Csor.00g200200 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g200200
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like
Location	Csor_Chr03: 4937941 .. 4939720 (+)
RNA-Seq Expression	Csor.00g200200
Synteny	Csor.00g200200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTGCCAGTCGCACATCCGACGACAGCCAAGAAGGTTGTATCATGATAAGACGACGTCGTCGCAGAGCATCGAGACAAGCATTGGGAGGAATCATGTGCATTCTGCTTCCTCGGCCTCAGCCAGGTGCCATCGGAAGGATTAAACAAGAAACATAAAAACAGAGATAGATAAATACGACGCATAAACAAATACTAAAGATTAAAATATTATTCTCAAAGTCCTCGAATCCTACCTCTCCTCCCACTCTCCCACTTTCCTTTTATTTATCGAACGCCATCCAAAACAGATGCCTCCGGTTCTTGCCTTCCTCCCATTTCCATCTCTCTTTCTTCTCCGACGATGGACCAAAAGAACCACACCCGCCATCATCCATCTCACGGTGGCACTCACAGGTACGTCCTACATCTCTCTCATCCTTTCTCTCTGCTTTGGCCGCCATGGCTGTCTGTGAACCAAGCTGATGCAAAACATATTGAAAGGAAACACAGATCTTGAAGCTCCTGCCTTTATGTGCAGTTTCTTGATGGGTTGAGTTCTGGGTTTGTTTGTTTCTTAGAAGTTTCACTCTCTTTCTCTCTGTTTTCTGCATTTTGATTGTGTTTTGAGGAGGAGCTTTGATCTTTTAGGGGGAAAATTGGCTTCCTATGCCTAATCTAACTTATAATCATGGTTTTCTGGTGGCCTGGCCTGGCTGATAATCATGATTTCAGTGCCTTTTTTTGGGTAGGATTTGATGTCTTGTCTATCTCTTAGAAATTTAGATATTTTAATGATTGGATATTTGGGATTTTCTTCTTCTATTTATAGTTTTTGATCCTTACAAAAGCCCTGATCAGATTAAAAAAAACGACAAAATCATTATCTAAGGGCTTCTTCAATTTCCAAGATAAGGAATAAACATAGAACTTTAGATCAGCGCTAAAATACTATGCAATGAAACTTGTCACTATTGTAATTAAACCGACCTCAATGGACGTACTAAGAAAAATTCAAATTCTTGCAGCTTCTCTGGCTTTCAACCATGGGATACTGAAAGCTTTGATGTAAAGAAGAAAAGAAAACTACTGTTTGAGCAACTAAGTTTACCCACACCTAAGCTACCATGTTGGGGTCCAAGTTCAAGTTCGATTAGCTTTCCCTATGGAGAAGATAGCTTCAAGTTCAACAAAAAACGCCCAAAAGAAGAAGGAGAAAGCAGCCTTACAAAAATGGCAACAGAAGGAAAGGATATGTCCACAGAAGAGGTTCGAATACAGGGTGAGAAAGATGGTATCAAAGATAAGTTGGACCTAAACTATGGCCATGAGGAAGATCTATTGGAATTTGGAAGCCATGGAAATTCCAGCATTTATGAGCAATGTTGCAGTGACAGTACTCAAAATTTGCTCCTCCCCACAGACTCCAAGCATGACTTTGTTTTGTCATCTGGGAGATGGAGCATAGACCCAGGTATTGAAATTCTCAGTTCATCTTTGCATGTTATGTAACGATTTAAATGAAGTAAGAGGCAAAGTTCAATGATGGAATTAAGATTTAAACCAGAGATCAAAACGGTTCAAGAGATGACATCAGGGATCATAGGATTTCTTTTTTTTTTTTTTTCGTTTCTTTTTTCACAAAATTTGTGATGTTGGGTGAGTTTTATATTTTTTCCATACACAAATTAGATCTGAATCATTCAAATATGCAGAGGCAGAGTCCAAGATTATCACACCAACCATTGATCAAGAGTTTGAGCAGTACTTTTCTGGGATTTTGCCATCCCTGGATCCCTGA

mRNA sequence

ATGCGTGCCAGTCGCACATCCGACGACAGCCAAGAAGGTTGTATCATGATAAGACGACGTCGTCGCAGAGCATCGAGACAAGCATTGGGAGGAATCATGTGCATTCTGCTTCCTCGGCCTCAGCCAGATGCCTCCGGTTCTTGCCTTCCTCCCATTTCCATCTCTCTTTCTTCTCCGACGATGGACCAAAAGAACCACACCCGCCATCATCCATCTCACGGTGGCACTCACAGCTTCTCTGGCTTTCAACCATGGGATACTGAAAGCTTTGATGTAAAGAAGAAAAGAAAACTACTGTTTGAGCAACTAAGTTTACCCACACCTAAGCTACCATGTTGGGGTCCAAGTTCAAGTTCGATTAGCTTTCCCTATGGAGAAGATAGCTTCAAGTTCAACAAAAAACGCCCAAAAGAAGAAGGAGAAAGCAGCCTTACAAAAATGGCAACAGAAGGAAAGGATATGTCCACAGAAGAGGTTCGAATACAGGGTGAGAAAGATGGTATCAAAGATAAGTTGGACCTAAACTATGGCCATGAGGAAGATCTATTGGAATTTGGAAGCCATGGAAATTCCAGCATTTATGAGCAATGTTGCAGTGACAGTACTCAAAATTTGCTCCTCCCCACAGACTCCAAGCATGACTTTGTTTTGTCATCTGGGAGATGGAGCATAGACCCAGAGGCAGAGTCCAAGATTATCACACCAACCATTGATCAAGAGTTTGAGCAGTACTTTTCTGGGATTTTGCCATCCCTGGATCCCTGA

Coding sequence (CDS)

ATGCGTGCCAGTCGCACATCCGACGACAGCCAAGAAGGTTGTATCATGATAAGACGACGTCGTCGCAGAGCATCGAGACAAGCATTGGGAGGAATCATGTGCATTCTGCTTCCTCGGCCTCAGCCAGATGCCTCCGGTTCTTGCCTTCCTCCCATTTCCATCTCTCTTTCTTCTCCGACGATGGACCAAAAGAACCACACCCGCCATCATCCATCTCACGGTGGCACTCACAGCTTCTCTGGCTTTCAACCATGGGATACTGAAAGCTTTGATGTAAAGAAGAAAAGAAAACTACTGTTTGAGCAACTAAGTTTACCCACACCTAAGCTACCATGTTGGGGTCCAAGTTCAAGTTCGATTAGCTTTCCCTATGGAGAAGATAGCTTCAAGTTCAACAAAAAACGCCCAAAAGAAGAAGGAGAAAGCAGCCTTACAAAAATGGCAACAGAAGGAAAGGATATGTCCACAGAAGAGGTTCGAATACAGGGTGAGAAAGATGGTATCAAAGATAAGTTGGACCTAAACTATGGCCATGAGGAAGATCTATTGGAATTTGGAAGCCATGGAAATTCCAGCATTTATGAGCAATGTTGCAGTGACAGTACTCAAAATTTGCTCCTCCCCACAGACTCCAAGCATGACTTTGTTTTGTCATCTGGGAGATGGAGCATAGACCCAGAGGCAGAGTCCAAGATTATCACACCAACCATTGATCAAGAGTTTGAGCAGTACTTTTCTGGGATTTTGCCATCCCTGGATCCCTGA

Protein sequence

MRASRTSDDSQEGCIMIRRRRRRASRQALGGIMCILLPRPQPDASGSCLPPISISLSSPTMDQKNHTRHHPSHGGTHSFSGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSISFPYGEDSFKFNKKRPKEEGESSLTKMATEGKDMSTEEVRIQGEKDGIKDKLDLNYGHEEDLLEFGSHGNSSIYEQCCSDSTQNLLLPTDSKHDFVLSSGRWSIDPEAESKIITPTIDQEFEQYFSGILPSLDP

Homology

[Close]

BLAST of Csor.00g200200 vs. ExPASy Swiss-Prot
Match: A8MR65 (Protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE OS=Arabidopsis thaliana OX=3702 GN=FHL PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.2e-05
Identity = 52/181 (28.73%), Postives = 81/181 (44.75%), Query Frame = 0


Query: 88  ESFDVKKKRKLLFEQLS-LPTPKLPCWGPSSSSIS-------FPYGEDSFKFNKKRPKEE 147
           ES D  KKRKL  E+   LP PK  C    +S ++         Y E S+     +  +E
Sbjct: 26  ESLDTSKKRKLHAEESDLLPLPKHFCSEHQASLVNSSCPSSVIDYAECSYAMENTKTSDE 85

Query: 148 GESS---------LTKMATEGKDMSTEEVRIQGEKDGIKDKLDLNYGHEEDLLEFGSHGN 207
             SS         + K +      S+         +    K+D  +  +ED  +F +H  
Sbjct: 86  ASSSASFTGPSLYMFKDSIYSTGSSSSGYAATSSIEQCFSKVD--HKTQEDTQDF-THME 145

Query: 208 SSIYE-QCCSDSTQNLLLPTDSKHDFVLSSGRWSIDPEAESKIIT-PTIDQEFEQYFSGI 250
              ++ +   +  Q +L P +S   ++LSS RWS+  +   +  T PTIDQEFEQYFS +
Sbjct: 146 FIYHDSEFAVEDLQEVLNPVES---YILSSARWSVSNQDSKEATTKPTIDQEFEQYFSTL 200

[Close]

BLAST of Csor.00g200200 vs. NCBI nr
Match: KAG6603645.1 (Protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 516 bits (1330), Expect = 7.40e-185
Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0


Query: 1   MRASRTSDDSQEGCIMIRRRRRRASRQALGGIMCILLPRPQPDASGSCLPPISISLSSPT 60
           MRASRTSDDSQEGCIMIRRRRRRASRQALGGIMCILLPRPQPDASGSCLPPISISLSSPT
Sbjct: 1   MRASRTSDDSQEGCIMIRRRRRRASRQALGGIMCILLPRPQPDASGSCLPPISISLSSPT 60

Query: 61  MDQKNHTRHHPSHGGTHSFSGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI 120
           MDQKNHTRHHPSHGGTHSFSGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI
Sbjct: 61  MDQKNHTRHHPSHGGTHSFSGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI 120

Query: 121 SFPYGEDSFKFNKKRPKEEGESSLTKMATEGKDMSTEEVRIQGEKDGIKDKLDLNYGHEE 180
           SFPYGEDSFKFNKKRPKEEGESSLTKMATEGKDMSTEEVRIQGEKDGIKDKLDLNYGHEE
Sbjct: 121 SFPYGEDSFKFNKKRPKEEGESSLTKMATEGKDMSTEEVRIQGEKDGIKDKLDLNYGHEE 180

Query: 181 DLLEFGSHGNSSIYEQCCSDSTQNLLLPTDSKHDFVLSSGRWSIDPEAESKIITPTIDQE 240
           DLLEFGSHGNSSIYEQCCSDSTQNLLLPTDSKHDFVLSSGRWSIDPEAESKIITPTIDQE
Sbjct: 181 DLLEFGSHGNSSIYEQCCSDSTQNLLLPTDSKHDFVLSSGRWSIDPEAESKIITPTIDQE 240

Query: 241 FEQYFSGILPSLDP 254
           FEQYFSGILPSLDP
Sbjct: 241 FEQYFSGILPSLDP 254

[Close]

BLAST of Csor.00g200200 vs. NCBI nr
Match: KAG7033829.1 (hypothetical protein SDJN02_03554, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 401 bits (1031), Expect = 3.19e-140
Identity = 193/194 (99.48%), Postives = 193/194 (99.48%), Query Frame = 0


Query: 61  MDQKNHTRHHPSHGGTHSFSGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI 120
           MDQKNHTRHHPSHGGTHSFSGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI
Sbjct: 1   MDQKNHTRHHPSHGGTHSFSGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI 60

Query: 121 SFPYGEDSFKFNKKRPKEEGESSLTKMATEGKDMSTEEVRIQGEKDGIKDKLDLNYGHEE 180
           SFPYGEDS KFNKKRPKEEGESSLTKMATEGKDMSTEEVRIQGEKDGIKDKLDLNYGHEE
Sbjct: 61  SFPYGEDSLKFNKKRPKEEGESSLTKMATEGKDMSTEEVRIQGEKDGIKDKLDLNYGHEE 120

Query: 181 DLLEFGSHGNSSIYEQCCSDSTQNLLLPTDSKHDFVLSSGRWSIDPEAESKIITPTIDQE 240
           DLLEFGSHGNSSIYEQCCSDSTQNLLLPTDSKHDFVLSSGRWSIDPEAESKIITPTIDQE
Sbjct: 121 DLLEFGSHGNSSIYEQCCSDSTQNLLLPTDSKHDFVLSSGRWSIDPEAESKIITPTIDQE 180

Query: 241 FEQYFSGILPSLDP 254
           FEQYFSGILPSLDP
Sbjct: 181 FEQYFSGILPSLDP 194

[Close]

BLAST of Csor.00g200200 vs. NCBI nr
Match: XP_023544624.1 (protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 391 bits (1004), Expect = 4.01e-136
Identity = 189/194 (97.42%), Postives = 191/194 (98.45%), Query Frame = 0


Query: 61  MDQKNHTRHHPSHGGTHSFSGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI 120
           MDQKNH+RHHPSHGGTHSF GFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI
Sbjct: 1   MDQKNHSRHHPSHGGTHSFPGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI 60

Query: 121 SFPYGEDSFKFNKKRPKEEGESSLTKMATEGKDMSTEEVRIQGEKDGIKDKLDLNYGHEE 180
           SFPYGEDSFKFNKKRPKEEGESSLTKMATEGKDMSTEEVRIQGEKDGIKD LDLNYGHEE
Sbjct: 61  SFPYGEDSFKFNKKRPKEEGESSLTKMATEGKDMSTEEVRIQGEKDGIKDNLDLNYGHEE 120

Query: 181 DLLEFGSHGNSSIYEQCCSDSTQNLLLPTDSKHDFVLSSGRWSIDPEAESKIITPTIDQE 240
           DLLEFG+HGNSSIYEQCCSDSTQNLLLPTDSKHDFVLSSGRWSIDPEAESKIITPTIDQE
Sbjct: 121 DLLEFGNHGNSSIYEQCCSDSTQNLLLPTDSKHDFVLSSGRWSIDPEAESKIITPTIDQE 180

Query: 241 FEQYFSGILPSLDP 254
           FEQYFSGILP LDP
Sbjct: 181 FEQYFSGILP-LDP 193

[Close]

BLAST of Csor.00g200200 vs. NCBI nr
Match: XP_022950730.1 (protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like [Cucurbita moschata])

HSP 1 Score: 384 bits (987), Expect = 1.56e-133
Identity = 188/194 (96.91%), Postives = 188/194 (96.91%), Query Frame = 0


Query: 61  MDQKNHTRHHPSHGGTHSFSGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI 120
           MDQKNH RHHPSHGGTHSFS FQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI
Sbjct: 1   MDQKNHPRHHPSHGGTHSFSDFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI 60

Query: 121 SFPYGEDSFKFNKKRPKEEGESSLTKMATEGKDMSTEEVRIQGEKDGIKDKLDLNYGHEE 180
           SFPYGEDSFKFNKKRPKE GESSLTKMATEGKDMSTEEVRIQGEKDGIKDKLDLNYGHEE
Sbjct: 61  SFPYGEDSFKFNKKRPKE-GESSLTKMATEGKDMSTEEVRIQGEKDGIKDKLDLNYGHEE 120

Query: 181 DLLEFGSHGNSSIYEQCCSDSTQNLLLPTDSKHDFVLSSGRWSIDPEAESKIITPTIDQE 240
           DLLEFGSHGNSSIYE  CSDSTQNLLLPTDS HDFVLSSGRWSIDPEAESKIITPTIDQE
Sbjct: 121 DLLEFGSHGNSSIYEHYCSDSTQNLLLPTDSNHDFVLSSGRWSIDPEAESKIITPTIDQE 180

Query: 241 FEQYFSGILPSLDP 254
           FEQYFSGILPSLDP
Sbjct: 181 FEQYFSGILPSLDP 193

[Close]

BLAST of Csor.00g200200 vs. NCBI nr
Match: XP_022978296.1 (protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like [Cucurbita maxima])

HSP 1 Score: 372 bits (955), Expect = 1.02e-128
Identity = 182/195 (93.33%), Postives = 185/195 (94.87%), Query Frame = 0


Query: 61  MDQKNHTRHHPSHGGTHSFSGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI 120
           MDQKNH RHHPSHGGTHSFSGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI
Sbjct: 1   MDQKNHPRHHPSHGGTHSFSGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI 60

Query: 121 SFPYGEDSFKFNKKRPKEEGESSLTKMATEGKDMSTEEVRIQGEKDGIKDKLDLNYGHEE 180
           SFPYGEDSFKFNKKRPKEEGESSLTKMA      STEEVRIQGEKDGIKDKLDLNYGHEE
Sbjct: 61  SFPYGEDSFKFNKKRPKEEGESSLTKMA------STEEVRIQGEKDGIKDKLDLNYGHEE 120

Query: 181 DLLEFGSHGNSSIYEQCCSDSTQNLLLPTDSKHDF-VLSSGRWSIDPEAESKIITPTIDQ 240
           DLLEFGSHGNSSIYEQCCSDSTQNLLLPTDS HDF VLSSGRWSIDPEAESKI++P IDQ
Sbjct: 121 DLLEFGSHGNSSIYEQCCSDSTQNLLLPTDSNHDFFVLSSGRWSIDPEAESKIMSPAIDQ 180

Query: 241 EFEQYFSGILPSLDP 254
           EFEQYFSG+LPSLDP
Sbjct: 181 EFEQYFSGVLPSLDP 189

[Close]

BLAST of Csor.00g200200 vs. ExPASy TrEMBL
Match: A0A6J1GGJ6 (protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like OS=Cucurbita moschata OX=3662 GN=LOC111453741 PE=4 SV=1)

HSP 1 Score: 384 bits (987), Expect = 7.56e-134
Identity = 188/194 (96.91%), Postives = 188/194 (96.91%), Query Frame = 0


Query: 61  MDQKNHTRHHPSHGGTHSFSGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI 120
           MDQKNH RHHPSHGGTHSFS FQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI
Sbjct: 1   MDQKNHPRHHPSHGGTHSFSDFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI 60

Query: 121 SFPYGEDSFKFNKKRPKEEGESSLTKMATEGKDMSTEEVRIQGEKDGIKDKLDLNYGHEE 180
           SFPYGEDSFKFNKKRPKE GESSLTKMATEGKDMSTEEVRIQGEKDGIKDKLDLNYGHEE
Sbjct: 61  SFPYGEDSFKFNKKRPKE-GESSLTKMATEGKDMSTEEVRIQGEKDGIKDKLDLNYGHEE 120

Query: 181 DLLEFGSHGNSSIYEQCCSDSTQNLLLPTDSKHDFVLSSGRWSIDPEAESKIITPTIDQE 240
           DLLEFGSHGNSSIYE  CSDSTQNLLLPTDS HDFVLSSGRWSIDPEAESKIITPTIDQE
Sbjct: 121 DLLEFGSHGNSSIYEHYCSDSTQNLLLPTDSNHDFVLSSGRWSIDPEAESKIITPTIDQE 180

Query: 241 FEQYFSGILPSLDP 254
           FEQYFSGILPSLDP
Sbjct: 181 FEQYFSGILPSLDP 193

[Close]

BLAST of Csor.00g200200 vs. ExPASy TrEMBL
Match: A0A6J1IMA5 (protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like OS=Cucurbita maxima OX=3661 GN=LOC111478324 PE=4 SV=1)

HSP 1 Score: 372 bits (955), Expect = 4.92e-129
Identity = 182/195 (93.33%), Postives = 185/195 (94.87%), Query Frame = 0


Query: 61  MDQKNHTRHHPSHGGTHSFSGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI 120
           MDQKNH RHHPSHGGTHSFSGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI
Sbjct: 1   MDQKNHPRHHPSHGGTHSFSGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI 60

Query: 121 SFPYGEDSFKFNKKRPKEEGESSLTKMATEGKDMSTEEVRIQGEKDGIKDKLDLNYGHEE 180
           SFPYGEDSFKFNKKRPKEEGESSLTKMA      STEEVRIQGEKDGIKDKLDLNYGHEE
Sbjct: 61  SFPYGEDSFKFNKKRPKEEGESSLTKMA------STEEVRIQGEKDGIKDKLDLNYGHEE 120

Query: 181 DLLEFGSHGNSSIYEQCCSDSTQNLLLPTDSKHDF-VLSSGRWSIDPEAESKIITPTIDQ 240
           DLLEFGSHGNSSIYEQCCSDSTQNLLLPTDS HDF VLSSGRWSIDPEAESKI++P IDQ
Sbjct: 121 DLLEFGSHGNSSIYEQCCSDSTQNLLLPTDSNHDFFVLSSGRWSIDPEAESKIMSPAIDQ 180

Query: 241 EFEQYFSGILPSLDP 254
           EFEQYFSG+LPSLDP
Sbjct: 181 EFEQYFSGVLPSLDP 189

[Close]

BLAST of Csor.00g200200 vs. ExPASy TrEMBL
Match: A0A1S3BJU4 (uncharacterized protein LOC103490381 OS=Cucumis melo OX=3656 GN=LOC103490381 PE=4 SV=1)

HSP 1 Score: 245 bits (626), Expect = 8.33e-79
Identity = 132/209 (63.16%), Postives = 153/209 (73.21%), Query Frame = 0


Query: 61  MDQKNHTRHHPSHGGTHS---------------FSGFQPWDTESFDVKKKRKLLFEQLSL 120
           MDQ N   HHPS   T                 F GFQ W+TE+ DVKKKR+LL +QLSL
Sbjct: 1   MDQNNQ-HHHPSQFDTDRIINSPTSLDFETSSRFHGFQSWNTEAIDVKKKRRLLIDQLSL 60

Query: 121 PTPKLPCWGPSSSSISFPYGEDSFKFNKKRPKEEGESSLTKMATEGKDMSTEEVRIQGEK 180
           PT KLPCWG  S SIS P+GED+FKFNKK PKE   S+LTK+  +GK+MS E+VR+QGEK
Sbjct: 61  PTSKLPCWG--SRSISIPHGEDNFKFNKK-PKEGEGSTLTKITIKGKEMSEEQVRMQGEK 120

Query: 181 DGIKDKLDLNYGHEEDLLEFGSHGNSSIYEQCCSDSTQNLLLPTDSKHDFVLSSGRWSID 240
           D    KL  +YGHEEDLLEFG+ G+S IYE+CCS S Q+LLLPTDSK +FVLSSGRWS+D
Sbjct: 121 D----KLQKSYGHEEDLLEFGTLGHSCIYEECCSGSAQSLLLPTDSKQNFVLSSGRWSVD 180

Query: 241 PEAESKIITPTIDQEFEQYFSGILPSLDP 254
            E ESK + PTIDQEFEQYFS +LPSLDP
Sbjct: 181 SETESKTVKPTIDQEFEQYFSVLLPSLDP 201

[Close]

BLAST of Csor.00g200200 vs. ExPASy TrEMBL
Match: A0A0A0KZL8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G296180 PE=4 SV=1)

HSP 1 Score: 219 bits (559), Expect = 1.96e-68
Identity = 128/223 (57.40%), Postives = 148/223 (66.37%), Query Frame = 0


Query: 61  MDQKNHTRHHPSHGGTHSF---------------SGFQPWDTESFDVKKKRKLLFEQLSL 120
           MDQ N   HHPSH  T                   G Q W+TE+ DVK KR+LL +QLSL
Sbjct: 1   MDQNNR-HHHPSHFDTDRIINRPTSVDFETPSRLHGCQSWNTEAVDVKNKRRLLIDQLSL 60

Query: 121 PTPKLPCWGPSSSSISFPYGEDSFKFN---KKRPKEEGE----------SSLTKMATE-G 180
           PT KLP WGP S  IS P+GED+FKFN   ++  +EEGE          S+LTK+A +  
Sbjct: 61  PTSKLPRWGPRS--ISIPHGEDNFKFNDQPQEEEQEEGEGEGGEGEGEESTLTKIAIDKS 120

Query: 181 KDMSTEEVRIQGEKDGIKDKLDLNYGHEEDLLEFGSHGNSSIYEQCCSDSTQNLLLPTDS 240
           K+MS E+VR+QG KD    KL  +YGHEEDLLEFGS     IYE+CCS S QNLLLPTDS
Sbjct: 121 KEMSEEQVRMQGGKD----KLQKSYGHEEDLLEFGSREYGCIYEECCSGSAQNLLLPTDS 180

Query: 241 KHDFVLSSGRWSIDPEAESKIITPTIDQEFEQYFSGILPSLDP 254
           K +FVLSSGRWS+D E ESK I PTIDQEFEQYFS +LPSLDP
Sbjct: 181 KQNFVLSSGRWSVDTETESKPIKPTIDQEFEQYFSVLLPSLDP 216

[Close]

BLAST of Csor.00g200200 vs. ExPASy TrEMBL
Match: A0A6J1CPJ7 (uncharacterized protein LOC111013556 OS=Momordica charantia OX=3673 GN=LOC111013556 PE=4 SV=1)

HSP 1 Score: 175 bits (444), Expect = 1.08e-51
Identity = 108/195 (55.38%), Postives = 128/195 (65.64%), Query Frame = 0


Query: 61  MDQKNHTRHHPSHGGTHSFSGFQPWDTESFDVKKKRKLLFE--QLSLPTPKLPCWGPSSS 120
           M+Q++H   HPSH  T SF GFQPW+T  FDVKKKRKLL E  QLS PTPKLP WGP+ S
Sbjct: 1   MEQESH---HPSHSSTDSFPGFQPWNTGGFDVKKKRKLLIELEQLSFPTPKLPRWGPTPS 60

Query: 121 SISFPYGEDSFKFNKKRPK--EEGESSLTKMATEGKDMSTEEVRIQGEKDGIKDKLDLNY 180
            +SFPYG  +FKFN+   K  EE E +LTK A E K++S  E  ++         L ++Y
Sbjct: 61  -VSFPYG-GNFKFNQNPQKDVEEEEINLTKRAMEVKEISKLEALMES-------GLHISY 120

Query: 181 GHEEDLLEFGSHGNSSIYEQCCSDSTQNLLLPTDSKHDFVLSSGRWSIDP--EAESKIIT 240
           GH EDLLEFGS       E+C  DS          KHDFVLSSGRW++DP  EAESK + 
Sbjct: 121 GHGEDLLEFGSTD-----EECYRDS----------KHDFVLSSGRWNVDPPSEAESKTLK 168

Query: 241 PTIDQEFEQYFSGIL 249
           PTIDQEFEQYFS +L
Sbjct: 181 PTIDQEFEQYFSVLL 168

[Close]

BLAST of Csor.00g200200 vs. TAIR 10
Match: AT5G02200.1 (far-red-elongated hypocotyl1-like )

HSP 1 Score: 52.0 bits (123), Expect = 8.2e-07
Identity = 52/181 (28.73%), Postives = 81/181 (44.75%), Query Frame = 0


Query: 88  ESFDVKKKRKLLFEQLS-LPTPKLPCWGPSSSSIS-------FPYGEDSFKFNKKRPKEE 147
           ES D  KKRKL  E+   LP PK  C    +S ++         Y E S+     +  +E
Sbjct: 6   ESLDTSKKRKLHAEESDLLPLPKHFCSEHQASLVNSSCPSSVIDYAECSYAMENTKTSDE 65

Query: 148 GESS---------LTKMATEGKDMSTEEVRIQGEKDGIKDKLDLNYGHEEDLLEFGSHGN 207
             SS         + K +      S+         +    K+D  +  +ED  +F +H  
Sbjct: 66  ASSSASFTGPSLYMFKDSIYSTGSSSSGYAATSSIEQCFSKVD--HKTQEDTQDF-THME 125

Query: 208 SSIYE-QCCSDSTQNLLLPTDSKHDFVLSSGRWSIDPEAESKIIT-PTIDQEFEQYFSGI 250
              ++ +   +  Q +L P +S   ++LSS RWS+  +   +  T PTIDQEFEQYFS +
Sbjct: 126 FIYHDSEFAVEDLQEVLNPVES---YILSSARWSVSNQDSKEATTKPTIDQEFEQYFSTL 180

[Close]

BLAST of Csor.00g200200 vs. TAIR 10
Match: AT5G02200.2 (far-red-elongated hypocotyl1-like )

HSP 1 Score: 52.0 bits (123), Expect = 8.2e-07
Identity = 52/181 (28.73%), Postives = 81/181 (44.75%), Query Frame = 0


Query: 88  ESFDVKKKRKLLFEQLS-LPTPKLPCWGPSSSSIS-------FPYGEDSFKFNKKRPKEE 147
           ES D  KKRKL  E+   LP PK  C    +S ++         Y E S+     +  +E
Sbjct: 26  ESLDTSKKRKLHAEESDLLPLPKHFCSEHQASLVNSSCPSSVIDYAECSYAMENTKTSDE 85

Query: 148 GESS---------LTKMATEGKDMSTEEVRIQGEKDGIKDKLDLNYGHEEDLLEFGSHGN 207
             SS         + K +      S+         +    K+D  +  +ED  +F +H  
Sbjct: 86  ASSSASFTGPSLYMFKDSIYSTGSSSSGYAATSSIEQCFSKVD--HKTQEDTQDF-THME 145

Query: 208 SSIYE-QCCSDSTQNLLLPTDSKHDFVLSSGRWSIDPEAESKIIT-PTIDQEFEQYFSGI 250
              ++ +   +  Q +L P +S   ++LSS RWS+  +   +  T PTIDQEFEQYFS +
Sbjct: 146 FIYHDSEFAVEDLQEVLNPVES---YILSSARWSVSNQDSKEATTKPTIDQEFEQYFSTL 200

[Close]

BLAST of Csor.00g200200 vs. TAIR 10
Match: AT2G37678.1 (far-red elongated hypocotyl 1 )

HSP 1 Score: 42.0 bits (97), Expect = 8.5e-04
Identity = 49/175 (28.00%), Postives = 75/175 (42.86%), Query Frame = 0


Query: 88  ESFDVKKKRKLLFEQLS----LPTPKLPCWGPSSSSISFPYGEDSFKFNKKRPKEEGESS 147
           E  +V KKRK   +Q      LP  K  C+   + S       ++   N +   E   SS
Sbjct: 34  EEVEVSKKRKFQTDQSDELSLLPLSKHTCFANVACS-------ENTNGNSEIDTEYSMSS 93

Query: 148 LTKMATEGK-----DMSTEEVRIQGEKDGIKDKLDLNYGHEEDLLEFGSHG--NSSIYEQ 207
                T  +     +M  E     GE   I  +  L+Y +    LE  S     + +Y  
Sbjct: 94  YVNSTTSMECNNDIEMKEESSGSCGEDKMISFESHLDYIYGTQNLEDFSEKVIENILYLD 153

Query: 208 CCSDSTQNLLLPTDSKHDFVLSSGRWSIDPEAESKIIT--PTIDQEFEQYFSGIL 250
              +  ++    + +   FVLSSGRW+++ +  +   T  PTIDQEFEQYFS ++
Sbjct: 154 EQEEEEEDAKGCSSNAAKFVLSSGRWTVNQDDSTLHETKKPTIDQEFEQYFSTLM 201

The following BLAST results are available for this feature:

BLAST of Csor.00g200200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A8MR65	1.2e-05	28.73	Protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE OS=Arabidopsis thaliana OX=3702 GN=FH...	[more]

BLAST of Csor.00g200200 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6603645.1	7.40e-185	100.00	Protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE protein, partial [Cucurbita argyrospe...	[more]
KAG7033829.1	3.19e-140	99.48	hypothetical protein SDJN02_03554, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023544624.1	4.01e-136	97.42	protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like [Cucurbita pepo subsp. pepo]	[more]
XP_022950730.1	1.56e-133	96.91	protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like [Cucurbita moschata]	[more]
XP_022978296.1	1.02e-128	93.33	protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like [Cucurbita maxima]	[more]

BLAST of Csor.00g200200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GGJ6	7.56e-134	96.91	protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1IMA5	4.92e-129	93.33	protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A1S3BJU4	8.33e-79	63.16	uncharacterized protein LOC103490381 OS=Cucumis melo OX=3656 GN=LOC103490381 PE=...	[more]
A0A0A0KZL8	1.96e-68	57.40	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G296180 PE=4 SV=1	[more]
A0A6J1CPJ7	1.08e-51	55.38	uncharacterized protein LOC111013556 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]

BLAST of Csor.00g200200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02200.1	8.2e-07	28.73	far-red-elongated hypocotyl1-like	[more]
AT5G02200.2	8.2e-07	28.73	far-red-elongated hypocotyl1-like	[more]
AT2G37678.1	8.5e-04	28.00	far-red elongated hypocotyl 1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..153
None	No IPR available	PANTHER	PTHR37723:SF1	PROTEIN FAR-RED ELONGATED HYPOCOTYL 1	coord: 130..247 coord: 68..128
IPR037766	Protein FAR-RED ELONGATED HYPOCOTYL 1	PANTHER	PTHR37723	PROTEIN FAR-RED ELONGATED HYPOCOTYL 1	coord: 130..247 coord: 68..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g200200.m01	Csor.00g200200.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009639	response to red or far red light
cellular_component	GO:0005622	intracellular anatomical structure