCTTCAAGCTTTCTCCTCTCTCAAGCATAGGCACATACACCTGAGGGGTAAAATTTTTGCTCGATATCTATTTGATTTCTCGTCTTCTGTTTCCTCTTTGATTTCTGCTCTGTTTTCCGGTTTCTTTTTGTTCATTTAATTCTTTGAAAGAGTATTTTGAAATTTTCTCGAGTGTTTGATTCTCCAGCATTCTCTTCAATTTTGTGCTCATAAATTAAATTTCTTCTGATGTTGTGCTGGGTTTAGTATGCGTTTTGTGAGTTTGATGTATTTTGTTTATTTTATGGTATTCTGTGGCCGACTATGGAAAATATGTTTTTCTGTGTATTTTTGTTATGGTGTATGCCTTTCTTTTATTTTCTCCTGGATTTTTCATGCTTCTATACTTTCTTGGTACGAATCACTAGTGGAGCTTCTTTTTCTTCATTTGGTTGGTTCCAATCATTGTTGTCATTGGATCCCCATTGTTGTGCTGGTTTACTTCTTTGGGAAGTCTAACAGGGAGTCTAACAGGGAGGGGAGGAGGAGTAATGGAGACTTCTGGAGTTGTGGCTAAGATTTGTTCAAGGAAGTGAATTTGGTGGCTGTTGTTTTTGCTGTTTTGGGATGCTTCGCTTTGTGTAGGAAGACTAAGGAGAGTTAGAGTTGCTTAATCCAGGCTTGACTTTTGGATTCTGATGGAGAATTTGGGTGGGGTAGAGGAAGGATTTGAGGTTTTGGATCAAAAGGATATTTGGGATTTCTGATGAGGGTTAGATTTGGAAATTGTTTTTGTTCCTCTATGTTGGTTTTCTGACATTCTATGGCGGCGATAGTTCCTGATTTGAGGCATTAATGGGTTATTTAAGCTTTATTGAAAAGAAGAAACAAGAAAAAGTTACCCAAGCTTTTGTTTCTTGGTTTTTCTTTTTCAAGAAAGAAGAAACATAAATAGTTATGAAACAGATTCTCGTTTCAAGTTCTAAAAAAAACAGGAAACAAGAAACAATAATGTTATCAACTGGGGCTTATATAACTAATTTCCTTACTTTTTGGGAGTCTTATTTATATCCTGATGGAGTTTTAGCCTTGAAACTTTTCAAATACTGATAGAAAGTTGTCTTTCAATGAAAAACCAAAAGAGAGTTAAGTTTTTATCCTCTCCCTCGATATGCTATATCTCCTGCATCCCTTTCATTTCTGATGAATAGATGATGAGTTATTTGGTTCTTTCGTATATTGCAAAGATGGATTTCAAATGGTCGCATGTTATTGGTCTATTTTTTCCTAATTCAAGTTGATTCCTTTTTCTCCCACACTTAATTATTGTCAAATTTTGACTTGTAGGTAAGAAAAGGGCAACTGTTGCACGTCCACGAGCTTGCACATTGTGCAGAGAATGCATAAGAGGAGAAGCATGGGAGAAACGTGTCTCATTGCGTCGAGTGAAGGATCATTTCATTTGTAAGTTATGGATTTTTATGCACAACTTAGATGGTAGAACTAGACAGGATAAATAATGGTGCTGATGGTGGACACATCTTTTTTCGTTTAAGTGACTTTTTTCAAAATCACTTTTAAACATTGTAAGTCCAAGAAGAAAATGTATTTTTGTCACAGAAAAAGATTCTTTTAACTGGGTCAAACATACTCCCAAATAAACACCCTTAGTTATCTTTGTTAATAGTTTCAAGAAACTCATTCCTCATTGATTATGTTCATTTTCGTCTTTCCTTTCCTCTGCAGTTAAGATTGAATCAACAGGAGCTTTACCTCCAGAGGTGCTGTTCACTGAAGCTGTAAAGATTTTGGAAGATAAGTGTGAACGTTTAATTGCTGAGCTCTCTTGA

mRNA sequence

ATGTCTTCTCTGTCAAAGCCATCGATCCTCTGCCTTCCACATTCTTGCACCCATCGTCAAGAATTCCAGAGGGGATCTCTGAGGGCCGAGGAGACGAGGAAAAAAGATATCGCTTCTCATACGACCTTGAAGCCCAGGAAGGAAGGACAAGATACCCATGATGAATTGCAAAGGAGGAATCTCAGGGACGAGTTAGAAGATCGTGAAAGGAGGCATTTTTCATCAAAGAATAAATCATATGATGATAGAGATCATAGAAAAGGAAGCCAACTTCTGTTAGAAGGCGGAAAGAGAGATATTGAAGATCGTATTATTCCACGAAGTTTAGATGCTGACGATTCTGATGTGGACGTCAAAAGTGACAACGAGAGTGATGATGATGAGGATGACGACGACGAGGATGATACTGAAGCTCTTTTGGCTGAGCTGGAACAAATAAAGAAGGAAAGAGCGGAGGAGAAGCTTCGAAAGGAAAGACAAGAGCGGGAGGAAGAGCTTAAAGTCAAGGAAGCGGAGTTACTCCGAGGAAATCCACTGCTTAACGAGCAACCCGCCTCTTTTAGTGTCAAAAGAAGATGGGACGACGATGTTGTGTTCAAGAATCAGGCCCGTGGCGAAACAAAGACTCCTAAGCGCTTTATAAACGATACCATCAGGAACGATTTCCACCGAAAATTCTTGCACAAATACCTCGTGCCGCTTAAACCTTCCCTCTCCCGCCTAAACCCTCCTCAGCCGTGCCGTTCAGTGCCGCCGCCGTCGTCGTCATTCTCGATTTTGCTTCTCCGCCGTGCTGCGTCATTCTTCGTCGATCTTCTTCCTTCTCTTGGTCTCAGGTTTATAATGTCCGGTAAAGATAAGAACTTGCATAATATGTCGGAGTCGGATTCCGAACAAGAAGATGTTGGCAAAGAAGGCATTGAATGGATAATGAACCTTCCAGATGTGCCCATGAAGCTCCCACCACATGTAGAATTGCAGAGGACTCGCGTCGAATGCAAAGCCGATGCTCCCATTCATACGGATACGATACAGTATTCTGGAGCATATGCTTCGTTGGGTATTGATAACAGCTTACGACTGGATTCTTTTCGCAAGAACTTCAAAATTGAAGTGATTGATCTCAAAGAGGATGACATGGAATTCGACATGATCGGCATTGACCCATCCCTCGCTAATGCATTTAGGAGAATCCTGATAGCTGAGGTTCCCACTATGGCTATTGAAAAAGTATTGGTTGCTAACAATACATCAATAGTCCAAGATGAAGTGCTTGCCCATAGGTTAGGTCTCATCCCGATTCGTGTTGATCCAAGGCTTTTTGAGTACTCAGATAAAGACACGCCAAATGAGAAGAATACAATTGTTTTTAGACTCCATGTTCGCTGTGAACGTGGAAAACCTCGTCTTACCGCGACGTCAAAAGCATTGACATGGCTACCAAATGGTAGTGAATTTCCTTTGGTATCTGATAAATCAGTTTCGAACACAAAGCCCAAAACATATACTTCTTTTAGTTGCAGCCAAGACACGCTGCCAGAATTTGCCAACAATCCAATTGGTCCAAAGGACGGTGATATTATACTTGCTAGACTCAGTTCGGGTCAGGAAATTGAACTTGAAGCTCATGCTGTTAAAGGTATGGGTAAAACACATGCTAAGTGGTCTCCAGTGGCCACTGCTTGGTACAGAATGCTTCCTGAGGTTGTACTTCTGGAAGACATAGAGGATGAGTTGGCAGAAGAACTCAAAAACAAATGTCCTGTTAATGTCTTTGACATTGAAGATATAGCTAATGGTAAGAAAAGGGCAACTGTTGCACGTCCACGAGCTTGCACATTGTGCAGAGAATGCATAAGAGGAGAAGCATGGGAGAAACGTGTCTCATTGCGTCGAGTGAAGGATCATTTCATTTTTAAGATTGAATCAACAGGAGCTTTACCTCCAGAGGTGCTGTTCACTGAAGCTGTAAAGATTTTGGAAGATAAGTGTGAACGTTTAATTGCTGAGCTCTCTTGA

