Csor.00g202710 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g202710
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	ANK_REP_REGION domain-containing protein
Location	Csor_Chr06: 1954045 .. 1956263 (+)
RNA-Seq Expression	Csor.00g202710
Synteny	Csor.00g202710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTTCCCGGCTTGGATGACGATGGCGGTTACGAGGACGATAATGCTCTCTTTGAAGAGGACGGTGTCATCGAGTTCGATTCCGTTACTCCCACTCACCTCCGCGACCTTGCTAATGACGTCCAGCTCGGCGAATTTAATGGCCTACGCACCTCTCTAGGTTTAACTTCTTCTTTTCCACTTCCTAGAGTTTTCGGTTGAGCTTTCTGGATTGTTCACTATCTTGATTAGGTCGAAATGATTTTTTTCAGTAAATTTGATGCGTTCTCGTCGTGAAAGGAAATGTTTCGATTCAATTTGTAGTGTGCTTCTCGTTATATGTATTTTCGTCATTCTAATACGCAAAGTTGGTTGTCTTGAGGAATGCATGTTGAGCGTAATGAAATAGAGTTGGCTACCCCTGTGCAAACTTTACCATGTTTTATATTGAATTTTGTATGATTTGTGGCTTATTTTGAAGTAAATTAATCATATTATAGTTACTGCTGGAAAGAGGGGCAAATTTGGAGGTTCAAGATGAAGATGGTGCCATTCCTTTGCATGATGCTTGTGCAGGGGAGTGAGTAGACTGTTATAAATAATTTGCTCGTTTCAATTCAGCAATAAGTATTTGAAAATTTATCTGTTGGAAATGTTGTCAAGTCATTTTCTCTTCTCCAATGACTCTAGGTTTTGTAGAGATTGTTCAACTCCTTCTAAACAGTGCTAATGACAGACTGCGTGAAGAGGATGCTAGAATCAGTTGGTTCTGGAGGTGACACTGTAAGTAGCTGGTTATCTTCGATGTCTAAGTTTTATCTTTTTGGATAAGAAATCTAAGCGTTGTCAAATGCTTGTTAATAGATTGTGGGAAGCCAATCAACCAAATACTTGCAAATTGCAACAACTTGGTTATTATTCCTCCTTGTTGATGCACAGAGAGTTATTGTTCTTGAAAATGTACATTGGCTTCTTCAACAGTAGGAATAATTGACTCAAAAAGTGTTCGAAATCCTTTTACACATCACACATGGTAGTGAACAAATTTGATGGAAAAAAAAAAAAAAAAAAAACGAAGTACTAATATTGTTTTAGCATTGTATCTTTAATTCAATGAGGTTGCTATACGTGTACCCGTTTGTTTTACGGTCATGGTGCAGGAGTAGCAATCAATTCCTAGGATGTAACAGCCTAAGTCCACCGCTCGCTAATATTGTCTGTTTTGGACGTAATGTTTCGTTCCTCTCTCAAATCGATGTGAGATCTCACAATTCACCTTCTTGGGGGCAACGTTCTGCTGACACACAGCATTTTAAGAACCTTGAGGGGAAATTCGAAAGGGAAAGTCCAAAGAGGACAATATCAGCTAGTGGTGGGCTTGGACTATTAATATCTGCTAGTGGTGGGCTTGGATTGTTAAAATCTGTTAGTGGGGGCTTGGACTGTTAAAATCTGCTAGTGGTGGGCTTGGACTGTTATAAATGGTATCAGAGCCAAACACTGGGCGGTGTGCCAACACCATGTTTTAAAAACCTTGAGGGGAATCCCGAAAGGGAAAATCCAAAGAAGACAATATCTGCTAGTGGTAGGCTTGGGTTATTACCAATGGTATTAGAGCCAGACATCGGGGGGGGTGTGCCAGCGAGAACGCTAGGCTCCCAAGGGGGGTGGATTGTGAGATCTGACATCGGTTGGAGAGGGGAACAAAACATTTCTTGTAAGGGTGTGGAAACCTCTTCCTAATAGACGCGTTTTAAAATCGTGAGGCTGACGGCGATACGTAACAGGCCAAAATGGATAATATCTGCTAGTGGTGGGTTTGGGCGGTTACATATAATCTCATTCCTCCCGAATTGATCTTTTCAACATTACTTGCACAGCTTCTTCGGCATGCTGCAAGAGGTGAGCATGCCGCAGTTATAAGGCTGCCCCTGGCTTCAGGGGCATCTCCCACCAAGGAAAATACATACGGCAGGGTTTGTATTTTCTGTAGATAAGGAAGATCTGTTTGAAATGAGTTTTCAAATACTTAAAAAAATTGTTTTCAAATACTTAAAAAAAATTGTTTTCAAATACTTAAAAAAATTGTTTTAAGTACTAAAAAAAAGTGTTTTTCCAGTCTGAAACTTTATCCTCTGTCTTTGGTTTAACAGGCCCCAACTGAACTAGCCGATTCAGGGACGGAGGCCAGAACGAGTTTGGAAGCTGCCTCAGCTCACATGGCGGTGGGGTATTAG

mRNA sequence

ATGGCGGTTCCCGGCTTGGATGACGATGGCGGTTACGAGGACGATAATGCTCTCTTTGAAGAGGACGGTGTCATCGAGTTCGATTCCGTTACTCCCACTCACCTCCGCGACCTTGCTAATGACGTCCAGCTCGGCGAATTTAATGGCCTACGCACCTCTCTAGTTACTGCTGGAAAGAGGGGCAAATTTGGAGTGCTAATGACAGACTGCGTGAAGAGGATGCTAGAATCAGTTGGTTCTGGAGGTGACACTGCCCCAACTGAACTAGCCGATTCAGGGACGGAGGCCAGAACGAGTTTGGAAGCTGCCTCAGCTCACATGGCGGTGGGGTATTAG

Coding sequence (CDS)

ATGGCGGTTCCCGGCTTGGATGACGATGGCGGTTACGAGGACGATAATGCTCTCTTTGAAGAGGACGGTGTCATCGAGTTCGATTCCGTTACTCCCACTCACCTCCGCGACCTTGCTAATGACGTCCAGCTCGGCGAATTTAATGGCCTACGCACCTCTCTAGTTACTGCTGGAAAGAGGGGCAAATTTGGAGTGCTAATGACAGACTGCGTGAAGAGGATGCTAGAATCAGTTGGTTCTGGAGGTGACACTGCCCCAACTGAACTAGCCGATTCAGGGACGGAGGCCAGAACGAGTTTGGAAGCTGCCTCAGCTCACATGGCGGTGGGGTATTAG

Protein sequence

MAVPGLDDDGGYEDDNALFEEDGVIEFDSVTPTHLRDLANDVQLGEFNGLRTSLVTAGKRGKFGVLMTDCVKRMLESVGSGGDTAPTELADSGTEARTSLEAASAHMAVGY

Homology

[Close]

BLAST of Csor.00g202710 vs. NCBI nr
Match: KAG6596495.1 (hypothetical protein SDJN03_09675, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 217 bits (553), Expect = 4.39e-71
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MAVPGLDDDGGYEDDNALFEEDGVIEFDSVTPTHLRDLANDVQLGEFNGLRTSLVTAGKR 60
           MAVPGLDDDGGYEDDNALFEEDGVIEFDSVTPTHLRDLANDVQLGEFNGLRTSLVTAGKR
Sbjct: 1   MAVPGLDDDGGYEDDNALFEEDGVIEFDSVTPTHLRDLANDVQLGEFNGLRTSLVTAGKR 60

Query: 61  GKFGVLMTDCVKRMLESVGSGGDTAPTELADSGTEARTSLEAASAHMAVGY 111
           GKFGVLMTDCVKRMLESVGSGGDTAPTELADSGTEARTSLEAASAHMAVGY
Sbjct: 61  GKFGVLMTDCVKRMLESVGSGGDTAPTELADSGTEARTSLEAASAHMAVGY 111

[Close]

BLAST of Csor.00g202710 vs. NCBI nr
Match: KAG7028042.1 (hypothetical protein SDJN02_09222, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 179 bits (455), Expect = 8.90e-56
Identity = 103/137 (75.18%), Postives = 107/137 (78.10%), Query Frame = 0


Query: 1   MAVPGLDDDGGYEDDNALFEEDGVIEFDSVTPTHLRDLANDVQLGEFNGLRTSL-VTAG- 60
           MAVPGLDDDGGYEDDNALFEEDGVIEFD VTPTHLRDLANDVQLGEFNGLRTSL +T+  
Sbjct: 1   MAVPGLDDDGGYEDDNALFEEDGVIEFDFVTPTHLRDLANDVQLGEFNGLRTSLGLTSSF 60

Query: 61  -------KRGK-----------------FGVLMTDCVKRMLESVGSGGDTAPTELADSGT 111
                  +RG                   G+LMTDCVKRMLESVGSGGDTAPTELADSGT
Sbjct: 61  PLPRLLLERGANLEVQDEDGAIPLHDACAGMLMTDCVKRMLESVGSGGDTAPTELADSGT 120

[Close]

BLAST of Csor.00g202710 vs. NCBI nr
Match: XP_038905294.1 (poly [ADP-ribose] polymerase tankyrase [Benincasa hispida])

HSP 1 Score: 87.0 bits (214), Expect = 1.89e-18
Identity = 77/206 (37.38%), Postives = 88/206 (42.72%), Query Frame = 0


Query: 1   MAVPG----LDDDGGYEDDNALFEEDGVIEFDSVTPTHLRDLANDVQLGEFNGLRTSL-- 60
           MAVPG    + D+  YE+DNALFEEDGVIEFDS TP HLR LA   QLG+ +GLRT+L  
Sbjct: 1   MAVPGRRNGMVDEDDYEEDNALFEEDGVIEFDSDTPPHLRALATAAQLGDVDGLRTALDN 60

Query: 61  VTAGK-------------------------------------------------RGKFGV 110
           +T G                                                   G F  
Sbjct: 61  LTVGSINDAVEDGDTALHLTCLYGHLPCVQLLLERGAALEVQDEDGAIPLHDACAGGFVE 120

[Close]

BLAST of Csor.00g202710 vs. NCBI nr
Match: XP_022983109.1 (tankyrase-2 [Cucurbita maxima])

HSP 1 Score: 84.7 bits (208), Expect = 1.47e-17
Identity = 78/206 (37.86%), Postives = 91/206 (44.17%), Query Frame = 0


Query: 1   MAVPG----LDDDGGYEDDNALFEEDGVIEFDSVTPTHLRDLANDVQLGEFNGLRTSL-- 60
           MAVPG    + D+  YE+DNALFEE+GVIEFDS TP HLR LA   QLG+ NGLRT++  
Sbjct: 1   MAVPGRRNGVVDEDDYEEDNALFEENGVIEFDSDTPPHLRALATAAQLGDVNGLRTAIDN 60

Query: 61  VTAG-----------------------------KRG-------KFGVLM----------- 110
           +T G                             +RG       + G +            
Sbjct: 61  LTMGSINDAVEDGDTVLHLTCLYGHLPCVQLLVERGANLEVQDEDGAIPLHDACAGGYVE 120

[Close]

BLAST of Csor.00g202710 vs. NCBI nr
Match: XP_022144606.1 (tankyrase-2 [Momordica charantia])

HSP 1 Score: 84.3 bits (207), Expect = 2.07e-17
Identity = 75/206 (36.41%), Postives = 88/206 (42.72%), Query Frame = 0


Query: 1   MAVPG----LDDDGGYEDDNALFEEDGVIEFDSVTPTHLRDLANDVQLGEFNGLRTSL-- 60
           MAVPG    + D+  YE+DNALFEEDGV+EFDS TP HLR LA   QLG+ NGLR++L  
Sbjct: 1   MAVPGRRNGMVDEDDYEEDNALFEEDGVMEFDSDTPPHLRPLATAAQLGDVNGLRSALDN 60

Query: 61  VTAGK-------------------------------------------------RGKFGV 110
           +T G                                                   G F  
Sbjct: 61  LTMGSIDDAVEDGDTALHLTCLYGHLPCVQLLLERGANLEVEDEDGAIPLHDACAGGFLE 120

[Close]

BLAST of Csor.00g202710 vs. ExPASy TrEMBL
Match: A0A6J1J6D4 (tankyrase-2 OS=Cucurbita maxima OX=3661 GN=LOC111481754 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 7.13e-18
Identity = 78/206 (37.86%), Postives = 91/206 (44.17%), Query Frame = 0


Query: 1   MAVPG----LDDDGGYEDDNALFEEDGVIEFDSVTPTHLRDLANDVQLGEFNGLRTSL-- 60
           MAVPG    + D+  YE+DNALFEE+GVIEFDS TP HLR LA   QLG+ NGLRT++  
Sbjct: 1   MAVPGRRNGVVDEDDYEEDNALFEENGVIEFDSDTPPHLRALATAAQLGDVNGLRTAIDN 60

Query: 61  VTAG-----------------------------KRG-------KFGVLM----------- 110
           +T G                             +RG       + G +            
Sbjct: 61  LTMGSINDAVEDGDTVLHLTCLYGHLPCVQLLVERGANLEVQDEDGAIPLHDACAGGYVE 120

[Close]

BLAST of Csor.00g202710 vs. ExPASy TrEMBL
Match: A0A6J1CTX1 (tankyrase-2 OS=Momordica charantia OX=3673 GN=LOC111014248 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.00e-17
Identity = 75/206 (36.41%), Postives = 88/206 (42.72%), Query Frame = 0


Query: 1   MAVPG----LDDDGGYEDDNALFEEDGVIEFDSVTPTHLRDLANDVQLGEFNGLRTSL-- 60
           MAVPG    + D+  YE+DNALFEEDGV+EFDS TP HLR LA   QLG+ NGLR++L  
Sbjct: 1   MAVPGRRNGMVDEDDYEEDNALFEEDGVMEFDSDTPPHLRPLATAAQLGDVNGLRSALDN 60

Query: 61  VTAGK-------------------------------------------------RGKFGV 110
           +T G                                                   G F  
Sbjct: 61  LTMGSIDDAVEDGDTALHLTCLYGHLPCVQLLLERGANLEVEDEDGAIPLHDACAGGFLE 120

[Close]

BLAST of Csor.00g202710 vs. ExPASy TrEMBL
Match: A0A6J1F1S2 (tankyrase-2 OS=Cucurbita moschata OX=3662 GN=LOC111441383 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.10e-16
Identity = 76/206 (36.89%), Postives = 90/206 (43.69%), Query Frame = 0


Query: 1   MAVPG----LDDDGGYEDDNALFEEDGVIEFDSVTPTHLRDLANDVQLGEFNGLRTSL-- 60
           MAVPG    + D+  YE+DNALFEE+GVIEFDS TP HLR LA   QLG+ NGLR ++  
Sbjct: 1   MAVPGRRNGVVDEDDYEEDNALFEENGVIEFDSDTPPHLRALATAAQLGDVNGLRNAIDN 60

Query: 61  VTAG-----------------------------KRG-------KFGVLM----------- 110
           +T G                             +RG       + G +            
Sbjct: 61  LTMGSINDAVEDGDTVLHLTCLYGHLPCVQLLVERGANLEVQDEDGAIPLHDACAGGYVE 120

[Close]

BLAST of Csor.00g202710 vs. ExPASy TrEMBL
Match: A0A5D3DNG9 (Tankyrase-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002930 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.12e-16
Identity = 76/207 (36.71%), Postives = 89/207 (43.00%), Query Frame = 0


Query: 1   MAVPG----LDDDGGYEDDNALFEEDGVIEFDSVTPTHLRDLANDVQLGEFNGLRTSL-- 60
           MAVPG    + D+  YE+DNALFEEDGVIEFDS TP HLR LA+  QLG+ +GLRT+L  
Sbjct: 1   MAVPGRRNGVVDEDDYEEDNALFEEDGVIEFDSDTPPHLRPLASASQLGDIDGLRTALDN 60

Query: 61  VTAGK-------------------------------------------------RGKFGV 110
           +T G                                                   G F  
Sbjct: 61  LTVGSINDAVEDGDTALHLTCLYGHLPCVRLLLERGAALEVQDEDGAIPLHDACAGGFVE 120

[Close]

BLAST of Csor.00g202710 vs. ExPASy TrEMBL
Match: A0A1S3B6E0 (tankyrase-2 OS=Cucumis melo OX=3656 GN=LOC103486520 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.12e-16
Identity = 76/207 (36.71%), Postives = 89/207 (43.00%), Query Frame = 0


Query: 1   MAVPG----LDDDGGYEDDNALFEEDGVIEFDSVTPTHLRDLANDVQLGEFNGLRTSL-- 60
           MAVPG    + D+  YE+DNALFEEDGVIEFDS TP HLR LA+  QLG+ +GLRT+L  
Sbjct: 1   MAVPGRRNGVVDEDDYEEDNALFEEDGVIEFDSDTPPHLRPLASASQLGDIDGLRTALDN 60

Query: 61  VTAGK-------------------------------------------------RGKFGV 110
           +T G                                                   G F  
Sbjct: 61  LTVGSINDAVEDGDTALHLTCLYGHLPCVRLLLERGAALEVQDEDGAIPLHDACAGGFVE 120

[Close]

BLAST of Csor.00g202710 vs. TAIR 10
Match: AT3G09890.1 (Ankyrin repeat family protein )

HSP 1 Score: 47.8 bits (112), Expect = 6.8e-06
Identity = 27/59 (45.76%), Postives = 39/59 (66.10%), Query Frame = 0


Query: 1  MAVP----GLDDDGGYEDDNALFEEDGV-IEFDSVTPTHLRDLANDVQLGEFNGLRTSL 55
          MAVP    GL+++   + +NA+FEE+GV  + DS  P+HLRDLA   Q G+   LRT++
Sbjct: 1  MAVPRGGNGLNEEEDVDGENAIFEENGVDYDTDSELPSHLRDLAAAAQAGDVAALRTAI 59

[Close]

BLAST of Csor.00g202710 vs. TAIR 10
Match: AT3G09890.2 (Ankyrin repeat family protein )

HSP 1 Score: 47.8 bits (112), Expect = 6.8e-06
Identity = 27/59 (45.76%), Postives = 39/59 (66.10%), Query Frame = 0


Query: 1  MAVP----GLDDDGGYEDDNALFEEDGV-IEFDSVTPTHLRDLANDVQLGEFNGLRTSL 55
          MAVP    GL+++   + +NA+FEE+GV  + DS  P+HLRDLA   Q G+   LRT++
Sbjct: 1  MAVPRGGNGLNEEEDVDGENAIFEENGVDYDTDSELPSHLRDLAAAAQAGDVAALRTAI 59

The following BLAST results are available for this feature:

BLAST of Csor.00g202710 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g202710 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6596495.1	4.39e-71	100.00	hypothetical protein SDJN03_09675, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7028042.1	8.90e-56	75.18	hypothetical protein SDJN02_09222, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_038905294.1	1.89e-18	37.38	poly [ADP-ribose] polymerase tankyrase [Benincasa hispida]	[more]
XP_022983109.1	1.47e-17	37.86	tankyrase-2 [Cucurbita maxima]	[more]
XP_022144606.1	2.07e-17	36.41	tankyrase-2 [Momordica charantia]	[more]

BLAST of Csor.00g202710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J6D4	7.13e-18	37.86	tankyrase-2 OS=Cucurbita maxima OX=3661 GN=LOC111481754 PE=4 SV=1	[more]
A0A6J1CTX1	1.00e-17	36.41	tankyrase-2 OS=Momordica charantia OX=3673 GN=LOC111014248 PE=4 SV=1	[more]
A0A6J1F1S2	1.10e-16	36.89	tankyrase-2 OS=Cucurbita moschata OX=3662 GN=LOC111441383 PE=4 SV=1	[more]
A0A5D3DNG9	1.12e-16	36.71	Tankyrase-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002930 P...	[more]
A0A1S3B6E0	1.12e-16	36.71	tankyrase-2 OS=Cucumis melo OX=3656 GN=LOC103486520 PE=4 SV=1	[more]

BLAST of Csor.00g202710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09890.1	6.8e-06	45.76	Ankyrin repeat family protein	[more]
AT3G09890.2	6.8e-06	45.76	Ankyrin repeat family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g202710.m01	Csor.00g202710.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045732	positive regulation of protein catabolic process
biological_process	GO:0016567	protein ubiquitination