Csor.00g200120 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGGCCTCATTCCATTCCTTTACAAAGCCATTGTCCACTACAGAAATGGCTATAACCAAGCCGATAGCCAACCGTCATGGCGCTGCGACGAGTCTCCCTCTGCTTCAGCTTCATATGTAAGACTTGCAGGTGATGAACAAGACAGTGCCTCTTCTTCTTCTTTTTCTAATGGCAGTGTTAGAATATCAGCTTCTGGGATTCAATCTCCTTTGCGTCGTTTGGTTCCCCGTCGAGTTGCTGCTTGA ATGGAAGGCCTCATTCCATTCCTTTACAAAGCCATTGTCCACTACAGAAATGGCTATAACCAAGCCGATAGCCAACCGTCATGGCGCTGCGACGAGTCTCCCTCTGCTTCAGCTTCATATGTAAGACTTGCAGGTGATGAACAAGACAGTGCCTCTTCTTCTTCTTTTTCTAATGGCAGTGTTAGAATATCAGCTTCTGGGATTCAATCTCCTTTGCGTCGTTTGGTTCCCCGTCGAGTTGCTGCTTGA ATGGAAGGCCTCATTCCATTCCTTTACAAAGCCATTGTCCACTACAGAAATGGCTATAACCAAGCCGATAGCCAACCGTCATGGCGCTGCGACGAGTCTCCCTCTGCTTCAGCTTCATATGTAAGACTTGCAGGTGATGAACAAGACAGTGCCTCTTCTTCTTCTTTTTCTAATGGCAGTGTTAGAATATCAGCTTCTGGGATTCAATCTCCTTTGCGTCGTTTGGTTCCCCGTCGAGTTGCTGCTTGA MEGLIPFLYKAIVHYRNGYNQADSQPSWRCDESPSASASYVRLAGDEQDSASSSSFSNGSVRISASGIQSPLRRLVPRRVAA Homology
BLAST of Csor.00g200120 vs. NCBI nr
Match: KAG6603637.1 (hypothetical protein SDJN03_04246, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 160 bits (405), Expect = 2.04e-49 Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0
BLAST of Csor.00g200120 vs. NCBI nr
Match: KAG7033819.1 (hypothetical protein SDJN02_03544, partial [Cucurbita argyrosperma subsp. argyrosperma] >KAG7033820.1 hypothetical protein SDJN02_03545, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 158 bits (400), Expect = 1.18e-48 Identity = 81/82 (98.78%), Postives = 81/82 (98.78%), Query Frame = 0
BLAST of Csor.00g200120 vs. NCBI nr
Match: KGN54276.1 (hypothetical protein Csa_018169 [Cucumis sativus]) HSP 1 Score: 67.8 bits (164), Expect = 2.32e-12 Identity = 54/112 (48.21%), Postives = 70/112 (62.50%), Query Frame = 0
BLAST of Csor.00g200120 vs. NCBI nr
Match: KAG6595338.1 (hypothetical protein SDJN03_11891, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 64.3 bits (155), Expect = 2.95e-11 Identity = 48/88 (54.55%), Postives = 55/88 (62.50%), Query Frame = 0
BLAST of Csor.00g200120 vs. NCBI nr
Match: KAG7017269.1 (hypothetical protein SDJN02_19132, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 63.9 bits (154), Expect = 4.29e-11 Identity = 48/93 (51.61%), Postives = 58/93 (62.37%), Query Frame = 0
BLAST of Csor.00g200120 vs. ExPASy TrEMBL
Match: A0A0A0L2A8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G296290 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.12e-12 Identity = 54/112 (48.21%), Postives = 70/112 (62.50%), Query Frame = 0
BLAST of Csor.00g200120 vs. ExPASy TrEMBL
Match: A0A0A0LD26 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733930 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 3.30e-10 Identity = 46/92 (50.00%), Postives = 55/92 (59.78%), Query Frame = 0
BLAST of Csor.00g200120 vs. ExPASy TrEMBL
Match: A0A5D3DNC7 (Legume-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001410 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 4.79e-10 Identity = 46/93 (49.46%), Postives = 55/93 (59.14%), Query Frame = 0
BLAST of Csor.00g200120 vs. ExPASy TrEMBL
Match: S5VRI4 (Legume-specific protein OS=Aeschynomene sensitiva OX=552036 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 7.13e-10 Identity = 47/97 (48.45%), Postives = 56/97 (57.73%), Query Frame = 0
BLAST of Csor.00g200120 vs. ExPASy TrEMBL
Match: S5VRI7 (Legume-specific protein OS=Aeschynomene pratensis OX=561494 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 1.01e-09 Identity = 47/97 (48.45%), Postives = 56/97 (57.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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