Csor.00g202300 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g202300
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionLow temperature and salt responsive protein family
LocationCsor_Chr06: 1741940 .. 1745912 (-)
RNA-Seq ExpressionCsor.00g202300
SyntenyCsor.00g202300
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCTCAGCCACCTTCGTAGAAGTTCTTATCGCTATCTTCATCCCTCCCCTCGGCGTCTTCCTCCGCTATGGCATTGGGGTAATCTCCTCTCCCTCTCCTTTCGATTCGTTCCAGAATTTGATCCGAATTCAAACTTCTGATATCTTGATCGATCCATCTGATCTATGTTCGTTCGAACAACATTTTAATTAATTAATTAATTAATTTTGTTGTATAAAATTTGCAGGTAGAATTTTGGATTGATTTGGTGCTCACATTTTTGGGGTACCTTCCTGGAATTATTTACGCCGTTTATGTTTTGGTGGGGATGTGATGAAAAAAATATTGTTTTTTTATTTTTTTATTTTTTTTATTTTTTTATTTGCTGCTTTTGAGATTTTTTTTTATTTTTTTATTTATTTTAATTTTCTGTTATTTTCCTATTCTCGAGCCTGCAAACCCTGCTACTGCCATGGCTTATCTGGATGGAATCCATCTTTTTAGGGGTCTAGACCATTTGGTAGTTGTGAGATATAGGATTTTTTTTTTTTTTTAATTTTGATTTTAAATTGGAATGTAAAAAAAAATTGAGATGAAATTAATGTAACTCGGATTTTTAGGTTGGAAATTTATTTATATACCCTTCTGATCATAACTGTTGTGAATTTAACCTTTCAATTTTGTCGAGGTTACCAAAGTAATTTACTAACTTTAATATCTCCTGATATTTTGGCTCTGTTTTCAGTAATTTTTCTGGTCAAATTTACCATTTTAGCCTTGGCTCTATTTTTGGGGAAAAAATAAATCGTCTTTTAATCTTTAAATTGTCGATCTAAAGATAGAAACAATTTTTTTTTTTTTTTTTTTTTTTTACAAAATATATATATATATATAATTTTTTTAAAATAAAAGAGTTATAAAAGCATCCACTAGTAGCAGGCAAGGGAAAGGAGTTTGATTTATGTCGATTGATGTAGAGACAAACATTAATTGACAGCCACCGCAAAATTCCATTACCCTTCTGGCAACAATAAAATGGCCGCCATGTTACGGTGGTTTTACTGTACGGCTTCCCAGGTCCACCGTGCCTCCGCCGGAACCGTCGCTTCCGCCCCCATGTGGGGCAGTTTTAATGCCCCATGTGGGAAAACTTTTAACTTCCAATTCAAATTAAATTTACAATTAGTTTTAAATTTAAAAAATAATGTATCCGGTATATATATATTTAATAATTAAATAAACACTTTGTTAATTTTACAATTAAACTAAATTTAATAAATAATTACAAAATTTAGTCTTACCTTACCAAGTTTATGGTAAATATTCACGAGTTTAACTATATTTACATAAAATAAAATAAAATAATGTAAAATAATTAATATTATGGTAATTGGCGTTTAATATTATTAAATAAAATAATTAATCTTTTAAGTTTATCATTAACTTGTTTCCGGTGCCACTTGATCATGCATGTTTTACCGCTGCATTGTTGGTTACCATAAGACTGACTTACTCGAAGCTAGGAGGCAACACTAAAACCTCCCGGTAAACATTATTCAACTATATACCATATATTCTACACACACCCTGCGAGTGTGGATTCACCAATCAGCTTGTCGACTCACCAGTGTTCATAAGAGTGGGATCACTTGCTCACTGTTTCTTTAAATACTTAAACACGGGCTACTGCATCTTTTAGGTTAAGGCAAAAAACATTCCTGTACGACTGAACGATAACATCGCTACTCGAGATCATGACACATACATAGTAGTGATAGACTTGAGCTATAATAAAATGTTTTTAATTTAAACGTTTATTTATTTTATTTAACCTTTTGTTGTGTGGTTTTAAGTGTGTTTTCGAAACACGTAAGTCCATGACTGTGTTTTAACATAAAGGTTACATTTTATAGAATTTAAATGAAGTATTTCTACGTTTAATATTTATGATAGGTATACTGTAGCGACCTTAAATTAATTAGAATATATATATATATATATTAATTATGGAAAAGTATAAATTTAAATTTTCAATATTATTTATAATTCAATCATTTATGAGTCAAAATATACCAACTCTTTGAACAAATAATATATAAGAACAATCTAAGAGATTAATTAAAAAATAAATTATGTCTACCCACCACATGTGTTTTATTGACCCACCCACATTTATCTTTAAATTACGCTGAGTATCCATAGTCAAATATCCTACATCTTAACCAACCAACTATTTTGTTTTAATCCTCAATTATATCTATAATCAATTATAGATTTTATTTTAACAATTTATTAAAAAAAAAAAATTAAAAACACAAATTCAGTATTTTTATTGTAACAACGATTTAATTTATATACTTTGATATATAACAATATATCCAAATTTTTAATTTTAATATGTAACAATAGGAATTTACTGTACAACCACTAAATCACTATGATATAAAATATATTAAGATTTAATGAGTAATTCAAATATTGTTATTTAATAAAAAATAATATTTCTGTCTAAAAATTTGAAAGTAAAACCTATTAAATGATTTTTAAATGATGAAATTACGAACTTTGTCACAAAATTAGAAATTAATCATATAATTTTGAAGTTAGATTTTGGTGTTTAATGGCTTTATTGAACTATAAAGAATAATAATTATAGTTTATATAAGTTTTTTAATGAAATTTATAATTTAATACTTTTAAAATAAATAAAATAACCTTTTCGATGCAAATTAAAAATCTTGAAAATGTAATTGAATGTTAATTAATTAATATTGACGCGTGTTGTTTTCCATTGGAAAGGGGCTGAAAAGAACATGTGATTGGAGGGTGAAAACGCGCGTGAAACATGAAGCGCGTGTTACGAATAAAAACGCACCCACGTAACAGACTTTTGAAGAGCGAGAAATAGAAATTGAAAGAAACTCGGGAACTGGGCTCACAACCAGCTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGACGAAGAAGAAGAAGAAGAAGAAGAACCAGTGCTTTCTTCACCACTTCTCATTTTGGCACTTCCAATTCAATCCTAGGTTCAAGAGGAAAAAACTACCAGGTTTCTCTCATTTCAAGCGGAATAGCAGAGGTAGACTTCCATTTTCGGGTAGGATTTTAAGAACACTCTGTTTTGTCCCGCATTTCGCTTCGTCAAATGCTGTCAAGCAAGAAGAATGCCGGCTTTTTCTTTGTTTTATGCTCTCTTGGTTTTCTGTTCTAGTTGCTGAAAGATCTGAGTTCGCTTGGTGTTGCATCCGAGTATTGCTTAATATTGTGTATTTTTGGAAGTTATCATCGTGTTTTTCGGATAGGTTTGCTTTTGATGATGCAAAACTGTTTGAAGATTTGCTTGTTTTTTCCCTTGAAGCTTATTATTCCTCGCTGGCAAGTTTGATGTTGTGTTTCTGCTTCTTATTTTTTTTGTATGTTGAATGCTTTATATTCTCAGATCTGTGAGTTCAATGCGTTTGAAGCTTCAGAGCTCTTTTTTCGTTTGGATTTTCAGTTTGTTTACCCAACTTGGAGACTCTGAAAGCACTTCTTCACCATTCTCCATTAATGTTTTTGCTTCTTCCTCGGATGTGTGTTTTTTATTCAATCTACTTTTTAGGATCCACTGTTGAGTACATTGCTTTAGAGTTTGTTTAACTTTATGCGAAATGACATTTACTGAAAGAGAAATACTGCTTTTCCCAAAATCAAATACATATCCTAAAGTGAGTATGTGTTTTTCCATATCTGAGTGATTCTGGAAATTACATACTCAAAGTATTGATAATCTTCCTCTGAAGAACTGTGCGAAATACACTTCATAAAATACAGTAATTTCATGTCATAATTCTTTTGAATGAATTTCAGGGGTCCATTTGGTCACTGTAGGGCAAAAAGGAGAAGCAAAAGGGAGAAAGTAA

mRNA sequence

ATGGGCTCAGCCACCTTCGTAGAAGTTCTTATCGCTATCTTCATCCCTCCCCTCGGCGTCTTCCTCCGCTATGGCATTGGGGTAGAATTTTGGATTGATTTGGTGCTCACATTTTTGGGGTACCTTCCTGGAATTATTTACGCCGTTTATGTTTTGCTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGACGAAGAAGAAGAAGAAGAAGAAGAACCAGTGCTTTCTTCACCACTTCTCATTTTGGCACTTCCAATTCAATCCTAGGTTCAAGAGGAAAAAACTACCAGGTTTCTCTCATTTCAAGCGGAATAGCAGAGGTAGACTTCCATTTTCGGGGGTCCATTTGGTCACTGTAGGGCAAAAAGGAGAAGCAAAAGGGAGAAAGTAA

Coding sequence (CDS)

ATGGGCTCAGCCACCTTCGTAGAAGTTCTTATCGCTATCTTCATCCCTCCCCTCGGCGTCTTCCTCCGCTATGGCATTGGGGTAGAATTTTGGATTGATTTGGTGCTCACATTTTTGGGGTACCTTCCTGGAATTATTTACGCCGTTTATGTTTTGCTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGACGAAGAAGAAGAAGAAGAAGAAGAACCAGTGCTTTCTTCACCACTTCTCATTTTGGCACTTCCAATTCAATCCTAGGTTCAAGAGGAAAAAACTACCAGGTTTCTCTCATTTCAAGCGGAATAGCAGAGGTAGACTTCCATTTTCGGGGGTCCATTTGGTCACTGTAGGGCAAAAAGGAGAAGCAAAAGGGAGAAAGTAA

Protein sequence

MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLLKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKTKKKKKKKNQCFLHHFSFWHFQFNPRFKRKKLPGFSHFKRNSRGRLPFSGVHLVTVGQKGEAKGRK
Homology
[Close]
BLAST of Csor.00g202300 vs. ExPASy Swiss-Prot
Match: Q9ARD5 (Low temperature-induced protein lt101.2 OS=Hordeum vulgare OX=4513 GN=LT101.2 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 7.3e-16
Identity = 39/53 (73.58%), Postives = 48/53 (90.57%), Query Frame = 0 

Query: 1  MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLL 54
          M SATF+EV++AI +PP+GVFLRYG+ VEFWI L+LT LGY+PGIIYAVYVL+
Sbjct: 1  MASATFIEVILAIILPPVGVFLRYGLAVEFWICLLLTLLGYIPGIIYAVYVLV 53

[Close]
BLAST of Csor.00g202300 vs. ExPASy Swiss-Prot
Match: Q9ZNQ7 (Hydrophobic protein RCI2A OS=Arabidopsis thaliana OX=3702 GN=RCI2A PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 7.3e-16
Identity = 40/54 (74.07%), Postives = 48/54 (88.89%), Query Frame = 0 

Query: 1  MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLLK 55
          M +ATFV+++IAI +PPLGVFLR+G GVEFWI LVLT LGY+PGIIYA+YVL K
Sbjct: 1  MSTATFVDIIIAILLPPLGVFLRFGCGVEFWICLVLTLLGYIPGIIYAIYVLTK 54

[Close]
BLAST of Csor.00g202300 vs. ExPASy Swiss-Prot
Match: P68178 (Salt stress-induced hydrophobic peptide ESI3 OS=Thinopyrum elongatum OX=4588 GN=ESI3 PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.8e-15
Identity = 39/53 (73.58%), Postives = 48/53 (90.57%), Query Frame = 0 

Query: 1  MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLL 54
          MGSAT +EV++AI +PP+GVFLRY +GVEFWI L+LT LGY+PGIIYAVYVL+
Sbjct: 1  MGSATVLEVILAIILPPVGVFLRYKLGVEFWICLLLTILGYIPGIIYAVYVLV 53

[Close]
BLAST of Csor.00g202300 vs. ExPASy Swiss-Prot
Match: P68179 (Low temperature-induced protein lt101.1 OS=Hordeum vulgare OX=4513 GN=LT101.1 PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.8e-15
Identity = 39/53 (73.58%), Postives = 48/53 (90.57%), Query Frame = 0 

Query: 1  MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLL 54
          MGSAT +EV++AI +PP+GVFLRY +GVEFWI L+LT LGY+PGIIYAVYVL+
Sbjct: 1  MGSATVLEVILAIILPPVGVFLRYKLGVEFWICLLLTILGYIPGIIYAVYVLV 53

[Close]
BLAST of Csor.00g202300 vs. ExPASy Swiss-Prot
Match: Q9ZNS6 (Hydrophobic protein RCI2B OS=Arabidopsis thaliana OX=3702 GN=RCI2B PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.5e-13
Identity = 34/54 (62.96%), Postives = 46/54 (85.19%), Query Frame = 0 

Query: 1  MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLLK 55
          M +ATFVE+++AI +PPLGVFL++G  VEFWI L+LT  GYLPGI+YA+Y++ K
Sbjct: 1  MSTATFVEIILAIILPPLGVFLKFGCKVEFWICLILTLFGYLPGILYALYIITK 54

[Close]
BLAST of Csor.00g202300 vs. NCBI nr
Match: KAG6596455.1 (Hydrophobic protein RCI2A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 248 bits (632), Expect = 6.54e-82
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0 

Query: 1   MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLLKKKKKKK 60
           MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLLKKKKKKK
Sbjct: 1   MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLLKKKKKKK 60

Query: 61  KKKKKKKKKKKKKKKKKKKKKKKTKKKKKKKNQCFLHHFSFWHFQFNPRFKRKKLPGFSH 120
           KKKKKKKKKKKKKKKKKKKKKKKTKKKKKKKNQCFLHHFSFWHFQFNPRFKRKKLPGFSH
Sbjct: 61  KKKKKKKKKKKKKKKKKKKKKKKTKKKKKKKNQCFLHHFSFWHFQFNPRFKRKKLPGFSH 120

Query: 121 FKRNSRGRLPFSGVHLVTVGQKGEAKGRK 149
           FKRNSRGRLPFSGVHLVTVGQKGEAKGRK
Sbjct: 121 FKRNSRGRLPFSGVHLVTVGQKGEAKGRK 149

[Close]
BLAST of Csor.00g202300 vs. NCBI nr
Match: XP_022945600.1 (low temperature-induced protein lt101.2-like [Cucurbita moschata] >XP_023005767.1 low temperature-induced protein lt101.2-like [Cucurbita maxima] >XP_023540674.1 low temperature-induced protein lt101.2-like [Cucurbita pepo subsp. pepo] >KAG7027999.1 Low temperature-induced protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 105 bits (262), Expect = 9.83e-27
Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0 

Query: 1  MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLL 53
          MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVL+
Sbjct: 10 MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLV 62

[Close]
BLAST of Csor.00g202300 vs. NCBI nr
Match: XP_004137807.1 (low temperature-induced protein lt101.2 [Cucumis sativus] >KGN58938.1 hypothetical protein Csa_001360 [Cucumis sativus])

HSP 1 Score: 100 bits (250), Expect = 7.42e-25
Identity = 46/53 (86.79%), Postives = 52/53 (98.11%), Query Frame = 0 

Query: 1  MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLL 53
          MGSATF+EVL+AIFIPP+GVFLRYGIG+EFWIDLVLTF GY+PGIIYAVYVL+
Sbjct: 14 MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIIYAVYVLI 66

[Close]
BLAST of Csor.00g202300 vs. NCBI nr
Match: XP_008442650.1 (PREDICTED: low temperature-induced protein lt101.2-like [Cucumis melo])

HSP 1 Score: 100 bits (250), Expect = 7.42e-25
Identity = 46/53 (86.79%), Postives = 52/53 (98.11%), Query Frame = 0 

Query: 1  MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLL 53
          MGSATFVEVL+AIFIPP+GVFLRYGIG+EFWIDLVLTF GY+PGI+YAVYVL+
Sbjct: 14 MGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVLI 66

[Close]
BLAST of Csor.00g202300 vs. NCBI nr
Match: XP_038906189.1 (low temperature-induced protein lt101.2-like [Benincasa hispida])

HSP 1 Score: 100 bits (248), Expect = 2.01e-24
Identity = 47/53 (88.68%), Postives = 51/53 (96.23%), Query Frame = 0 

Query: 1  MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLL 53
          MGSATF+EVL+AIFIPPLGVFLRYGIG+EFWIDLVLT  GYLPGIIYAVYVL+
Sbjct: 25 MGSATFIEVLLAIFIPPLGVFLRYGIGIEFWIDLVLTLFGYLPGIIYAVYVLV 77

[Close]
BLAST of Csor.00g202300 vs. ExPASy TrEMBL
Match: A0A6J1KU26 (low temperature-induced protein lt101.2-like OS=Cucurbita maxima OX=3661 GN=LOC111498668 PE=3 SV=1)

HSP 1 Score: 105 bits (262), Expect = 4.76e-27
Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0 

Query: 1  MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLL 53
          MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVL+
Sbjct: 10 MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLV 62

[Close]
BLAST of Csor.00g202300 vs. ExPASy TrEMBL
Match: A0A6J1G1E1 (low temperature-induced protein lt101.2-like OS=Cucurbita moschata OX=3662 GN=LOC111449786 PE=3 SV=1)

HSP 1 Score: 105 bits (262), Expect = 4.76e-27
Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0 

Query: 1  MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLL 53
          MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVL+
Sbjct: 10 MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLV 62

[Close]
BLAST of Csor.00g202300 vs. ExPASy TrEMBL
Match: A0A0A0LAU7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G736860 PE=3 SV=1)

HSP 1 Score: 100 bits (250), Expect = 3.59e-25
Identity = 46/53 (86.79%), Postives = 52/53 (98.11%), Query Frame = 0 

Query: 1  MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLL 53
          MGSATF+EVL+AIFIPP+GVFLRYGIG+EFWIDLVLTF GY+PGIIYAVYVL+
Sbjct: 14 MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIIYAVYVLI 66

[Close]
BLAST of Csor.00g202300 vs. ExPASy TrEMBL
Match: A0A1S3B667 (low temperature-induced protein lt101.2-like OS=Cucumis melo OX=3656 GN=LOC103486456 PE=3 SV=1)

HSP 1 Score: 100 bits (250), Expect = 3.59e-25
Identity = 46/53 (86.79%), Postives = 52/53 (98.11%), Query Frame = 0 

Query: 1  MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLL 53
          MGSATFVEVL+AIFIPP+GVFLRYGIG+EFWIDLVLTF GY+PGI+YAVYVL+
Sbjct: 14 MGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVLI 66

[Close]
BLAST of Csor.00g202300 vs. ExPASy TrEMBL
Match: A0A6J1CX15 (low temperature-induced protein lt101.2-like OS=Momordica charantia OX=3673 GN=LOC111015073 PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 3.71e-24
Identity = 45/53 (84.91%), Postives = 52/53 (98.11%), Query Frame = 0 

Query: 1  MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLL 53
          MGSATF+EVL+A+FIPPLGVFLRYGIG+EFWI L+LTFLGYLPGI+YAVYVL+
Sbjct: 10 MGSATFLEVLLAVFIPPLGVFLRYGIGIEFWIALLLTFLGYLPGIVYAVYVLV 62

[Close]
BLAST of Csor.00g202300 vs. TAIR 10
Match: AT2G38905.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 85.1 bits (209), Expect = 5.2e-17
Identity = 38/53 (71.70%), Postives = 48/53 (90.57%), Query Frame = 0 

Query: 1  MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLL 54
          MGS TF+E+++AI +PP+GVFLRYG GVEFWI L+LT LGY+PGIIYA+YVL+
Sbjct: 1  MGSETFLEIILAILLPPVGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLV 53

[Close]
BLAST of Csor.00g202300 vs. TAIR 10
Match: AT3G05880.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 85.1 bits (209), Expect = 5.2e-17
Identity = 40/54 (74.07%), Postives = 48/54 (88.89%), Query Frame = 0 

Query: 1  MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLLK 55
          M +ATFV+++IAI +PPLGVFLR+G GVEFWI LVLT LGY+PGIIYA+YVL K
Sbjct: 1  MSTATFVDIIIAILLPPLGVFLRFGCGVEFWICLVLTLLGYIPGIIYAIYVLTK 54

[Close]
BLAST of Csor.00g202300 vs. TAIR 10
Match: AT3G05890.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 77.4 bits (189), Expect = 1.1e-14
Identity = 34/54 (62.96%), Postives = 46/54 (85.19%), Query Frame = 0 

Query: 1  MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLLK 55
          M +ATFVE+++AI +PPLGVFL++G  VEFWI L+LT  GYLPGI+YA+Y++ K
Sbjct: 1  MSTATFVEIILAIILPPLGVFLKFGCKVEFWICLILTLFGYLPGILYALYIITK 54

[Close]
BLAST of Csor.00g202300 vs. TAIR 10
Match: AT1G57550.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 75.1 bits (183), Expect = 5.3e-14
Identity = 36/54 (66.67%), Postives = 46/54 (85.19%), Query Frame = 0 

Query: 1  MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLLK 55
          MGS  F+EVL AIFIPP+GVFLRYG+G+EFW+ L+LT   ++PG+IYA+YVL K
Sbjct: 1  MGS--FLEVLCAIFIPPVGVFLRYGLGLEFWVCLLLTLFAFIPGLIYAIYVLTK 52

[Close]
BLAST of Csor.00g202300 vs. TAIR 10
Match: AT2G24040.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 56.2 bits (134), Expect = 2.6e-08
Identity = 29/46 (63.04%), Postives = 37/46 (80.43%), Query Frame = 0 

Query: 8  EVLIAIFIPPLGVFLRYG-IGVEFWIDLVLTFLGYLPGIIYAVYVL 53
          E+ IAI +PP+GV LR+G   VEF+I L+LT LGYLPGIIYA+Y +
Sbjct: 10 EIFIAILLPPVGVCLRHGCCTVEFFICLILTCLGYLPGIIYAIYAI 55

The following BLAST results are available for this feature:
BLAST of Csor.00g202300 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9ARD57.3e-1673.58Low temperature-induced protein lt101.2 OS=Hordeum vulgare OX=4513 GN=LT101.2 PE... [more]
Q9ZNQ77.3e-1674.07Hydrophobic protein RCI2A OS=Arabidopsis thaliana OX=3702 GN=RCI2A PE=2 SV=1[more]
P681782.8e-1573.58Salt stress-induced hydrophobic peptide ESI3 OS=Thinopyrum elongatum OX=4588 GN=... [more]
P681792.8e-1573.58Low temperature-induced protein lt101.1 OS=Hordeum vulgare OX=4513 GN=LT101.1 PE... [more]
Q9ZNS61.5e-1362.96Hydrophobic protein RCI2B OS=Arabidopsis thaliana OX=3702 GN=RCI2B PE=2 SV=1[more]
BLAST of Csor.00g202300 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6596455.16.54e-82100.00Hydrophobic protein RCI2A, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022945600.19.83e-2798.11low temperature-induced protein lt101.2-like [Cucurbita moschata] >XP_023005767.... [more]
XP_004137807.17.42e-2586.79low temperature-induced protein lt101.2 [Cucumis sativus] >KGN58938.1 hypothetic... [more]
XP_008442650.17.42e-2586.79PREDICTED: low temperature-induced protein lt101.2-like [Cucumis melo][more]
XP_038906189.12.01e-2488.68low temperature-induced protein lt101.2-like [Benincasa hispida][more]
BLAST of Csor.00g202300 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KU264.76e-2798.11low temperature-induced protein lt101.2-like OS=Cucurbita maxima OX=3661 GN=LOC1... [more]
A0A6J1G1E14.76e-2798.11low temperature-induced protein lt101.2-like OS=Cucurbita moschata OX=3662 GN=LO... [more]
A0A0A0LAU73.59e-2586.79Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G736860 PE=3 SV=1[more]
A0A1S3B6673.59e-2586.79low temperature-induced protein lt101.2-like OS=Cucumis melo OX=3656 GN=LOC10348... [more]
A0A6J1CX153.71e-2484.91low temperature-induced protein lt101.2-like OS=Momordica charantia OX=3673 GN=L... [more]
BLAST of Csor.00g202300 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G38905.15.2e-1771.70Low temperature and salt responsive protein family [more]
AT3G05880.15.2e-1774.07Low temperature and salt responsive protein family [more]
AT3G05890.11.1e-1462.96Low temperature and salt responsive protein family [more]
AT1G57550.15.3e-1466.67Low temperature and salt responsive protein family [more]
AT2G24040.12.6e-0863.04Low temperature and salt responsive protein family [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 50..93
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 55..94
NoneNo IPR availablePANTHERPTHR21659:SF65OS03G0286900 PROTEINcoord: 1..53
IPR000612Proteolipid membrane potential modulatorPFAMPF01679Pmp3coord: 6..52
e-value: 7.2E-18
score: 64.5
IPR000612Proteolipid membrane potential modulatorPANTHERPTHR21659HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATEDcoord: 1..53
IPR000612Proteolipid membrane potential modulatorPROSITEPS01309UPF0057coord: 10..25

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g202300.m01Csor.00g202300.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane