Csor.00g203470 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g203470
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	transcription factor PRE5-like
Location	Csor_Chr01: 4437070 .. 4437669 (+)
RNA-Seq Expression	Csor.00g203470
Synteny	Csor.00g203470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCTCCAAATTTCGCGACGACAAGATTAAAAATCTTGTCTTGAAATTGCACACTTTGCTCCCTCAGCTAAACCATAAGTTCGACCACTCCAAGGTATACAAATTTCGTATTTATTAGTATTCTTATTTGATCGAATTTTGAGTCTAGTAGTGAGACATATCTATTAAAAAAAAAAAAATTAAAATTATGTTAACTTATCAACTTATGATATATGCAGGTACCAATAGCAGAGATTTTGAAGGAGACGTGTGATTGTATAAAAAAATTAGAGAGGGAGATAGACGATCTAAGTGAGAGGCTATGGGAGCAGCTCGAGTCAATGGGAGTTGACTTAGAAATGGTTAAAGATTTCTTCTCACCTAAAATTTCTAGCTCGTAATTCAATATTTGAAATTTGGATAAAATTTTAAACACGAAATTGTCTTAATTAGAATTTAAATGCATTATAAAACAACAAAGGATATCAATTATTGAACGTGCTTTATGCATAAAATAGAGTCAACTTATTAGGAGAGTTAAAAAATAGTATTTATATGATATATATAGATTTTTGTTGACTTCTATTTGAATTAGGTCAAAAGAGGATTGAATTGA

mRNA sequence

ATGGCTTCCTCCAAATTTCGCGACGACAAGATTAAAAATCTTGTCTTGAAATTGCACACTTTGCTCCCTCAGCTAAACCATAAGTTCGACCACTCCAAGGTACCAATAGCAGAGATTTTGAAGGAGACGTGTGATTGTATAAAAAAATTAGAGAGGGAGATAGACGATCTAAGTGAGAGGCTATGGGAGCAGCTCGAGTCAATGGGAGTTGACTTAGAAATGGTCAAAAGAGGATTGAATTGA

Coding sequence (CDS)

ATGGCTTCCTCCAAATTTCGCGACGACAAGATTAAAAATCTTGTCTTGAAATTGCACACTTTGCTCCCTCAGCTAAACCATAAGTTCGACCACTCCAAGGTACCAATAGCAGAGATTTTGAAGGAGACGTGTGATTGTATAAAAAAATTAGAGAGGGAGATAGACGATCTAAGTGAGAGGCTATGGGAGCAGCTCGAGTCAATGGGAGTTGACTTAGAAATGGTCAAAAGAGGATTGAATTGA

Protein sequence

MASSKFRDDKIKNLVLKLHTLLPQLNHKFDHSKVPIAEILKETCDCIKKLEREIDDLSERLWEQLESMGVDLEMVKRGLN

Homology

[Close]

BLAST of Csor.00g203470 vs. ExPASy Swiss-Prot
Match: F4JCN9 (Transcription factor PRE4 OS=Arabidopsis thaliana OX=3702 GN=PRE4 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 2.1e-09
Identity = 31/65 (47.69%), Postives = 45/65 (69.23%), Query Frame = 0


Query: 3  SSKFRDDKIKNLVLKLHTLLPQLNHKFDHSKVPIAEILKETCDCIKKLEREIDDLSERLW 62
          +S   D++I +LVL+LH LLP+L +     KV  + +L+ETC  I+ L +E+DDLSERL 
Sbjct: 13 ASMITDEQINDLVLQLHRLLPELANNRRSGKVSASRVLQETCSYIRNLSKEVDDLSERLS 72

Query: 63 EQLES 68
          + LES
Sbjct: 73 QLLES 77

[Close]

BLAST of Csor.00g203470 vs. ExPASy Swiss-Prot
Match: Q9CA64 (Transcription factor PRE3 OS=Arabidopsis thaliana OX=3702 GN=PRE3 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.0e-08
Identity = 29/63 (46.03%), Postives = 43/63 (68.25%), Query Frame = 0


