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Csor.00g200540 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGACGACCCCTCTGCTTCATACATCCACATGGTATTTCTTTTCTTTTTCTTTTATTTTATTTATCTCTTTAAATTTCGTTGATTTATGTGATGAGCGGACGGATGATGTGCGGGCGTATGATTTTTGTGGTGTAGGTGCATCACCTGATCGAACAGTGTATAATTTTCAACATGAACAAAGAAGAGTGCATGGAAGCTCTCTCCAAACATGCCAATATCAAACCGGTCATCACTTCCACCGGTTCGTTTTCTCTCACGTGATGTGCACGGACTTCGACTCCTTTTTTTTTTTTTAATTTTGTAAAATGTGTGCAGTGTGGAATGAACTGGAGAAGGAGAACAAGGAGTTCTTCGAAGCGTATAAGAAGAAACGACGTGACGTTACGACGAGGGCTGCTGATGGGAATTCCACCGACACGTCGGATTTCAACTTGCTGGATTCGGGGAATACGACGTCGGGTAGGTAG ATGGAAGACGACCCCTCTGCTTCATACATCCACATGGTGCATCACCTGATCGAACAGTGTATAATTTTCAACATGAACAAAGAAGAGTGCATGGAAGCTCTCTCCAAACATGCCAATATCAAACCGGTCATCACTTCCACCGTGTGGAATGAACTGGAGAAGGAGAACAAGGAGTTCTTCGAAGCGTATAAGAAGAAACGACGTGACGTTACGACGAGGGCTGCTGATGGGAATTCCACCGACACGTCGGATTTCAACTTGCTGGATTCGGGGAATACGACGTCGGGTAGGTAG ATGGAAGACGACCCCTCTGCTTCATACATCCACATGGTGCATCACCTGATCGAACAGTGTATAATTTTCAACATGAACAAAGAAGAGTGCATGGAAGCTCTCTCCAAACATGCCAATATCAAACCGGTCATCACTTCCACCGTGTGGAATGAACTGGAGAAGGAGAACAAGGAGTTCTTCGAAGCGTATAAGAAGAAACGACGTGACGTTACGACGAGGGCTGCTGATGGGAATTCCACCGACACGTCGGATTTCAACTTGCTGGATTCGGGGAATACGACGTCGGGTAGGTAG MEDDPSASYIHMVHHLIEQCIIFNMNKEECMEALSKHANIKPVITSTVWNELEKENKEFFEAYKKKRRDVTTRAADGNSTDTSDFNLLDSGNTTSGR Homology
BLAST of Csor.00g200540 vs. NCBI nr
Match: KAG6603679.1 (hypothetical protein SDJN03_04288, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 194 bits (493), Expect = 2.24e-62 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0
BLAST of Csor.00g200540 vs. NCBI nr
Match: XP_023544368.1 (uncharacterized protein LOC111803972 [Cucurbita pepo subsp. pepo] >KAG7033856.1 hypothetical protein SDJN02_03581 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 192 bits (489), Expect = 9.15e-62 Identity = 96/97 (98.97%), Postives = 97/97 (100.00%), Query Frame = 0
BLAST of Csor.00g200540 vs. NCBI nr
Match: XP_022977252.1 (uncharacterized protein LOC111477620 [Cucurbita maxima]) HSP 1 Score: 188 bits (477), Expect = 6.20e-60 Identity = 93/97 (95.88%), Postives = 96/97 (98.97%), Query Frame = 0
BLAST of Csor.00g200540 vs. NCBI nr
Match: XP_022950247.1 (uncharacterized protein LOC111453395 [Cucurbita moschata]) HSP 1 Score: 169 bits (427), Expect = 1.88e-52 Identity = 85/86 (98.84%), Postives = 86/86 (100.00%), Query Frame = 0
BLAST of Csor.00g200540 vs. NCBI nr
Match: XP_038883060.1 (uncharacterized protein LOC120074114 [Benincasa hispida]) HSP 1 Score: 169 bits (427), Expect = 2.80e-52 Identity = 83/95 (87.37%), Postives = 90/95 (94.74%), Query Frame = 0
BLAST of Csor.00g200540 vs. ExPASy TrEMBL
Match: A0A6J1IHY2 (uncharacterized protein LOC111477620 OS=Cucurbita maxima OX=3661 GN=LOC111477620 PE=4 SV=1) HSP 1 Score: 188 bits (477), Expect = 3.00e-60 Identity = 93/97 (95.88%), Postives = 96/97 (98.97%), Query Frame = 0
BLAST of Csor.00g200540 vs. ExPASy TrEMBL
Match: A0A6J1GEA1 (uncharacterized protein LOC111453395 OS=Cucurbita moschata OX=3662 GN=LOC111453395 PE=4 SV=1) HSP 1 Score: 169 bits (427), Expect = 9.12e-53 Identity = 85/86 (98.84%), Postives = 86/86 (100.00%), Query Frame = 0
BLAST of Csor.00g200540 vs. ExPASy TrEMBL
Match: A0A0A0KZG8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293290 PE=4 SV=1) HSP 1 Score: 157 bits (397), Expect = 4.80e-48 Identity = 79/95 (83.16%), Postives = 89/95 (93.68%), Query Frame = 0
BLAST of Csor.00g200540 vs. ExPASy TrEMBL
Match: A0A6J1IAZ7 (uncharacterized protein LOC111471258 OS=Cucurbita maxima OX=3661 GN=LOC111471258 PE=4 SV=1) HSP 1 Score: 157 bits (396), Expect = 9.00e-48 Identity = 80/96 (83.33%), Postives = 88/96 (91.67%), Query Frame = 0
BLAST of Csor.00g200540 vs. ExPASy TrEMBL
Match: A0A6J1HDK1 (uncharacterized protein LOC111463185 OS=Cucurbita moschata OX=3662 GN=LOC111463185 PE=4 SV=1) HSP 1 Score: 154 bits (390), Expect = 5.96e-47 Identity = 79/95 (83.16%), Postives = 87/95 (91.58%), Query Frame = 0
BLAST of Csor.00g200540 vs. TAIR 10
Match: AT5G02580.1 (Plant protein 1589 of unknown function ) HSP 1 Score: 114.8 bits (286), Expect = 4.0e-26 Identity = 50/66 (75.76%), Postives = 60/66 (90.91%), Query Frame = 0
BLAST of Csor.00g200540 vs. TAIR 10
Match: AT3G55240.1 (Plant protein 1589 of unknown function ) HSP 1 Score: 110.9 bits (276), Expect = 5.7e-25 Identity = 50/67 (74.63%), Postives = 61/67 (91.04%), Query Frame = 0
BLAST of Csor.00g200540 vs. TAIR 10
Match: AT3G28990.1 (Plant protein 1589 of unknown function ) HSP 1 Score: 97.1 bits (240), Expect = 8.5e-21 Identity = 43/66 (65.15%), Postives = 53/66 (80.30%), Query Frame = 0
BLAST of Csor.00g200540 vs. TAIR 10
Match: AT5G02580.2 (Plant protein 1589 of unknown function ) HSP 1 Score: 79.3 bits (194), Expect = 1.8e-15 Identity = 34/41 (82.93%), Postives = 39/41 (95.12%), Query Frame = 0
BLAST of Csor.00g200540 vs. TAIR 10
Match: AT1G10657.2 (Plant protein 1589 of unknown function ) HSP 1 Score: 76.3 bits (186), Expect = 1.6e-14 Identity = 31/56 (55.36%), Postives = 44/56 (78.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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