Csor.00g200680 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g200680
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Zinc finger CCHC domain-containing protein 10
Location	Csor_Chr03: 5159482 .. 5160208 (+)
RNA-Seq Expression	Csor.00g200680
Synteny	Csor.00g200680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTTGGGAAGGGTTTGAAAACTTTGGATTGCTTAAGGGGAAGATTGCTTGCAGAAAGACAAGCTTCAAGATCGGCCAAAGAAGAGGCACAGCTTATGGGGGAAAAGGTAATGTTCTTCACCATTGTTCACATTCTGCATTTCTTTTTCCAATGTGTGATTTTCACGAGGTTTTTTCTGGTGTTCTGAAGTTGATAGAGTTGGAGAATCAGATTAGAAAGGAGACAGAGCTAAGGAACAAAGCTGAGAAGAGGCTTAAACTCTTGATAAAGAAGCTTGAATCCTTCAACATTGCCTCCTCAACATCATTAGTAGCCTCAGAAATTTGGACAAATTTCTCAGCCTTGAAGGAAACAGAAAACCAAGAATCAAGATCAGAGAATGTGGAATCAACGATCTCGAAAAATCAATGCGAGAAAGTTCCAGAAATCGCCACATCCAAACAGCGCGATGAGAAAGAACCTAATCAGAATACTCCAGATCGAGCAAATTCAAGCCCTAACTCCGAATCTCGCAACAATTCCTGCACCGATCCCCACCGATCTTCTCAAATCCCTCAAAGAAAAGATCAGAGGTACTAAAATTCCCGCTCCCGCTCCCCCTCAAACTCGCAAAACTTCACCATTTACATATGAATTAACCTAAGCACCGCCCTAATTACGATTACAATTGTTTCAAGCTTTTCAGGATAAGTAAAGGAGAAAGAGAACAAGCATTACACTGA

mRNA sequence

ATGGAAGTTGGGAAGGGTTTGAAAACTTTGGATTGCTTAAGGGGAAGATTGCTTGCAGAAAGACAAGCTTCAAGATCGGCCAAAGAAGAGGCACAGCTTATGGGGGAAAAGTTGATAGAGTTGGAGAATCAGATTAGAAAGGAGACAGAGCTAAGGAACAAAGCTGAGAAGAGGCTTAAACTCTTGATAAAGAAGCTTGAATCCTTCAACATTGCCTCCTCAACATCATTAGTAGCCTCAGAAATTTGGACAAATTTCTCAGCCTTGAAGGAAACAGAAAACCAAGAATCAAGATCAGAGAATGTGGAATCAACGATCTCGAAAAATCAATGCGAGAAAGTTCCAGAAATCGCCACATCCAAACAGCGCGATGAGAAAGAACCTAATCAGAATACTCCAGATCGAGCAAATTCAAGCCCTAACTCCGAATCTCGCAACAATTCCTGCACCGATCCCCACCGATCTTCTCAAATCCCTCAAAGAAAAGATCAGAGGATAAGTAAAGGAGAAAGAGAACAAGCATTACACTGA

Coding sequence (CDS)

ATGGAAGTTGGGAAGGGTTTGAAAACTTTGGATTGCTTAAGGGGAAGATTGCTTGCAGAAAGACAAGCTTCAAGATCGGCCAAAGAAGAGGCACAGCTTATGGGGGAAAAGTTGATAGAGTTGGAGAATCAGATTAGAAAGGAGACAGAGCTAAGGAACAAAGCTGAGAAGAGGCTTAAACTCTTGATAAAGAAGCTTGAATCCTTCAACATTGCCTCCTCAACATCATTAGTAGCCTCAGAAATTTGGACAAATTTCTCAGCCTTGAAGGAAACAGAAAACCAAGAATCAAGATCAGAGAATGTGGAATCAACGATCTCGAAAAATCAATGCGAGAAAGTTCCAGAAATCGCCACATCCAAACAGCGCGATGAGAAAGAACCTAATCAGAATACTCCAGATCGAGCAAATTCAAGCCCTAACTCCGAATCTCGCAACAATTCCTGCACCGATCCCCACCGATCTTCTCAAATCCCTCAAAGAAAAGATCAGAGGATAAGTAAAGGAGAAAGAGAACAAGCATTACACTGA

Protein sequence

MEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLKLLIKKLESFNIASSTSLVASEIWTNFSALKETENQESRSENVESTISKNQCEKVPEIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQRISKGEREQALH

Homology

[Close]

BLAST of Csor.00g200680 vs. NCBI nr
Match: KAG6603693.1 (hypothetical protein SDJN03_04302, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 313 bits (803), Expect = 4.22e-107
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 1   MEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLK 60
           MEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLK
Sbjct: 1   MEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLK 60

Query: 61  LLIKKLESFNIASSTSLVASEIWTNFSALKETENQESRSENVESTISKNQCEKVPEIATS 120
           LLIKKLESFNIASSTSLVASEIWTNFSALKETENQESRSENVESTISKNQCEKVPEIATS
Sbjct: 61  LLIKKLESFNIASSTSLVASEIWTNFSALKETENQESRSENVESTISKNQCEKVPEIATS 120

Query: 121 KQRDEKEPNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQRISKGEREQALH 176
           KQRDEKEPNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQRISKGEREQALH
Sbjct: 121 KQRDEKEPNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQRISKGEREQALH 176

[Close]

BLAST of Csor.00g200680 vs. NCBI nr
Match: XP_022949859.1 (uncharacterized protein LOC111453128 [Cucurbita moschata])

HSP 1 Score: 309 bits (791), Expect = 4.03e-105
Identity = 174/176 (98.86%), Postives = 175/176 (99.43%), Query Frame = 0


Query: 1   MEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLK 60
           M+VGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLK
Sbjct: 11  MKVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLK 70

Query: 61  LLIKKLESFNIASSTSLVASEIWTNFSALKETENQESRSENVESTISKNQCEKVPEIATS 120
           LLIKKLESFNIASSTSLVASEIWTNFSALKETENQESRSENVESTISKNQCEKVPEIATS
Sbjct: 71  LLIKKLESFNIASSTSLVASEIWTNFSALKETENQESRSENVESTISKNQCEKVPEIATS 130

Query: 121 KQRDEKEPNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQRISKGEREQALH 176
           KQRDEKEPNQNTPDRANSSPNSESRNNSCTDP RSSQIPQRKDQRISKGEREQALH
Sbjct: 131 KQRDEKEPNQNTPDRANSSPNSESRNNSCTDPRRSSQIPQRKDQRISKGEREQALH 186

[Close]

BLAST of Csor.00g200680 vs. NCBI nr
Match: KAG7033870.1 (hypothetical protein SDJN02_03595 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 293 bits (751), Expect = 4.37e-99
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 1   MEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLK 60
           MEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLK
Sbjct: 17  MEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLK 76

Query: 61  LLIKKLESFNIASSTSLVASEIWTNFSALKETENQESRSENVESTISKNQCEKVPEIATS 120
           LLIKKLESFNIASSTSLVASEIWTNFSALKETENQESRSENVESTISKNQCEKVPEIATS
Sbjct: 77  LLIKKLESFNIASSTSLVASEIWTNFSALKETENQESRSENVESTISKNQCEKVPEIATS 136

Query: 121 KQRDEKEPNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQR 165
           KQRDEKEPNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQR
Sbjct: 137 KQRDEKEPNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQR 181

[Close]

BLAST of Csor.00g200680 vs. NCBI nr
Match: XP_023543783.1 (uncharacterized protein LOC111803551 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 270 bits (691), Expect = 6.26e-90
Identity = 158/173 (91.33%), Postives = 162/173 (93.64%), Query Frame = 0


Query: 1   MEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLK 60
           MEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIR+ETELRNKAEKRLK
Sbjct: 11  MEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRRETELRNKAEKRLK 70

Query: 61  LLIKKLESFNIASSTSLVASEIWT------NFSALKETENQESRSENVESTISKNQCEKV 120
           LLIKKLES NIASSTSLVASEI T      N SALKETENQESRSENV+STIS+NQCEKV
Sbjct: 71  LLIKKLESLNIASSTSLVASEISTLSDSSTNSSALKETENQESRSENVDSTISENQCEKV 130

Query: 121 PEIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQRIS 167
           PEIATSKQRDEK+PNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQ  S
Sbjct: 131 PEIATSKQRDEKKPNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQSFS 183

[Close]

BLAST of Csor.00g200680 vs. NCBI nr
Match: XP_022977780.1 (uncharacterized protein LOC111477978 [Cucurbita maxima])

HSP 1 Score: 253 bits (646), Expect = 4.31e-83
Identity = 151/171 (88.30%), Postives = 156/171 (91.23%), Query Frame = 0


Query: 1   MEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLK 60
           MEVGKGLKTLDCLRGRLLAER+ASRSAKEEAQLM EKLIELENQ RKETELRNKAEKRLK
Sbjct: 11  MEVGKGLKTLDCLRGRLLAEREASRSAKEEAQLMEEKLIELENQNRKETELRNKAEKRLK 70

Query: 61  LLIKKLESFNIASSTSLVASEIWT------NFSALKETENQESRSENVESTISKNQCEKV 120
           LLIKKLES NIASSTSLVASEI T      N S LKETENQESRS+ V+STIS+NQCEKV
Sbjct: 71  LLIKKLESLNIASSTSLVASEISTLSESSTNSSTLKETENQESRSKKVDSTISENQCEKV 130

Query: 121 PEIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQR 165
           PEIATSKQRDEK+PNQNTPDRANSSPNSES NNSCTDPHRSSQI QRKDQR
Sbjct: 131 PEIATSKQRDEKKPNQNTPDRANSSPNSESPNNSCTDPHRSSQILQRKDQR 181

[Close]

BLAST of Csor.00g200680 vs. ExPASy TrEMBL
Match: A0A6J1GE52 (uncharacterized protein LOC111453128 OS=Cucurbita moschata OX=3662 GN=LOC111453128 PE=4 SV=1)

HSP 1 Score: 309 bits (791), Expect = 1.95e-105
Identity = 174/176 (98.86%), Postives = 175/176 (99.43%), Query Frame = 0


Query: 1   MEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLK 60
           M+VGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLK
Sbjct: 11  MKVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLK 70

Query: 61  LLIKKLESFNIASSTSLVASEIWTNFSALKETENQESRSENVESTISKNQCEKVPEIATS 120
           LLIKKLESFNIASSTSLVASEIWTNFSALKETENQESRSENVESTISKNQCEKVPEIATS
Sbjct: 71  LLIKKLESFNIASSTSLVASEIWTNFSALKETENQESRSENVESTISKNQCEKVPEIATS 130

Query: 121 KQRDEKEPNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQRISKGEREQALH 176
           KQRDEKEPNQNTPDRANSSPNSESRNNSCTDP RSSQIPQRKDQRISKGEREQALH
Sbjct: 131 KQRDEKEPNQNTPDRANSSPNSESRNNSCTDPRRSSQIPQRKDQRISKGEREQALH 186

[Close]

BLAST of Csor.00g200680 vs. ExPASy TrEMBL
Match: A0A6J1INA8 (uncharacterized protein LOC111477978 OS=Cucurbita maxima OX=3661 GN=LOC111477978 PE=4 SV=1)

HSP 1 Score: 253 bits (646), Expect = 2.08e-83
Identity = 151/171 (88.30%), Postives = 156/171 (91.23%), Query Frame = 0


Query: 1   MEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLK 60
           MEVGKGLKTLDCLRGRLLAER+ASRSAKEEAQLM EKLIELENQ RKETELRNKAEKRLK
Sbjct: 11  MEVGKGLKTLDCLRGRLLAEREASRSAKEEAQLMEEKLIELENQNRKETELRNKAEKRLK 70

Query: 61  LLIKKLESFNIASSTSLVASEIWT------NFSALKETENQESRSENVESTISKNQCEKV 120
           LLIKKLES NIASSTSLVASEI T      N S LKETENQESRS+ V+STIS+NQCEKV
Sbjct: 71  LLIKKLESLNIASSTSLVASEISTLSESSTNSSTLKETENQESRSKKVDSTISENQCEKV 130

Query: 121 PEIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQR 165
           PEIATSKQRDEK+PNQNTPDRANSSPNSES NNSCTDPHRSSQI QRKDQR
Sbjct: 131 PEIATSKQRDEKKPNQNTPDRANSSPNSESPNNSCTDPHRSSQILQRKDQR 181

[Close]

BLAST of Csor.00g200680 vs. ExPASy TrEMBL
Match: A0A6J1CRU4 (uncharacterized protein LOC111013694 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111013694 PE=4 SV=1)

HSP 1 Score: 203 bits (516), Expect = 1.61e-63
Identity = 130/181 (71.82%), Postives = 144/181 (79.56%), Query Frame = 0


Query: 1   MEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLK 60
           ME G+GL TLDCLRGRLLAERQASRSAKEEA+ MG+K+IELENQIRKETELRNKAEKRLK
Sbjct: 16  MEGGEGLITLDCLRGRLLAERQASRSAKEEAEFMGKKMIELENQIRKETELRNKAEKRLK 75

Query: 61  LLIKKLESFNIAS----STSLVASEIWTNFSALKETENQESRSENVESTISKNQCEK-VP 120
           LLIKKLES NIAS    S +  +SEI TN SA KETE+QESRSE       +NQ EK VP
Sbjct: 76  LLIKKLESLNIASISVISENSTSSEISTNSSATKETEDQESRSE-------ENQSEKAVP 135

Query: 121 EIATSKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQRISKGEREQAL 176
           +IA  KQRDE + NQN PD+ NSSPN+ES NNSCTDPHR SQI + +DQ   KGERE AL
Sbjct: 136 DIAAPKQRDEDKTNQNAPDQTNSSPNTESPNNSCTDPHRYSQISRSRDQSRIKGEREGAL 189

[Close]

BLAST of Csor.00g200680 vs. ExPASy TrEMBL
Match: A0A1S3BHR6 (uncharacterized protein LOC103489769 OS=Cucumis melo OX=3656 GN=LOC103489769 PE=4 SV=1)

HSP 1 Score: 197 bits (500), Expect = 3.09e-60
Identity = 120/168 (71.43%), Postives = 137/168 (81.55%), Query Frame = 0


Query: 1   MEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLK 60
           M+V KGLKTL+CLRGRLLAERQASRSAKEEA+LMGEKL++LENQIRKETELRNKAEKRL+
Sbjct: 16  MDVEKGLKTLECLRGRLLAERQASRSAKEEAELMGEKLLKLENQIRKETELRNKAEKRLE 75

Query: 61  LLIKKLESFNIAS-STSLVASEIWTNFSALKETENQESRSENVESTISKNQCEKVPEIAT 120
           LLIKKLES N AS S +  ASEI TN S  KETE+QE +SE + STI +NQC+K+  I T
Sbjct: 76  LLIKKLESLNNASTSVTSTASEISTNSSPSKETESQELKSEKLVSTIPENQCQKILNITT 135

Query: 121 SKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQRIS 167
           SKQ DEK+PN+NTPDR NS PNSES NN   DP  +S+IP  KDQ  S
Sbjct: 136 SKQHDEKKPNRNTPDRLNSIPNSESPNNFYIDPRHTSEIPHTKDQSFS 183

[Close]

BLAST of Csor.00g200680 vs. ExPASy TrEMBL
Match: A0A5A7TZE9 (Zinc finger CCHC domain-containing protein 10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G001350 PE=4 SV=1)

HSP 1 Score: 197 bits (500), Expect = 3.09e-60
Identity = 120/168 (71.43%), Postives = 137/168 (81.55%), Query Frame = 0


Query: 1   MEVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLK 60
           M+V KGLKTL+CLRGRLLAERQASRSAKEEA+LMGEKL++LENQIRKETELRNKAEKRL+
Sbjct: 16  MDVEKGLKTLECLRGRLLAERQASRSAKEEAELMGEKLLKLENQIRKETELRNKAEKRLE 75

Query: 61  LLIKKLESFNIAS-STSLVASEIWTNFSALKETENQESRSENVESTISKNQCEKVPEIAT 120
           LLIKKLES N AS S +  ASEI TN S  KETE+QE +SE + STI +NQC+K+  I T
Sbjct: 76  LLIKKLESLNNASTSVTSTASEISTNSSPSKETESQELKSEKLVSTIPENQCQKILNITT 135

Query: 121 SKQRDEKEPNQNTPDRANSSPNSESRNNSCTDPHRSSQIPQRKDQRIS 167
           SKQ DEK+PN+NTPDR NS PNSES NN   DP  +S+IP  KDQ  S
Sbjct: 136 SKQHDEKKPNRNTPDRLNSIPNSESPNNFYIDPRHTSEIPHTKDQSFS 183

[Close]

BLAST of Csor.00g200680 vs. TAIR 10
Match: AT2G37300.1 (unknown protein; Has 93 Blast hits to 62 proteins in 29 species: Archae - 0; Bacteria - 6; Metazoa - 13; Fungi - 19; Plants - 25; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). )

HSP 1 Score: 79.0 bits (193), Expect = 4.4e-15
Identity = 58/137 (42.34%), Postives = 82/137 (59.85%), Query Frame = 0


Query: 2   EVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLKL 61
           E  +G +T++CLRGRLLAERQ SRSAKEEA+L+  K+ ELE  +++E  LR KAEKRLKL
Sbjct: 6   EKEEGQRTVECLRGRLLAERQVSRSAKEEAELITRKMEELERNLKEEIRLREKAEKRLKL 65

Query: 62  LIKKLE-------SFNIASSTSLVASEIWTNFSALKETENQES----------RSENVES 121
           L+KKLE       S   +SS     S + T+ S  +E E  +S           +ENV S
Sbjct: 66  LMKKLEFIKGSRSSEGSSSSEVSCISSVCTSASKEEEEETHDSGAVDEGKTDHATENVAS 125

[Close]

BLAST of Csor.00g200680 vs. TAIR 10
Match: AT2G37300.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages. )

HSP 1 Score: 79.0 bits (193), Expect = 4.4e-15
Identity = 58/137 (42.34%), Postives = 82/137 (59.85%), Query Frame = 0


Query: 2   EVGKGLKTLDCLRGRLLAERQASRSAKEEAQLMGEKLIELENQIRKETELRNKAEKRLKL 61
           E  +G +T++CLRGRLLAERQ SRSAKEEA+L+  K+ ELE  +++E  LR KAEKRLKL
Sbjct: 85  EKEEGQRTVECLRGRLLAERQVSRSAKEEAELITRKMEELERNLKEEIRLREKAEKRLKL 144

Query: 62  LIKKLE-------SFNIASSTSLVASEIWTNFSALKETENQES----------RSENVES 121
           L+KKLE       S   +SS     S + T+ S  +E E  +S           +ENV S
Sbjct: 145 LMKKLEFIKGSRSSEGSSSSEVSCISSVCTSASKEEEEETHDSGAVDEGKTDHATENVAS 204

The following BLAST results are available for this feature:

BLAST of Csor.00g200680 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g200680 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6603693.1	4.22e-107	100.00	hypothetical protein SDJN03_04302, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022949859.1	4.03e-105	98.86	uncharacterized protein LOC111453128 [Cucurbita moschata]	[more]
KAG7033870.1	4.37e-99	100.00	hypothetical protein SDJN02_03595 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023543783.1	6.26e-90	91.33	uncharacterized protein LOC111803551 [Cucurbita pepo subsp. pepo]	[more]
XP_022977780.1	4.31e-83	88.30	uncharacterized protein LOC111477978 [Cucurbita maxima]	[more]

BLAST of Csor.00g200680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GE52	1.95e-105	98.86	uncharacterized protein LOC111453128 OS=Cucurbita moschata OX=3662 GN=LOC1114531...	[more]
A0A6J1INA8	2.08e-83	88.30	uncharacterized protein LOC111477978 OS=Cucurbita maxima OX=3661 GN=LOC111477978...	[more]
A0A6J1CRU4	1.61e-63	71.82	uncharacterized protein LOC111013694 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A1S3BHR6	3.09e-60	71.43	uncharacterized protein LOC103489769 OS=Cucumis melo OX=3656 GN=LOC103489769 PE=...	[more]
A0A5A7TZE9	3.09e-60	71.43	Zinc finger CCHC domain-containing protein 10 OS=Cucumis melo var. makuwa OX=119...	[more]

BLAST of Csor.00g200680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37300.1	4.4e-15	42.34	unknown protein; Has 93 Blast hits to 62 proteins in 29 species: Archae - 0; Bac...	[more]
AT2G37300.2	4.4e-15	42.34	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 24..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..155
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..176
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..176
None	No IPR available	PANTHER	PTHR33701:SF2	TRANSMEMBRANE PROTEIN	coord: 5..164
None	No IPR available	PANTHER	PTHR33701	TRANSMEMBRANE PROTEIN	coord: 5..164

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g200680.m01	Csor.00g200680.m01	mRNA