Query: 3  SSKFRDDKIKNLVLKLHTLLPQLNHKFDHSKVPIAEILKETCDCIKKLEREIDDLSERLW 62
          +S+  +D+I +L++KL  LLP+L       KV  A +L++TC+ I+ L RE+DDLSERL 
Sbjct: 14 TSRISEDQINDLIIKLQQLLPELRDSRRSDKVSAARVLQDTCNYIRNLHREVDDLSERLS 73

Query: 63 EQL 66
          E L
Sbjct: 74 ELL 76

[Close]

BLAST of Csor.00g203470 vs. ExPASy Swiss-Prot
Match: Q9LJX1 (Transcription factor PRE5 OS=Arabidopsis thaliana OX=3702 GN=PRE5 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.8e-08
Identity = 28/69 (40.58%), Postives = 49/69 (71.01%), Query Frame = 0


Query: 3  SSKFRDDKIKNLVLKLHTLLPQLNHKFDHSKVPIAEILKETCDCIKKLEREIDDLSERLW 62
          +S+  DD++ +LV KL   LP+++ +    KV  +++L+ETC+ I+KL RE+D+LS+RL 
Sbjct: 12 ASRISDDQMIDLVSKLRQFLPEIHERRRSDKVSASKVLQETCNYIRKLHREVDNLSDRLS 71

Query: 63 EQLESMGVD 72
          + L+S+  D
Sbjct: 72 QLLDSVDED 80

[Close]

BLAST of Csor.00g203470 vs. ExPASy Swiss-Prot
Match: Q8GW32 (Transcription factor PRE6 OS=Arabidopsis thaliana OX=3702 GN=PRE6 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 3.0e-08
Identity = 31/65 (47.69%), Postives = 45/65 (69.23%), Query Frame = 0


Query: 3  SSKFRDDKIKNLVLKLHTLLPQLNHKFDHSKVPIAEILKETCDCIKKLEREIDDLSERLW 62
          SS+  DD+I +LV KL  L+P+L  +    KV  +++L+ETC+ I+ L RE+DDLS+RL 
Sbjct: 14 SSRISDDQISDLVSKLQHLIPELRRR-RSDKVSASKVLQETCNYIRNLHREVDDLSDRLS 73

Query: 63 EQLES 68
          E L S
Sbjct: 74 ELLAS 77

[Close]

BLAST of Csor.00g203470 vs. ExPASy Swiss-Prot
Match: A2Z730 (Transcription factor ILI7 OS=Oryza sativa subsp. indica OX=39946 GN=ILI7 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 5.1e-08
Identity = 34/80 (42.50%), Postives = 50/80 (62.50%), Query Frame = 0


Query: 2  ASSKFRDDKIKNLVLKLHTLLPQLNHKFDHSKVPIAEILKETCDCIKKLEREIDDLSERL 61
          ++++  D++I +LV KL  LLP+   +  + +VP A +L+ETC  I+ L RE+DDLSERL
Sbjct: 11 SAARITDEQIGDLVSKLQALLPEARLR-SNDRVPSARVLQETCSYIRSLHREVDDLSERL 70

Query: 62 WEQLESMGVDLEM--VKRGL 80
           E L +  V      V RGL
Sbjct: 71 AELLAAADVSTAQAAVIRGL 89

[Close]

BLAST of Csor.00g203470 vs. NCBI nr
Match: KAG6607436.1 (Transcription factor PRE4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 163 bits (412), Expect = 1.51e-50
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1  MASSKFRDDKIKNLVLKLHTLLPQLNHKFDHSKVPIAEILKETCDCIKKLEREIDDLSER 60
          MASSKFRDDKIKNLVLKLHTLLPQLNHKFDHSKVPIAEILKETCDCIKKLEREIDDLSER
Sbjct: 1  MASSKFRDDKIKNLVLKLHTLLPQLNHKFDHSKVPIAEILKETCDCIKKLEREIDDLSER 60

Query: 61 LWEQLESMGVDLEMVKRGLN 80
          LWEQLESMGVDLEMVKRGLN
Sbjct: 61 LWEQLESMGVDLEMVKRGLN 80

[Close]

BLAST of Csor.00g203470 vs. NCBI nr
Match: KAG7037094.1 (Transcription factor PRE4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 147 bits (372), Expect = 2.29e-44
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 0


Query: 1  MASSKFRDDKIKNLVLKLHTLLPQLNHKFDHSKVPIAEILKETCDCIKKLEREIDDLSER 60
          MASSKFRDD+IKNLVLKLHTL PQLNHKFDHSKVPIAEILKETCDCIKKLEREIDDLSER
Sbjct: 1  MASSKFRDDEIKNLVLKLHTLPPQLNHKFDHSKVPIAEILKETCDCIKKLEREIDDLSER 60

Query: 61 LWEQLESMGVDLEMVK 76
          LWEQLE +GVDLEMVK
Sbjct: 61 LWEQLEPLGVDLEMVK 76

[Close]

BLAST of Csor.00g203470 vs. NCBI nr
Match: XP_011649678.1 (transcription factor PRE5 [Cucumis sativus] >KGN63980.1 hypothetical protein Csa_014368 [Cucumis sativus])

HSP 1 Score: 111 bits (277), Expect = 6.50e-30
Identity = 56/77 (72.73%), Postives = 65/77 (84.42%), Query Frame = 0


Query: 1  MASSKFRDDKIKNLVLKLHTLLPQLNHK-FDHSKVPIAEILKETCDCIKKLEREIDDLSE 60
          MASSK  DD++KNLV KL TLLPQLNHK  + S+V   EILKETCD IKKL+RE+DDLSE
Sbjct: 1  MASSKLGDDELKNLVSKLQTLLPQLNHKPHNSSEVSAGEILKETCDYIKKLQREVDDLSE 60

Query: 61 RLWEQLESMGVDLEMVK 76
          RLW+QL+SMG+D EMVK
Sbjct: 61 RLWKQLDSMGIDFEMVK 77

[Close]

BLAST of Csor.00g203470 vs. NCBI nr
Match: KAG7020038.1 (Transcription factor PRE5 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 110 bits (275), Expect = 1.21e-29
Identity = 55/80 (68.75%), Postives = 64/80 (80.00%), Query Frame = 0


Query: 1  MASSKFRDDKIKNLVLKLHTLLPQLNHKFDHSKVPIAEILKETCDCIKKLEREIDDLSER 60
          MASS   DD+++NL+ +L TLLPQLNH    S V  AEILKETCD IKKL+RE+DDLSER
Sbjct: 1  MASSTLPDDQLRNLLSRLQTLLPQLNHTLHTSTVSTAEILKETCDYIKKLQREVDDLSER 60

Query: 61 LWEQLESMGVDLEMVKRGLN 80
          LW+QL+SMGVD EMVK  LN
Sbjct: 61 LWKQLDSMGVDFEMVKHLLN 80

[Close]

BLAST of Csor.00g203470 vs. NCBI nr
Match: KAG6584448.1 (Transcription factor PRE5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 110 bits (274), Expect = 1.71e-29
Identity = 54/80 (67.50%), Postives = 64/80 (80.00%), Query Frame = 0


Query: 1  MASSKFRDDKIKNLVLKLHTLLPQLNHKFDHSKVPIAEILKETCDCIKKLEREIDDLSER 60
          MASS   DD+++NL+ +L TLLPQLNH    S V  AEILKETCD IKKL+RE+DDLSER
Sbjct: 1  MASSTLPDDQLRNLLSRLQTLLPQLNHTLHTSTVSTAEILKETCDYIKKLQREVDDLSER 60

Query: 61 LWEQLESMGVDLEMVKRGLN 80
          LW+QL+SMG+D EMVK  LN
Sbjct: 61 LWKQLDSMGIDFEMVKHLLN 80

[Close]

BLAST of Csor.00g203470 vs. ExPASy TrEMBL
Match: A0A0A0LQ05 (DNA binding protein OS=Cucumis sativus OX=3659 GN=Csa_1G032990 PE=4 SV=1)

HSP 1 Score: 111 bits (277), Expect = 3.15e-30
Identity = 56/77 (72.73%), Postives = 65/77 (84.42%), Query Frame = 0


Query: 1  MASSKFRDDKIKNLVLKLHTLLPQLNHK-FDHSKVPIAEILKETCDCIKKLEREIDDLSE 60
          MASSK  DD++KNLV KL TLLPQLNHK  + S+V   EILKETCD IKKL+RE+DDLSE
Sbjct: 1  MASSKLGDDELKNLVSKLQTLLPQLNHKPHNSSEVSAGEILKETCDYIKKLQREVDDLSE 60

Query: 61 RLWEQLESMGVDLEMVK 76
          RLW+QL+SMG+D EMVK
Sbjct: 61 RLWKQLDSMGIDFEMVK 77

[Close]

BLAST of Csor.00g203470 vs. ExPASy TrEMBL
Match: A0A5A7SZP9 (Transcription factor PRE5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold112G00610 PE=4 SV=1)

HSP 1 Score: 108 bits (270), Expect = 3.67e-29
Identity = 55/77 (71.43%), Postives = 65/77 (84.42%), Query Frame = 0


Query: 1  MASSKFRDDKIKNLVLKLHTLLPQLNHKFDHS-KVPIAEILKETCDCIKKLEREIDDLSE 60
          MASSK  D+++KNLV KL TLLPQLNHK D+S +    EILKETCD IKKL++E+DDLSE
Sbjct: 1  MASSKLGDNELKNLVSKLRTLLPQLNHKPDNSSEASTGEILKETCDYIKKLQKEVDDLSE 60

Query: 61 RLWEQLESMGVDLEMVK 76
          RLW+QL+SMGVD EMVK
Sbjct: 61 RLWKQLDSMGVDFEMVK 77

[Close]

BLAST of Csor.00g203470 vs. ExPASy TrEMBL
Match: A0A1S3B0J1 (transcription factor PRE5-like OS=Cucumis melo OX=3656 GN=LOC103484708 PE=4 SV=1)

HSP 1 Score: 108 bits (270), Expect = 3.67e-29
Identity = 55/77 (71.43%), Postives = 65/77 (84.42%), Query Frame = 0


Query: 1  MASSKFRDDKIKNLVLKLHTLLPQLNHKFDHS-KVPIAEILKETCDCIKKLEREIDDLSE 60
          MASSK  D+++KNLV KL TLLPQLNHK D+S +    EILKETCD IKKL++E+DDLSE
Sbjct: 1  MASSKLGDNELKNLVSKLRTLLPQLNHKPDNSSEASTGEILKETCDYIKKLQKEVDDLSE 60

Query: 61 RLWEQLESMGVDLEMVK 76
          RLW+QL+SMGVD EMVK
Sbjct: 61 RLWKQLDSMGVDFEMVK 77

[Close]

BLAST of Csor.00g203470 vs. ExPASy TrEMBL
Match: A0A5D3BKI2 (Transcription factor PRE5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00710 PE=4 SV=1)

HSP 1 Score: 105 bits (261), Expect = 8.41e-28
Identity = 53/75 (70.67%), Postives = 63/75 (84.00%), Query Frame = 0


Query: 1  MASSKFRDDKIKNLVLKLHTLLPQLNHKFDHS-KVPIAEILKETCDCIKKLEREIDDLSE 60
          MASSK  D+++KNLV KL TLLPQLNHK D+S +    EILKETCD IKKL++E+DDLSE
Sbjct: 1  MASSKLGDNELKNLVSKLRTLLPQLNHKPDNSSEASTGEILKETCDYIKKLQKEVDDLSE 60

Query: 61 RLWEQLESMGVDLEM 74
          RLW+QL+SMGVD EM
Sbjct: 61 RLWKQLDSMGVDFEM 75

[Close]

BLAST of Csor.00g203470 vs. ExPASy TrEMBL
Match: A0A5B6V213 (Transcription factor ILI3-like OS=Gossypium australe OX=47621 GN=EPI10_029603 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 3.40e-14
Identity = 35/70 (50.00%), Postives = 51/70 (72.86%), Query Frame = 0


Query: 2  ASSKFRDDKIKNLVLKLHTLLPQLNH-KFDHSKVPIAEILKETCDCIKKLEREIDDLSER 61
          AS+K  DD++  L+L+L TLLPQLNH +   +     +ILKETC  I++L++E+DDLSER
Sbjct: 4  ASNKITDDELNALILRLGTLLPQLNHGRHGRASSSTTKILKETCSYIRRLQKEVDDLSER 63

Query: 62 LWEQLESMGV 70
          L + L+SM +
Sbjct: 64 LSQCLDSMDI 73

[Close]

BLAST of Csor.00g203470 vs. TAIR 10
Match: AT3G47710.1 (BANQUO 3 )

HSP 1 Score: 62.8 bits (151), Expect = 1.5e-10
Identity = 31/65 (47.69%), Postives = 45/65 (69.23%), Query Frame = 0


Query: 3  SSKFRDDKIKNLVLKLHTLLPQLNHKFDHSKVPIAEILKETCDCIKKLEREIDDLSERLW 62
          +S   D++I +LVL+LH LLP+L +     KV  + +L+ETC  I+ L +E+DDLSERL 
Sbjct: 13 ASMITDEQINDLVLQLHRLLPELANNRRSGKVSASRVLQETCSYIRNLSKEVDDLSERLS 72

Query: 63 EQLES 68
          + LES
Sbjct: 73 QLLES 77

[Close]

BLAST of Csor.00g203470 vs. TAIR 10
Match: AT1G74500.1 (activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1 )

HSP 1 Score: 60.5 bits (145), Expect = 7.3e-10
Identity = 29/63 (46.03%), Postives = 43/63 (68.25%), Query Frame = 0


Query: 3  SSKFRDDKIKNLVLKLHTLLPQLNHKFDHSKVPIAEILKETCDCIKKLEREIDDLSERLW 62
          +S+  +D+I +L++KL  LLP+L       KV  A +L++TC+ I+ L RE+DDLSERL 
Sbjct: 14 TSRISEDQINDLIIKLQQLLPELRDSRRSDKVSAARVLQDTCNYIRNLHREVDDLSERLS 73

Query: 63 EQL 66
          E L
Sbjct: 74 ELL 76

[Close]

BLAST of Csor.00g203470 vs. TAIR 10
Match: AT3G28857.1 (basic helix-loop-helix (bHLH) DNA-binding family protein )

HSP 1 Score: 59.7 bits (143), Expect = 1.2e-09
Identity = 28/69 (40.58%), Postives = 49/69 (71.01%), Query Frame = 0


Query: 3  SSKFRDDKIKNLVLKLHTLLPQLNHKFDHSKVPIAEILKETCDCIKKLEREIDDLSERLW 62
          +S+  DD++ +LV KL   LP+++ +    KV  +++L+ETC+ I+KL RE+D+LS+RL 
Sbjct: 12 ASRISDDQMIDLVSKLRQFLPEIHERRRSDKVSASKVLQETCNYIRKLHREVDNLSDRLS 71

Query: 63 EQLESMGVD 72
          + L+S+  D
Sbjct: 72 QLLDSVDED 80

[Close]

BLAST of Csor.00g203470 vs. TAIR 10
Match: AT1G26945.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 58.9 bits (141), Expect = 2.1e-09
Identity = 31/65 (47.69%), Postives = 45/65 (69.23%), Query Frame = 0


Query: 3  SSKFRDDKIKNLVLKLHTLLPQLNHKFDHSKVPIAEILKETCDCIKKLEREIDDLSERLW 62
          SS+  DD+I +LV KL  L+P+L  +    KV  +++L+ETC+ I+ L RE+DDLS+RL 
Sbjct: 14 SSRISDDQISDLVSKLQHLIPELRRR-RSDKVSASKVLQETCNYIRNLHREVDDLSDRLS 73

Query: 63 EQLES 68
          E L S
Sbjct: 74 ELLAS 77

[Close]

BLAST of Csor.00g203470 vs. TAIR 10
Match: AT5G39860.1 (basic helix-loop-helix (bHLH) DNA-binding family protein )

HSP 1 Score: 55.8 bits (133), Expect = 1.8e-08
Identity = 26/70 (37.14%), Postives = 47/70 (67.14%), Query Frame = 0


Query: 2  ASSKFRDDKIKNLVLKLHTLLPQLNHKFDHSKVPIAEILKETCDCIKKLEREIDDLSERL 61
          ++ +  D+++ +LV KL  +LP++  +    K   +++L+ETC+ I+ L RE+D+LSERL
Sbjct: 11 SAPRISDNQMIDLVSKLRQILPEIGQRRRSDKASASKVLQETCNYIRNLNREVDNLSERL 70

Query: 62 WEQLESMGVD 72
           + LES+  D
Sbjct: 71 SQLLESVDED 80

The following BLAST results are available for this feature:

BLAST of Csor.00g203470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JCN9	2.1e-09	47.69	Transcription factor PRE4 OS=Arabidopsis thaliana OX=3702 GN=PRE4 PE=1 SV=1	[more]
Q9CA64	1.0e-08	46.03	Transcription factor PRE3 OS=Arabidopsis thaliana OX=3702 GN=PRE3 PE=1 SV=1	[more]
Q9LJX1	1.8e-08	40.58	Transcription factor PRE5 OS=Arabidopsis thaliana OX=3702 GN=PRE5 PE=1 SV=1	[more]
Q8GW32	3.0e-08	47.69	Transcription factor PRE6 OS=Arabidopsis thaliana OX=3702 GN=PRE6 PE=1 SV=1	[more]
A2Z730	5.1e-08	42.50	Transcription factor ILI7 OS=Oryza sativa subsp. indica OX=39946 GN=ILI7 PE=3 SV...	[more]

BLAST of Csor.00g203470 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6607436.1	1.51e-50	100.00	Transcription factor PRE4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7037094.1	2.29e-44	94.74	Transcription factor PRE4 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_011649678.1	6.50e-30	72.73	transcription factor PRE5 [Cucumis sativus] >KGN63980.1 hypothetical protein Csa...	[more]
KAG7020038.1	1.21e-29	68.75	Transcription factor PRE5 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6584448.1	1.71e-29	67.50	Transcription factor PRE5, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Csor.00g203470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQ05	3.15e-30	72.73	DNA binding protein OS=Cucumis sativus OX=3659 GN=Csa_1G032990 PE=4 SV=1	[more]
A0A5A7SZP9	3.67e-29	71.43	Transcription factor PRE5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A1S3B0J1	3.67e-29	71.43	transcription factor PRE5-like OS=Cucumis melo OX=3656 GN=LOC103484708 PE=4 SV=1	[more]
A0A5D3BKI2	8.41e-28	70.67	Transcription factor PRE5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5B6V213	3.40e-14	50.00	Transcription factor ILI3-like OS=Gossypium australe OX=47621 GN=EPI10_029603 PE...	[more]

BLAST of Csor.00g203470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47710.1	1.5e-10	47.69	BANQUO 3	[more]
AT1G74500.1	7.3e-10	46.03	activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1	[more]
AT3G28857.1	1.2e-09	40.58	basic helix-loop-helix (bHLH) DNA-binding family protein	[more]
AT1G26945.1	2.1e-09	47.69	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G39860.1	1.8e-08	37.14	basic helix-loop-helix (bHLH) DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 40..67
None	No IPR available	PANTHER	PTHR38546:SF3	DNA BINDING PROTEIN	coord: 3..70
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 7..51 e-value: 1.3E-4 score: 21.9
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 1..50 score: 9.699019
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 2..77 e-value: 2.0E-8 score: 36.0
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 5..64
IPR044172	Transcription factor ILI2-like	PANTHER	PTHR38546	DNA BINDING PROTEIN	coord: 3..70

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g203470.m01	Csor.00g203470.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity