Csor.00g205020 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g205020
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like
LocationCsor_Chr06: 4230734 .. 4236935 (-)
RNA-Seq ExpressionCsor.00g205020
SyntenyCsor.00g205020
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGGCAGACTGAGCAATTTGGGTTCAAAGGTCCTTGGCGGAAATGGCGTTGTTGGTCGCTCAATCGCTTCATCTCTTCGCCTTCGCTCCGGCATGGGCCTTCCCGTTGGAAAACACATCGTCCCCGATAAGCCCGTAAGCATTTCACTCTTCGACCCCCCAAATTTATTGCTAATCAATGATCCTTTGACTCAGATTTTGCGGGATCAATAATTTTTTCCTCTTTTTTTAGCTTCCTGTAAACGACGAACTGGTTTGGGATAATGGAACTCCTTTTCCTGAGCCCTGTATTGATCGCATTGCAGATACGGTTGGGAAGGTGTGTAGGTTCTCTTCAGGATTTTGTATTTTATCCTGTTTTTCTTCTTATGCTTCTCTCTTTTTCAGTACGAAGCCTTGGGTTGGTTATGTGGGGGATTGGGATTCTTTGCATCTCTGGGATTGTTGGCTGTGTGGAACGACAAAGCGTCTAGGATTCCATTTGTAAGTTTACTGAACTGTACTTCTCTGTTGGATTTGTTTGAGATCTCACCTGCATATGTGATTGACTGTTGGGGGAAAATCTATCGTTCATTGTCATGCATATTGTGTAATTTGACGGTGCCCAGTTCAGTGCATCACTCACAGTGAAGTGTTTGTTCTCATGTAATCTTTGTGCTTATTGTTCTTTGTATATAGCATTTTGTTTCTTTGATTTAGGGCTCGAAACATGGGCTGAGCTAGAGAAATAACTCTTAAGATGACTAACTAGAAACAAGCATTGTATTAAAAGGAGAAATAAAGGGTGGAATAACCTAGGGGCCTGGGGTGAGGGAGACCTCGCCGAGAACCAGTTGAAAGAATGCTTTTCGATTGTTAAAGATTGTTGTAAGGTTGTAATTACATAAGAATTTCCTGTGACTATACCCCCAATTAAAAGCAATAAGCTGTACACTTCTAAAACAAACTCAAAAGAAGAAGACTTTTCTTCTATGATCATCTGGTTTCTTTCTAGCCAAATGTGCCGTAATAGTGCCCTAACCGCACAAGACCATAAAATGTTCGCCCTTTTGGACATTTTCCACTCGAATAAAACTTCTAGGAGCCGCCTGTGTGTAGGTCTCGACAAACAACCACTCACCCCAAAGATAAGATGTTCACAACGGAGAAGCAATCTTTGTTCTTTGCATATAACATTTTATTTCTTTGATTTAGGGTTGGATGGCTAATTTATAATGTGATGCAATGCAAACAATTGTTTAGATTAATTTTATCCTATGACTCTTGAGCTAGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTATGTGTGGAGTGGGGTGGGGGGTAAGAAATCGGGCTTTCATTGAAAAAAGTGAAAAAATCTACGAGGACAACAAAAGAAACAAAGCCAAACAAACAAAGGAGTCTAGTAGTCTACAAGGATTATAAAAAAAAAATATCTTGAGAGGTGGTCAGATTAAAGAAGTTCCAAATAAGGAGTGTGGTAGAAAGGAATAAAGGATGGAAAAAAAAAAAGAAAGACGGAAGTGGAAATCAATATTTCAATAAAATAGGTTGGGTAAAAATGATAATCATTACCAAATGTTGTTTTCGTGATGATTGGTTTGATTTTCTCGAAACTTTGAAGAATGAAGGAGAAAAATCAACGAGAATTTCATTCAAAATCCTACTAATGCTGCGTGCGATTGCTCTATTAAAATGTAATGTTGGAGGGTTAGTAGATAGTTTATGTGCCTTTGCTGGGTGTGTGGAGGCAGAAGATTTTGTGGTGAAGTTAAAAGATATAAAAAGAAGTCTTAGTGAAAGATTTGTATAAATATATATGTATATATATAGAAAGAAGATTCATGGTAGAGCACAAGTTATACCTTTGTCGTGGAGTGCAGATTAAATCCGGAGGCTTACCAATTGTTATATGGAAGGAGGTTATATTATAACCATTGGAGAGAAGTGTGGAGGATTCCTGTGTTGTGCAAAGAAAACATTTGACATTGAAGTTTGCTTGAAAACATGCATAGAAGTTCAAAAGAAATTTTGTGGATTCATCCTTTGTTAATTTAAAGATCCTCATTATGATTCTTTTGTTAATCTCTTTGCATGGCCAGTACCCTTCTTTTCTTCTTTGCCCACATTTTGTACAATTCTCTTTCCTTAGTTTTTCCTTTTGCTTCAAGCACGTGGGGTTGCTATTGGTAGACTCTTGGTATTTTGATGGTCTAGGGTGTAGATCACCGCTGATTCAAAAGGTTATGTTGATAGATTATGATATAAAATATTTTATTCATATTCTTACGACTCTTCCTTACTTGTGGGCTTGAAAATTAGTATGAAGCCCAGTAAGTAACTATTAATATCATTCGGAGAAAAAAATGACATTAGAGACTTTAAATACCTGATCTTTGTTGTGATGCCATATTGAAACATCACTAGACTGGACCCAAAAGTTTGAGTTGATAGGTTATGATGTGTTTATTTTATTCATATTCTTAACGTAGAGAAGTATTCTTCGTTGGATGTTGGCGAAAATCATCTTGAATCTACCCTTTGGGAATAAAAGACATGTTTGAGGCTAGCCTGGCCAATTCCCTCACCGTCATTTTTGGTTAATATCATAATATGATTGGAAAGAAATAGATCCTTTTTGGGGCTTATGAAATTTACAACGAAGAGACAACCCCAACTCAAAAGAGTTACAATAAACATCTTCACTTGAAAAAACGAGAAGAAAATCGGTAAGAATGGAAAAGCATTTGTAATTTACTCCAAGATATAGCTAGGTAGATGACACTATCAAGGAATCTATAATAATTACAATCTTTTCCCACAAAAATCCATTGATTTCTCTCCAACCAAGTAGACCAAAAGAAGGGCTGAATGAGGTGTGCTTTCTTGAAAGGATGATCCACGAGAGGAAGAGAAAGAAGAGCTTTGGGTCCTTTTGAAGAGCCATGGACCAGTGGAAGGAGGATAACATCTCAATTCAAAACCTAGATGCAAAAGAAGTGGAAAATAAATGGCTTTGTGATTCATCTTTTCTGCAAAGGATGCACCAATTTGGGAGAGAACCATATATGGTTACTGCCCGTTGCAATTTTTCAAGAGTATTTATGACATGATGACAAAGCATCCAAAGGAAAATTTTGCTCTGTTTGGGTAAATATCATTTCAGATCGCCTCTGATCACAAGAAAAGATCTCCTTCTAACATTGGACCCAAAGCCAGCAGCAAGGATCTGATAGAAAATTAGCCCACTGCAAGGTTTTCCCTTACTATAACACTTCTTCACTTTCTAAAAGTTCAATACACAAGGGCATCCACCAGTTCGAGAAGGTGGTGATCTCTCCTTACAGCTGTATAACGCAGGTTGACTATACAAAATATAACACTGCAAGCCCCAATCCCACAGATACAGAATATACTTATTTCCCTCTTTACCCCTTTTAACTTAAGTATTAACTATTGGGGGTCTCACACCTCATATCTTCAGATTGAGTTAAATGAATAAAAGACAGCAAGTGGTTCATGTTAGCCCCGTTAGAATTTCCTCATCTTTCAGCATAAGTCCCAAAATTAATCCGAGGGCTTCCAATTGTCTTTTAAAGAAGCATATGTTTGGTCAGAGATAGAGTCGAGTCGAGGAAAAATTTCTTCCAAACAAGCTTCTTGAGGCCATCTTTTTTGGGGGTTTAAATAGGTCTTTGATTGGAAAGAAATAGATTGCTTTTTTGAGGTTCAAGTATGTCCTTGATTAGAAGAAAGATTTTTTCTGTGTTTTTAAGTAAGTTTTCGAAAGAGATGTACTGTTTGACATATTTTAATGACTTCTTTTGCATTTATAATCAAATCGTTCTTTCTAACTTCCATTTATCTTTGATTATTAATATTTAGAGATCTTTTTTGCATTTTTTTTTTCAATTTCATTTGGCCTACGTCCTTTTGTTTTGTTTGCACTTTCATTTATCTTAATAAAAGCTGGTACTCTGGTTGAAAAGGAGAAAAGTTAACCTCCCCTTGAAGAACTTCTGCTTCATTAGCACATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATATAAAGAAACAACATTTGATTGAGTATAATGAATATGCAAACAAAAGAAAGGGGTTATTGAAAAACTAGCCCTTTATGAAGGTCCATCCTCACTTATGGAGGAATGCACTCCAATCCAAAAGAATGAATCCTAATGGTTAATTGCAAAGCTCCCTAGAGCTAAACCCCCTGGAGGAACGTGAAACTTTACATTATTCCACCCCTCTTCTCGAGATCTCTCAAAACCTCTGAAACTTGTACAAATTTTCTCTAGGCATTTTCCACAAATCAGAACAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAAAAAGAGCATGCCAATGGGTTCTACCTTTATCTCGAAAAGGAGGACTCAAGAGAACTTCCTCCATACTTAGAGCAACAATTTCTATTTCGCATTTAACAGATCTGAAATAACCCCACAAATTCATTTGGGATCTTGCAAATCCACTCCTTTTCCTATTCAAAGTTCAATCTTTTGTCTATGTGTTTTCACATCAAGAATTCTTTGCAGATGAAGAGATGTCAAAGGGGCTGCTTACTTCCCAAACAGATGCTCCTACATCTATATATAAACGTTGGTTTATCAAAAATATGTAAGAAAAACACCTCGGATTGTGGATTGTTGATTCATTGCTAGAGATGACTTAGAATCAATAGAACTATTATCTAATGGCTTTTTCCATTCTAATACTCCATCCAAGAAAATCTTTTTCTCAACAATGTTGGTCCAAAGTAAGTTAGCATTGAAAACACAGGATATGGTTAAGGTTCTCAGAAGCCTGTCTATATAAGATACGAAGTACAGAACAAGAAGGAAGAATGCCTCTAAGTATGATCCAGGATATTTACTTTTCCAAGTAAGATTTGCCACTAAAAAATATGGGCTTCCTAGGACCTTAACCTTTCAGAGAGGCAACACAGTGGAATTAAGGGAGACGAAGGTACACAAAGGACGTGGAAATAAGAACTGCAAGAGAAGGTTGTTGTCCAACTAAGATACTGAGAACTTAAAACCACTTTTAGCTGATATTGACATCTTCGGTGGTTGGGAAAACCGAAGCTAAAATCGAACCCACTACCAACCAACTCTTCCCATTTTTCCAACCATGAAGGCACAAGGTAAGAGTCTGACAAGAAAGGAGGAAATTTTATTGAAAATTTCATTCCTGTATTCATTTTTGTATTATTTCACCTGCGAACCTCACCGTAGATCTCCCCCATTGTATCAACCGTCCACATGGTGAAGCTAACCCTATGACCACCTTTTGAATGGAGGGAAACATCTATAGCAATGACCTGGCCTCTAGGAAATGCTAAATTGTGAACTTCAGCCACCAGCCTTGTGTCCCATAACTGCATTGACACGGCGATTTTCCACCCACCATATCTGAAGTTCATGGTCAAGGCCCTCCCCATGGATTAAAATGGTTAACTATAGCCATTCCCAATGACTTTTGCTAACCAAGCTTGATTCTAACGCACTTCACTATCTCTCTAATCTCTGTAATTCAATTGATCAACAACACTAACTCGTTCTTGGTCATCAGCTGAACTTTAGATGAATTAAAAGAAAAATTAACCTCCAAATTGTCCAAGATGATTCTCGTCTGTTCTTGCTTCTGCTGTGGATCTGGCATCCACAATCCTCCTGAGTGCTAGGCTGCTAGTAGCTAATCAGGTTTTGGAGTCGATATACTCCATCTCGATTTCAGATATATTCCTCCTAACTGCAATTTCCTCATTGTGACCAGCAATGACAAATGCTGAACTCCTTTGATTGAGCTACATTGCCAAGTCTTTGGAAGGTAAATTTGAGAGGGCTGCTACCTGTTCGGTTTTATATTCTTGTGTGGTTGTTTGTAGAGCCTGGCTTTGTATTCTTTAAGGTGGGTTCCATTCAATACGTTTGTTTTACCGTCTTGATGTTTGCATATTAATGAAGACTAAGAAGTGGTATACCGTTGTGAAGATGATAATAATAAATAAGTTCATCCCCATCCTTGTTTCAATCAGGCGCCGAAAGTGTATCCATATGACAACCTAAGAGTGGAGCTTGGTGGAGAAGCAGAAGCAGAAGCAGAAGCAGCATAG

mRNA sequence

ATGGCAGGCAGACTGAGCAATTTGGGTTCAAAGGTCCTTGGCGGAAATGGCGTTGTTGGTCGCTCAATCGCTTCATCTCTTCGCCTTCGCTCCGGCATGGGCCTTCCCGTTGGAAAACACATCGTCCCCGATAAGCCCCTTCCTGTAAACGACGAACTGGTTTGGGATAATGGAACTCCTTTTCCTGAGCCCTGTATTGATCGCATTGCAGATACGGTTGGGAAGTACGAAGCCTTGGGTTGGTTATGTGGGGGATTGGGATTCTTTGCATCTCTGGGATTGTTGGCTGTGTGGAACGACAAAGCGTCTAGGATTCCATTTGCGCCGAAAGTGTATCCATATGACAACCTAAGAGTGGAGCTTGGTGGAGAAGCAGAAGCAGAAGCAGAAGCAGCATAG

Coding sequence (CDS)

ATGGCAGGCAGACTGAGCAATTTGGGTTCAAAGGTCCTTGGCGGAAATGGCGTTGTTGGTCGCTCAATCGCTTCATCTCTTCGCCTTCGCTCCGGCATGGGCCTTCCCGTTGGAAAACACATCGTCCCCGATAAGCCCCTTCCTGTAAACGACGAACTGGTTTGGGATAATGGAACTCCTTTTCCTGAGCCCTGTATTGATCGCATTGCAGATACGGTTGGGAAGTACGAAGCCTTGGGTTGGTTATGTGGGGGATTGGGATTCTTTGCATCTCTGGGATTGTTGGCTGTGTGGAACGACAAAGCGTCTAGGATTCCATTTGCGCCGAAAGTGTATCCATATGACAACCTAAGAGTGGAGCTTGGTGGAGAAGCAGAAGCAGAAGCAGAAGCAGCATAG

Protein sequence

MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTPFPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWNDKASRIPFAPKVYPYDNLRVELGGEAEAEAEAA
Homology
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BLAST of Csor.00g205020 vs. ExPASy Swiss-Prot
Match: Q9FGK0 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g47570 PE=2 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 3.7e-56
Identity = 101/124 (81.45%), Postives = 111/124 (89.52%), Query Frame = 0 

Query: 1   MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60
           MAGRLS + S+++GGNGVV RS+ SSLR R+GMGLPVGKHIVPDKPL VNDEL+WDNGT 
Sbjct: 1   MAGRLSGVASRIMGGNGVVARSVGSSLRQRAGMGLPVGKHIVPDKPLSVNDELMWDNGTA 60

Query: 61  FPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWNDKASRIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEAL WL GGLGFF  LGLLAV NDKAS++PF P+VYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLSGGLGFFVGLGLLAVLNDKASKVPFTPRVYPYDNLRVE 120

Query: 121 LGGE 125
           LGGE
Sbjct: 121 LGGE 124

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BLAST of Csor.00g205020 vs. NCBI nr
Match: XP_022950674.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like [Cucurbita moschata] >XP_023538880.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like [Cucurbita pepo subsp. pepo] >KAG6596853.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 271 bits (692), Expect = 1.30e-91
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 1   MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60
           MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP
Sbjct: 1   MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWNDKASRIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWNDKASRIPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWNDKASRIPFAPKVYPYDNLRVE 120

Query: 121 LGGEAEAEAEAA 132
           LGGEAEAEAEAA
Sbjct: 121 LGGEAEAEAEAA 132

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BLAST of Csor.00g205020 vs. NCBI nr
Match: XP_023005602.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 265 bits (677), Expect = 2.37e-89
Identity = 128/129 (99.22%), Postives = 129/129 (100.00%), Query Frame = 0 

Query: 1   MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60
           MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP
Sbjct: 1   MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWNDKASRIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWNDKASRIPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWNDKASRIPFAPKVYPYDNLRVE 120

Query: 121 LGGEAEAEA 129
           LGGEAEAE+
Sbjct: 121 LGGEAEAES 129

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BLAST of Csor.00g205020 vs. NCBI nr
Match: XP_038903151.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Benincasa hispida])

HSP 1 Score: 252 bits (644), Expect = 2.32e-84
Identity = 120/127 (94.49%), Postives = 123/127 (96.85%), Query Frame = 0 

Query: 1   MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60
           MAGRLSNL S++LGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP
Sbjct: 1   MAGRLSNLSSRILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWNDKASRIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEAL WLCGGLGFFASLG LAVWNDKAS+IPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGEAEA 127
           LGGE EA
Sbjct: 121 LGGEPEA 127

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BLAST of Csor.00g205020 vs. NCBI nr
Match: XP_004147198.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucumis sativus] >XP_008448866.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucumis melo] >KGN55877.1 hypothetical protein Csa_010471 [Cucumis sativus])

HSP 1 Score: 250 bits (638), Expect = 1.91e-83
Identity = 118/127 (92.91%), Postives = 123/127 (96.85%), Query Frame = 0 

Query: 1   MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60
           MAG+L+NLGSK+LGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLP NDELVWDNGTP
Sbjct: 1   MAGKLTNLGSKILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPENDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWNDKASRIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEAL WLCGGLGFFASLG LAVWNDKAS+IPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGEAEA 127
           LGG+ EA
Sbjct: 121 LGGDPEA 127

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BLAST of Csor.00g205020 vs. NCBI nr
Match: XP_022965223.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucurbita maxima])

HSP 1 Score: 248 bits (633), Expect = 1.10e-82
Identity = 118/127 (92.91%), Postives = 121/127 (95.28%), Query Frame = 0 

Query: 1   MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60
           MAGRLSNLGS++LGGNGVV RSI SSLR RSGMGLPVGKHIVPDKPLPVNDELVWDNGTP
Sbjct: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRCRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWNDKASRIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEAL WLCGGLGFFASLG LAVWNDKAS+IPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGEAEA 127
           LGGE EA
Sbjct: 121 LGGEPEA 127

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BLAST of Csor.00g205020 vs. ExPASy TrEMBL
Match: A0A6J1GGJ2 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111453696 PE=4 SV=1)

HSP 1 Score: 271 bits (692), Expect = 6.32e-92
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 1   MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60
           MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP
Sbjct: 1   MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWNDKASRIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWNDKASRIPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWNDKASRIPFAPKVYPYDNLRVE 120

Query: 121 LGGEAEAEAEAA 132
           LGGEAEAEAEAA
Sbjct: 121 LGGEAEAEAEAA 132

[Close]
BLAST of Csor.00g205020 vs. ExPASy TrEMBL
Match: A0A6J1KTK9 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111498540 PE=4 SV=1)

HSP 1 Score: 265 bits (677), Expect = 1.15e-89
Identity = 128/129 (99.22%), Postives = 129/129 (100.00%), Query Frame = 0 

Query: 1   MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60
           MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP
Sbjct: 1   MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWNDKASRIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWNDKASRIPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWNDKASRIPFAPKVYPYDNLRVE 120

Query: 121 LGGEAEAEA 129
           LGGEAEAE+
Sbjct: 121 LGGEAEAES 129

[Close]
BLAST of Csor.00g205020 vs. ExPASy TrEMBL
Match: A0A0A0L5J8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G021140 PE=4 SV=1)

HSP 1 Score: 250 bits (638), Expect = 9.23e-84
Identity = 118/127 (92.91%), Postives = 123/127 (96.85%), Query Frame = 0 

Query: 1   MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60
           MAG+L+NLGSK+LGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLP NDELVWDNGTP
Sbjct: 1   MAGKLTNLGSKILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPENDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWNDKASRIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEAL WLCGGLGFFASLG LAVWNDKAS+IPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGEAEA 127
           LGG+ EA
Sbjct: 121 LGGDPEA 127

[Close]
BLAST of Csor.00g205020 vs. ExPASy TrEMBL
Match: A0A1S3BK37 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103490900 PE=4 SV=1)

HSP 1 Score: 250 bits (638), Expect = 9.23e-84
Identity = 118/127 (92.91%), Postives = 123/127 (96.85%), Query Frame = 0 

Query: 1   MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60
           MAG+L+NLGSK+LGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLP NDELVWDNGTP
Sbjct: 1   MAGKLTNLGSKILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPENDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWNDKASRIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEAL WLCGGLGFFASLG LAVWNDKAS+IPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGEAEA 127
           LGG+ EA
Sbjct: 121 LGGDPEA 127

[Close]
BLAST of Csor.00g205020 vs. ExPASy TrEMBL
Match: A0A6J1HN93 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111465142 PE=4 SV=1)

HSP 1 Score: 248 bits (633), Expect = 5.34e-83
Identity = 118/127 (92.91%), Postives = 121/127 (95.28%), Query Frame = 0 

Query: 1   MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60
           MAGRLSNLGS++LGGNGVV RSI SSLR RSGMGLPVGKHIVPDKPLPVNDELVWDNGTP
Sbjct: 1   MAGRLSNLGSRILGGNGVVARSIDSSLRCRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60

Query: 61  FPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWNDKASRIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEAL WLCGGLGFFASLG LAVWNDKAS+IPFAPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 121 LGGEAEA 127
           LGGE EA
Sbjct: 121 LGGEPEA 127

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BLAST of Csor.00g205020 vs. TAIR 10
Match: AT5G47570.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 218.8 bits (556), Expect = 2.6e-57
Identity = 101/124 (81.45%), Postives = 111/124 (89.52%), Query Frame = 0 

Query: 1   MAGRLSNLGSKVLGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPVNDELVWDNGTP 60
           MAGRLS + S+++GGNGVV RS+ SSLR R+GMGLPVGKHIVPDKPL VNDEL+WDNGT 
Sbjct: 1   MAGRLSGVASRIMGGNGVVARSVGSSLRQRAGMGLPVGKHIVPDKPLSVNDELMWDNGTA 60

Query: 61  FPEPCIDRIADTVGKYEALGWLCGGLGFFASLGLLAVWNDKASRIPFAPKVYPYDNLRVE 120
           FPEPCIDRIADTVGKYEAL WL GGLGFF  LGLLAV NDKAS++PF P+VYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLSGGLGFFVGLGLLAVLNDKASKVPFTPRVYPYDNLRVE 120

Query: 121 LGGE 125
           LGGE
Sbjct: 121 LGGE 124

The following BLAST results are available for this feature:
BLAST of Csor.00g205020 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FGK03.7e-5681.45NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Ar... [more]
BLAST of Csor.00g205020 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022950674.11.30e-91100.00NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like ... [more]
XP_023005602.12.37e-8999.22NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like ... [more]
XP_038903151.12.32e-8494.49NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Beni... [more]
XP_004147198.11.91e-8392.91NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucu... [more]
XP_022965223.11.10e-8292.91NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Cucu... [more]
BLAST of Csor.00g205020 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GGJ26.32e-92100.00NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like ... [more]
A0A6J1KTK91.15e-8999.22NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial-like ... [more]
A0A0A0L5J89.23e-8492.91Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G021140 PE=4 SV=1[more]
A0A1S3BK379.23e-8492.91NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Cu... [more]
A0A6J1HN935.34e-8392.91NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial OS=Cu... [more]
BLAST of Csor.00g205020 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G47570.12.6e-5781.45unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36401:SF2BNAC02G33360D PROTEINcoord: 1..124
IPR038863Putative NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrialPANTHERPTHR36401NADH DEHYDROGENASE [UBIQUINONE] 1 BETA SUBCOMPLEX SUBUNIT 8, MITOCHONDRIALcoord: 1..124

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g205020.m01Csor.00g205020.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane