Csor.00g203980 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g203980
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	transcription factor RADIALIS-like
Location	Csor_Chr20: 4253448 .. 4253759 (-)
RNA-Seq Expression	Csor.00g203980
Synteny	Csor.00g203980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCATGTCCTCCTCTCATCACTCTTCCTCTTGGACTCCCAAGCAAAACAAAGCCTTTGAGAGGGCCTTGGCTGTCTTTGACAAGGACACTCCCGATCGCTGGCTCAATGTCGCCAAGGCCGTTGGCGGGGGCAAGACCCCCGACGAGGTCAAGACCCATTTCGACCTTCTCGTCGAGGATGTCAAACACATTGAATCTGGCCACGTACCATTCCCTAATTATTCCTCTACTGCTTCTGACTCCGGAACATCCAATGCCAACATCAATGATCAAGAACAAAGGTATCACTTCAAAATATACTCTTAA

mRNA sequence

ATGGCTTCCATGTCCTCCTCTCATCACTCTTCCTCTTGGACTCCCAAGCAAAACAAAGCCTTTGAGAGGGCCTTGGCTGTCTTTGACAAGGACACTCCCGATCGCTGGCTCAATGTCGCCAAGGCCGTTGGCGGGGGCAAGACCCCCGACGAGGTCAAGACCCATTTCGACCTTCTCGTCGAGGATGTCAAACACATTGAATCTGGCCACGTACCATTCCCTAATTATTCCTCTACTGCTTCTGACTCCGGAACATCCAATGCCAACATCAATGATCAAGAACAAAGGTATCACTTCAAAATATACTCTTAA

Coding sequence (CDS)

ATGGCTTCCATGTCCTCCTCTCATCACTCTTCCTCTTGGACTCCCAAGCAAAACAAAGCCTTTGAGAGGGCCTTGGCTGTCTTTGACAAGGACACTCCCGATCGCTGGCTCAATGTCGCCAAGGCCGTTGGCGGGGGCAAGACCCCCGACGAGGTCAAGACCCATTTCGACCTTCTCGTCGAGGATGTCAAACACATTGAATCTGGCCACGTACCATTCCCTAATTATTCCTCTACTGCTTCTGACTCCGGAACATCCAATGCCAACATCAATGATCAAGAACAAAGGTATCACTTCAAAATATACTCTTAA

Protein sequence

MASMSSSHHSSSWTPKQNKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVKTHFDLLVEDVKHIESGHVPFPNYSSTASDSGTSNANINDQEQRYHFKIYS

Homology

[Close]

BLAST of Csor.00g203980 vs. ExPASy Swiss-Prot
Match: Q9SIJ5 (Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 5.9e-25
Identity = 60/97 (61.86%), Postives = 76/97 (78.35%), Query Frame = 0


Query: 1  MASMS-SSHHSSSWTPKQNKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVKTHFDLL 60
          MAS S SS+ S SWT KQNKAFERALAV+D+DTPDRW NVA+AV GGKTP+E K  +DLL
Sbjct: 1  MASGSMSSYGSGSWTVKQNKAFERALAVYDQDTPDRWHNVARAV-GGKTPEEAKRQYDLL 60

Query: 61 VEDVKHIESGHVPFPNYSSTASDSGTSNANINDQEQR 97
          V D++ IE+GHVPFP+Y +T  +S  +   + D+E+R
Sbjct: 61 VRDIESIENGHVPFPDYKTTTGNS--NRGRLRDEEKR 94

[Close]

BLAST of Csor.00g203980 vs. ExPASy Swiss-Prot
Match: F4JVB8 (Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 6.5e-24
Identity = 57/97 (58.76%), Postives = 74/97 (76.29%), Query Frame = 0


Query: 1  MASMS-SSHHSSSWTPKQNKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVKTHFDLL 60
          MAS S SS  S SWT KQNKAFE+ALA +D+DTP+RW NVAK V GGKT +EVK H++LL
Sbjct: 1  MASSSMSSQSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVV-GGKTTEEVKRHYELL 60

Query: 61 VEDVKHIESGHVPFPNYSSTASDSGTSNANINDQEQR 97
          V+D+  IE+GHVPFPNY ++    G +N  ++ +E+R
Sbjct: 61 VQDINSIENGHVPFPNYRTS---GGCTNGRLSQEEKR 93

[Close]

BLAST of Csor.00g203980 vs. ExPASy Swiss-Prot
Match: Q58FS3 (Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 4.2e-23
Identity = 50/84 (59.52%), Postives = 65/84 (77.38%), Query Frame = 0


Query: 13 WTPKQNKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVKTHFDLLVEDVKHIESGHVP 72
          W+ K+NKAFERALAV+DKDTPDRW NVA+AV  G+TP+EVK H+++LVED+K+IESG VP
Sbjct: 11 WSAKENKAFERALAVYDKDTPDRWANVARAV-EGRTPEEVKKHYEILVEDIKYIESGKVP 70

Query: 73 FPNYSSTASDSGTSNANINDQEQR 97
          FPNY +T  +  T      + + R
Sbjct: 71 FPNYRTTGGNMKTDEKRFRNLKIR 93

[Close]

BLAST of Csor.00g203980 vs. ExPASy Swiss-Prot
Match: Q1A173 (Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.3e-21
Identity = 59/96 (61.46%), Postives = 70/96 (72.92%), Query Frame = 0


Query: 1  MASMSSSHHSSSWTPKQNKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVKTHFDLLV 60
          MAS S S   S WT  QNK FERALAV+DKDTPDRW NVAKAV GGKT +EVK H+D+LV
Sbjct: 1  MASNSRS-SISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAV-GGKTVEEVKRHYDILV 60

Query: 61 EDVKHIESGHVPFPNYSSTASDSGTSNANINDQEQR 97
          ED+ +IE+G VP PNY +  S+S     +IND + R
Sbjct: 61 EDLINIETGRVPLPNYKTFESNS----RSINDFDTR 90

[Close]

BLAST of Csor.00g203980 vs. ExPASy Swiss-Prot
Match: Q8GW75 (Protein RADIALIS-like 5 OS=Arabidopsis thaliana OX=3702 GN=RL5 PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 6.8e-21
Identity = 57/96 (59.38%), Postives = 69/96 (71.88%), Query Frame = 0


Query: 1  MASMSSSHHSSSWTPKQNKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVKTHFDLLV 60
          MAS SS   SSSWT KQNK FERALAV+DKDTPDRW NVAKAV G K+ +EVK H+D+LV
Sbjct: 1  MAS-SSMSSSSSWTSKQNKMFERALAVYDKDTPDRWQNVAKAV-GSKSAEEVKRHYDILV 60

Query: 61 EDVKHIESGHVPFPNYSSTASDSGTSNANINDQEQR 97
          ED+ +IE   VP P Y +   D G+ +  I+D + R
Sbjct: 61 EDLMNIEQDLVPLPKYKTV--DVGSKSRGIDDFDLR 92

[Close]

BLAST of Csor.00g203980 vs. NCBI nr
Match: KAG6571113.1 (Transcription factor RADIALIS, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 214 bits (544), Expect = 5.75e-70
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MASMSSSHHSSSWTPKQNKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVKTHFDLLV 60
           MASMSSSHHSSSWTPKQNKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVKTHFDLLV
Sbjct: 1   MASMSSSHHSSSWTPKQNKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVKTHFDLLV 60

Query: 61  EDVKHIESGHVPFPNYSSTASDSGTSNANINDQEQRYHFKIYS 103
           EDVKHIESGHVPFPNYSSTASDSGTSNANINDQEQRYHFKIYS
Sbjct: 61  EDVKHIESGHVPFPNYSSTASDSGTSNANINDQEQRYHFKIYS 103

[Close]

BLAST of Csor.00g203980 vs. NCBI nr
Match: KAG6571117.1 (Protein RADIALIS-like 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 197 bits (502), Expect = 1.47e-63
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 1  MASMSSSHHSSSWTPKQNKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVKTHFDLLV 60
          MASMSSSHHSSSWTPKQNKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVKTHFDLLV
Sbjct: 1  MASMSSSHHSSSWTPKQNKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVKTHFDLLV 60

Query: 61 EDVKHIESGHVPFPNYSSTASDSGTSNANINDQEQR 96
          EDVKHIESGHVPFPNYSSTASDSGTSNANINDQEQR
Sbjct: 61 EDVKHIESGHVPFPNYSSTASDSGTSNANINDQEQR 96

[Close]

BLAST of Csor.00g203980 vs. NCBI nr
Match: XP_022944318.1 (protein RADIALIS-like 2 [Cucurbita moschata])

HSP 1 Score: 190 bits (483), Expect = 1.17e-60
Identity = 93/96 (96.88%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 1  MASMSSSHHSSSWTPKQNKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVKTHFDLLV 60
          MASM+SSH SSSWTPKQNKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVKTHFDLLV
Sbjct: 1  MASMASSHRSSSWTPKQNKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVKTHFDLLV 60

Query: 61 EDVKHIESGHVPFPNYSSTASDSGTSNANINDQEQR 96
          EDVKHIESGHVPFPNYSSTAS SGTSNANINDQEQR
Sbjct: 61 EDVKHIESGHVPFPNYSSTASASGTSNANINDQEQR 96

[Close]

BLAST of Csor.00g203980 vs. NCBI nr
Match: XP_022986646.1 (protein RADIALIS-like 2 [Cucurbita maxima])

HSP 1 Score: 190 bits (482), Expect = 1.66e-60
Identity = 92/96 (95.83%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 1  MASMSSSHHSSSWTPKQNKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVKTHFDLLV 60
          MASMSSSHHSSSWTPK+NKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVKTHFDLLV
Sbjct: 1  MASMSSSHHSSSWTPKENKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVKTHFDLLV 60

Query: 61 EDVKHIESGHVPFPNYSSTASDSGTSNANINDQEQR 96
          EDVKHIE GHVPFPNYSSTAS +GTSNANINDQEQR
Sbjct: 61 EDVKHIEFGHVPFPNYSSTASATGTSNANINDQEQR 96

[Close]

BLAST of Csor.00g203980 vs. NCBI nr
Match: XP_023513343.1 (protein RADIALIS-like 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 189 bits (480), Expect = 3.35e-60
Identity = 92/96 (95.83%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 1  MASMSSSHHSSSWTPKQNKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVKTHFDLLV 60
          MASMSSSHHSSSWTPKQNKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVKTHFDLLV
Sbjct: 1  MASMSSSHHSSSWTPKQNKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVKTHFDLLV 60

Query: 61 EDVKHIESGHVPFPNYSSTASDSGTSNANINDQEQR 96
          EDVKHIESGHVPFPNYSSTAS S TSNAN++DQEQR
Sbjct: 61 EDVKHIESGHVPFPNYSSTASASETSNANVSDQEQR 96

[Close]

BLAST of Csor.00g203980 vs. ExPASy TrEMBL
Match: A0A6J1FXX9 (protein RADIALIS-like 2 OS=Cucurbita moschata OX=3662 GN=LOC111448798 PE=4 SV=1)

HSP 1 Score: 190 bits (483), Expect = 5.65e-61
Identity = 93/96 (96.88%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 1  MASMSSSHHSSSWTPKQNKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVKTHFDLLV 60
          MASM+SSH SSSWTPKQNKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVKTHFDLLV
Sbjct: 1  MASMASSHRSSSWTPKQNKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVKTHFDLLV 60

Query: 61 EDVKHIESGHVPFPNYSSTASDSGTSNANINDQEQR 96
          EDVKHIESGHVPFPNYSSTAS SGTSNANINDQEQR
Sbjct: 61 EDVKHIESGHVPFPNYSSTASASGTSNANINDQEQR 96

[Close]

BLAST of Csor.00g203980 vs. ExPASy TrEMBL
Match: A0A6J1JBS7 (protein RADIALIS-like 2 OS=Cucurbita maxima OX=3661 GN=LOC111484324 PE=4 SV=1)

HSP 1 Score: 190 bits (482), Expect = 8.03e-61
Identity = 92/96 (95.83%), Postives = 94/96 (97.92%), Query Frame = 0


Query: 1  MASMSSSHHSSSWTPKQNKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVKTHFDLLV 60
          MASMSSSHHSSSWTPK+NKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVKTHFDLLV
Sbjct: 1  MASMSSSHHSSSWTPKENKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVKTHFDLLV 60

Query: 61 EDVKHIESGHVPFPNYSSTASDSGTSNANINDQEQR 96
          EDVKHIE GHVPFPNYSSTAS +GTSNANINDQEQR
Sbjct: 61 EDVKHIEFGHVPFPNYSSTASATGTSNANINDQEQR 96

[Close]

BLAST of Csor.00g203980 vs. ExPASy TrEMBL
Match: A0A0A0LL58 (MYB transcription factor MYB142 OS=Cucumis sativus OX=3659 GN=Csa_2G247060 PE=4 SV=1)

HSP 1 Score: 159 bits (403), Expect = 8.43e-49
Identity = 81/96 (84.38%), Postives = 85/96 (88.54%), Query Frame = 0


Query: 1  MASMSSSHHSSSWTPKQNKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVKTHFDLLV 60
          MAS+SSS  SSSWTP QNKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVK HFD LV
Sbjct: 1  MASISSS--SSSWTPNQNKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVKRHFDRLV 60

Query: 61 EDVKHIESGHVPFPNYSSTASDSGTSNANINDQEQR 96
          EDVKHIESG VPFP Y+S++S   TSNANI DQEQR
Sbjct: 61 EDVKHIESGRVPFPKYTSSSSSPTTSNANIKDQEQR 94

[Close]

BLAST of Csor.00g203980 vs. ExPASy TrEMBL
Match: A0A1S3CDK8 (protein RADIALIS-like 2 OS=Cucumis melo OX=3656 GN=LOC103499673 PE=4 SV=1)

HSP 1 Score: 155 bits (392), Expect = 5.29e-47
Identity = 81/103 (78.64%), Postives = 86/103 (83.50%), Query Frame = 0


Query: 1   MASMSSSHH---SSSWTPKQNKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVKTHFD 60
           MAS+SSS H   SSSWTP QNKAFERALAVFDKDTPDRWLNVA AVGGGKTPDEVK HFD
Sbjct: 1   MASISSSSHDSASSSWTPNQNKAFERALAVFDKDTPDRWLNVANAVGGGKTPDEVKRHFD 60

Query: 61  LLVEDVKHIESGHVPFPNYSSTASDSG----TSNANINDQEQR 96
            LVEDVKHIESG VPFP Y+S++S S     +SNANI DQEQR
Sbjct: 61  RLVEDVKHIESGRVPFPKYTSSSSSSSAPRTSSNANIKDQEQR 103

[Close]

BLAST of Csor.00g203980 vs. ExPASy TrEMBL
Match: A0A6J1CYR5 (protein RADIALIS-like 2 OS=Momordica charantia OX=3673 GN=LOC111015511 PE=4 SV=1)

HSP 1 Score: 144 bits (364), Expect = 7.21e-43
Identity = 73/96 (76.04%), Postives = 81/96 (84.38%), Query Frame = 0


Query: 1  MASMSSSHHSSSWTPKQNKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVKTHFDLLV 60
          MA+MSS   S SWTP QNKAFERALAVFDKDTPDRW NVA AVGG KT DEVK HFDLLV
Sbjct: 1  MAAMSSRDSSGSWTPNQNKAFERALAVFDKDTPDRWHNVANAVGG-KTADEVKRHFDLLV 60

Query: 61 EDVKHIESGHVPFPNYSSTASDSGTSNANINDQEQR 96
          EDVKHIESG +PFPNY  TA+ +G+SN N+ND+E+R
Sbjct: 61 EDVKHIESGRIPFPNY--TATTTGSSNGNVNDEEKR 93

[Close]

BLAST of Csor.00g203980 vs. TAIR 10
Match: AT2G21650.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 114.8 bits (286), Expect = 4.2e-26
Identity = 60/97 (61.86%), Postives = 76/97 (78.35%), Query Frame = 0


Query: 1  MASMS-SSHHSSSWTPKQNKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVKTHFDLL 60
          MAS S SS+ S SWT KQNKAFERALAV+D+DTPDRW NVA+AV GGKTP+E K  +DLL
Sbjct: 1  MASGSMSSYGSGSWTVKQNKAFERALAVYDQDTPDRWHNVARAV-GGKTPEEAKRQYDLL 60

Query: 61 VEDVKHIESGHVPFPNYSSTASDSGTSNANINDQEQR 97
          V D++ IE+GHVPFP+Y +T  +S  +   + D+E+R
Sbjct: 61 VRDIESIENGHVPFPDYKTTTGNS--NRGRLRDEEKR 94

[Close]

BLAST of Csor.00g203980 vs. TAIR 10
Match: AT4G39250.1 (RAD-like 1 )

HSP 1 Score: 111.3 bits (277), Expect = 4.6e-25
Identity = 57/97 (58.76%), Postives = 74/97 (76.29%), Query Frame = 0


Query: 1  MASMS-SSHHSSSWTPKQNKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVKTHFDLL 60
          MAS S SS  S SWT KQNKAFE+ALA +D+DTP+RW NVAK V GGKT +EVK H++LL
Sbjct: 1  MASSSMSSQSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVV-GGKTTEEVKRHYELL 60

Query: 61 VEDVKHIESGHVPFPNYSSTASDSGTSNANINDQEQR 97
          V+D+  IE+GHVPFPNY ++    G +N  ++ +E+R
Sbjct: 61 VQDINSIENGHVPFPNYRTS---GGCTNGRLSQEEKR 93

[Close]

BLAST of Csor.00g203980 vs. TAIR 10
Match: AT1G75250.1 (RAD-like 6 )

HSP 1 Score: 105.5 bits (262), Expect = 2.5e-23
Identity = 60/97 (61.86%), Postives = 71/97 (73.20%), Query Frame = 0


Query: 1  MASMSSSHHSSSWTPKQNKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVKTHFDLLV 60
          MAS S S   S WT  QNK FERALAV+DKDTPDRW NVAKAV GGKT +EVK H+D+LV
Sbjct: 1  MASNSRS-SISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAV-GGKTVEEVKRHYDILV 60

Query: 61 EDVKHIESGHVPFPNYSSTASDSGTSNANINDQEQRY 98
          ED+ +IE+G VP PNY +  S+S     +IND + RY
Sbjct: 61 EDLINIETGRVPLPNYKTFESNS----RSINDFDTRY 91

[Close]

BLAST of Csor.00g203980 vs. TAIR 10
Match: AT1G75250.2 (RAD-like 6 )

HSP 1 Score: 102.8 bits (255), Expect = 1.7e-22
Identity = 59/96 (61.46%), Postives = 70/96 (72.92%), Query Frame = 0


Query: 1  MASMSSSHHSSSWTPKQNKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVKTHFDLLV 60
          MAS S S   S WT  QNK FERALAV+DKDTPDRW NVAKAV GGKT +EVK H+D+LV
Sbjct: 1  MASNSRS-SISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAV-GGKTVEEVKRHYDILV 60

Query: 61 EDVKHIESGHVPFPNYSSTASDSGTSNANINDQEQR 97
          ED+ +IE+G VP PNY +  S+S     +IND + R
Sbjct: 61 EDLINIETGRVPLPNYKTFESNS----RSINDFDTR 90

[Close]

BLAST of Csor.00g203980 vs. TAIR 10
Match: AT1G19510.1 (RAD-like 5 )

HSP 1 Score: 101.3 bits (251), Expect = 4.8e-22
Identity = 57/96 (59.38%), Postives = 69/96 (71.88%), Query Frame = 0


Query: 1  MASMSSSHHSSSWTPKQNKAFERALAVFDKDTPDRWLNVAKAVGGGKTPDEVKTHFDLLV 60
          MAS SS   SSSWT KQNK FERALAV+DKDTPDRW NVAKAV G K+ +EVK H+D+LV
Sbjct: 1  MAS-SSMSSSSSWTSKQNKMFERALAVYDKDTPDRWQNVAKAV-GSKSAEEVKRHYDILV 60

Query: 61 EDVKHIESGHVPFPNYSSTASDSGTSNANINDQEQR 97
          ED+ +IE   VP P Y +   D G+ +  I+D + R
Sbjct: 61 EDLMNIEQDLVPLPKYKTV--DVGSKSRGIDDFDLR 92

The following BLAST results are available for this feature:

BLAST of Csor.00g203980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SIJ5	5.9e-25	61.86	Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1	[more]
F4JVB8	6.5e-24	58.76	Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1	[more]
Q58FS3	4.2e-23	59.52	Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1	[more]
Q1A173	2.3e-21	61.46	Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1	[more]
Q8GW75	6.8e-21	59.38	Protein RADIALIS-like 5 OS=Arabidopsis thaliana OX=3702 GN=RL5 PE=3 SV=1	[more]

BLAST of Csor.00g203980 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6571113.1	5.75e-70	100.00	Transcription factor RADIALIS, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG6571117.1	1.47e-63	100.00	Protein RADIALIS-like 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022944318.1	1.17e-60	96.88	protein RADIALIS-like 2 [Cucurbita moschata]	[more]
XP_022986646.1	1.66e-60	95.83	protein RADIALIS-like 2 [Cucurbita maxima]	[more]
XP_023513343.1	3.35e-60	95.83	protein RADIALIS-like 2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g203980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FXX9	5.65e-61	96.88	protein RADIALIS-like 2 OS=Cucurbita moschata OX=3662 GN=LOC111448798 PE=4 SV=1	[more]
A0A6J1JBS7	8.03e-61	95.83	protein RADIALIS-like 2 OS=Cucurbita maxima OX=3661 GN=LOC111484324 PE=4 SV=1	[more]
A0A0A0LL58	8.43e-49	84.38	MYB transcription factor MYB142 OS=Cucumis sativus OX=3659 GN=Csa_2G247060 PE=4 ...	[more]
A0A1S3CDK8	5.29e-47	78.64	protein RADIALIS-like 2 OS=Cucumis melo OX=3656 GN=LOC103499673 PE=4 SV=1	[more]
A0A6J1CYR5	7.21e-43	76.04	protein RADIALIS-like 2 OS=Momordica charantia OX=3673 GN=LOC111015511 PE=4 SV=1	[more]

BLAST of Csor.00g203980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21650.1	4.2e-26	61.86	Homeodomain-like superfamily protein	[more]
AT4G39250.1	4.6e-25	58.76	RAD-like 1	[more]
AT1G75250.1	2.5e-23	61.86	RAD-like 6	[more]
AT1G75250.2	1.7e-22	61.46	RAD-like 6	[more]
AT1G19510.1	4.8e-22	59.38	RAD-like 5	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 9..62 e-value: 8.8E-5 score: 31.9
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 5..60 score: 6.005018
None	No IPR available	GENE3D	1.10.10.60		coord: 3..73 e-value: 8.7E-22 score: 78.7
None	No IPR available	PANTHER	PTHR43952:SF53	TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED	coord: 1..90
IPR044636	Transcription factor RADIALIS-like	PANTHER	PTHR43952	MYB FAMILY TRANSCRIPTION FACTOR-RELATED	coord: 1..90
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 11..68

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g203980.m01	Csor.00g203980.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity