Csor.00g203970 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g203970
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr20: 4257870 .. 4259651 (-)
RNA-Seq ExpressionCsor.00g203970
SyntenyCsor.00g203970
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCTATTTCCTTTTGTTTTACCCCTCCGCTTTTTGTCGTTAAGAAATCATGACTCTGACTGTATGGTGCTTACTAACCAACTCACTGTCGCTTCACCCAGCTTACGAGAACGCCAATGGCAGCGAAATGTGACGGACCTTGGCCTTGGTAGGAGTTTTATTCCCCATGGAAACTCTGGAGCATTCCCCTCGTTTCTTCCCTAAATCATTCGGTAAAATCAAAGATCCATTTGCCCACACCATGGGCTCGCAAAATCGAGAGGCGTAAAAACCGGGTAAAATGATTTTTTCTCTATCCTTTTCTTGTGTTTTCTTGGACGAAATCAATGGTGCATTGATCTCGCAACGAGGACTTTGCTTCTTCAGTTTTCTGATTCTGTTCTTTTTTTGTTTTTGTCTGCCTTTTATCGAGTGGTTTTGAACATGAAACTTGTATTATCTGCCTTTTTTAAACTTGCGTGCTTATTTCCGGTCGATTTTTGACAAGGAAGGCCAGCTGTAAGAATCGTTTGCAATGAAAATTTTACTGCTTAGAAAACTGGACTCGAAAGCAATTCGCCGTTGTACAGTTGTCCATTGAAGATCCTTCGCCTTGAGTGTATATTGTTCTTTAGAGGCAAAACGTGATAAGAAAACTTCCCTTGCATTACAAAGAATGGAAACAAGCAATATAAACGCAAATTTATGTTTTGAAATCGGTCAAATGGTAAGGATCTTAACTCCGTCTCATTTCGGAGCTGATCAGTTCATCTTACAATGGTATTTCAAGTTGTTTGTTTGTCTTTAGCTACAGGATGGCACGTCCATTGTTTTATTGATATACAGAGTTGTATTTTTAGATATCATCATCTGAATCTCTCATGATAGTTACTCAATAACGACTTTTCTTACGCAATTGATTTTCTCCAATTTCACCTTGCGCTTCAATTCCTGCCCTCTGTCTTCAAGGGTACTACCAAGCCCAAGCCTGCACAATGATTCTTTATACTTGTTCTTTTTTGCAGATGAAACATTATCTGAAACTCGCATTATGAGCAGCTGCGTTAAACAGTATAAGAAGATGAGAAGAATCGGTGGTTTCTACTCCATTGCTTTGACAGGTATATTATGGAAGTAACGAGATTTTAAATTTTTTTTTTTTTAATATGTACTCTTTCCATTTTTACATGATATGTGCCGTTTATTTTTGTCCATGCACAGTTCTTGTTTGGAATGGAGTTATTGCATTTCCCTCTGCTTGAAGAGGCTGGTTTAGAAACGTGGGCTGTCCGATGTTCTTGGATGGGGCTTTTCTGACTTGGGTGGGTTCATTAGAGTTGATTATTCATTTGGTTATATTTTCTTCTGGCTACTAGTATTTTATAAACTGTAAAAAGGTTTCTCACACATATGTTTCCCTGATTTTACTTATGCCTACTAGATAGTCTTCCACCATGTAACGCCAAACAAAGCGTTCTCATCTTTACCCAGGTAAATCACTTTACCCTTTTTACCTTTCGTTTGTTTTAGAGAAGATTATTGGTTATCAATGTCTCCATTTATCCATGTGTTCTTACGTCTTAAAAGTGCTTATAATTTGAGAATTGAATTCTTTGTGAAGTTTTATTTGTTGTAATGGTTTGTTGAATTTCGGCAACAGTTGTTTCAGGCTGTAATTGAATTTTAAATTGGGTTTTAGTTTTGGAAGACCTACATCAAGAGGCCATGGTGTTAGTTGGACAAGCCTGGAGGCAGCGGTTTGCAGTTGATTTGCTCAGCGTAATCATCCGGAAGCTGTAA

mRNA sequence

ATGGCTCTATTTCCTTTTGTTTTACCCCTCCGCTTTTTGTCGTTAAGAAATCATGACTCTGACTGTATGGTGCTTACTAACCAACTCACTGTCGCTTCACCCAGCTTACGAGAACGCCAATGGCAGCGAAATGTGACGGACCTTGGCCTTGATGAAACATTATCTGAAACTCGCATTATGAGCAGCTGCGTTAAACAGTATAAGAAGATGAGAAGAATCGGTGGTTTCTACTCCATTGCTTTGACAGTTTTGGAAGACCTACATCAAGAGGCCATGGTGTTAGTTGGACAAGCCTGGAGGCAGCGGTTTGCAGTTGATTTGCTCAGCGTAATCATCCGGAAGCTGTAA

Coding sequence (CDS)

ATGGCTCTATTTCCTTTTGTTTTACCCCTCCGCTTTTTGTCGTTAAGAAATCATGACTCTGACTGTATGGTGCTTACTAACCAACTCACTGTCGCTTCACCCAGCTTACGAGAACGCCAATGGCAGCGAAATGTGACGGACCTTGGCCTTGATGAAACATTATCTGAAACTCGCATTATGAGCAGCTGCGTTAAACAGTATAAGAAGATGAGAAGAATCGGTGGTTTCTACTCCATTGCTTTGACAGTTTTGGAAGACCTACATCAAGAGGCCATGGTGTTAGTTGGACAAGCCTGGAGGCAGCGGTTTGCAGTTGATTTGCTCAGCGTAATCATCCGGAAGCTGTAA

Protein sequence

MALFPFVLPLRFLSLRNHDSDCMVLTNQLTVASPSLRERQWQRNVTDLGLDETLSETRIMSSCVKQYKKMRRIGGFYSIALTVLEDLHQEAMVLVGQAWRQRFAVDLLSVIIRKL
Homology
[Close]
BLAST of Csor.00g203970 vs. NCBI nr
Match: KAG6571114.1 (hypothetical protein SDJN03_30029, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 227 bits (579), Expect = 6.37e-75
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0 

Query: 1   MALFPFVLPLRFLSLRNHDSDCMVLTNQLTVASPSLRERQWQRNVTDLGLDETLSETRIM 60
           MALFPFVLPLRFLSLRNHDSDCMVLTNQLTVASPSLRERQWQRNVTDLGLDETLSETRIM
Sbjct: 1   MALFPFVLPLRFLSLRNHDSDCMVLTNQLTVASPSLRERQWQRNVTDLGLDETLSETRIM 60

Query: 61  SSCVKQYKKMRRIGGFYSIALTVLEDLHQEAMVLVGQAWRQRFAVDLLSVIIRKL 115
           SSCVKQYKKMRRIGGFYSIALTVLEDLHQEAMVLVGQAWRQRFAVDLLSVIIRKL
Sbjct: 61  SSCVKQYKKMRRIGGFYSIALTVLEDLHQEAMVLVGQAWRQRFAVDLLSVIIRKL 115

The following BLAST results are available for this feature:
BLAST of Csor.00g203970 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g203970 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6571114.16.37e-75100.00hypothetical protein SDJN03_30029, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g203970 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g203970 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g203970.m01Csor.00g203970.m01mRNA