Coding sequence (CDS)

ATGTCTTCTCTGTCAAAGCCATCGATCCTCTGCCTTCCACATTCTTGCACCCATCGTCAAGAATTCCAGAGGGGATCTCTGAGGGCCGAGGAGACGAGGAAAAAAGATATCGCTTCTCATACGACCTTGAAGCCCAGGAAGGAAGGACAAGATACCCATGATGAATTGCAAAGGAGGAATCTCAGGGACGAGTTAGAAGATCGTGAAAGGAGGCATTTTTCATCAAAGAATAAATCATATGATGATAGAGATCATAGAAAAGGAAGCCAACTTCTGTTAGAAGGCGGAAAGAGAGATATTGAAGATCGTATTATTCCACGAAGTTTAGATGCTGACGATTCTGATGTGGACGTCAAAAGTGACAACGAGAGTGATGATGATGAGGATGACGACGACGAGGATGATACTGAAGCTCTTTTGGCTGAGCTGGAACAAATAAAGAAGGAAAGAGCGGAGGAGAAGCTTCGAAAGGAAAGACAAGAGCGGGAGGAAGAGCTTAAAGTCAAGGAAGCGGAGTTACTCCGAGGAAATCCACTGCTTAACGAGCAACCCGCCTCTTTTAGTGTCAAAAGAAGATGGGACGACGATGTTGTGTTCAAGAATCAGGCCCGTGGCGAAACAAAGACTCCTAAGCGCTTTATAAACGATACCATCAGGAACGATTTCCACCGAAAATTCTTGCACAAATACCTCGTGCCGCTTAAACCTTCCCTCTCCCGCCTAAACCCTCCTCAGCCGTGCCGTTCAGTGCCGCCGCCGTCGTCGTCATTCTCGATTTTGCTTCTCCGCCGTGCTGCGTCATTCTTCGTCGATCTTCTTCCTTCTCTTGGTCTCAGGTTTATAATGTCCGGTAAAGATAAGAACTTGCATAATATGTCGGAGTCGGATTCCGAACAAGAAGATGTTGGCAAAGAAGGCATTGAATGGATAATGAACCTTCCAGATGTGCCCATGAAGCTCCCACCACATGTAGAATTGCAGAGGACTCGCGTCGAATGCAAAGCCGATGCTCCCATTCATACGGATACGATACAGTATTCTGGAGCATATGCTTCGTTGGGTATTGATAACAGCTTACGACTGGATTCTTTTCGCAAGAACTTCAAAATTGAAGTGATTGATCTCAAAGAGGATGACATGGAATTCGACATGATCGGCATTGACCCATCCCTCGCTAATGCATTTAGGAGAATCCTGATAGCTGAGGTTCCCACTATGGCTATTGAAAAAGTATTGGTTGCTAACAATACATCAATAGTCCAAGATGAAGTGCTTGCCCATAGGTTAGGTCTCATCCCGATTCGTGTTGATCCAAGGCTTTTTGAGTACTCAGATAAAGACACGCCAAATGAGAAGAATACAATTGTTTTTAGACTCCATGTTCGCTGTGAACGTGGAAAACCTCGTCTTACCGCGACGTCAAAAGCATTGACATGGCTACCAAATGGTAGTGAATTTCCTTTGGTATCTGATAAATCAGTTTCGAACACAAAGCCCAAAACATATACTTCTTTTAGTTGCAGCCAAGACACGCTGCCAGAATTTGCCAACAATCCAATTGGTCCAAAGGACGGTGATATTATACTTGCTAGACTCAGTTCGGGTCAGGAAATTGAACTTGAAGCTCATGCTGTTAAAGGTATGGGTAAAACACATGCTAAGTGGTCTCCAGTGGCCACTGCTTGGTACAGAATGCTTCCTGAGGTTGTACTTCTGGAAGACATAGAGGATGAGTTGGCAGAAGAACTCAAAAACAAATGTCCTGTTAATGTCTTTGACATTGAAGATATAGCTAATGGTAAGAAAAGGGCAACTGTTGCACGTCCACGAGCTTGCACATTGTGCAGAGAATGCATAAGAGGAGAAGCATGGGAGAAACGTGTCTCATTGCGTCGAGTGAAGGATCATTTCATTTTTAAGATTGAATCAACAGGAGCTTTACCTCCAGAGGTGCTGTTCACTGAAGCTGTAAAGATTTTGGAAGATAAGTGTGAACGTTTAATTGCTGAGCTCTCTTGA

Protein sequence

MSSLSKPSILCLPHSCTHRQEFQRGSLRAEETRKKDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDNESDDDEDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLHKYLVPLKPSLSRLNPPQPCRSVPPPSSSFSILLLRRAASFFVDLLPSLGLRFIMSGKDKNLHNMSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

Homology

[Close]

BLAST of Csor.00g206020 vs. ExPASy Swiss-Prot
Match: Q32L22 (DNA-directed RNA polymerases I and III subunit RPAC1 OS=Bos taurus OX=9913 GN=POLR1C PE=2 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.5e-79
Identity = 170/350 (48.57%), Postives = 220/350 (62.86%), Query Frame = 0


Query: 324 VELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFD 383
           VE  RTRV        +  T  + G Y+  G D++   D F KNF+++V+ + E+ +EFD
Sbjct: 7   VEEMRTRVVLGEFGVRNVHTTDFPGNYS--GYDDAWDQDRFEKNFRVDVVHMDENSLEFD 66

Query: 384 MIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEY 443
           M+GID ++ANAFRRIL+AEVPTMA+EKVLV NNTSIVQDE+LAHRLGLIPI  DPRLFEY
Sbjct: 67  MVGIDAAIANAFRRILLAEVPTMAVEKVLVYNNTSIVQDEILAHRLGLIPIHADPRLFEY 126

Query: 444 SDK--DTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKT 503
            ++  +   E +T+ FRL VRC R       +S       N   +          T+  T
Sbjct: 127 RNQGDEGGTEIDTLQFRLQVRCTRNPHAAKDSSDPNELYVNHRVY----------TRHMT 186

Query: 504 YTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATA 563
           +       D  PE A   I P   DI++A+L  GQEI+L  H VKG+GK HAK+SPVATA
Sbjct: 187 WVPLGNQADLFPEGA---IRPVHDDILIAQLRPGQEIDLLMHCVKGIGKDHAKFSPVATA 246

Query: 564 WYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRG 623
            YR+LP++ LLE +E E AEEL       V ++++I  GKK A VA PR  T  RE  R 
Sbjct: 247 SYRLLPDITLLEPVEGEAAEELSRCFSPGVIEVQEI-QGKKVARVANPRLDTFSREVFRN 306

Query: 624 EAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAEL 672
           E  +K V L RV+DHFIF +ESTG LPP+VL +EA+K+L  KC+R + EL
Sbjct: 307 EKLKKVVRLARVRDHFIFSVESTGVLPPDVLVSEAIKVLMGKCQRFLDEL 340

[Close]

BLAST of Csor.00g206020 vs. ExPASy Swiss-Prot
Match: P52432 (DNA-directed RNA polymerases I and III subunit RPAC1 OS=Mus musculus OX=10090 GN=Polr1c PE=1 SV=3)

HSP 1 Score: 294.3 bits (752), Expect = 3.5e-78
Identity = 169/350 (48.29%), Postives = 216/350 (61.71%), Query Frame = 0


Query: 324 VELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFD 383
           VE  RTRV        +  T  + G YA  G D++   + F KNF+++V+ + ED +EFD
Sbjct: 7   VEEMRTRVVLGEFGVRNVHTTDFPGNYA--GYDDAWDQNRFEKNFRVDVVQMDEDTLEFD 66

Query: 384 MIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEY 443
           M+GID ++ANAFRRIL+AEVPTMA+EKVLV NNTSIVQDE+LAHRLGLIPI  DPRLFEY
Sbjct: 67  MVGIDAAIANAFRRILLAEVPTMAVEKVLVYNNTSIVQDEILAHRLGLIPILADPRLFEY 126

Query: 444 SD--KDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKT 503
            +  ++   E +T+ FRL VRC R       +S       N   +          T+  T
Sbjct: 127 RNQGEEEGTEIDTLQFRLQVRCTRNPNAAKDSSDPNELYVNHKVY----------TRHMT 186

Query: 504 YTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATA 563
           +       D  PE     I P   DI++A+L  GQEI+L  H VKG+GK HAK+SPVATA
Sbjct: 187 WVPLGNQADVFPE---GTIRPVHDDILIAQLRPGQEIDLMMHCVKGIGKDHAKFSPVATA 246

Query: 564 WYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRG 623
            YR+LP + LLE +E E AEEL       V ++E++  GKK A VA  R  T  RE  R 
Sbjct: 247 SYRLLPAITLLEPVEGEAAEELSQCFSPGVIEVEEV-QGKKVARVANARLDTFSREIFRH 306

Query: 624 EAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAEL 672
           E  +K V L RV+DH+IF +ESTG LPP+VL +EA+KIL  KC R + EL
Sbjct: 307 EKLKKAVRLARVRDHYIFSVESTGVLPPDVLVSEAIKILMGKCRRFLDEL 340

[Close]

BLAST of Csor.00g206020 vs. ExPASy Swiss-Prot
Match: O15160 (DNA-directed RNA polymerases I and III subunit RPAC1 OS=Homo sapiens OX=9606 GN=POLR1C PE=1 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 4.6e-78
Identity = 166/350 (47.43%), Postives = 218/350 (62.29%), Query Frame = 0


Query: 324 VELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFD 383
           VE  R+RV        +  T  + G Y+  G D++   D F KNF+++V+ + E+ +EFD
Sbjct: 7   VEEMRSRVVLGEFGVRNVHTTDFPGNYS--GYDDAWDQDRFEKNFRVDVVHMDENSLEFD 66

Query: 384 MIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEY 443
           M+GID ++ANAFRRIL+AEVPTMA+EKVLV NNTSIVQDE+LAHRLGLIPI  DPRLFEY
Sbjct: 67  MVGIDAAIANAFRRILLAEVPTMAVEKVLVYNNTSIVQDEILAHRLGLIPIHADPRLFEY 126

Query: 444 SDK--DTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKT 503
            ++  +   E +T+ FRL VRC R       +S       N   +          T+  T
Sbjct: 127 RNQGDEEGTEIDTLQFRLQVRCTRNPHAAKDSSDPNELYVNHKVY----------TRHMT 186

Query: 504 YTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATA 563
           +       D  PE     I P   DI++A+L  GQEI+L  H VKG+GK HAK+SPVATA
Sbjct: 187 WIPLGNQADLFPE---GTIRPVHDDILIAQLRPGQEIDLLMHCVKGIGKDHAKFSPVATA 246

Query: 564 WYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRG 623
            YR+LP++ LLE +E E AEEL       V +++++  GKK A VA PR  T  RE  R 
Sbjct: 247 SYRLLPDITLLEPVEGEAAEELSRCFSPGVIEVQEV-QGKKVARVANPRLDTFSREIFRN 306

Query: 624 EAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAEL 672
           E  +K V L RV+DH+IF +ESTG LPP+VL +EA+K+L  KC R + EL
Sbjct: 307 EKLKKVVRLARVRDHYIFSVESTGVLPPDVLVSEAIKVLMGKCRRFLDEL 340

[Close]

BLAST of Csor.00g206020 vs. ExPASy Swiss-Prot
Match: Q54SN4 (DNA-directed RNA polymerases I and III subunit rpac1 OS=Dictyostelium discoideum OX=44689 GN=polr1c PE=3 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 2.2e-72
Identity = 151/352 (42.90%), Postives = 213/352 (60.51%), Query Frame = 0


Query: 322 PHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDME 381
           P++E +RT+V        +     YSGAY S+G DNS  L+ F++NFKI ++    +++ 
Sbjct: 13  PNLENKRTKVTLTNSGVENARGTYYSGAYTSVGYDNSFNLNRFKENFKINILSESANELV 72

Query: 382 FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLF 441
           F+MIGID  +ANA RRI+I+E+PTMAIEKV + NNTSI+QDEVLAHRLG+IPI+VDPR F
Sbjct: 73  FEMIGIDAPIANALRRIMISEIPTMAIEKVYIINNTSILQDEVLAHRLGMIPIKVDPRKF 132

Query: 442 EYSDKDTPNE----KNTIVFRLHVRCER----GK-PRLTATSKALTWLPNGSEFPLVSDK 501
            +     PN+    ++T++F+L V+CE+    GK    TA SK L W+P   +       
Sbjct: 133 NFK---LPNKEYTAEDTLIFQLKVKCEKDSVTGKIINETALSKHLIWVPTQDQ------- 192

Query: 502 SVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGMGKTH 561
                           ++  P   + P  P + DI + +L  GQ I+++ +  K +G+ H
Sbjct: 193 ----------------EEMFPNEEDRP-RPMEDDIPIMKLRPGQVIDIQCYCEKNIGREH 252

Query: 562 AKWSPVATAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVARPRAC 621
            KWSPV TA YR+ P + + + I+ + A +L  KCP  VFDIED      +   ARP  C
Sbjct: 253 IKWSPVCTASYRLQPVISVDKSIKGDKANQLLEKCPKKVFDIED----SGQVVAARPLDC 312

Query: 622 TLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKC 665
           T+CRECIR   +E+ V + RV+DHFIF IESTGAL    +F EA+KI  +KC
Sbjct: 313 TMCRECIRDPEFEQNVKIERVRDHFIFSIESTGALKSREIFQEAIKIFIEKC 333

[Close]

BLAST of Csor.00g206020 vs. ExPASy Swiss-Prot
Match: O94616 (DNA-directed RNA polymerases I and III subunit RPAC1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpc40 PE=1 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 2.4e-66
Identity = 142/360 (39.44%), Postives = 209/360 (58.06%), Query Frame = 0


Query: 324 VELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFD 383
           V+  RT +   +D      ++ + G Y     DN   LD F+KN K+ +  L ++ M F+
Sbjct: 4   VDRSRTEISVLSDRVTDVGSVDFPGYY--FDEDNIWDLDKFKKNLKVSITSLDQETMVFE 63

Query: 384 MIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEY 443
           + GID S+ANAFRRILIAE+PT+A E V + NNTSI+QDEVL+HR+GL+PI  DP +F++
Sbjct: 64  ISGIDASIANAFRRILIAEIPTLAFEFVYIINNTSIIQDEVLSHRIGLVPISADPDMFKW 123

Query: 444 SDKDTPNEK------NTIVFRLHVRCERGK---------PRLTATSKA----LTWLPNGS 503
                P ++      +T+VF L+ +CE  K          RL   S+     L W P G 
Sbjct: 124 FQHPLPGQEATHTDYDTVVFSLNKKCEFNKNAATDEKDPKRLYVNSEVYSGDLIWKPQGR 183

Query: 504 EFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHA 563
           +                             FA+NPI   + DI++A+L  GQEI+LEAHA
Sbjct: 184 Q--------------------------EERFADNPIRVVNPDIVVAKLRPGQEIDLEAHA 243

Query: 564 VKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRA 623
           + G+G+ HAK+SPVATA YR+LP + +L  IE E A + +   P  V ++E+  +GKK+A
Sbjct: 244 ILGIGQDHAKFSPVATASYRLLPTIHILSPIEGEDAVKFQKCFPKGVIELEEGPDGKKQA 303

Query: 624 TVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKC 665
            VA  R  T+ REC+R   +  +V L RV+DH++F +ESTG + P+VLF +++ +L+ KC
Sbjct: 304 RVADVRKDTVSRECLRHPEFADKVQLGRVRDHYLFSVESTGIMKPDVLFIKSIAVLKSKC 335

[Close]

BLAST of Csor.00g206020 vs. NCBI nr
Match: KAG6596753.1 (DNA-directed RNA polymerases I and III subunit RPAC1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1302 bits (3369), Expect = 0.0
Identity = 672/672 (100.00%), Postives = 672/672 (100.00%), Query Frame = 0


Query: 1   MSSLSKPSILCLPHSCTHRQEFQRGSLRAEETRKKDIASHTTLKPRKEGQDTHDELQRRN 60
           MSSLSKPSILCLPHSCTHRQEFQRGSLRAEETRKKDIASHTTLKPRKEGQDTHDELQRRN
Sbjct: 1   MSSLSKPSILCLPHSCTHRQEFQRGSLRAEETRKKDIASHTTLKPRKEGQDTHDELQRRN 60

Query: 61  LRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKS 120
           LRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKS
Sbjct: 61  LRDELEDRERRHFSSKNKSYDDRDHRKGSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKS 120

Query: 121 DNESDDDEDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLL 180
           DNESDDDEDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLL
Sbjct: 121 DNESDDDEDDDDEDDTEALLAELEQIKKERAEEKLRKERQEREEELKVKEAELLRGNPLL 180

Query: 181 NEQPASFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLHKYLVPLKPSLSR 240
           NEQPASFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLHKYLVPLKPSLSR
Sbjct: 181 NEQPASFSVKRRWDDDVVFKNQARGETKTPKRFINDTIRNDFHRKFLHKYLVPLKPSLSR 240

Query: 241 LNPPQPCRSVPPPSSSFSILLLRRAASFFVDLLPSLGLRFIMSGKDKNLHNMSESDSEQE 300
           LNPPQPCRSVPPPSSSFSILLLRRAASFFVDLLPSLGLRFIMSGKDKNLHNMSESDSEQE
Sbjct: 241 LNPPQPCRSVPPPSSSFSILLLRRAASFFVDLLPSLGLRFIMSGKDKNLHNMSESDSEQE 300

Query: 301 DVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLR 360
           DVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLR
Sbjct: 301 DVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLR 360

Query: 361 LDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIV 420
           LDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIV
Sbjct: 361 LDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIV 420

Query: 421 QDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWL 480
           QDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWL
Sbjct: 421 QDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWL 480

Query: 481 PNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIEL 540
           PNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIEL
Sbjct: 481 PNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIEL 540

Query: 541 EAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANG 600
           EAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANG
Sbjct: 541 EAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANG 600

Query: 601 KKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKIL 660
           KKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKIL
Sbjct: 601 KKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKIL 660

Query: 661 EDKCERLIAELS 672
           EDKCERLIAELS
Sbjct: 661 EDKCERLIAELS 672

[Close]

BLAST of Csor.00g206020 vs. NCBI nr
Match: XP_022936430.1 (DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita moschata] >XP_022936440.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita moschata] >XP_022936448.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita moschata])

HSP 1 Score: 782 bits (2019), Expect = 1.60e-280
Identity = 391/391 (100.00%), Postives = 391/391 (100.00%), Query Frame = 0


Query: 282 MSGKDKNLHNMSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHT 341
           MSGKDKNLHNMSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHT
Sbjct: 1   MSGKDKNLHNMSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHT 60

Query: 342 DTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIA 401
           DTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIA
Sbjct: 61  DTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIA 120

Query: 402 EVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHV 461
           EVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHV
Sbjct: 121 EVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHV 180

Query: 462 RCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIG 521
           RCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIG
Sbjct: 181 RCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIG 240

Query: 522 PKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAE 581
           PKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAE
Sbjct: 241 PKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAE 300

Query: 582 ELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKI 641
           ELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKI
Sbjct: 301 ELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKI 360

Query: 642 ESTGALPPEVLFTEAVKILEDKCERLIAELS 672
           ESTGALPPEVLFTEAVKILEDKCERLIAELS
Sbjct: 361 ESTGALPPEVLFTEAVKILEDKCERLIAELS 391

[Close]

BLAST of Csor.00g206020 vs. NCBI nr
Match: XP_023540473.1 (DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita pepo subsp. pepo] >XP_023540474.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 778 bits (2010), Expect = 3.74e-279
Identity = 389/391 (99.49%), Postives = 390/391 (99.74%), Query Frame = 0


Query: 282 MSGKDKNLHNMSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHT 341
           MSGKDKNLHNMSESDSE EDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHT
Sbjct: 1   MSGKDKNLHNMSESDSEHEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHT 60

Query: 342 DTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIA 401
           DTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIA
Sbjct: 61  DTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIA 120

Query: 402 EVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHV 461
           EVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHV
Sbjct: 121 EVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHV 180

Query: 462 RCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIG 521
           RCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIG
Sbjct: 181 RCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIG 240

Query: 522 PKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAE 581
           PKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLE+IEDELAE
Sbjct: 241 PKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE 300

Query: 582 ELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKI 641
           ELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKI
Sbjct: 301 ELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKI 360

Query: 642 ESTGALPPEVLFTEAVKILEDKCERLIAELS 672
           ESTGALPPEVLFTEAVKILEDKCERLIAELS
Sbjct: 361 ESTGALPPEVLFTEAVKILEDKCERLIAELS 391

[Close]

BLAST of Csor.00g206020 vs. NCBI nr
Match: XP_023005438.1 (DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita maxima])

HSP 1 Score: 774 bits (1998), Expect = 2.50e-277
Identity = 386/391 (98.72%), Postives = 391/391 (100.00%), Query Frame = 0


Query: 282 MSGKDKNLHNMSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHT 341
           MSG+DKNLH+MSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHT
Sbjct: 1   MSGEDKNLHSMSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHT 60

Query: 342 DTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIA 401
           DTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIA
Sbjct: 61  DTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIA 120

Query: 402 EVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHV 461
           EVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHV
Sbjct: 121 EVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHV 180

Query: 462 RCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIG 521
           RCERGKPRLTATS+ALTWLPNGSEFPLVSDKSVSN+KPKTYTSFSCSQDTLPEFANNPIG
Sbjct: 181 RCERGKPRLTATSEALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFANNPIG 240

Query: 522 PKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAE 581
           PKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLE+IEDELAE
Sbjct: 241 PKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE 300

Query: 582 ELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKI 641
           ELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKI
Sbjct: 301 ELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKI 360

Query: 642 ESTGALPPEVLFTEAVKILEDKCERLIAELS 672
           ESTGALPPEVLFTEAVKILEDKCERLIAELS
Sbjct: 361 ESTGALPPEVLFTEAVKILEDKCERLIAELS 391

[Close]

BLAST of Csor.00g206020 vs. NCBI nr
Match: KAG7028290.1 (DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 773 bits (1995), Expect = 6.88e-277
Identity = 389/391 (99.49%), Postives = 389/391 (99.49%), Query Frame = 0


Query: 282 MSGKDKNLHNMSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHT 341
           MSGK KNLHNMSESDSEQ DVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHT
Sbjct: 1   MSGKGKNLHNMSESDSEQ-DVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHT 60

Query: 342 DTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIA 401
           DTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIA
Sbjct: 61  DTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIA 120

Query: 402 EVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHV 461
           EVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHV
Sbjct: 121 EVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHV 180

Query: 462 RCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIG 521
           RCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIG
Sbjct: 181 RCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIG 240

Query: 522 PKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAE 581
           PKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAE
Sbjct: 241 PKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAE 300

Query: 582 ELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKI 641
           ELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKI
Sbjct: 301 ELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKI 360

Query: 642 ESTGALPPEVLFTEAVKILEDKCERLIAELS 672
           ESTGALPPEVLFTEAVKILEDKCERLIAELS
Sbjct: 361 ESTGALPPEVLFTEAVKILEDKCERLIAELS 390

[Close]

BLAST of Csor.00g206020 vs. ExPASy TrEMBL
Match: A0A6J1FDA3 (DNA-directed RNA polymerases I and III subunit RPAC1 OS=Cucurbita moschata OX=3662 GN=LOC111443051 PE=3 SV=1)

HSP 1 Score: 782 bits (2019), Expect = 7.75e-281
Identity = 391/391 (100.00%), Postives = 391/391 (100.00%), Query Frame = 0


Query: 282 MSGKDKNLHNMSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHT 341
           MSGKDKNLHNMSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHT
Sbjct: 1   MSGKDKNLHNMSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHT 60

Query: 342 DTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIA 401
           DTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIA
Sbjct: 61  DTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIA 120

Query: 402 EVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHV 461
           EVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHV
Sbjct: 121 EVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHV 180

Query: 462 RCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIG 521
           RCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIG
Sbjct: 181 RCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIG 240

Query: 522 PKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAE 581
           PKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAE
Sbjct: 241 PKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAE 300

Query: 582 ELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKI 641
           ELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKI
Sbjct: 301 ELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKI 360

Query: 642 ESTGALPPEVLFTEAVKILEDKCERLIAELS 672
           ESTGALPPEVLFTEAVKILEDKCERLIAELS
Sbjct: 361 ESTGALPPEVLFTEAVKILEDKCERLIAELS 391

[Close]

BLAST of Csor.00g206020 vs. ExPASy TrEMBL
Match: A0A6J1L269 (DNA-directed RNA polymerases I and III subunit RPAC1 OS=Cucurbita maxima OX=3661 GN=LOC111498423 PE=3 SV=1)

HSP 1 Score: 774 bits (1998), Expect = 1.21e-277
Identity = 386/391 (98.72%), Postives = 391/391 (100.00%), Query Frame = 0


Query: 282 MSGKDKNLHNMSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHT 341
           MSG+DKNLH+MSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHT
Sbjct: 1   MSGEDKNLHSMSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHT 60

Query: 342 DTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIA 401
           DTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIA
Sbjct: 61  DTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIA 120

Query: 402 EVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHV 461
           EVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHV
Sbjct: 121 EVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHV 180

Query: 462 RCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIG 521
           RCERGKPRLTATS+ALTWLPNGSEFPLVSDKSVSN+KPKTYTSFSCSQDTLPEFANNPIG
Sbjct: 181 RCERGKPRLTATSEALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFANNPIG 240

Query: 522 PKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAE 581
           PKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLE+IEDELAE
Sbjct: 241 PKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE 300

Query: 582 ELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKI 641
           ELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKI
Sbjct: 301 ELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKI 360

Query: 642 ESTGALPPEVLFTEAVKILEDKCERLIAELS 672
           ESTGALPPEVLFTEAVKILEDKCERLIAELS
Sbjct: 361 ESTGALPPEVLFTEAVKILEDKCERLIAELS 391

[Close]

BLAST of Csor.00g206020 vs. ExPASy TrEMBL
Match: A0A0A0L637 (DNA-directed RNA polymerases I and III subunit RPAC1 OS=Cucumis sativus OX=3659 GN=Csa_3G047880 PE=3 SV=1)

HSP 1 Score: 714 bits (1844), Expect = 3.12e-254
Identity = 357/392 (91.07%), Postives = 374/392 (95.41%), Query Frame = 0


Query: 282 MSGKDKNLHNMSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHT 341
           MSGKDKNLHNMSES+SEQE V KEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHT
Sbjct: 1   MSGKDKNLHNMSESESEQEGVDKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHT 60

Query: 342 DTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIA 401
           DTIQYSGA+AS+G DNSLRLD+FR NFKIEVIDLKEDD+EFDMIGIDP+LANAFRRILI+
Sbjct: 61  DTIQYSGAFASMGFDNSLRLDNFRNNFKIEVIDLKEDDIEFDMIGIDPALANAFRRILIS 120

Query: 402 EVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHV 461
           EVPTMAIEKVL ANNTSIVQDEVLAHRLGL+PIRVDPRLF+YSDKD PNE NTIVFRLH 
Sbjct: 121 EVPTMAIEKVLFANNTSIVQDEVLAHRLGLVPIRVDPRLFKYSDKDAPNENNTIVFRLHA 180

Query: 462 RCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLP-EFANNPI 521
            CERGKPRLT TSKALTWLPNGSEFPLVSDKSVSN+KPKTYTSFSCSQ+TL  EF+NNPI
Sbjct: 181 CCERGKPRLTVTSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQNTLSKEFSNNPI 240

Query: 522 GPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELA 581
           GPKD DIILARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVL+E+IEDELA
Sbjct: 241 GPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLMEEIEDELA 300

Query: 582 EELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFK 641
           EEL+ KCPVNVFDIEDIA GKKRATVARPR CTLCRECIRG+AWEKRV+LRRVKDHFIFK
Sbjct: 301 EELEKKCPVNVFDIEDIA-GKKRATVARPRDCTLCRECIRGDAWEKRVALRRVKDHFIFK 360

Query: 642 IESTGALPPEVLFTEAVKILEDKCERLIAELS 672
           IESTGALPPEVLFTEAVKILEDKCERLIAELS
Sbjct: 361 IESTGALPPEVLFTEAVKILEDKCERLIAELS 391

[Close]

BLAST of Csor.00g206020 vs. ExPASy TrEMBL
Match: A0A1S4DX61 (DNA-directed RNA polymerases I and III subunit RPAC1 OS=Cucumis melo OX=3656 GN=LOC103491032 PE=3 SV=1)

HSP 1 Score: 705 bits (1820), Expect = 1.38e-250
Identity = 352/392 (89.80%), Postives = 370/392 (94.39%), Query Frame = 0


Query: 282 MSGKDKNLH-NMSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIH 341
           MSGKDKNLH  M+ES+SEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECK DAPIH
Sbjct: 1   MSGKDKNLHIMMTESESEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKGDAPIH 60

Query: 342 TDTIQYSGAYASLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILI 401
           TDTIQYSGA+AS+G DNSLRLD+FR NFKIEVI+LK DD+EFDMIGIDP+LANAFRRILI
Sbjct: 61  TDTIQYSGAFASMGFDNSLRLDNFRNNFKIEVINLKGDDIEFDMIGIDPALANAFRRILI 120

Query: 402 AEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLH 461
           AEVPTMAIEKVL ANNTSIVQDEVLAHRLGLIPIRVDPRLF+YSDKD PNE NTIVFRLH
Sbjct: 121 AEVPTMAIEKVLFANNTSIVQDEVLAHRLGLIPIRVDPRLFKYSDKDAPNENNTIVFRLH 180

Query: 462 VRCERGKPRLTATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPI 521
            RCERGKPRLT  S+ALTWLPNGSEFPLVSDKS+ N+KP+TYTSFSCSQD LPEF+ N I
Sbjct: 181 ARCERGKPRLTVKSEALTWLPNGSEFPLVSDKSIPNSKPQTYTSFSCSQDKLPEFSKNSI 240

Query: 522 GPKDGDIILARLSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELA 581
           GPKD DIILARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV+LLE+IEDELA
Sbjct: 241 GPKDSDIILARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVLLLEEIEDELA 300

Query: 582 EELKNKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFK 641
           EELK KCPVNVFDIEDIA GKKRATVARPRACTLCRECIRG+AWEKRV+LRRVKDHFIFK
Sbjct: 301 EELKRKCPVNVFDIEDIA-GKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFK 360

Query: 642 IESTGALPPEVLFTEAVKILEDKCERLIAELS 672
           IESTGALPP VLFTEAVKILEDKCERLIAELS
Sbjct: 361 IESTGALPPNVLFTEAVKILEDKCERLIAELS 391

[Close]

BLAST of Csor.00g206020 vs. ExPASy TrEMBL
Match: A0A6J1DXI7 (DNA-directed RNA polymerases I and III subunit RPAC1 OS=Momordica charantia OX=3673 GN=LOC111025015 PE=3 SV=1)

HSP 1 Score: 699 bits (1805), Expect = 1.74e-248
Identity = 346/381 (90.81%), Postives = 363/381 (95.28%), Query Frame = 0


Query: 292 MSESDSEQEDVGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYA 351
           MS+S+SEQ   GKEGIEWIMNLPDVPMKLPPH+E+QRTRVECKADAPIHTDTIQYSGAYA
Sbjct: 1   MSDSESEQV-AGKEGIEWIMNLPDVPMKLPPHLEMQRTRVECKADAPIHTDTIQYSGAYA 60

Query: 352 SLGIDNSLRLDSFRKNFKIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAIEKV 411
           S+G+DNSLRLD FR NFKIEVIDL EDD+EFDMIGIDP+LANAFRRILIAEVPTMAIEKV
Sbjct: 61  SMGVDNSLRLDYFRNNFKIEVIDLGEDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKV 120

Query: 412 LVANNTSIVQDEVLAHRLGLIPIRVDPRLFEYSDKDTPNEKNTIVFRLHVRCERGKPRLT 471
           LVANNTS++QDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNTIVFRLH RCERGKPRLT
Sbjct: 121 LVANNTSLIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLT 180

Query: 472 ATSKALTWLPNGSEFPLVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILAR 531
            TSK LTWLPNGSEFPLVSDKSV N+KPKTYTSFSCSQDTLPEF+NN IGPKD DII+AR
Sbjct: 181 VTSKLLTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNSIGPKDNDIIIAR 240

Query: 532 LSSGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKNKCPVNV 591
           L  GQEIELEAHAVKGMGKTHAKWSPVATAWY+MLPEVVL E+IEDELAEELK KCPV+V
Sbjct: 241 LGPGQEIELEAHAVKGMGKTHAKWSPVATAWYKMLPEVVLSEEIEDELAEELKKKCPVDV 300

Query: 592 FDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEV 651
           FDIEDIANGKKRA VARPR+CTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEV
Sbjct: 301 FDIEDIANGKKRAIVARPRSCTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEV 360

Query: 652 LFTEAVKILEDKCERLIAELS 672
           LFTEAVKILEDKCERLIAELS
Sbjct: 361 LFTEAVKILEDKCERLIAELS 380

[Close]

BLAST of Csor.00g206020 vs. TAIR 10
Match: AT1G60620.1 (RNA polymerase I subunit 43 )

HSP 1 Score: 506.1 bits (1302), Expect = 4.2e-143
Identity = 251/365 (68.77%), Postives = 296/365 (81.10%), Query Frame = 0


Query: 310 IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAYASLGIDNSLRLDSFRKNFK 369
           I +LPDVP  LPPH+ELQRTRV CK D+ IH   I +SGAY+S+G+DNS+RL++F ++FK
Sbjct: 23  IFDLPDVPTGLPPHLELQRTRVVCKKDSNIHPTAITFSGAYSSMGVDNSVRLENFSEDFK 82

Query: 370 IEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRL 429
           ++VI L E DM FDMIG+   +ANAFRRIL+AE+P+MAIEKV VANNTS++QDEVLAHRL
Sbjct: 83  VDVISLTETDMVFDMIGVHAGIANAFRRILLAELPSMAIEKVYVANNTSVIQDEVLAHRL 142

Query: 430 GLIPIRVDPRLFEY-SDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFPL 489
           GLIPI  DPRLFEY S+ D PNEKNTIVF+LHV+C +G PR    +  L WLPNGSE  L
Sbjct: 143 GLIPIAADPRLFEYLSENDQPNEKNTIVFKLHVKCLKGDPRRKVLTSELKWLPNGSE--L 202

Query: 490 VSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKGM 549
           + +   S T PKTYTSF+ SQD+ PEFA NPI P   DI++A+L  GQEIELEAHAVKG+
Sbjct: 203 IKESGGSTTTPKTYTSFNHSQDSFPEFAENPIRPTLKDILIAKLGPGQEIELEAHAVKGI 262

Query: 550 GKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVAR 609
           GKTHAKWSPVATAWYRMLPEVVLL++ E + AEEL   CP  VFDIED+  G+KRATVAR
Sbjct: 263 GKTHAKWSPVATAWYRMLPEVVLLKEFEGKHAEELVKVCPKKVFDIEDMGQGRKRATVAR 322

Query: 610 PRACTLCRECIR-GEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERL 669
           PR C+LCRECIR G  WE +V LRRVK+HFIF IESTG+ PPEVLF EAVKILEDKCER+
Sbjct: 323 PRDCSLCRECIRDGVEWEDQVDLRRVKNHFIFTIESTGSQPPEVLFNEAVKILEDKCERV 382

Query: 670 IAELS 673
           I+ELS
Sbjct: 383 ISELS 385

[Close]

BLAST of Csor.00g206020 vs. TAIR 10
Match: AT1G60850.2 (DNA-directed RNA polymerase family protein )

HSP 1 Score: 474.9 bits (1221), Expect = 1.0e-133
Identity = 238/360 (66.11%), Postives = 285/360 (79.17%), Query Frame = 0


Query: 310 IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAY-ASLGIDNSLRLDSFRKNF 369
           I +LPDVP  LPPH++ Q+TRV  K +AP HT +  YSG Y +S   D++++L +F  NF
Sbjct: 15  IDDLPDVPAGLPPHLKAQQTRVVSKNNAPAHTASAIYSGTYVSSTEEDDNVKLGNFYDNF 74

Query: 370 KIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHR 429
           K++V+ L + DMEFDMIGID + ANAFRRILIAEVP+MAIEKVL+A NTS++ DEVLAHR
Sbjct: 75  KVDVVSLTKTDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIAYNTSVIIDEVLAHR 134

Query: 430 LGLIPIRVDPRLFEY-SDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFP 489
           +GLIPI  DPRLFEY S+ D  NEKNTIVF+LHV+C + +PRL   +  L WLPNGSE  
Sbjct: 135 MGLIPIAADPRLFEYLSEHDQANEKNTIVFKLHVKCPKNRPRLKVLTSDLKWLPNGSE-- 194

Query: 490 LVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKG 549
           L+ +     +KPKTYTSFSCSQD+LPEFANNPI P D DI++A+L+ GQEIELEAHAVKG
Sbjct: 195 LLRESENKTSKPKTYTSFSCSQDSLPEFANNPITPCDLDILIAKLAPGQEIELEAHAVKG 254

Query: 550 MGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVA 609
           +GKTHAKWSPV TAWYRM PEVVL  ++EDELAE L N CP NVFDIED+  GKKRATVA
Sbjct: 255 IGKTHAKWSPVGTAWYRMHPEVVLRGEVEDELAERLVNVCPQNVFDIEDMGKGKKRATVA 314

Query: 610 RPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERL 668
           +PR CTLC+EC+R +     V L  VK+HFIF IESTG+LPPEVLFTEAVKILE KCE +
Sbjct: 315 QPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAKCEAI 372

[Close]

BLAST of Csor.00g206020 vs. TAIR 10
Match: AT1G60850.1 (DNA-directed RNA polymerase family protein )

HSP 1 Score: 474.9 bits (1221), Expect = 1.0e-133
Identity = 238/360 (66.11%), Postives = 285/360 (79.17%), Query Frame = 0


Query: 310 IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAY-ASLGIDNSLRLDSFRKNF 369
           I +LPDVP  LPPH++ Q+TRV  K +AP HT +  YSG Y +S   D++++L +F  NF
Sbjct: 15  IDDLPDVPAGLPPHLKAQQTRVVSKNNAPAHTASAIYSGTYVSSTEEDDNVKLGNFYDNF 74

Query: 370 KIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHR 429
           K++V+ L + DMEFDMIGID + ANAFRRILIAEVP+MAIEKVL+A NTS++ DEVLAHR
Sbjct: 75  KVDVVSLTKTDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIAYNTSVIIDEVLAHR 134

Query: 430 LGLIPIRVDPRLFEY-SDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFP 489
           +GLIPI  DPRLFEY S+ D  NEKNTIVF+LHV+C + +PRL   +  L WLPNGSE  
Sbjct: 135 MGLIPIAADPRLFEYLSEHDQANEKNTIVFKLHVKCPKNRPRLKVLTSDLKWLPNGSE-- 194

Query: 490 LVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKG 549
           L+ +     +KPKTYTSFSCSQD+LPEFANNPI P D DI++A+L+ GQEIELEAHAVKG
Sbjct: 195 LLRESENKTSKPKTYTSFSCSQDSLPEFANNPITPCDLDILIAKLAPGQEIELEAHAVKG 254

Query: 550 MGKTHAKWSPVATAWYRMLPEVVLLEDIEDELAEELKNKCPVNVFDIEDIANGKKRATVA 609
           +GKTHAKWSPV TAWYRM PEVVL  ++EDELAE L N CP NVFDIED+  GKKRATVA
Sbjct: 255 IGKTHAKWSPVGTAWYRMHPEVVLRGEVEDELAERLVNVCPQNVFDIEDMGKGKKRATVA 314

Query: 610 RPRACTLCRECIRGEAWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERL 668
           +PR CTLC+EC+R +     V L  VK+HFIF IESTG+LPPEVLFTEAVKILE KCE +
Sbjct: 315 QPRKCTLCKECVRDDDLVDHVDLGSVKNHFIFNIESTGSLPPEVLFTEAVKILEAKCEAI 372

[Close]

BLAST of Csor.00g206020 vs. TAIR 10
Match: AT1G60850.3 (DNA-directed RNA polymerase family protein )

HSP 1 Score: 341.3 bits (874), Expect = 1.8e-93
Identity = 171/262 (65.27%), Postives = 208/262 (79.39%), Query Frame = 0


Query: 310 IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAY-ASLGIDNSLRLDSFRKNF 369
           I +LPDVP  LPPH++ Q+TRV  K +AP HT +  YSG Y +S   D++++L +F  NF
Sbjct: 15  IDDLPDVPAGLPPHLKAQQTRVVSKNNAPAHTASAIYSGTYVSSTEEDDNVKLGNFYDNF 74

Query: 370 KIEVIDLKEDDMEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHR 429
           K++V+ L + DMEFDMIGID + ANAFRRILIAEVP+MAIEKVL+A NTS++ DEVLAHR
Sbjct: 75  KVDVVSLTKTDMEFDMIGIDAAFANAFRRILIAEVPSMAIEKVLIAYNTSVIIDEVLAHR 134

Query: 430 LGLIPIRVDPRLFEY-SDKDTPNEKNTIVFRLHVRCERGKPRLTATSKALTWLPNGSEFP 489
           +GLIPI  DPRLFEY S+ D  NEKNTIVF+LHV+C + +PRL   +  L WLPNGSE  
Sbjct: 135 MGLIPIAADPRLFEYLSEHDQANEKNTIVFKLHVKCPKNRPRLKVLTSDLKWLPNGSE-- 194

Query: 490 LVSDKSVSNTKPKTYTSFSCSQDTLPEFANNPIGPKDGDIILARLSSGQEIELEAHAVKG 549
           L+ +     +KPKTYTSFSCSQD+LPEFANNPI P D DI++A+L+ GQEIELEAHAVKG
Sbjct: 195 LLRESENKTSKPKTYTSFSCSQDSLPEFANNPITPCDLDILIAKLAPGQEIELEAHAVKG 254

Query: 550 MGKTHAKWSPVATAWYRMLPEV 570
           +GKTHAKWSPV TAWYRM PEV
Sbjct: 255 IGKTHAKWSPVGTAWYRMHPEV 274

[Close]

BLAST of Csor.00g206020 vs. TAIR 10
Match: AT3G13200.1 (Cwf15 / Cwc15 cell cycle control family protein )

HSP 1 Score: 279.6 bits (714), Expect = 6.4e-75
Identity = 154/204 (75.49%), Postives = 182/204 (89.22%), Query Frame = 0


Query: 29  AEETRKKDIASHTTLKPRKEGQDTHDELQRRNLRDELEDRERRHFSSKNKSY-DDRDHRK 88
           +++   +D+A+HTTLKPR+EGQ T +ELQ+ NLRDELE+RERRHFSSK+KSY DDRD R+
Sbjct: 27  SQKYSSRDVAAHTTLKPRREGQHTQEELQKINLRDELEERERRHFSSKDKSYNDDRDRRR 86

Query: 89  GSQLLLEGGKRDIEDRIIPRSLDADDSDVDVKSDNESDDDEDDDDEDDTEALLAELEQIK 148
           GSQLLLE  KRD E+RIIPRS+DADDSDVD+KSD++SDD+ DDDDEDDTEAL+AEL+QIK
Sbjct: 87  GSQLLLEDSKRDPEERIIPRSVDADDSDVDIKSDDDSDDESDDDDEDDTEALMAELDQIK 146

Query: 149 KERAEEKLRKERQEREEELKVKEAELLRGNPLLNEQPASFSVKRRWDDDVVFKNQARGET 208
           KER EE+LRKE++++ EEL  KE ELL+GNPLLN  P SFSVKRRWDDDVVFKNQARGE 
Sbjct: 147 KERVEERLRKEKEQQMEELNAKEEELLKGNPLLN-TPTSFSVKRRWDDDVVFKNQARGEM 206

Query: 209 KTPKRFINDTIRNDFHRKFLHKYL 232
           K PKRFINDTIRNDFHRKFLH+Y+
Sbjct: 207 KAPKRFINDTIRNDFHRKFLHRYM 229

The following BLAST results are available for this feature:

BLAST of Csor.00g206020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q32L22	2.5e-79	48.57	DNA-directed RNA polymerases I and III subunit RPAC1 OS=Bos taurus OX=9913 GN=PO...	[more]
P52432	3.5e-78	48.29	DNA-directed RNA polymerases I and III subunit RPAC1 OS=Mus musculus OX=10090 GN...	[more]
O15160	4.6e-78	47.43	DNA-directed RNA polymerases I and III subunit RPAC1 OS=Homo sapiens OX=9606 GN=...	[more]
Q54SN4	2.2e-72	42.90	DNA-directed RNA polymerases I and III subunit rpac1 OS=Dictyostelium discoideum...	[more]
O94616	2.4e-66	39.44	DNA-directed RNA polymerases I and III subunit RPAC1 OS=Schizosaccharomyces pomb...	[more]

BLAST of Csor.00g206020 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6596753.1	0.0	100.00	DNA-directed RNA polymerases I and III subunit RPAC1, partial [Cucurbita argyros...	[more]
XP_022936430.1	1.60e-280	100.00	DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita moschata] >XP_02...	[more]
XP_023540473.1	3.74e-279	99.49	DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita pepo subsp. pepo...	[more]
XP_023005438.1	2.50e-277	98.72	DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita maxima]	[more]
KAG7028290.1	6.88e-277	99.49	DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita argyrosperma sub...	[more]

BLAST of Csor.00g206020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FDA3	7.75e-281	100.00	DNA-directed RNA polymerases I and III subunit RPAC1 OS=Cucurbita moschata OX=36...	[more]
A0A6J1L269	1.21e-277	98.72	DNA-directed RNA polymerases I and III subunit RPAC1 OS=Cucurbita maxima OX=3661...	[more]
A0A0A0L637	3.12e-254	91.07	DNA-directed RNA polymerases I and III subunit RPAC1 OS=Cucumis sativus OX=3659 ...	[more]
A0A1S4DX61	1.38e-250	89.80	DNA-directed RNA polymerases I and III subunit RPAC1 OS=Cucumis melo OX=3656 GN=...	[more]
A0A6J1DXI7	1.74e-248	90.81	DNA-directed RNA polymerases I and III subunit RPAC1 OS=Momordica charantia OX=3...	[more]

BLAST of Csor.00g206020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G60620.1	4.2e-143	68.77	RNA polymerase I subunit 43	[more]
AT1G60850.2	1.0e-133	66.11	DNA-directed RNA polymerase family protein	[more]
AT1G60850.1	1.0e-133	66.11	DNA-directed RNA polymerase family protein	[more]
AT1G60850.3	1.8e-93	65.27	DNA-directed RNA polymerase family protein	[more]
AT3G13200.1	6.4e-75	75.49	Cwf15 / Cwc15 cell cycle control family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 136..172
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..115
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..135
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..135
None	No IPR available	PANTHER	PTHR11800:SF14	BNAA01G22480D PROTEIN	coord: 305..672
None	No IPR available	PANTHER	PTHR11800	DNA-DIRECTED RNA POLYMERASE	coord: 305..672
IPR011263	DNA-directed RNA polymerase, RpoA/D/Rpb3-type	SMART	SM00662	rpoldneu2	coord: 379..670 e-value: 6.4E-110 score: 381.2
IPR011263	DNA-directed RNA polymerase, RpoA/D/Rpb3-type	PFAM	PF01193	RNA_pol_L	coord: 381..664 e-value: 4.4E-26 score: 91.8
IPR006973	Pre-mRNA-splicing factor Cwf15/Cwc15	PFAM	PF04889	Cwf_Cwc_15	coord: 26..231 e-value: 1.2E-61 score: 208.7
IPR036603	RNA polymerase, RBP11-like subunit	GENE3D	3.30.1360.10		coord: 370..663 e-value: 2.8E-106 score: 356.9
IPR036603	RNA polymerase, RBP11-like subunit	SUPERFAMILY	55257	RBP11-like subunits of RNA polymerase	coord: 366..671
IPR011262	DNA-directed RNA polymerase, insert domain	PFAM	PF01000	RNA_pol_A_bac	coord: 412..556 e-value: 1.5E-21 score: 76.9
IPR036643	DNA-directed RNA polymerase, insert domain superfamily	GENE3D	2.170.120.12		coord: 405..553 e-value: 2.8E-106 score: 356.9
IPR036643	DNA-directed RNA polymerase, insert domain superfamily	SUPERFAMILY	56553	Insert subdomain of RNA polymerase alpha subunit	coord: 404..557
IPR001514	DNA-directed RNA polymerase, 30-40kDa subunit, conserved site	PROSITE	PS00446	RNA_POL_D_30KD	coord: 393..433
IPR033901	DNA-directed RNA polymerases I and III subunit AC40	CDD	cd07032	RNAP_I_II_AC40	coord: 368..670 e-value: 5.78421E-150 score: 434.329

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g206020.m01	Csor.00g206020.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0006360	transcription by RNA polymerase I
biological_process	GO:0006383	transcription by RNA polymerase III
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005736	RNA polymerase I complex
cellular_component	GO:0005666	RNA polymerase III complex
cellular_component	GO:0005681	spliceosomal complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0001054	RNA polymerase I activity
molecular_function	GO:0001056	RNA polymerase III activity
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity