Csor.00g202560 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g202560
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Cell division control protein 48
Location	Csor_Chr06: 1878550 .. 1879802 (-)
RNA-Seq Expression	Csor.00g202560
Synteny	Csor.00g202560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAATCAAGCTGAATCGTCAGACTCGTAAGCCCTTTTTTTCCCTCCCAATTCCAGATCCGAATTATCTTCAAGGATTTGAGTTCTCAATCAAATGGTATTCTTTGTTCCTTCATCCTCCTGAAATTTTGTTTTCCTTTTGTGTTTCTCCAGCAAAGGTACGAAGAGAGACTTCAGTACCGCCATTTTGGAGCGGAAGAAAGCCCCAAATCGACTTGTCGTCGATGAAGCAATCAACGATGATAACTCGGTGGTCGCGCTTCATCCTGATACCATGGAGAAGCTTCAACTCTTCCGTGGGGATACGATCCTCATCAAGGTTTGTCTTCTGGCCATGTAGATTGATCATTCTCATTCGATCAACTGTTTTCTGATTTAGGGGAATTTTTCTTCTATTCACACTTGTGTTACCCTTTGTAGATTTGGAAATTTCTGATCCATTGTTTGAGGTTTTAAGCTTGTAGTGTACTGGGAGATCCGGATATACCATTTTCGTTCCGGTTTGGAATTTTATTTTATTACTTATGCTTGTTTCTTTTGGACTTTTGGGTTTCTGTTTTAAGGGTTTTTAATTTAAAGGGATGGGGATTAAGATTCCCAATCTTATGCTTTTGTTCTTGTAAACATATTATCTAAAGTCCTGACGTTGATACTCAAGCTACATAGTTATGAATATCTAGTTTTACTATTCGAGTTCTTTTGAGGCTGCTAATAGTTATGAACAAAAATGTTAAGTGTAAACATACTTCAATTCAATCAATTGTTTGTGGGGTTCTCTTTTTGATACACTTTCAAATATGATGTTAAAAGTTTACATTTTATCTCGATGATATTGGAATGAGGGATCTGTGATTATAAATTTCCAGTTTTCTTTAATTGTGTTCGTTTCTATATTGTATTTGGTTTCAGGGTAAGAAGAGAAAGGACACAATATGCATTGCTCTAGCTGATGATACATGTGATGAGCCTAAAATAAGGATGAACAAGGTTGTGAGAAGCAATCTTAGGGTTAGGCTTGGTGATGTTGTCTCTGTGCACCAATGTGCTGATGTTAAGTATGGAAAGCGTGTGCATATTCTTCCTGTGGACGATACTATTGAAGGAGTTACTGGAAACCTTTTTGACGCATATTTAAAACGTAAGTTTTATATCTTCATCAACTTCCTTCAAAAACTATACCAATGTGGTTTCATTTATCTTGTTATAACATCTGTTACTGGCATATGCGTGAATGATCTTAAGGCTTACTGA

mRNA sequence

ATGGCAAATCAAGCTGAATCGTCAGACTCCAAAGGTACGAAGAGAGACTTCAGTACCGCCATTTTGGAGCGGAAGAAAGCCCCAAATCGACTTGTCGTCGATGAAGCAATCAACGATGATAACTCGGTGGTCGCGCTTCATCCTGATACCATGGAGAAGCTTCAACTCTTCCGTGGGGATACGATCCTCATCAAGGGTAAGAAGAGAAAGGACACAATATGCATTGCTCTAGCTGATGATACATGTGATGAGCCTAAAATAAGGATGAACAAGGTTGTGAGAAGCAATCTTAGGGTTAGGCTTGGTGATGTTGTCTCTGTGCACCAATGTGCTGATGTTAAGTATGGAAAGCGTGTGCATATTCTTCCTGTGGACGATACTATTGAAGGAGTTACTGGAAACCTTTTTGACGCATATTTAAAACGTAAGTTTTATATCTTCATCAACTTCCTTCAAAAACTATACCAATGTGGTTTCATTTATCTTGTTATAACATCTGTTACTGGCATATGCGTGAATGATCTTAAGGCTTACTGA

Coding sequence (CDS)

ATGGCAAATCAAGCTGAATCGTCAGACTCCAAAGGTACGAAGAGAGACTTCAGTACCGCCATTTTGGAGCGGAAGAAAGCCCCAAATCGACTTGTCGTCGATGAAGCAATCAACGATGATAACTCGGTGGTCGCGCTTCATCCTGATACCATGGAGAAGCTTCAACTCTTCCGTGGGGATACGATCCTCATCAAGGGTAAGAAGAGAAAGGACACAATATGCATTGCTCTAGCTGATGATACATGTGATGAGCCTAAAATAAGGATGAACAAGGTTGTGAGAAGCAATCTTAGGGTTAGGCTTGGTGATGTTGTCTCTGTGCACCAATGTGCTGATGTTAAGTATGGAAAGCGTGTGCATATTCTTCCTGTGGACGATACTATTGAAGGAGTTACTGGAAACCTTTTTGACGCATATTTAAAACGTAAGTTTTATATCTTCATCAACTTCCTTCAAAAACTATACCAATGTGGTTTCATTTATCTTGTTATAACATCTGTTACTGGCATATGCGTGAATGATCTTAAGGCTTACTGA

Protein sequence

MANQAESSDSKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVALHPDTMEKLQLFRGDTILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLKRKFYIFINFLQKLYQCGFIYLVITSVTGICVNDLKAY

Homology

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BLAST of Csor.00g202560 vs. ExPASy Swiss-Prot
Match: Q9SCN8 (Cell division control protein 48 homolog D OS=Arabidopsis thaliana OX=3702 GN=CDC48D PE=1 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 2.7e-70
Identity = 130/144 (90.28%), Postives = 139/144 (96.53%), Query Frame = 0


Query: 1   MANQAESSDSKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVALHPDTMEKLQLFRGD 60
           MANQAESSDSKGTK+DFSTAILE+KKA NRLVVDEAINDDNSVV+LHPDTMEKLQLFRGD
Sbjct: 1   MANQAESSDSKGTKKDFSTAILEKKKAANRLVVDEAINDDNSVVSLHPDTMEKLQLFRGD 60

Query: 61  TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
           TILIKGKKRKDT+CIALAD+TCDEPKIRMNKVVRSNLRVRLGDV+SVHQC DVKYG RVH
Sbjct: 61  TILIKGKKRKDTVCIALADETCDEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGNRVH 120

Query: 121 ILPVDDTIEGVTGNLFDAYLKRKF 145
           ILP+DDTIEGV+GN+FDAYLK  F
Sbjct: 121 ILPLDDTIEGVSGNIFDAYLKPYF 144

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BLAST of Csor.00g202560 vs. ExPASy Swiss-Prot
Match: Q9LZF6 (Cell division control protein 48 homolog E OS=Arabidopsis thaliana OX=3702 GN=CDC48E PE=2 SV=2)

HSP 1 Score: 258.8 bits (660), Expect = 4.4e-68
Identity = 128/144 (88.89%), Postives = 138/144 (95.83%), Query Frame = 0


Query: 1   MANQAESSDSKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVALHPDTMEKLQLFRGD 60
           M+N+ ESSDSK TK+DFSTAILERKK+PNRLVVDEAINDDNSVV+LHP TMEKLQLFRGD
Sbjct: 1   MSNEPESSDSK-TKKDFSTAILERKKSPNRLVVDEAINDDNSVVSLHPTTMEKLQLFRGD 60

Query: 61  TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
           TILIKGKKRKDT+CIALAD+TC+EPKIRMNKVVRSNLRVRLGDV+SVHQC DVKYGKRVH
Sbjct: 61  TILIKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGKRVH 120

Query: 121 ILPVDDTIEGVTGNLFDAYLKRKF 145
           ILPVDDT+EGVTGNLFDAYLK  F
Sbjct: 121 ILPVDDTVEGVTGNLFDAYLKPYF 143

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BLAST of Csor.00g202560 vs. ExPASy Swiss-Prot
Match: P54609 (Cell division control protein 48 homolog A OS=Arabidopsis thaliana OX=3702 GN=CDC48A PE=1 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 4.8e-67
Identity = 127/144 (88.19%), Postives = 137/144 (95.14%), Query Frame = 0


Query: 1   MANQAESSDSKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVALHPDTMEKLQLFRGD 60
           M+  AESSDSK +K+DFSTAILERKK+PNRLVVDEAINDDNSVV+LHP TMEKLQLFRGD
Sbjct: 1   MSTPAESSDSK-SKKDFSTAILERKKSPNRLVVDEAINDDNSVVSLHPATMEKLQLFRGD 60

Query: 61  TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
           TILIKGKKRKDT+CIALAD+TC+EPKIRMNKVVRSNLRVRLGDV+SVHQC DVKYGKRVH
Sbjct: 61  TILIKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGKRVH 120

Query: 121 ILPVDDTIEGVTGNLFDAYLKRKF 145
           ILPVDDT+EGVTGNLFDAYLK  F
Sbjct: 121 ILPVDDTVEGVTGNLFDAYLKPYF 143

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BLAST of Csor.00g202560 vs. ExPASy Swiss-Prot
Match: Q96372 (Cell division cycle protein 48 homolog OS=Capsicum annuum OX=4072 GN=CAFP PE=2 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 1.1e-66
Identity = 126/144 (87.50%), Postives = 135/144 (93.75%), Query Frame = 0


Query: 1   MANQAESSDSKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVALHPDTMEKLQLFRGD 60
           M +QAESSDSK  K+DFSTAILERKKA NRLVVDEA+NDDNSVVALHP TMEKLQLFRGD
Sbjct: 1   MTDQAESSDSKNAKKDFSTAILERKKAANRLVVDEAVNDDNSVVALHPATMEKLQLFRGD 60

Query: 61  TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
           TILIKGKKRKDT+ IALAD+TCDEPKIRMNKVVRSNLRVRLGDVVSVHQC DVKYGKRVH
Sbjct: 61  TILIKGKKRKDTVVIALADETCDEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVH 120

Query: 121 ILPVDDTIEGVTGNLFDAYLKRKF 145
           ILP+DDTIEG+TG+LFDA+LK  F
Sbjct: 121 ILPIDDTIEGLTGDLFDAFLKPYF 144

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BLAST of Csor.00g202560 vs. ExPASy Swiss-Prot
Match: P54774 (Cell division cycle protein 48 homolog OS=Glycine max OX=3847 GN=CDC48 PE=2 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 1.1e-66
Identity = 124/144 (86.11%), Postives = 133/144 (92.36%), Query Frame = 0


Query: 1   MANQAESSDSKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVALHPDTMEKLQLFRGD 60
           M+ Q ESSD K  K+DFSTAILERKK+PNRLVVDEA+NDDNSVV +HP TMEKLQLFRGD
Sbjct: 1   MSQQGESSDPKSGKKDFSTAILERKKSPNRLVVDEAVNDDNSVVTMHPQTMEKLQLFRGD 60

Query: 61  TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
           TILIKGKKRKDTICIALAD+ C+EPKIRMNKVVRSNLRVRLGDVVSVHQC DVKYGKRVH
Sbjct: 61  TILIKGKKRKDTICIALADENCEEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVH 120

Query: 121 ILPVDDTIEGVTGNLFDAYLKRKF 145
           ILP+DDTIEGVTGNLFDA+LK  F
Sbjct: 121 ILPIDDTIEGVTGNLFDAFLKPYF 144

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BLAST of Csor.00g202560 vs. NCBI nr
Match: KAG6596480.1 (Cell division control protein 48-like D, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 355 bits (911), Expect = 1.67e-123
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MANQAESSDSKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVALHPDTMEKLQLFRGD 60
           MANQAESSDSKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVALHPDTMEKLQLFRGD
Sbjct: 1   MANQAESSDSKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVALHPDTMEKLQLFRGD 60

Query: 61  TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
           TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH
Sbjct: 61  TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120

Query: 121 ILPVDDTIEGVTGNLFDAYLKRKFYIFINFLQKLYQCGFIYLVITSVTGICVNDLKAY 178
           ILPVDDTIEGVTGNLFDAYLKRKFYIFINFLQKLYQCGFIYLVITSVTGICVNDLKAY
Sbjct: 121 ILPVDDTIEGVTGNLFDAYLKRKFYIFINFLQKLYQCGFIYLVITSVTGICVNDLKAY 178

[Close]

BLAST of Csor.00g202560 vs. NCBI nr
Match: XP_023539536.1 (cell division control protein 48 homolog D-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 283 bits (724), Expect = 2.86e-94
Identity = 142/144 (98.61%), Postives = 142/144 (98.61%), Query Frame = 0


Query: 1   MANQAESSDSKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVALHPDTMEKLQLFRGD 60
           MANQAESSDSKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVALHPDTMEKLQLFRGD
Sbjct: 1   MANQAESSDSKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVALHPDTMEKLQLFRGD 60

Query: 61  TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
           TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH
Sbjct: 61  TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120

Query: 121 ILPVDDTIEGVTGNLFDAYLKRKF 144
           ILPVDDTIEGVTGNLFDAYLK  F
Sbjct: 121 ILPVDDTIEGVTGNLFDAYLKPYF 144

[Close]

BLAST of Csor.00g202560 vs. NCBI nr
Match: KAG6580612.1 (Cell division control protein 48-like D, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 280 bits (715), Expect = 8.65e-94
Identity = 139/141 (98.58%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 1   MANQAESSDSKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVALHPDTMEKLQLFRGD 60
           MANQ ESSDSKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVALHPDTMEKLQLFRGD
Sbjct: 1   MANQPESSDSKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVALHPDTMEKLQLFRGD 60

Query: 61  TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
           TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDV+SVHQCADVKYGKRVH
Sbjct: 61  TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVISVHQCADVKYGKRVH 120

Query: 121 ILPVDDTIEGVTGNLFDAYLK 141
           ILPVDDTIEGVTGNLFDAYLK
Sbjct: 121 ILPVDDTIEGVTGNLFDAYLK 141

[Close]

BLAST of Csor.00g202560 vs. NCBI nr
Match: KAG6595230.1 (Cell division control protein 48-like D, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 279 bits (714), Expect = 1.00e-93
Identity = 141/161 (87.58%), Postives = 149/161 (92.55%), Query Frame = 0


Query: 1   MANQAESSDSKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVALHPDTMEKLQLFRGD 60
           MANQAESSDSKG+KRDFSTAILERKKA NRL+VDEA+NDDNSVVALHPDTMEKLQLFRGD
Sbjct: 1   MANQAESSDSKGSKRDFSTAILERKKAANRLIVDEAVNDDNSVVALHPDTMEKLQLFRGD 60

Query: 61  TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
           TILIKGKKR+DTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH
Sbjct: 61  TILIKGKKRRDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120

Query: 121 ILPVDDTIEGVTGNLFDAYLKRKF--YIFINFLQKLYQCGF 159
           ILPVDDTIEGVTGNLFDAYLKR+   Y+F++       C F
Sbjct: 121 ILPVDDTIEGVTGNLFDAYLKREILSYLFLSVDLSFASCLF 161

[Close]

BLAST of Csor.00g202560 vs. NCBI nr
Match: XP_022859869.1 (cell division control protein 48 homolog D-like [Olea europaea var. sylvestris])

HSP 1 Score: 278 bits (712), Expect = 3.04e-93
Identity = 137/144 (95.14%), Postives = 141/144 (97.92%), Query Frame = 0


Query: 1   MANQAESSDSKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVALHPDTMEKLQLFRGD 60
           M+NQ ESSDS+G KRDFSTAILERKKA NRLVVDEA+NDDNSVVALHPDTMEKLQLFRGD
Sbjct: 1   MSNQPESSDSRGAKRDFSTAILERKKAANRLVVDEAVNDDNSVVALHPDTMEKLQLFRGD 60

Query: 61  TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
           TILIKGKKRKDT+CIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH
Sbjct: 61  TILIKGKKRKDTVCIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120

Query: 121 ILPVDDTIEGVTGNLFDAYLKRKF 144
           ILPVDDTIEGVTGNLFDAYLKRKF
Sbjct: 121 ILPVDDTIEGVTGNLFDAYLKRKF 144

[Close]

BLAST of Csor.00g202560 vs. ExPASy TrEMBL
Match: A0A067E2N8 (CDC48_N domain-containing protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g0036232mg PE=4 SV=1)

HSP 1 Score: 275 bits (702), Expect = 1.65e-92
Identity = 135/141 (95.74%), Postives = 139/141 (98.58%), Query Frame = 0


Query: 1   MANQAESSDSKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVALHPDTMEKLQLFRGD 60
           M+NQAESSD+KGTKRDFSTAILERKKAPNRLVVDEAINDDNSVV LHPDTMEKLQ FRGD
Sbjct: 1   MSNQAESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGD 60

Query: 61  TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
           TILIKGKKRKDT+CIALADDTC+EPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH
Sbjct: 61  TILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120

Query: 121 ILPVDDTIEGVTGNLFDAYLK 141
           ILPVDDTIEGVTGNLFDAYLK
Sbjct: 121 ILPVDDTIEGVTGNLFDAYLK 141

[Close]

BLAST of Csor.00g202560 vs. ExPASy TrEMBL
Match: A0A2R6R7W6 (Cell division control protein 48 D like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc08477 PE=4 SV=1)

HSP 1 Score: 279 bits (713), Expect = 6.71e-92
Identity = 138/144 (95.83%), Postives = 142/144 (98.61%), Query Frame = 0


Query: 1   MANQAESSDSKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVALHPDTMEKLQLFRGD 60
           M+NQAESSDSKGTKRDFSTAILERKK+PNRLVVDEAINDDNSVVALHPDTMEKLQLFRGD
Sbjct: 1   MSNQAESSDSKGTKRDFSTAILERKKSPNRLVVDEAINDDNSVVALHPDTMEKLQLFRGD 60

Query: 61  TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
           TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH
Sbjct: 61  TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120

Query: 121 ILPVDDTIEGVTGNLFDAYLKRKF 144
           ILP+DD+IEGVTGNLFDAYLK  F
Sbjct: 121 ILPIDDSIEGVTGNLFDAYLKPYF 144

[Close]

BLAST of Csor.00g202560 vs. ExPASy TrEMBL
Match: A0A2P5CH24 (AAA ATPase, CDC48 family OS=Parasponia andersonii OX=3476 GN=PanWU01x14_153160 PE=4 SV=1)

HSP 1 Score: 277 bits (709), Expect = 3.41e-91
Identity = 138/144 (95.83%), Postives = 141/144 (97.92%), Query Frame = 0


Query: 1   MANQAESSDSKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVALHPDTMEKLQLFRGD 60
           M+NQAESSDSKGTKRDFSTAILERKKA NRLVVDEAINDDNSVV+LHPDTMEKLQLFRGD
Sbjct: 1   MSNQAESSDSKGTKRDFSTAILERKKAANRLVVDEAINDDNSVVSLHPDTMEKLQLFRGD 60

Query: 61  TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
           TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH
Sbjct: 61  TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120

Query: 121 ILPVDDTIEGVTGNLFDAYLKRKF 144
           ILP+DDTIEGVTGNLFDAYLK  F
Sbjct: 121 ILPIDDTIEGVTGNLFDAYLKPYF 144

[Close]

BLAST of Csor.00g202560 vs. ExPASy TrEMBL
Match: A0A072TJQ8 (Cell division control-like protein OS=Medicago truncatula OX=3880 GN=MTR_0041s0130 PE=4 SV=1)

HSP 1 Score: 270 bits (691), Expect = 8.68e-91
Identity = 135/143 (94.41%), Postives = 141/143 (98.60%), Query Frame = 0


Query: 1   MANQAESSDSKGT-KRDFSTAILERKKAPNRLVVDEAINDDNSVVALHPDTMEKLQLFRG 60
           MANQ ESSD+KGT KRDFSTAILERKKAPNRLVVDEA+NDDNSVVALHP+TMEKLQLFRG
Sbjct: 1   MANQPESSDAKGTTKRDFSTAILERKKAPNRLVVDEAVNDDNSVVALHPETMEKLQLFRG 60

Query: 61  DTILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRV 120
           DTILIKGKKRKDTICIALAD+TC+EPKIRMNKVVR+NLRVRLGDVVSVHQCADVKYGKRV
Sbjct: 61  DTILIKGKKRKDTICIALADETCEEPKIRMNKVVRNNLRVRLGDVVSVHQCADVKYGKRV 120

Query: 121 HILPVDDTIEGVTGNLFDAYLKR 142
           HILPVDDTIEGVTGNLFDAYLKR
Sbjct: 121 HILPVDDTIEGVTGNLFDAYLKR 143

[Close]

BLAST of Csor.00g202560 vs. ExPASy TrEMBL
Match: A0A5B7AQH8 (Putative ATPase, AAA-type, CDC48 protein isoform 2 OS=Davidia involucrata OX=16924 GN=Din_028411 PE=3 SV=1)

HSP 1 Score: 279 bits (714), Expect = 2.51e-90
Identity = 138/144 (95.83%), Postives = 142/144 (98.61%), Query Frame = 0


Query: 1   MANQAESSDSKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVALHPDTMEKLQLFRGD 60
           M+NQAESSDSKGTKRDFSTAILERKK+PNRLVVDEA+NDDNSVV+LHPDTMEKLQLFRGD
Sbjct: 1   MSNQAESSDSKGTKRDFSTAILERKKSPNRLVVDEAVNDDNSVVSLHPDTMEKLQLFRGD 60

Query: 61  TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
           TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH
Sbjct: 61  TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120

Query: 121 ILPVDDTIEGVTGNLFDAYLKRKF 144
           ILPVDDTIEGVTGNLFDAYLK  F
Sbjct: 121 ILPVDDTIEGVTGNLFDAYLKPYF 144

[Close]

BLAST of Csor.00g202560 vs. TAIR 10
Match: AT3G53230.1 (ATPase, AAA-type, CDC48 protein )

HSP 1 Score: 266.2 bits (679), Expect = 1.9e-71
Identity = 130/144 (90.28%), Postives = 139/144 (96.53%), Query Frame = 0


Query: 1   MANQAESSDSKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVALHPDTMEKLQLFRGD 60
           MANQAESSDSKGTK+DFSTAILE+KKA NRLVVDEAINDDNSVV+LHPDTMEKLQLFRGD
Sbjct: 1   MANQAESSDSKGTKKDFSTAILEKKKAANRLVVDEAINDDNSVVSLHPDTMEKLQLFRGD 60

Query: 61  TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
           TILIKGKKRKDT+CIALAD+TCDEPKIRMNKVVRSNLRVRLGDV+SVHQC DVKYG RVH
Sbjct: 61  TILIKGKKRKDTVCIALADETCDEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGNRVH 120

Query: 121 ILPVDDTIEGVTGNLFDAYLKRKF 145
           ILP+DDTIEGV+GN+FDAYLK  F
Sbjct: 121 ILPLDDTIEGVSGNIFDAYLKPYF 144

[Close]

BLAST of Csor.00g202560 vs. TAIR 10
Match: AT5G03340.1 (ATPase, AAA-type, CDC48 protein )

HSP 1 Score: 258.8 bits (660), Expect = 3.1e-69
Identity = 128/144 (88.89%), Postives = 138/144 (95.83%), Query Frame = 0


Query: 1   MANQAESSDSKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVALHPDTMEKLQLFRGD 60
           M+N+ ESSDSK TK+DFSTAILERKK+PNRLVVDEAINDDNSVV+LHP TMEKLQLFRGD
Sbjct: 1   MSNEPESSDSK-TKKDFSTAILERKKSPNRLVVDEAINDDNSVVSLHPTTMEKLQLFRGD 60

Query: 61  TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
           TILIKGKKRKDT+CIALAD+TC+EPKIRMNKVVRSNLRVRLGDV+SVHQC DVKYGKRVH
Sbjct: 61  TILIKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGKRVH 120

Query: 121 ILPVDDTIEGVTGNLFDAYLKRKF 145
           ILPVDDT+EGVTGNLFDAYLK  F
Sbjct: 121 ILPVDDTVEGVTGNLFDAYLKPYF 143

[Close]

BLAST of Csor.00g202560 vs. TAIR 10
Match: AT3G09840.1 (cell division cycle 48 )

HSP 1 Score: 255.4 bits (651), Expect = 3.4e-68
Identity = 127/144 (88.19%), Postives = 137/144 (95.14%), Query Frame = 0


Query: 1   MANQAESSDSKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVALHPDTMEKLQLFRGD 60
           M+  AESSDSK +K+DFSTAILERKK+PNRLVVDEAINDDNSVV+LHP TMEKLQLFRGD
Sbjct: 1   MSTPAESSDSK-SKKDFSTAILERKKSPNRLVVDEAINDDNSVVSLHPATMEKLQLFRGD 60

Query: 61  TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
           TILIKGKKRKDT+CIALAD+TC+EPKIRMNKVVRSNLRVRLGDV+SVHQC DVKYGKRVH
Sbjct: 61  TILIKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGKRVH 120

Query: 121 ILPVDDTIEGVTGNLFDAYLKRKF 145
           ILPVDDT+EGVTGNLFDAYLK  F
Sbjct: 121 ILPVDDTVEGVTGNLFDAYLKPYF 143

The following BLAST results are available for this feature:

BLAST of Csor.00g202560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SCN8	2.7e-70	90.28	Cell division control protein 48 homolog D OS=Arabidopsis thaliana OX=3702 GN=CD...	[more]
Q9LZF6	4.4e-68	88.89	Cell division control protein 48 homolog E OS=Arabidopsis thaliana OX=3702 GN=CD...	[more]
P54609	4.8e-67	88.19	Cell division control protein 48 homolog A OS=Arabidopsis thaliana OX=3702 GN=CD...	[more]
Q96372	1.1e-66	87.50	Cell division cycle protein 48 homolog OS=Capsicum annuum OX=4072 GN=CAFP PE=2 S...	[more]
P54774	1.1e-66	86.11	Cell division cycle protein 48 homolog OS=Glycine max OX=3847 GN=CDC48 PE=2 SV=1	[more]

BLAST of Csor.00g202560 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6596480.1	1.67e-123	100.00	Cell division control protein 48-like D, partial [Cucurbita argyrosperma subsp. ...	[more]
XP_023539536.1	2.86e-94	98.61	cell division control protein 48 homolog D-like [Cucurbita pepo subsp. pepo]	[more]
KAG6580612.1	8.65e-94	98.58	Cell division control protein 48-like D, partial [Cucurbita argyrosperma subsp. ...	[more]
KAG6595230.1	1.00e-93	87.58	Cell division control protein 48-like D, partial [Cucurbita argyrosperma subsp. ...	[more]
XP_022859869.1	3.04e-93	95.14	cell division control protein 48 homolog D-like [Olea europaea var. sylvestris]	[more]

BLAST of Csor.00g202560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A067E2N8	1.65e-92	95.74	CDC48_N domain-containing protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN...	[more]
A0A2R6R7W6	6.71e-92	95.83	Cell division control protein 48 D like OS=Actinidia chinensis var. chinensis OX...	[more]
A0A2P5CH24	3.41e-91	95.83	AAA ATPase, CDC48 family OS=Parasponia andersonii OX=3476 GN=PanWU01x14_153160 P...	[more]
A0A072TJQ8	8.68e-91	94.41	Cell division control-like protein OS=Medicago truncatula OX=3880 GN=MTR_0041s01...	[more]
A0A5B7AQH8	2.51e-90	95.83	Putative ATPase, AAA-type, CDC48 protein isoform 2 OS=Davidia involucrata OX=169...	[more]

BLAST of Csor.00g202560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53230.1	1.9e-71	90.28	ATPase, AAA-type, CDC48 protein	[more]
AT5G03340.1	3.1e-69	88.89	ATPase, AAA-type, CDC48 protein	[more]
AT3G09840.1	3.4e-68	88.19	cell division cycle 48	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003338	CDC48, N-terminal subdomain	SMART	SM01073	CDC48_N_2	coord: 30..113 e-value: 2.4E-32 score: 123.5
IPR003338	CDC48, N-terminal subdomain	PFAM	PF02359	CDC48_N	coord: 30..111 e-value: 2.6E-24 score: 85.2
None	No IPR available	GENE3D	3.10.330.10		coord: 113..163 e-value: 9.3E-10 score: 40.4
None	No IPR available	GENE3D	2.40.40.20		coord: 7..112 e-value: 5.2E-54 score: 182.1
None	No IPR available	PANTHER	PTHR23077:SF157	SUBFAMILY NOT NAMED	coord: 5..145
None	No IPR available	PANTHER	PTHR23077	AAA-FAMILY ATPASE	coord: 5..145
IPR029067	CDC48 domain 2-like superfamily	SUPERFAMILY	54585	Cdc48 domain 2-like	coord: 112..145
IPR009010	Aspartate decarboxylase-like domain superfamily	SUPERFAMILY	50692	ADC-like	coord: 27..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g202560.m01	Csor.00g202560.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0097352	autophagosome maturation
biological_process	GO:0051301	cell division
biological_process	GO:0071712	ER-associated misfolded protein catabolic process
biological_process	GO:0051228	mitotic spindle disassembly
biological_process	GO:0030970	retrograde protein transport, ER to cytosol
biological_process	GO:0030433	ubiquitin-dependent ERAD pathway
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
cellular_component	GO:0034098	VCP-NPL4-UFD1 AAA ATPase complex
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0031593	polyubiquitin modification-dependent protein binding