Csor.00g204050 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g204050
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Pescadillo homolog
Location	Csor_Chr06: 5444876 .. 5446143 (-)
RNA-Seq Expression	Csor.00g204050
Synteny	Csor.00g204050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATCTTGTTGAAGATGCTGCTGGTAAGGATGACGTTGAAGATGAAAATACTAGAGTGTGTAAGAATCTTTTCAAGAACATGAAGTTCTTCTTAAGCCGTGAGGTAGGATTATGCTCCATCTTATAATAGTGTTTATGATTTGTGCGTTATTACTTAAAATAGAGATGCTATTTTGAGATGAAATTGTGTAAGAATGTAAGCATTAAATTTCAAAATTCAACATAAGGTAATTTCCAACGTCTTACAAACAGTGACTTTCTGTGTGGAGGGAAGAAATCATATATGTGAGCATGTCTCGTCTTATGTGTAGAGTTTAGGACATCAAACTTCGTACGCCCCAAGTAACAGTTTTGTTGAAACAGTACTGGAAATCTATCAATATATGTGAGTTCATCACATGGTAGAACTCGTCACCTTTTGATTTGTTGAATTATGTCAACTACTATGGGTATTGGATATTGGAAATTGCTGTCTTAATAATCCTTTTTTTTTCTCAATCATATTGATCTTCCTTTTTGTGTTGTGATTGAAATTTGGATCTTATGATTCTCTGTCGATTCTCCCAACTTCCATGTTTAGGTTCCTCGAGAATCACTGCTTTTGGTGGCATGGTTTGTTGGGAAGGAGATGGGGCACCATTTGAGGAATCCGATGAAACCATCACCTATCAGGTTTGCCAATAAATACGGGCACATTCGTATGGATTATATATGATGATTAGAATACATGGCCTCCTGCTGATCCTTTCTGAATGTAGATTGTTGATAGGCCAACACAGACTCACAAGTTCCTCTCTAGAGACTACGTTCAGCCACAATGGGTATTTGATTGTGTGAATACACGGATCATCTTGCCAACTGATGGTTATTTGGTGGGAAGGTACTTCCATGTTTTAAAATGTTATATTAGGTTTCTTTCTTGCATGGATTATCCAAATTTTCTTTAATGAATGTATTTAGATTTCAGATGCTCTCTTTTAATGGAAAGTAGTTCCATAAATCAGAATTTTGAATAAAACAATTTTCTGTTTTTTTTTTTCTTTTTTTTTTCTTCATGTTGTCATTTGATTAAAATATATTGTATGTAAAACTTTCTATAAATTCAGAACTCAATGTTTTTGCTAGTAATACCATCTCAATAGTTTTGATATTAAAAGATTATTCATAAACTCACTCTTAAACAGTGTTGTTTCTTGCTTCTGGTTTGCGTTACGACCTAAACTGATTGGAGATATTGTCAATGAGGCAGAAGATACTGTGTCCTAA

mRNA sequence

ATGCATCTTGTTGAAGATGCTGCTGGTAAGGATGACGTTGAAGATGAAAATACTAGAGTGTGTAAGAATCTTTTCAAGAACATGAAGTTCTTCTTAAGCCGTTCCTCGAGAATCACTGCTTTTGGTGGCATGGTTTGTTGGGAAGGAGATGGGGCACCATTTGAGGAATCCGATGAAACCATCACCTATCAGATTGTTGATAGGCCAACACAGACTCACAAGTTCCTCTCTAGAGACTACGTTCAGCCACAATGGGTATTTGATTGTGTGAATACACGGATCATCTTGCCAACTGATGGTTATTTGGTGGGAAGTGTTGTTTCTTGCTTCTGGTTTGCGTTACGACCTAAACTGATTGGAGATATTGTCAATGAGGCAGAAGATACTGTGTCCTAA

Coding sequence (CDS)

ATGCATCTTGTTGAAGATGCTGCTGGTAAGGATGACGTTGAAGATGAAAATACTAGAGTGTGTAAGAATCTTTTCAAGAACATGAAGTTCTTCTTAAGCCGTTCCTCGAGAATCACTGCTTTTGGTGGCATGGTTTGTTGGGAAGGAGATGGGGCACCATTTGAGGAATCCGATGAAACCATCACCTATCAGATTGTTGATAGGCCAACACAGACTCACAAGTTCCTCTCTAGAGACTACGTTCAGCCACAATGGGTATTTGATTGTGTGAATACACGGATCATCTTGCCAACTGATGGTTATTTGGTGGGAAGTGTTGTTTCTTGCTTCTGGTTTGCGTTACGACCTAAACTGATTGGAGATATTGTCAATGAGGCAGAAGATACTGTGTCCTAA

Protein sequence

MHLVEDAAGKDDVEDENTRVCKNLFKNMKFFLSRSSRITAFGGMVCWEGDGAPFEESDETITYQIVDRPTQTHKFLSRDYVQPQWVFDCVNTRIILPTDGYLVGSVVSCFWFALRPKLIGDIVNEAEDTVS

Homology

[Close]

BLAST of Csor.00g204050 vs. ExPASy Swiss-Prot
Match: Q851S7 (Pescadillo homolog OS=Oryza sativa subsp. japonica OX=39947 GN=PES PE=2 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 2.8e-35
Identity = 68/113 (60.18%), Postives = 88/113 (77.88%), Query Frame = 0


Query: 1   MHLVEDAAGKDDVEDENTRVCKNLFKNMKFFLSRSSR-------ITAFGGMVCWEGDGAP 60
           MHLV+++    D +D + + C++LFKN+KF+LSR          I AFGG V WEG+GAP
Sbjct: 319 MHLVQESTAA-DADDADAKECRSLFKNLKFYLSREVPRESLLFIIPAFGGTVSWEGEGAP 378

Query: 61  FEESDETITYQIVDRPTQTHKFLSRDYVQPQWVFDCVNTRIILPTDGYLVGSV 107
           F+E+DE IT+QIVDRPTQ+H FLSR+YVQPQW++DCVN RIILPT+GY+VG V
Sbjct: 379 FDETDEDITHQIVDRPTQSHVFLSREYVQPQWIYDCVNARIILPTEGYIVGRV 430

[Close]

BLAST of Csor.00g204050 vs. ExPASy Swiss-Prot
Match: Q9LYK7 (Pescadillo homolog OS=Arabidopsis thaliana OX=3702 GN=PES PE=1 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 4.7e-35
Identity = 77/137 (56.20%), Postives = 94/137 (68.61%), Query Frame = 0


Query: 1   MHLVEDAAGKDDVEDENTRVCKNLFKNMKFFLSRSSR-------ITAFGGMVCWEGDGAP 60
           MHLV D   K+  EDE TRVCK+LFK++KFFLSR          ITAFGGMV WEG+GAP
Sbjct: 314 MHLVAD-NNKEVEEDEETRVCKSLFKDLKFFLSREVPRESLQLVITAFGGMVSWEGEGAP 373

Query: 61  FEESDETITYQIVDRPTQTHKFLSRDYVQPQWVFDCVNTRIILPTDGYLVGSVVSCFWFA 120
           F+E DE+IT+ I+D+P+  H +LSR YVQPQW++DCVN RIILPT+ YLVG +       
Sbjct: 374 FKEDDESITHHIIDKPSAGHLYLSRVYVQPQWIYDCVNARIILPTEKYLVGRIPP----- 433

Query: 121 LRPKLIGDIVNEAEDTV 131
             P L   + NEAE  V
Sbjct: 434 --PHLSPFVDNEAEGYV 442

[Close]

BLAST of Csor.00g204050 vs. ExPASy Swiss-Prot
Match: A8JBB2 (Pescadillo homolog OS=Chlamydomonas reinhardtii OX=3055 GN=CHLREDRAFT_206018 PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 9.8e-25
Identity = 54/107 (50.47%), Postives = 68/107 (63.55%), Query Frame = 0


Query: 7   AAGKDDVEDENTRVCKNLFKNMKFFLSRSSR-------ITAFGGMVCWEGDGAPFEESDE 66
           A G      +   VC +LF+   FFL R          I AFGG+  W+GDG+P  E+DE
Sbjct: 348 ACGPGVDPSDEAAVCGSLFRGRVFFLGREVPREPLMLVIRAFGGVAAWDGDGSPHAETDE 407

Query: 67  TITYQIVDRPTQTHKFLSRDYVQPQWVFDCVNTRIILPTDGYLVGSV 107
            +T+QIVDRP Q HKFLSR+YVQPQWVFD  N R+++PTD Y  G+V
Sbjct: 408 AVTHQIVDRPKQGHKFLSREYVQPQWVFDSANFRVLMPTDLYAPGTV 454

[Close]

BLAST of Csor.00g204050 vs. ExPASy Swiss-Prot
Match: B0WD26 (Pescadillo homolog OS=Culex quinquefasciatus OX=7176 GN=CPIJ004969 PE=3 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.2e-22
Identity = 50/96 (52.08%), Postives = 68/96 (70.83%), Query Frame = 0


Query: 22  KNLFKNMKFFLSRSSR-------ITAFGGMVCWEGD---GAPFEESDETITYQIVDRPTQ 81
           KNLFK +KFF++R          +  FGG   W+ +   GA F+ESDETIT+QIVDRP+ 
Sbjct: 322 KNLFKGLKFFINREVPREPLVFILRCFGGRASWDRNLFVGATFDESDETITHQIVDRPSL 381

Query: 82  THKFLSRDYVQPQWVFDCVNTRIILPTDGYLVGSVV 108
             +++SRDYVQPQW+FDCVN R +LP + YL+G+V+
Sbjct: 382 PKQYISRDYVQPQWIFDCVNQRKLLPVNKYLIGAVL 417

[Close]

BLAST of Csor.00g204050 vs. ExPASy Swiss-Prot
Match: Q7QIX1 (Pescadillo homolog OS=Anopheles gambiae OX=7165 GN=AGAP007112 PE=3 SV=4)

HSP 1 Score: 105.1 bits (261), Expect = 6.0e-22
Identity = 53/104 (50.96%), Postives = 68/104 (65.38%), Query Frame = 0


Query: 14  EDENTRVCKNLFKNMKFFLSRSSR-------ITAFGGMVCWEGD---GAPFEESDETITY 73
           E +N    K LFK +KFFL+R          I  FGG V W+     GA F+ESDETIT+
Sbjct: 313 EAQNVNKLKTLFKGLKFFLNREVPREPLVFIIRCFGGKVSWDKTMFVGATFDESDETITH 372

Query: 74  QIVDRPTQTHKFLSRDYVQPQWVFDCVNTRIILPTDGYLVGSVV 108
           QIVDRP+   + +SRDY+QPQWVFD VN R +LPT+ Y +G+V+
Sbjct: 373 QIVDRPSMEKQHISRDYIQPQWVFDSVNQRRLLPTNKYFMGAVL 416

[Close]

BLAST of Csor.00g204050 vs. NCBI nr
Match: KAG6596949.1 (Pescadillo-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 279 bits (713), Expect = 7.57e-95
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MHLVEDAAGKDDVEDENTRVCKNLFKNMKFFLSRSSRITAFGGMVCWEGDGAPFEESDET 60
           MHLVEDAAGKDDVEDENTRVCKNLFKNMKFFLSRSSRITAFGGMVCWEGDGAPFEESDET
Sbjct: 1   MHLVEDAAGKDDVEDENTRVCKNLFKNMKFFLSRSSRITAFGGMVCWEGDGAPFEESDET 60

Query: 61  ITYQIVDRPTQTHKFLSRDYVQPQWVFDCVNTRIILPTDGYLVGSVVSCFWFALRPKLIG 120
           ITYQIVDRPTQTHKFLSRDYVQPQWVFDCVNTRIILPTDGYLVGSVVSCFWFALRPKLIG
Sbjct: 61  ITYQIVDRPTQTHKFLSRDYVQPQWVFDCVNTRIILPTDGYLVGSVVSCFWFALRPKLIG 120

Query: 121 DIVNEAEDTVS 131
           DIVNEAEDTVS
Sbjct: 121 DIVNEAEDTVS 131

[Close]

BLAST of Csor.00g204050 vs. NCBI nr
Match: XP_022152145.1 (pescadillo homolog [Momordica charantia])

HSP 1 Score: 191 bits (484), Expect = 9.83e-55
Identity = 99/137 (72.26%), Postives = 104/137 (75.91%), Query Frame = 0


Query: 1   MHLVEDAAGKDDVEDENTRVCKNLFKNMKFFLSRSSR-------ITAFGGMVCWEGDGAP 60
           MHLVEDAAGKDD EDE+TR CK LFKNMKFFLSR          I AFGGMV WEGDGAP
Sbjct: 321 MHLVEDAAGKDDDEDEDTRECKKLFKNMKFFLSREVPRESLLFVIPAFGGMVSWEGDGAP 380

Query: 61  FEESDETITYQIVDRPTQTHKFLSRDYVQPQWVFDCVNTRIILPTDGYLVGSVVSCFWFA 120
           F+ESDETIT+QIVDRPTQTHKFLSRDYVQPQWVFDCVNTRIILPT+ YLVG V       
Sbjct: 381 FKESDETITHQIVDRPTQTHKFLSRDYVQPQWVFDCVNTRIILPTEAYLVGRVPP----- 440

Query: 121 LRPKLIGDIVNEAEDTV 130
             P L   + NEAE  V
Sbjct: 441 --PHLSPFVDNEAEGYV 450

[Close]

BLAST of Csor.00g204050 vs. NCBI nr
Match: XP_022983630.1 (pescadillo homolog [Cucurbita maxima])

HSP 1 Score: 180 bits (457), Expect = 8.00e-51
Identity = 95/137 (69.34%), Postives = 101/137 (73.72%), Query Frame = 0


Query: 1   MHLVEDAAGKDDVEDENTRVCKNLFKNMKFFLSRSSR-------ITAFGGMVCWEGDGAP 60
           MHL EDAA KD+ EDE+TR CK LFKNMKFFLSR          I AFGGMV WEGDGAP
Sbjct: 320 MHLFEDAACKDEDEDEDTRECKKLFKNMKFFLSREVPRESLLFVIPAFGGMVSWEGDGAP 379

Query: 61  FEESDETITYQIVDRPTQTHKFLSRDYVQPQWVFDCVNTRIILPTDGYLVGSVVSCFWFA 120
           F+ESDETIT+QIVDRPTQ+HKFLSRDYVQPQWVFDCVNTRIILPTD Y VG V       
Sbjct: 380 FKESDETITHQIVDRPTQSHKFLSRDYVQPQWVFDCVNTRIILPTDVYSVGRVPP----- 439

Query: 121 LRPKLIGDIVNEAEDTV 130
             P L   + NEAE  V
Sbjct: 440 --PHLSPFVDNEAEGYV 449

[Close]

BLAST of Csor.00g204050 vs. NCBI nr
Match: XP_038895707.1 (pescadillo homolog [Benincasa hispida])

HSP 1 Score: 179 bits (455), Expect = 1.63e-50
Identity = 86/111 (77.48%), Postives = 94/111 (84.68%), Query Frame = 0


Query: 1   MHLVEDAAGKDDVEDENTRVCKNLFKNMKFFLSRSSR-------ITAFGGMVCWEGDGAP 60
           MHLVEDAAG D+ ED++TR CKNLFKNMKFFLSR          I AFGGMV WEGDGAP
Sbjct: 320 MHLVEDAAGMDEDEDDDTRECKNLFKNMKFFLSREVHRESLLFIIPAFGGMVSWEGDGAP 379

Query: 61  FEESDETITYQIVDRPTQTHKFLSRDYVQPQWVFDCVNTRIILPTDGYLVG 104
           F+ESD+TIT+QIVDR TQTHKFLSRDYVQPQWVFDCVNTR+ILPT+ YLVG
Sbjct: 380 FKESDKTITHQIVDRSTQTHKFLSRDYVQPQWVFDCVNTRMILPTEDYLVG 430

[Close]

BLAST of Csor.00g204050 vs. NCBI nr
Match: XP_023519777.1 (pescadillo homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 179 bits (454), Expect = 2.37e-50
Identity = 95/139 (68.35%), Postives = 103/139 (74.10%), Query Frame = 0


Query: 1   MHLVEDAAGK--DDVEDENTRVCKNLFKNMKFFLSRSSR-------ITAFGGMVCWEGDG 60
           MHLVEDAAGK  D+ EDE+TR CK LFKNMKFFLSR          I AFGGMV WEGDG
Sbjct: 321 MHLVEDAAGKNEDEDEDEDTRECKKLFKNMKFFLSREVPRESLLFVIPAFGGMVSWEGDG 380

Query: 61  APFEESDETITYQIVDRPTQTHKFLSRDYVQPQWVFDCVNTRIILPTDGYLVGSVVSCFW 120
           APF ESD+TIT+QIVDRPTQTHKFLSR+YVQPQWVFDCVNTR+ILPT+ YLVG V     
Sbjct: 381 APFTESDKTITHQIVDRPTQTHKFLSREYVQPQWVFDCVNTRLILPTEDYLVGRVPP--- 440

Query: 121 FALRPKLIGDIVNEAEDTV 130
               P L   + NEAE  V
Sbjct: 441 ----PHLSPFVDNEAEGYV 452

[Close]

BLAST of Csor.00g204050 vs. ExPASy TrEMBL
Match: A0A6J1DD37 (Pescadillo homolog OS=Momordica charantia OX=3673 GN=LOC111019934 PE=3 SV=1)

HSP 1 Score: 191 bits (484), Expect = 4.76e-55
Identity = 99/137 (72.26%), Postives = 104/137 (75.91%), Query Frame = 0


Query: 1   MHLVEDAAGKDDVEDENTRVCKNLFKNMKFFLSRSSR-------ITAFGGMVCWEGDGAP 60
           MHLVEDAAGKDD EDE+TR CK LFKNMKFFLSR          I AFGGMV WEGDGAP
Sbjct: 321 MHLVEDAAGKDDDEDEDTRECKKLFKNMKFFLSREVPRESLLFVIPAFGGMVSWEGDGAP 380

Query: 61  FEESDETITYQIVDRPTQTHKFLSRDYVQPQWVFDCVNTRIILPTDGYLVGSVVSCFWFA 120
           F+ESDETIT+QIVDRPTQTHKFLSRDYVQPQWVFDCVNTRIILPT+ YLVG V       
Sbjct: 381 FKESDETITHQIVDRPTQTHKFLSRDYVQPQWVFDCVNTRIILPTEAYLVGRVPP----- 440

Query: 121 LRPKLIGDIVNEAEDTV 130
             P L   + NEAE  V
Sbjct: 441 --PHLSPFVDNEAEGYV 450

[Close]

BLAST of Csor.00g204050 vs. ExPASy TrEMBL
Match: A0A6J1J6F1 (Pescadillo homolog OS=Cucurbita maxima OX=3661 GN=LOC111482185 PE=3 SV=1)

HSP 1 Score: 180 bits (457), Expect = 3.87e-51
Identity = 95/137 (69.34%), Postives = 101/137 (73.72%), Query Frame = 0


Query: 1   MHLVEDAAGKDDVEDENTRVCKNLFKNMKFFLSRSSR-------ITAFGGMVCWEGDGAP 60
           MHL EDAA KD+ EDE+TR CK LFKNMKFFLSR          I AFGGMV WEGDGAP
Sbjct: 320 MHLFEDAACKDEDEDEDTRECKKLFKNMKFFLSREVPRESLLFVIPAFGGMVSWEGDGAP 379

Query: 61  FEESDETITYQIVDRPTQTHKFLSRDYVQPQWVFDCVNTRIILPTDGYLVGSVVSCFWFA 120
           F+ESDETIT+QIVDRPTQ+HKFLSRDYVQPQWVFDCVNTRIILPTD Y VG V       
Sbjct: 380 FKESDETITHQIVDRPTQSHKFLSRDYVQPQWVFDCVNTRIILPTDVYSVGRVPP----- 439

Query: 121 LRPKLIGDIVNEAEDTV 130
             P L   + NEAE  V
Sbjct: 440 --PHLSPFVDNEAEGYV 449

[Close]

BLAST of Csor.00g204050 vs. ExPASy TrEMBL
Match: A0A6J1HM21 (Pescadillo homolog OS=Cucurbita moschata OX=3662 GN=LOC111464816 PE=3 SV=1)

HSP 1 Score: 179 bits (454), Expect = 1.15e-50
Identity = 95/139 (68.35%), Postives = 103/139 (74.10%), Query Frame = 0


Query: 1   MHLVEDAAGK--DDVEDENTRVCKNLFKNMKFFLSRSSR-------ITAFGGMVCWEGDG 60
           MHLVEDAAGK  D+ EDE+TR CK LFKNMKFFLSR          I AFGGMV WEGDG
Sbjct: 321 MHLVEDAAGKNEDEDEDEDTRECKKLFKNMKFFLSREVPRESLLFVIPAFGGMVSWEGDG 380

Query: 61  APFEESDETITYQIVDRPTQTHKFLSRDYVQPQWVFDCVNTRIILPTDGYLVGSVVSCFW 120
           APF ESD+TIT+QIVDRPTQTHKFLSR+YVQPQWVFDCVNTR+ILPT+ YLVG V     
Sbjct: 381 APFTESDKTITHQIVDRPTQTHKFLSREYVQPQWVFDCVNTRLILPTEDYLVGRVPP--- 440

Query: 121 FALRPKLIGDIVNEAEDTV 130
               P L   + NEAE  V
Sbjct: 441 ----PHLSPFVDNEAEGYV 452

[Close]

BLAST of Csor.00g204050 vs. ExPASy TrEMBL
Match: A0A6J1I2H7 (Pescadillo homolog OS=Cucurbita maxima OX=3661 GN=LOC111469308 PE=3 SV=1)

HSP 1 Score: 176 bits (445), Expect = 2.29e-49
Identity = 93/139 (66.91%), Postives = 102/139 (73.38%), Query Frame = 0


Query: 1   MHLVEDAAGK--DDVEDENTRVCKNLFKNMKFFLSRSSR-------ITAFGGMVCWEGDG 60
           MHLVEDAA K  D+ EDE+TR CK LFKNMKFFLSR          I AFGGMV WEGDG
Sbjct: 321 MHLVEDAAAKNEDEDEDEDTRECKKLFKNMKFFLSREVPRESLLFVIPAFGGMVSWEGDG 380

Query: 61  APFEESDETITYQIVDRPTQTHKFLSRDYVQPQWVFDCVNTRIILPTDGYLVGSVVSCFW 120
           APF ESD+TIT+QIVDRPTQTHKFL+R+YVQPQWVFDCVNTR+ILPT+ YLVG V     
Sbjct: 381 APFTESDKTITHQIVDRPTQTHKFLTREYVQPQWVFDCVNTRLILPTEDYLVGRVPP--- 440

Query: 121 FALRPKLIGDIVNEAEDTV 130
               P L   + NEAE  V
Sbjct: 441 ----PHLSPFVDNEAEGYV 452

[Close]

BLAST of Csor.00g204050 vs. ExPASy TrEMBL
Match: A0A0A0LV49 (Pescadillo homolog OS=Cucumis sativus OX=3659 GN=Csa_1G132100 PE=3 SV=1)

HSP 1 Score: 175 bits (443), Expect = 4.40e-49
Identity = 84/111 (75.68%), Postives = 92/111 (82.88%), Query Frame = 0


Query: 1   MHLVEDAAGKDDVEDENTRVCKNLFKNMKFFLSRSSR-------ITAFGGMVCWEGDGAP 60
           MHLVEDA+G D+ EDE+TR CK LFKNMKFFLSR          I AFGGMV WEGDGAP
Sbjct: 322 MHLVEDASGMDEDEDEDTRECKKLFKNMKFFLSREVHRESLLFIIPAFGGMVSWEGDGAP 381

Query: 61  FEESDETITYQIVDRPTQTHKFLSRDYVQPQWVFDCVNTRIILPTDGYLVG 104
           F+ES++TIT+QIVDR TQTHKFLSRDYVQPQWVFDCVN RIILPT+ YLVG
Sbjct: 382 FKESEKTITHQIVDRSTQTHKFLSRDYVQPQWVFDCVNNRIILPTEDYLVG 432

[Close]

BLAST of Csor.00g204050 vs. TAIR 10
Match: AT5G14520.1 (pescadillo-related )

HSP 1 Score: 148.7 bits (374), Expect = 3.3e-36
Identity = 77/137 (56.20%), Postives = 94/137 (68.61%), Query Frame = 0


Query: 1   MHLVEDAAGKDDVEDENTRVCKNLFKNMKFFLSRSSR-------ITAFGGMVCWEGDGAP 60
           MHLV D   K+  EDE TRVCK+LFK++KFFLSR          ITAFGGMV WEG+GAP
Sbjct: 314 MHLVAD-NNKEVEEDEETRVCKSLFKDLKFFLSREVPRESLQLVITAFGGMVSWEGEGAP 373

Query: 61  FEESDETITYQIVDRPTQTHKFLSRDYVQPQWVFDCVNTRIILPTDGYLVGSVVSCFWFA 120
           F+E DE+IT+ I+D+P+  H +LSR YVQPQW++DCVN RIILPT+ YLVG +       
Sbjct: 374 FKEDDESITHHIIDKPSAGHLYLSRVYVQPQWIYDCVNARIILPTEKYLVGRIPP----- 433

Query: 121 LRPKLIGDIVNEAEDTV 131
             P L   + NEAE  V
Sbjct: 434 --PHLSPFVDNEAEGYV 442

The following BLAST results are available for this feature:

BLAST of Csor.00g204050 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q851S7	2.8e-35	60.18	Pescadillo homolog OS=Oryza sativa subsp. japonica OX=39947 GN=PES PE=2 SV=1	[more]
Q9LYK7	4.7e-35	56.20	Pescadillo homolog OS=Arabidopsis thaliana OX=3702 GN=PES PE=1 SV=1	[more]
A8JBB2	9.8e-25	50.47	Pescadillo homolog OS=Chlamydomonas reinhardtii OX=3055 GN=CHLREDRAFT_206018 PE=...	[more]
B0WD26	1.2e-22	52.08	Pescadillo homolog OS=Culex quinquefasciatus OX=7176 GN=CPIJ004969 PE=3 SV=1	[more]
Q7QIX1	6.0e-22	50.96	Pescadillo homolog OS=Anopheles gambiae OX=7165 GN=AGAP007112 PE=3 SV=4	[more]

BLAST of Csor.00g204050 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6596949.1	7.57e-95	100.00	Pescadillo-like protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022152145.1	9.83e-55	72.26	pescadillo homolog [Momordica charantia]	[more]
XP_022983630.1	8.00e-51	69.34	pescadillo homolog [Cucurbita maxima]	[more]
XP_038895707.1	1.63e-50	77.48	pescadillo homolog [Benincasa hispida]	[more]
XP_023519777.1	2.37e-50	68.35	pescadillo homolog [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g204050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DD37	4.76e-55	72.26	Pescadillo homolog OS=Momordica charantia OX=3673 GN=LOC111019934 PE=3 SV=1	[more]
A0A6J1J6F1	3.87e-51	69.34	Pescadillo homolog OS=Cucurbita maxima OX=3661 GN=LOC111482185 PE=3 SV=1	[more]
A0A6J1HM21	1.15e-50	68.35	Pescadillo homolog OS=Cucurbita moschata OX=3662 GN=LOC111464816 PE=3 SV=1	[more]
A0A6J1I2H7	2.29e-49	66.91	Pescadillo homolog OS=Cucurbita maxima OX=3661 GN=LOC111469308 PE=3 SV=1	[more]
A0A0A0LV49	4.40e-49	75.68	Pescadillo homolog OS=Cucumis sativus OX=3659 GN=Csa_1G132100 PE=3 SV=1	[more]

BLAST of Csor.00g204050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14520.1	3.3e-36	56.20	pescadillo-related	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001357	BRCT domain	PFAM	PF16589	BRCT_2	coord: 22..102 e-value: 8.0E-9 score: 35.8
IPR001357	BRCT domain	PROSITE	PS50172	BRCT	coord: 20..103 score: 10.64106
IPR036420	BRCT domain superfamily	GENE3D	3.40.50.10190	BRCT domain	coord: 28..94 e-value: 3.8E-24 score: 86.7
IPR036420	BRCT domain superfamily	SUPERFAMILY	52113	BRCT domain	coord: 21..104
IPR010613	Pescadillo	PANTHER	PTHR12221	PESCADILLO - RELATED	coord: 1..106
None	No IPR available	PANTHER	PTHR12221:SF6	PESCADILLO HOMOLOG	coord: 1..106
None	No IPR available	CDD	cd17709	BRCT_pescadillo_like	coord: 24..101 e-value: 8.16883E-44 score: 136.55

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g204050.m01	Csor.00g204050.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000466	maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0000463	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:2000232	regulation of rRNA processing
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0005654	nucleoplasm
cellular_component	GO:0070545	PeBoW complex
cellular_component	GO:0030687	preribosome, large subunit precursor
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0043021	ribonucleoprotein complex binding