Csor.00g204950 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGACCATTCCGATGATTTACACGAACTTCTTGACAGTATGCCTTCAAACTTCATGCAATACGTAGTGGGTTTCCGTTTCTTTAACGTTTTTCTTCATGTTTGTTATGAATTTGTCTCGGATTGTCTCAGGTGCTTTGGACGATTTTCAGAAAATCGACCTTAACCATTCCGTTTCGAGGTTTATATCAATCAATTTCTGTGTTGGAAGCTTTGTTTTGTAGCGTATTTAGTTGGATTCTTGATGTTTTTAGTTGTGTGGTGTTGTAGAAATGGAGATGGGGCGGAGAGTAGAGGGGCTCTTCCTTCTGGGGTTCAAGGTTTAGGGATGGGTTTGCCTGACTTGAGGAGCATGAAAAAAGGGAAGCAGAAGGTTTCGAAGGAATCGCATGTGTCTGAGGCTCTTGATAAGCTTAGAGAACAGACCAGAGAGGCCGTCAAGGGGCTTGAATCGGTCACTGGCCCTAAAGCTGGTGGTGATGATTTTGGTCAAGATGCTTTGATGGAAGATTGGGTGAAGCAGTTCGCGGAGATGGCTGGCTCTCAGGTACATTGCTTGAAAAGCCTTTGGAACTTTTCAACGTTGAATTTGGCCTTTAATGGAAATACTTTTCCTAGTTTTGATGCGGCTTGAACATAATAATTTTTGTTAGGAATCACGCCCCATTCGGTAGTGGTATGATATTGTCAATTTGAGCTTTCATGACTTTGCTTTTGACTTCTCCAAAAGGTCTCATACCAATGGAGATGTATTCCTTACTTATATATGAACTTATGATCCACCCTTAATTAGCCAATGTGGGACTCCTCCGATAATCCTCCCCTCGAACAAAGTACACCATAGAGCCTCTCCTAAGGTCTATGGATGGAGGCTTCGAACAACCTCCCCTTAATCTAGGCTCGACTCCTTCTCTGAAGCCTTTGAACAAAGTACACCATTTGTTCGATACTTGAGTCACTTTTGACTACACTTTCAAGGGTCTCAACTTCTTTGTTCGACATTTGAGGATTCTATTGACATGACTAAGTTAAGGGCATGACTTTGATACCATGTTTAGGAATCACGACCCTCTACAATGGTATGATATTGTCCACTTTGAGCATAATCTCTCCTGGCTTTGCTTTTGGCTTCTCCAAAAGGCCTCATACCAAGAGAGATATATTCCTTACTTATATATAAACCCATAATCAATCCCTTAATTAGTGGAGGCGAAACTCCTCTTCCAACAATGTTATGTGTTTAGATGCCGACTTTAAGGTGAGTTCGGCATGAAGTTTGAACACTGGGAAGTACTTTTAGCCGATTAAACTCTTTTCAAGGTCTTTTAGGAATACTTTTATGCTATTTGGTTTTCAGTTTTGAGGCCTTTCTTCTGAAAATGCTCATAGAAAAGTGCAGAGAATAAAGATAATTGGAGTTTCCATTGTTCCCATCAGAATCTTCTTTCTTGATCCGTTATCTTAAATTACCTCCATATCACTTGTTTTATTGCAAGATTGCCTTTAGAAGGACAATATGTTTTTTAGTTATTCTTTTTCATATTTTGCTTTAGGTCCCTCAATTATTGTATATCAGCCCAACCCCACCCCACCGTTAGTAGATATTGTCCTCTTTGGGCTTCCCCTCAAGATTTTTAAAATGCCTCTACTAGGAAGAGGTTTCCACACCCTTATAAAGGGTGTTTCGATCTCCTCCCTAATCGATGTGGGATCTCACGGGGCCCAGCGTCCTCGCTAGCACTCGTTCCCTTCTTCAATCAATGTGGGACCTCCCAATCAACCCCCTTCGGGCCCAGCGTCCTTGCTGGCACACCGCCTTGTGTCCACCTCCTTCAGGGCTCAGCCTTCTCGCTGGCACATCGCCCAGTGTCTAACTCTGATACCATTTGTAACGGCTTAAGCCCACCGCTAGCAGATACTGTTCTCTTTGGACTTTCCCTTTCGAGCTTTCCCTTAAGGTTTTTAAAACGCGTATGCTAGGGAGAAGTTTCCACAGCCTTATAAAGGGTGTTCCATTTTCCTCTCCAACCGATGTGAGATCTTTTTTCCTTCCAACCTTTAGACCCTTGAGATTCCTATTTATATAGTGCAGTTACATGGAGTCTTAACTTGTATTAAGGAGTTCAAATGTTTTACGTATTAAGTTTGTCTTTGGAATCAATCACTGCTTTGCTTTATTAATGTGTTATACAATGTGTTGGCTGTGGATACCAAATTTTCCTCCTTAATAACGCGTAGCTTAGGTCTCTTTGGGACATCCGATAAAATTGGAACGTTACAGAGAGATGATAACACATAAAATGGTGGAAGGTATTCACAGAGGAACATTCACGCCTTCTAGTTCTCAATCGAGCTTTTTTGATACTCATTTTTCATATCTCCCTCCTTGTATTGATACTCACCCTCCCATTAATCTCTTGGAACGTTTCGCTCGCTTCAAGGCCAGCTACCGAGACATCAAAGGCAAGGTTTTAAGTTGGGGTATTGCATTGGGGCACCCTTTGGGATCATTTTTGTGGAGTCTTGATCACTCTTTTCTGATCCTAATCTGACTTATGTGTAGCTAGTTTTTATGTGTTTTATCCCATCAAAATCTTACCATGAACTCCAACGTGCACTATTTCTTCAACCGTAGAACATGGAGTCGATGGTCGAGACGATGATGCAACAGCTTCTATCCAAAGAGATTCTCCTTGAACCAGTGAAGGAAATAGGAGAAAGATATCCCAAATGGTTGGAGGAGCATAAAGCAAGTTTGAGCAAAGAAGACTACGAACGCTATTCTCAGCAACACGAACTGATAAAAGATCTCAACATCGTGTATGAAAACGAACCCGATAACTTCGACAAAATTGTCGAGCTGATGCAGAAAATGCAAGAATGTGGTCAGCCACCAAATGATATTGTGCAAGAGCTGGGACCTGATTTCGATTTAACTAATCTCGCACAATTGTGAGTTTGTTCTTCTCATGTTGTGAATTAGCTGATTATTTGTGCTGTCAATAATTAACATATTATTTGCTTGCAGATCTCCTGAGATGTTGGAGTCTCAGACAAATTGCTGTATAATGTGA ATGGCCGACCATTCCGATGATTTACACGAACTTCTTGACAGTGCTTTGGACGATTTTCAGAAAATCGACCTTAACCATTCCGTTTCGAGAAATGGAGATGGGGCGGAGAGTAGAGGGGCTCTTCCTTCTGGGGTTCAAGGTTTAGGGATGGGTTTGCCTGACTTGAGGAGCATGAAAAAAGGGAAGCAGAAGGTTTCGAAGGAATCGCATGTGTCTGAGGCTCTTGATAAGCTTAGAGAACAGACCAGAGAGGCCGTCAAGGGGCTTGAATCGGTCACTGGCCCTAAAGCTGGTGGTGATGATTTTGGTCAAGATGCTTTGATGGAAGATTGGGTGAAGCAGTTCGCGGAGATGGCTGGCTCTCAGAACATGGAGTCGATGGTCGAGACGATGATGCAACAGCTTCTATCCAAAGAGATTCTCCTTGAACCAGTGAAGGAAATAGGAGAAAGATATCCCAAATGGTTGGAGGAGCATAAAGCAAGTTTGAGCAAAGAAGACTACGAACGCTATTCTCAGCAACACGAACTGATAAAAGATCTCAACATCGTGTATGAAAACGAACCCGATAACTTCGACAAAATTGTCGAGCTGATGCAGAAAATGCAAGAATGTGGTCAGCCACCAAATGATATTGTGCAAGAGCTGGGACCTGATTTCGATTTAACTAATCTCGCACAATTATCTCCTGAGATGTTGGAGTCTCAGACAAATTGCTGTATAATGTGA ATGGCCGACCATTCCGATGATTTACACGAACTTCTTGACAGTGCTTTGGACGATTTTCAGAAAATCGACCTTAACCATTCCGTTTCGAGAAATGGAGATGGGGCGGAGAGTAGAGGGGCTCTTCCTTCTGGGGTTCAAGGTTTAGGGATGGGTTTGCCTGACTTGAGGAGCATGAAAAAAGGGAAGCAGAAGGTTTCGAAGGAATCGCATGTGTCTGAGGCTCTTGATAAGCTTAGAGAACAGACCAGAGAGGCCGTCAAGGGGCTTGAATCGGTCACTGGCCCTAAAGCTGGTGGTGATGATTTTGGTCAAGATGCTTTGATGGAAGATTGGGTGAAGCAGTTCGCGGAGATGGCTGGCTCTCAGAACATGGAGTCGATGGTCGAGACGATGATGCAACAGCTTCTATCCAAAGAGATTCTCCTTGAACCAGTGAAGGAAATAGGAGAAAGATATCCCAAATGGTTGGAGGAGCATAAAGCAAGTTTGAGCAAAGAAGACTACGAACGCTATTCTCAGCAACACGAACTGATAAAAGATCTCAACATCGTGTATGAAAACGAACCCGATAACTTCGACAAAATTGTCGAGCTGATGCAGAAAATGCAAGAATGTGGTCAGCCACCAAATGATATTGTGCAAGAGCTGGGACCTGATTTCGATTTAACTAATCTCGCACAATTATCTCCTGAGATGTTGGAGTCTCAGACAAATTGCTGTATAATGTGA MADHSDDLHELLDSALDDFQKIDLNHSVSRNGDGAESRGALPSGVQGLGMGLPDLRSMKKGKQKVSKESHVSEALDKLREQTREAVKGLESVTGPKAGGDDFGQDALMEDWVKQFAEMAGSQNMESMVETMMQQLLSKEILLEPVKEIGERYPKWLEEHKASLSKEDYERYSQQHELIKDLNIVYENEPDNFDKIVELMQKMQECGQPPNDIVQELGPDFDLTNLAQLSPEMLESQTNCCIM Homology
BLAST of Csor.00g204950 vs. ExPASy Swiss-Prot
Match: Q94EI3 (Peroxisome biogenesis protein 19-2 OS=Arabidopsis thaliana OX=3702 GN=PEX19-2 PE=1 SV=1) HSP 1 Score: 307.8 bits (787), Expect = 1.1e-82 Identity = 156/244 (63.93%), Postives = 200/244 (81.97%), Query Frame = 0
BLAST of Csor.00g204950 vs. ExPASy Swiss-Prot
Match: Q9SRQ3 (Peroxisome biogenesis protein 19-1 OS=Arabidopsis thaliana OX=3702 GN=PEX19-1 PE=1 SV=1) HSP 1 Score: 305.8 bits (782), Expect = 4.2e-82 Identity = 161/248 (64.92%), Postives = 201/248 (81.05%), Query Frame = 0
BLAST of Csor.00g204950 vs. ExPASy Swiss-Prot
Match: Q9QYU1 (Peroxisomal biogenesis factor 19 OS=Rattus norvegicus OX=10116 GN=Pex19 PE=1 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 2.2e-14 Identity = 79/284 (27.82%), Postives = 131/284 (46.13%), Query Frame = 0
BLAST of Csor.00g204950 vs. ExPASy Swiss-Prot
Match: P40855 (Peroxisomal biogenesis factor 19 OS=Homo sapiens OX=9606 GN=PEX19 PE=1 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 3.8e-14 Identity = 79/289 (27.34%), Postives = 131/289 (45.33%), Query Frame = 0
BLAST of Csor.00g204950 vs. ExPASy Swiss-Prot
Match: Q60415 (Peroxisomal biogenesis factor 19 OS=Cricetulus griseus OX=10029 GN=PEX19 PE=1 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.1e-13 Identity = 77/284 (27.11%), Postives = 129/284 (45.42%), Query Frame = 0
BLAST of Csor.00g204950 vs. NCBI nr
Match: KAG6596860.1 (Peroxisome biogenesis protein 19-1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 473 bits (1216), Expect = 7.05e-168 Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0
BLAST of Csor.00g204950 vs. NCBI nr
Match: KAG7028388.1 (Peroxisome biogenesis protein 19-1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 469 bits (1207), Expect = 1.66e-166 Identity = 240/242 (99.17%), Postives = 240/242 (99.17%), Query Frame = 0
BLAST of Csor.00g204950 vs. NCBI nr
Match: XP_022958076.1 (peroxisome biogenesis protein 19-1-like [Cucurbita moschata]) HSP 1 Score: 464 bits (1193), Expect = 2.26e-164 Identity = 237/242 (97.93%), Postives = 239/242 (98.76%), Query Frame = 0
BLAST of Csor.00g204950 vs. NCBI nr
Match: XP_023539043.1 (peroxisome biogenesis protein 19-2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 459 bits (1181), Expect = 1.53e-162 Identity = 235/242 (97.11%), Postives = 238/242 (98.35%), Query Frame = 0
BLAST of Csor.00g204950 vs. NCBI nr
Match: XP_038906370.1 (peroxisome biogenesis protein 19-1-like [Benincasa hispida]) HSP 1 Score: 424 bits (1091), Expect = 7.97e-149 Identity = 217/242 (89.67%), Postives = 229/242 (94.63%), Query Frame = 0
BLAST of Csor.00g204950 vs. ExPASy TrEMBL
Match: A0A6J1H106 (peroxisome biogenesis protein 19-1-like OS=Cucurbita moschata OX=3662 GN=LOC111459389 PE=4 SV=1) HSP 1 Score: 464 bits (1193), Expect = 1.10e-164 Identity = 237/242 (97.93%), Postives = 239/242 (98.76%), Query Frame = 0
BLAST of Csor.00g204950 vs. ExPASy TrEMBL
Match: A0A6J1HN20 (peroxisome biogenesis protein 19-2-like OS=Cucurbita maxima OX=3661 GN=LOC111465099 PE=4 SV=1) HSP 1 Score: 422 bits (1085), Expect = 3.17e-148 Identity = 218/242 (90.08%), Postives = 227/242 (93.80%), Query Frame = 0
BLAST of Csor.00g204950 vs. ExPASy TrEMBL
Match: A0A5D3CJA6 (Peroxisome biogenesis protein 19-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00320 PE=4 SV=1) HSP 1 Score: 422 bits (1084), Expect = 4.50e-148 Identity = 216/242 (89.26%), Postives = 228/242 (94.21%), Query Frame = 0
BLAST of Csor.00g204950 vs. ExPASy TrEMBL
Match: A0A1S3BKN2 (peroxisome biogenesis protein 19-1-like OS=Cucumis melo OX=3656 GN=LOC103490885 PE=4 SV=1) HSP 1 Score: 422 bits (1084), Expect = 4.50e-148 Identity = 216/242 (89.26%), Postives = 228/242 (94.21%), Query Frame = 0
BLAST of Csor.00g204950 vs. ExPASy TrEMBL
Match: A0A6J1E6H4 (peroxisome biogenesis protein 19-2-like OS=Cucurbita moschata OX=3662 GN=LOC111431048 PE=4 SV=1) HSP 1 Score: 419 bits (1078), Expect = 3.69e-147 Identity = 216/242 (89.26%), Postives = 227/242 (93.80%), Query Frame = 0
BLAST of Csor.00g204950 vs. TAIR 10
Match: AT5G17550.1 (peroxin 19-2 ) HSP 1 Score: 307.8 bits (787), Expect = 7.9e-84 Identity = 156/244 (63.93%), Postives = 200/244 (81.97%), Query Frame = 0
BLAST of Csor.00g204950 vs. TAIR 10
Match: AT3G03490.1 (peroxin 19-1 ) HSP 1 Score: 305.8 bits (782), Expect = 3.0e-83 Identity = 161/248 (64.92%), Postives = 201/248 (81.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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