Csor.00g200670 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g200670
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	dirigent protein 17-like
Location	Csor_Chr03: 5154784 .. 5155095 (-)
RNA-Seq Expression	Csor.00g200670
Synteny	Csor.00g200670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTGGCGATCGGTATTACTACGGCGTCATAATCGAGTTCGACAAAGATACGGGATGGTACAGAGTGGAGTATGAAGACGGAGACTTCGAAGATCTCGATTGGCATGGACTCGAACAGGTGCTTTTGCCCATGGACATTACAGTTCCATTGAAAGCATTAGCATTGAAAACTCTGAAGAGAAACAGGAAGGCCCAGAAGAACAGGAAGAACAAGACTGGAAACAGACGGGGCGATCCCAAAGAAATGGAAGGCAGGAGGAAGAAGAGCGTGGAAAGTATAGTTGTGTCACCTACAGAGCCTGCAGGCTGA

mRNA sequence

ATGTTTGGCGATCGGTATTACTACGGCGTCATAATCGAGTTCGACAAAGATACGGGATGGTACAGAGTGGAGTATGAAGACGGAGACTTCGAAGATCTCGATTGGCATGGACTCGAACAGGTGCTTTTGCCCATGGACATTACAGTTCCATTGAAAGCATTAGCATTGAAAACTCTGAAGAGAAACAGGAAGGCCCAGAAGAACAGGAAGAACAAGACTGGAAACAGACGGGGCGATCCCAAAGAAATGGAAGGCAGGAGGAAGAAGAGCGTGGAAAGTATAGTTGTGTCACCTACAGAGCCTGCAGGCTGA

Coding sequence (CDS)

ATGTTTGGCGATCGGTATTACTACGGCGTCATAATCGAGTTCGACAAAGATACGGGATGGTACAGAGTGGAGTATGAAGACGGAGACTTCGAAGATCTCGATTGGCATGGACTCGAACAGGTGCTTTTGCCCATGGACATTACAGTTCCATTGAAAGCATTAGCATTGAAAACTCTGAAGAGAAACAGGAAGGCCCAGAAGAACAGGAAGAACAAGACTGGAAACAGACGGGGCGATCCCAAAGAAATGGAAGGCAGGAGGAAGAAGAGCGTGGAAAGTATAGTTGTGTCACCTACAGAGCCTGCAGGCTGA

Protein sequence

MFGDRYYYGVIIEFDKDTGWYRVEYEDGDFEDLDWHGLEQVLLPMDITVPLKALALKTLKRNRKAQKNRKNKTGNRRGDPKEMEGRRKKSVESIVVSPTEPAG

Homology

[Close]

BLAST of Csor.00g200670 vs. ExPASy Swiss-Prot
Match: F4J4N3 (Dirigent protein 17 OS=Arabidopsis thaliana OX=3702 GN=DIR17 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 5.7e-12
Identity = 31/45 (68.89%), Postives = 36/45 (80.00%), Query Frame = 0


Query: 2   FGDRYYYGVIIEFDKDTGWYRVEYEDGDFEDLDWHGLEQVLLPMD 47
           F  RYY G + +FDK +GWYRVEYEDGD EDLDW  LE+VLLP+D
Sbjct: 68  FLGRYYSGTVTKFDKQSGWYRVEYEDGDSEDLDWSELEEVLLPLD 112

[Close]

BLAST of Csor.00g200670 vs. NCBI nr
Match: KAG6603692.1 (Dirigent protein 17, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 205 bits (522), Expect = 1.31e-66
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MFGDRYYYGVIIEFDKDTGWYRVEYEDGDFEDLDWHGLEQVLLPMDITVPLKALALKTLK 60
           MFGDRYYYGVIIEFDKDTGWYRVEYEDGDFEDLDWHGLEQVLLPMDITVPLKALALKTLK
Sbjct: 1   MFGDRYYYGVIIEFDKDTGWYRVEYEDGDFEDLDWHGLEQVLLPMDITVPLKALALKTLK 60

Query: 61  RNRKAQKNRKNKTGNRRGDPKEMEGRRKKSVESIVVSPTEPAG 103
           RNRKAQKNRKNKTGNRRGDPKEMEGRRKKSVESIVVSPTEPAG
Sbjct: 61  RNRKAQKNRKNKTGNRRGDPKEMEGRRKKSVESIVVSPTEPAG 103

[Close]

BLAST of Csor.00g200670 vs. NCBI nr
Match: XP_022949860.1 (dirigent protein 17-like [Cucurbita moschata] >XP_022949861.1 dirigent protein 17-like [Cucurbita moschata] >XP_022949862.1 dirigent protein 17-like [Cucurbita moschata] >XP_022949863.1 dirigent protein 17-like [Cucurbita moschata])

HSP 1 Score: 205 bits (522), Expect = 1.24e-65
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MFGDRYYYGVIIEFDKDTGWYRVEYEDGDFEDLDWHGLEQVLLPMDITVPLKALALKTLK 60
           MFGDRYYYGVIIEFDKDTGWYRVEYEDGDFEDLDWHGLEQVLLPMDITVPLKALALKTLK
Sbjct: 70  MFGDRYYYGVIIEFDKDTGWYRVEYEDGDFEDLDWHGLEQVLLPMDITVPLKALALKTLK 129

Query: 61  RNRKAQKNRKNKTGNRRGDPKEMEGRRKKSVESIVVSPTEPAG 103
           RNRKAQKNRKNKTGNRRGDPKEMEGRRKKSVESIVVSPTEPAG
Sbjct: 130 RNRKAQKNRKNKTGNRRGDPKEMEGRRKKSVESIVVSPTEPAG 172

[Close]

BLAST of Csor.00g200670 vs. NCBI nr
Match: KAG7033869.1 (Dirigent protein 17 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 205 bits (522), Expect = 3.71e-65
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MFGDRYYYGVIIEFDKDTGWYRVEYEDGDFEDLDWHGLEQVLLPMDITVPLKALALKTLK 60
           MFGDRYYYGVIIEFDKDTGWYRVEYEDGDFEDLDWHGLEQVLLPMDITVPLKALALKTLK
Sbjct: 104 MFGDRYYYGVIIEFDKDTGWYRVEYEDGDFEDLDWHGLEQVLLPMDITVPLKALALKTLK 163

Query: 61  RNRKAQKNRKNKTGNRRGDPKEMEGRRKKSVESIVVSPTEPAG 103
           RNRKAQKNRKNKTGNRRGDPKEMEGRRKKSVESIVVSPTEPAG
Sbjct: 164 RNRKAQKNRKNKTGNRRGDPKEMEGRRKKSVESIVVSPTEPAG 206

[Close]

BLAST of Csor.00g200670 vs. NCBI nr
Match: XP_022977781.1 (dirigent protein 17-like [Cucurbita maxima] >XP_022977782.1 dirigent protein 17-like [Cucurbita maxima] >XP_022977783.1 dirigent protein 17-like [Cucurbita maxima] >XP_022977784.1 dirigent protein 17-like [Cucurbita maxima])

HSP 1 Score: 200 bits (508), Expect = 1.67e-63
Identity = 101/102 (99.02%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 1   MFGDRYYYGVIIEFDKDTGWYRVEYEDGDFEDLDWHGLEQVLLPMDITVPLKALALKTLK 60
           MFGDRYYYGVIIEFDKDTGWYRVEYEDGDFEDLDWHGLEQVLLPMDITVPLKALALKTLK
Sbjct: 70  MFGDRYYYGVIIEFDKDTGWYRVEYEDGDFEDLDWHGLEQVLLPMDITVPLKALALKTLK 129

Query: 61  RNRKAQKNRKNKTGNRRGDPKEMEGRRKKSVESIVVSPTEPA 102
           RNRKAQKNRKNKT NRRGDPKEMEGRRKKSVESIVVSPTEPA
Sbjct: 130 RNRKAQKNRKNKTRNRRGDPKEMEGRRKKSVESIVVSPTEPA 171

[Close]

BLAST of Csor.00g200670 vs. NCBI nr
Match: XP_023543784.1 (dirigent protein 17-like [Cucurbita pepo subsp. pepo] >XP_023543785.1 dirigent protein 17-like [Cucurbita pepo subsp. pepo] >XP_023543786.1 dirigent protein 17-like [Cucurbita pepo subsp. pepo] >XP_023543787.1 dirigent protein 17-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 196 bits (499), Expect = 3.93e-62
Identity = 100/102 (98.04%), Postives = 100/102 (98.04%), Query Frame = 0


Query: 1   MFGDRYYYGVIIEFDKDTGWYRVEYEDGDFEDLDWHGLEQVLLPMDITVPLKALALKTLK 60
           MFGDRYYYGVIIEFDKDTGWYRVEYEDGDFEDLDWHGLEQVLLPMDITVPLKALALKTLK
Sbjct: 70  MFGDRYYYGVIIEFDKDTGWYRVEYEDGDFEDLDWHGLEQVLLPMDITVPLKALALKTLK 129

Query: 61  RNRKAQKNRKNKTGNRRGDPKEMEGRRKKSVESIVVSPTEPA 102
           RNRKAQKNRKNKTGNRR D KEMEGRRKKSVESIVVSPTEPA
Sbjct: 130 RNRKAQKNRKNKTGNRRVDAKEMEGRRKKSVESIVVSPTEPA 171

[Close]

BLAST of Csor.00g200670 vs. ExPASy TrEMBL
Match: A0A6J1GD98 (dirigent protein 17-like OS=Cucurbita moschata OX=3662 GN=LOC111453130 PE=4 SV=1)

HSP 1 Score: 205 bits (522), Expect = 5.98e-66
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MFGDRYYYGVIIEFDKDTGWYRVEYEDGDFEDLDWHGLEQVLLPMDITVPLKALALKTLK 60
           MFGDRYYYGVIIEFDKDTGWYRVEYEDGDFEDLDWHGLEQVLLPMDITVPLKALALKTLK
Sbjct: 70  MFGDRYYYGVIIEFDKDTGWYRVEYEDGDFEDLDWHGLEQVLLPMDITVPLKALALKTLK 129

Query: 61  RNRKAQKNRKNKTGNRRGDPKEMEGRRKKSVESIVVSPTEPAG 103
           RNRKAQKNRKNKTGNRRGDPKEMEGRRKKSVESIVVSPTEPAG
Sbjct: 130 RNRKAQKNRKNKTGNRRGDPKEMEGRRKKSVESIVVSPTEPAG 172

[Close]

BLAST of Csor.00g200670 vs. ExPASy TrEMBL
Match: A0A6J1IJE9 (dirigent protein 17-like OS=Cucurbita maxima OX=3661 GN=LOC111477979 PE=4 SV=1)

HSP 1 Score: 200 bits (508), Expect = 8.11e-64
Identity = 101/102 (99.02%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 1   MFGDRYYYGVIIEFDKDTGWYRVEYEDGDFEDLDWHGLEQVLLPMDITVPLKALALKTLK 60
           MFGDRYYYGVIIEFDKDTGWYRVEYEDGDFEDLDWHGLEQVLLPMDITVPLKALALKTLK
Sbjct: 70  MFGDRYYYGVIIEFDKDTGWYRVEYEDGDFEDLDWHGLEQVLLPMDITVPLKALALKTLK 129

Query: 61  RNRKAQKNRKNKTGNRRGDPKEMEGRRKKSVESIVVSPTEPA 102
           RNRKAQKNRKNKT NRRGDPKEMEGRRKKSVESIVVSPTEPA
Sbjct: 130 RNRKAQKNRKNKTRNRRGDPKEMEGRRKKSVESIVVSPTEPA 171

[Close]

BLAST of Csor.00g200670 vs. ExPASy TrEMBL
Match: A0A1S4DXX2 (dirigent protein 17-like OS=Cucumis melo OX=3656 GN=LOC103489761 PE=4 SV=1)

HSP 1 Score: 187 bits (476), Expect = 6.04e-59
Identity = 95/102 (93.14%), Postives = 98/102 (96.08%), Query Frame = 0


Query: 1   MFGDRYYYGVIIEFDKDTGWYRVEYEDGDFEDLDWHGLEQVLLPMDITVPLKALALKTLK 60
           +FGDRYYYGVIIEFDK TGWYRVEYEDGDFEDLDWHGLEQVLLPMDIT+PLKALALKTLK
Sbjct: 70  LFGDRYYYGVIIEFDKVTGWYRVEYEDGDFEDLDWHGLEQVLLPMDITIPLKALALKTLK 129

Query: 61  RNRKAQKNRKNKTGNRRGDPKEMEGRRKKSVESIVVSPTEPA 102
           R+RKAQKNRKNKTGNRRGDPKEMEGRRKKSVES VV PTE A
Sbjct: 130 RSRKAQKNRKNKTGNRRGDPKEMEGRRKKSVESKVVLPTEHA 171

[Close]

BLAST of Csor.00g200670 vs. ExPASy TrEMBL
Match: A0A5A7TWN5 (Dirigent protein 17-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G001360 PE=4 SV=1)

HSP 1 Score: 187 bits (476), Expect = 6.04e-59
Identity = 95/102 (93.14%), Postives = 98/102 (96.08%), Query Frame = 0


Query: 1   MFGDRYYYGVIIEFDKDTGWYRVEYEDGDFEDLDWHGLEQVLLPMDITVPLKALALKTLK 60
           +FGDRYYYGVIIEFDK TGWYRVEYEDGDFEDLDWHGLEQVLLPMDIT+PLKALALKTLK
Sbjct: 70  LFGDRYYYGVIIEFDKVTGWYRVEYEDGDFEDLDWHGLEQVLLPMDITIPLKALALKTLK 129

Query: 61  RNRKAQKNRKNKTGNRRGDPKEMEGRRKKSVESIVVSPTEPA 102
           R+RKAQKNRKNKTGNRRGDPKEMEGRRKKSVES VV PTE A
Sbjct: 130 RSRKAQKNRKNKTGNRRGDPKEMEGRRKKSVESKVVLPTEHA 171

[Close]

BLAST of Csor.00g200670 vs. ExPASy TrEMBL
Match: A0A0A0KZE7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293090 PE=4 SV=1)

HSP 1 Score: 180 bits (457), Expect = 4.71e-56
Identity = 92/102 (90.20%), Postives = 96/102 (94.12%), Query Frame = 0


Query: 1   MFGDRYYYGVIIEFDKDTGWYRVEYEDGDFEDLDWHGLEQVLLPMDITVPLKALALKTLK 60
           +F DRYYYGVIIEFDK TGWYRVEYEDGDFEDLDWHGLEQVLLPMDIT+PLKALALKTLK
Sbjct: 70  LFVDRYYYGVIIEFDKVTGWYRVEYEDGDFEDLDWHGLEQVLLPMDITIPLKALALKTLK 129

Query: 61  RNRKAQKNRKNKTGNRRGDPKEMEGRRKKSVESIVVSPTEPA 102
           R+RKAQKNRKNKTGN RGDPKEMEGRRKKSVES V+ PTE A
Sbjct: 130 RSRKAQKNRKNKTGNGRGDPKEMEGRRKKSVESKVLLPTEHA 171

[Close]

BLAST of Csor.00g200670 vs. TAIR 10
Match: AT3G58090.1 (Disease resistance-responsive (dirigent-like protein) family protein )

HSP 1 Score: 71.6 bits (174), Expect = 4.1e-13
Identity = 31/45 (68.89%), Postives = 36/45 (80.00%), Query Frame = 0


Query: 2   FGDRYYYGVIIEFDKDTGWYRVEYEDGDFEDLDWHGLEQVLLPMD 47
           F  RYY G + +FDK +GWYRVEYEDGD EDLDW  LE+VLLP+D
Sbjct: 68  FLGRYYSGTVTKFDKQSGWYRVEYEDGDSEDLDWSELEEVLLPLD 112

The following BLAST results are available for this feature:

BLAST of Csor.00g200670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4J4N3	5.7e-12	68.89	Dirigent protein 17 OS=Arabidopsis thaliana OX=3702 GN=DIR17 PE=2 SV=1	[more]

BLAST of Csor.00g200670 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6603692.1	1.31e-66	100.00	Dirigent protein 17, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022949860.1	1.24e-65	100.00	dirigent protein 17-like [Cucurbita moschata] >XP_022949861.1 dirigent protein 1...	[more]
KAG7033869.1	3.71e-65	100.00	Dirigent protein 17 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022977781.1	1.67e-63	99.02	dirigent protein 17-like [Cucurbita maxima] >XP_022977782.1 dirigent protein 17-...	[more]
XP_023543784.1	3.93e-62	98.04	dirigent protein 17-like [Cucurbita pepo subsp. pepo] >XP_023543785.1 dirigent p...	[more]

BLAST of Csor.00g200670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GD98	5.98e-66	100.00	dirigent protein 17-like OS=Cucurbita moschata OX=3662 GN=LOC111453130 PE=4 SV=1	[more]
A0A6J1IJE9	8.11e-64	99.02	dirigent protein 17-like OS=Cucurbita maxima OX=3661 GN=LOC111477979 PE=4 SV=1	[more]
A0A1S4DXX2	6.04e-59	93.14	dirigent protein 17-like OS=Cucumis melo OX=3656 GN=LOC103489761 PE=4 SV=1	[more]
A0A5A7TWN5	6.04e-59	93.14	Dirigent protein 17-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A0A0KZE7	4.71e-56	90.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293090 PE=4 SV=1	[more]

BLAST of Csor.00g200670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G58090.1	4.1e-13	68.89	Disease resistance-responsive (dirigent-like protein) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 56..76
None	No IPR available	GENE3D	2.30.30.140		coord: 2..40 e-value: 1.5E-6 score: 29.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..93
None	No IPR available	PANTHER	PTHR37384	OS01G0835600 PROTEIN	coord: 2..90
None	No IPR available	PANTHER	PTHR37384:SF1	OS01G0835600 PROTEIN	coord: 2..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g200670.m01	Csor.00g200670.m01	mRNA