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Csor.00g203500 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTGGTTTCAAGCAAATGGTAGTAGTAAAGAGTGTCATTTTTCCCTTAACAAATAATTACAAAGCTGCTAGTTTAGCTGATTCTGCACCTGCATCTGTTCCCTTGGCTCTTCGTGTGGAGCCAAAGCCAAAGAGTGGAATTAGGTCTCTCTGTCTCTATGCCACTTAACTCATTGCGCTTGAATTTTTCCAAGGTAGCTGGCTGGTTACCTGTGTACATCACCCATATGTGTGATCAATAGTTTGCTAAATGCAGGCAGCAGGATCTCCTGAAAAGGGTAGTTGAAGTGAAACGGAAAAGGCCCAGAGTTTCAAGTCCAGCAGAGTTAGCAAATCCGAAGCATGAGAGTGAGAATGAAAAGGTGAAAGAGAAGAAGGCCTTATCATCAAAAACAGACAAAAGTGAAGGGGAGAAAGAAGCTGAAAATCCAGTGAAGAGTTTACTAGGTTTGGCATATGCTAGTTCTGATGAAGAGGACGAATGA ATGTGTGGTTTCAAGCAAATGGTAGTAGTAAAGAGTGTCATTTTTCCCTTAACAAATAATTACAAAGCTGCTAGTTTAGCTGATTCTGCACCTGCATCTGTTCCCTTGGCTCTTCGTGTGGAGCCAAAGCCAAAGAGTGGAATTAGGCAGCAGGATCTCCTGAAAAGGGTAGTTGAAGTGAAACGGAAAAGGCCCAGAGTTTCAAGTCCAGCAGAGTTAGCAAATCCGAAGCATGAGAGTGAGAATGAAAAGGTGAAAGAGAAGAAGGCCTTATCATCAAAAACAGACAAAAGTGAAGGGGAGAAAGAAGCTGAAAATCCAGTGAAGAGTTTACTAGGTTTGGCATATGCTAGTTCTGATGAAGAGGACGAATGA ATGTGTGGTTTCAAGCAAATGGTAGTAGTAAAGAGTGTCATTTTTCCCTTAACAAATAATTACAAAGCTGCTAGTTTAGCTGATTCTGCACCTGCATCTGTTCCCTTGGCTCTTCGTGTGGAGCCAAAGCCAAAGAGTGGAATTAGGCAGCAGGATCTCCTGAAAAGGGTAGTTGAAGTGAAACGGAAAAGGCCCAGAGTTTCAAGTCCAGCAGAGTTAGCAAATCCGAAGCATGAGAGTGAGAATGAAAAGGTGAAAGAGAAGAAGGCCTTATCATCAAAAACAGACAAAAGTGAAGGGGAGAAAGAAGCTGAAAATCCAGTGAAGAGTTTACTAGGTTTGGCATATGCTAGTTCTGATGAAGAGGACGAATGA MCGFKQMVVVKSVIFPLTNNYKAASLADSAPASVPLALRVEPKPKSGIRQQDLLKRVVEVKRKRPRVSSPAELANPKHESENEKVKEKKALSSKTDKSEGEKEAENPVKSLLGLAYASSDEEDE Homology
BLAST of Csor.00g203500 vs. NCBI nr
Match: KAG6607433.1 (hypothetical protein SDJN03_00775, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 230 bits (586), Expect = 1.06e-75 Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0
BLAST of Csor.00g203500 vs. NCBI nr
Match: KAG7037092.1 (hypothetical protein SDJN02_00713 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 184 bits (467), Expect = 4.39e-57 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0
BLAST of Csor.00g203500 vs. NCBI nr
Match: XP_022949335.1 (uncharacterized protein LOC111452720 [Cucurbita moschata] >XP_023524672.1 uncharacterized protein LOC111788548 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 183 bits (465), Expect = 2.86e-56 Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 0
BLAST of Csor.00g203500 vs. NCBI nr
Match: XP_022998283.1 (uncharacterized protein LOC111492966 [Cucurbita maxima]) HSP 1 Score: 180 bits (457), Expect = 4.70e-55 Identity = 100/103 (97.09%), Postives = 101/103 (98.06%), Query Frame = 0
BLAST of Csor.00g203500 vs. NCBI nr
Match: XP_038895509.1 (uncharacterized protein LOC120083727 [Benincasa hispida]) HSP 1 Score: 149 bits (377), Expect = 6.11e-43 Identity = 85/103 (82.52%), Postives = 95/103 (92.23%), Query Frame = 0
BLAST of Csor.00g203500 vs. ExPASy TrEMBL
Match: A0A6J1GCG6 (uncharacterized protein LOC111452720 OS=Cucurbita moschata OX=3662 GN=LOC111452720 PE=4 SV=1) HSP 1 Score: 183 bits (465), Expect = 1.38e-56 Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 0
BLAST of Csor.00g203500 vs. ExPASy TrEMBL
Match: A0A6J1KGB7 (uncharacterized protein LOC111492966 OS=Cucurbita maxima OX=3661 GN=LOC111492966 PE=4 SV=1) HSP 1 Score: 180 bits (457), Expect = 2.27e-55 Identity = 100/103 (97.09%), Postives = 101/103 (98.06%), Query Frame = 0
BLAST of Csor.00g203500 vs. ExPASy TrEMBL
Match: A0A0A0LQC3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G032480 PE=4 SV=1) HSP 1 Score: 149 bits (377), Expect = 3.05e-43 Identity = 83/103 (80.58%), Postives = 96/103 (93.20%), Query Frame = 0
BLAST of Csor.00g203500 vs. ExPASy TrEMBL
Match: A0A1S3B0L6 (uncharacterized protein LOC103484557 OS=Cucumis melo OX=3656 GN=LOC103484557 PE=4 SV=1) HSP 1 Score: 147 bits (372), Expect = 1.69e-42 Identity = 83/103 (80.58%), Postives = 94/103 (91.26%), Query Frame = 0
BLAST of Csor.00g203500 vs. ExPASy TrEMBL
Match: A0A5D3BHW1 (Ankyrin repeat domain-containing protein 50 isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00690 PE=4 SV=1) HSP 1 Score: 145 bits (366), Expect = 3.52e-41 Identity = 82/110 (74.55%), Postives = 95/110 (86.36%), Query Frame = 0
BLAST of Csor.00g203500 vs. TAIR 10
Match: AT1G73350.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 46 Blast hits to 46 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 3; Plants - 36; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 86.3 bits (212), Expect = 1.9e-17 Identity = 59/120 (49.17%), Postives = 74/120 (61.67%), Query Frame = 0
BLAST of Csor.00g203500 vs. TAIR 10
Match: AT1G73350.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 50 Blast hits to 50 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 3; Plants - 36; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 86.3 bits (212), Expect = 1.9e-17 Identity = 59/120 (49.17%), Postives = 74/120 (61.67%), Query Frame = 0
BLAST of Csor.00g203500 vs. TAIR 10
Match: AT1G73350.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 86.3 bits (212), Expect = 1.9e-17 Identity = 59/120 (49.17%), Postives = 74/120 (61.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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