Csor.00g201150 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g201150
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr03: 5392055 .. 5394513 (+)
RNA-Seq ExpressionCsor.00g201150
SyntenyCsor.00g201150
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGATGCCTCGTTCTTCATACCAAGATGACTCCAATTCTTCTCGATTAGGGGTTTCCACTTTTCCCCTCTTTTTGGTTCAACAGTTTCTGTACAGAAAAAATATATTAGAATCTGGTAAGATCATGCCTTTTCTTTTATTTCTTTTAATATTTCATATATATATATATAATGAAATTGAATTAAAGAACGACAGAATCAATCAAGTACCGGAGGTTTTCCAACGTTGGTTTTTACCCAGAAATGATCAGTATTGTAATTGGCCTCAGTTTATGAAACTCTCTTCCTTTGGACTCAACAAGGAAACTTTACGTGCTGATAACGAAAGTGTATTGTTTTGTGGCGGTGGTGTCATGTGTAATGCTGCTGCTTTCTTAAATATGGATTTGGTAGATCACTAGTGTACTTGTAATTAGTTGCATTCATATCGAATGGGATGCCACGGGAGGCATACCAAGTGTACGGACTGCTCTGTTGCCTGTTGTTCTAAGCTTTACGAGCATTAGTGTGATTTCAAAATATATGCAGATTTTGGTGGACTGGATGGATACTTCGGTGCAGCGAAGTTATTGCGTGGTAGGGCTGTGCGTGGAGGTTTGTGGTTGGAACTTGATTATTGGGTTTTGGTTGGCGTGGCCATGGGAGGTCTGTGGATGAAGTTATGTTGTTTGTCATTTTCATACACCACATAGGGTGCAAACATGGAGCCTTCCAACTCTGTTCGTCTCTTCCAAATTTATAATCTTCATTCTTCATCCAACCCTATCCTTTACTTTTTGCAAAAAAAGAGTTATCACCTATTTATATCGATTAGAGAGAGGAACGAATATGAGTGCGAACGTTGGATTCGGAGGGGATAGATTGTGAAATCACACGTCCGTTGGAGAAGGGAACAAACATTATTTATAAGGGTGTGAAAACCTCTTCTTAGCAGACGCGGTTTTGTAGGCTTGGGTCGTTACAAATGTTATCAGAGCAAGACACTGAGTAGTATGCCAACAAAGACGTTGGGCCTCGAAGGGGCTGGACACCGGATGGTGTACCAGCAAGGACGCTGGACCCCGAAGGGGGAAGTGAACACCGGGTAGTGTGGTAGTGTGCCAGCGAGGACGCTAGGTCTTGAAGGAGTGGACACTAGACAGTGTGCCAACGAAAACACTGAAGAGTCGGGGAGTGCTTCAAACCTTCCATAATTTCTTACTACATTTCACTCTATTAATTTCTTACAGTTTTTTTTTTGTTAGGAATGAATTCTATCAATTTAGTGTAACAAAAAAGAACCGTATCCACTTATTTTATAGTTTGATAGTTTATTGGTTGAGATTCGAGTCAAATGGGTAAATTATTGGTCAAAAAGGTTAGAAAAGTGGAGATCTATAGAAATTCTCTCTCACAGGTAGAGGCACAGAGTGGTTTCCGGGATTTGTCTATTCCATTTGGACTTCCAAAGAGAATTCAACATGGATCATTATTTGGCCCAACAGACAGAAACTGAAGGGCAATAATTTTGGCCCTTTTCCTTTGAAGGAAACAAGAAAAAGATAAGAATGAAGGGCCCACAAATGATCTATTCTGATCAAAGCAATGCCCTTCTGGTTTGTTCATTCCAAGAACAGTAGCAGAAACGGATTCAGAATTCATTCAGCTTCTTCATCACTTCATCCATTCTCAGCGCTGCAAAAAGGTGGATAGAAAGATTGAGAAGTGGTGTGGTCTTCCCCTGTTGGCAAGCAATGCTCCATTCCACATTGGTAGGCCCTCCACAAACCCATCCTTTTCTTTCCTTTTTTTTTTTTTTTTTTTCTAGTTCCATATTCCCTGTGCTTCACAAAAAGAAATGAATGGAAATAGAGCTCCACAGTACACTGATTCACACCAACTTAAGACAGAATAATGTCAAGCTTGTTTAGAGGCAATTAGTGGCCCGAATTCTGGAGGCAAGAAAGCCTAAAAGAGATGAAACAAGAAAAAAGGAGAGGGTATTGGTACTTTGTAATGATGTTATTATCAAAGCGTAAATGGGATGAAAATGAAGGGTGTGGATTAGCAAAGACTCATGAGACGCACGCTTCAAGACAAAGGCTATCCATTCCTCTTAACCTTCTGCATTACAATCTAAAACGCTTTCCATTAGACTTAATTTCATCAACTAATTGATGTGTGGGACCCCTTTTGATCACTTACCTAAACCCTTTGTTATAAAGCTTATCAACTTAACCAAACCCAAATCTCAATCTTATTTTACTCATTCATCTGCTTTTTTCTTTTCCTAAGTTGTCTTGAATTTCAGGTCAGGGAATCTGGACACACAGAAATCTATTACTGTGGGAACAGAATATGAGGAAAGGTAGTTGTTTTCTCACTCTTTTAGAAAGTGTTTTCATTCATTGAATTGATGAATTTTGGTTAATTCAGATTGAATATTTCACCTGATGAAGAAGGGAGAGATGAAGTTTAA

mRNA sequence

ATGTCGATGCCTCGTTCTTCATACCAAGATGACTCCAATTCTTCTCGATTAGGGGTTTCCACTTTTCCCCTCTTTTTGGTTCAACAGTTTCTGTACAGAAAAAATATATTAGAATCTGATTTTGGTGGACTGGATGGATACTTCGGTGCAGCGAAGTTATTGCGTGGTAGGGCTGTGCGTGGAGGTTTGTGGTTGGAACTTGATTATTGGGTTTTGGTTGGCGTGGCCATGGGAGTAGCAGAAACGGATTCAGAATTCATTCAGCTTCTTCATCACTTCATCCATTCTCAGCGCTGCAAAAAGGTGGATAGAAAGATTGAGAAGTGGTGTGGTCTTCCCCTGTTGGCAAGCAATGCTCCATTCCACATTGTTGTCTTGAATTTCAGGTCAGGGAATCTGGACACACAGAAATCTATTACTGTGGGAACAGAATATGAGGAAAGATTGAATATTTCACCTGATGAAGAAGGGAGAGATGAAGTTTAA

Coding sequence (CDS)

ATGTCGATGCCTCGTTCTTCATACCAAGATGACTCCAATTCTTCTCGATTAGGGGTTTCCACTTTTCCCCTCTTTTTGGTTCAACAGTTTCTGTACAGAAAAAATATATTAGAATCTGATTTTGGTGGACTGGATGGATACTTCGGTGCAGCGAAGTTATTGCGTGGTAGGGCTGTGCGTGGAGGTTTGTGGTTGGAACTTGATTATTGGGTTTTGGTTGGCGTGGCCATGGGAGTAGCAGAAACGGATTCAGAATTCATTCAGCTTCTTCATCACTTCATCCATTCTCAGCGCTGCAAAAAGGTGGATAGAAAGATTGAGAAGTGGTGTGGTCTTCCCCTGTTGGCAAGCAATGCTCCATTCCACATTGTTGTCTTGAATTTCAGGTCAGGGAATCTGGACACACAGAAATCTATTACTGTGGGAACAGAATATGAGGAAAGATTGAATATTTCACCTGATGAAGAAGGGAGAGATGAAGTTTAA

Protein sequence

MSMPRSSYQDDSNSSRLGVSTFPLFLVQQFLYRKNILESDFGGLDGYFGAAKLLRGRAVRGGLWLELDYWVLVGVAMGVAETDSEFIQLLHHFIHSQRCKKVDRKIEKWCGLPLLASNAPFHIVVLNFRSGNLDTQKSITVGTEYEERLNISPDEEGRDEV
Homology
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BLAST of Csor.00g201150 vs. NCBI nr
Match: KAG6603738.1 (hypothetical protein SDJN03_04347, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 330 bits (845), Expect = 5.34e-114
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0 

Query: 1   MSMPRSSYQDDSNSSRLGVSTFPLFLVQQFLYRKNILESDFGGLDGYFGAAKLLRGRAVR 60
           MSMPRSSYQDDSNSSRLGVSTFPLFLVQQFLYRKNILESDFGGLDGYFGAAKLLRGRAVR
Sbjct: 1   MSMPRSSYQDDSNSSRLGVSTFPLFLVQQFLYRKNILESDFGGLDGYFGAAKLLRGRAVR 60

Query: 61  GGLWLELDYWVLVGVAMGVAETDSEFIQLLHHFIHSQRCKKVDRKIEKWCGLPLLASNAP 120
           GGLWLELDYWVLVGVAMGVAETDSEFIQLLHHFIHSQRCKKVDRKIEKWCGLPLLASNAP
Sbjct: 61  GGLWLELDYWVLVGVAMGVAETDSEFIQLLHHFIHSQRCKKVDRKIEKWCGLPLLASNAP 120

Query: 121 FHIVVLNFRSGNLDTQKSITVGTEYEERLNISPDEEGRDEV 161
           FHIVVLNFRSGNLDTQKSITVGTEYEERLNISPDEEGRDEV
Sbjct: 121 FHIVVLNFRSGNLDTQKSITVGTEYEERLNISPDEEGRDEV 161

The following BLAST results are available for this feature:
BLAST of Csor.00g201150 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g201150 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6603738.15.34e-114100.00hypothetical protein SDJN03_04347, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g201150 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g201150 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g201150.m02Csor.00g201150.m02mRNA