Csor.00g200120 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g200120
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionLegume-specific protein
LocationCsor_Chr03: 4912131 .. 4912379 (-)
RNA-Seq ExpressionCsor.00g200120
SyntenyCsor.00g200120
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGGCCTCATTCCATTCCTTTACAAAGCCATTGTCCACTACAGAAATGGCTATAACCAAGCCGATAGCCAACCGTCATGGCGCTGCGACGAGTCTCCCTCTGCTTCAGCTTCATATGTAAGACTTGCAGGTGATGAACAAGACAGTGCCTCTTCTTCTTCTTTTTCTAATGGCAGTGTTAGAATATCAGCTTCTGGGATTCAATCTCCTTTGCGTCGTTTGGTTCCCCGTCGAGTTGCTGCTTGA

mRNA sequence

ATGGAAGGCCTCATTCCATTCCTTTACAAAGCCATTGTCCACTACAGAAATGGCTATAACCAAGCCGATAGCCAACCGTCATGGCGCTGCGACGAGTCTCCCTCTGCTTCAGCTTCATATGTAAGACTTGCAGGTGATGAACAAGACAGTGCCTCTTCTTCTTCTTTTTCTAATGGCAGTGTTAGAATATCAGCTTCTGGGATTCAATCTCCTTTGCGTCGTTTGGTTCCCCGTCGAGTTGCTGCTTGA

Coding sequence (CDS)

ATGGAAGGCCTCATTCCATTCCTTTACAAAGCCATTGTCCACTACAGAAATGGCTATAACCAAGCCGATAGCCAACCGTCATGGCGCTGCGACGAGTCTCCCTCTGCTTCAGCTTCATATGTAAGACTTGCAGGTGATGAACAAGACAGTGCCTCTTCTTCTTCTTTTTCTAATGGCAGTGTTAGAATATCAGCTTCTGGGATTCAATCTCCTTTGCGTCGTTTGGTTCCCCGTCGAGTTGCTGCTTGA

Protein sequence

MEGLIPFLYKAIVHYRNGYNQADSQPSWRCDESPSASASYVRLAGDEQDSASSSSFSNGSVRISASGIQSPLRRLVPRRVAA
Homology
BLAST of Csor.00g200120 vs. NCBI nr
Match: KAG6603637.1 (hypothetical protein SDJN03_04246, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 160 bits (405), Expect = 2.04e-49
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0

Query: 1  MEGLIPFLYKAIVHYRNGYNQADSQPSWRCDESPSASASYVRLAGDEQDSASSSSFSNGS 60
          MEGLIPFLYKAIVHYRNGYNQADSQPSWRCDESPSASASYVRLAGDEQDSASSSSFSNGS
Sbjct: 1  MEGLIPFLYKAIVHYRNGYNQADSQPSWRCDESPSASASYVRLAGDEQDSASSSSFSNGS 60

Query: 61 VRISASGIQSPLRRLVPRRVAA 82
          VRISASGIQSPLRRLVPRRVAA
Sbjct: 61 VRISASGIQSPLRRLVPRRVAA 82

BLAST of Csor.00g200120 vs. NCBI nr
Match: KAG7033819.1 (hypothetical protein SDJN02_03544, partial [Cucurbita argyrosperma subsp. argyrosperma] >KAG7033820.1 hypothetical protein SDJN02_03545, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 158 bits (400), Expect = 1.18e-48
Identity = 81/82 (98.78%), Postives = 81/82 (98.78%), Query Frame = 0

Query: 1  MEGLIPFLYKAIVHYRNGYNQADSQPSWRCDESPSASASYVRLAGDEQDSASSSSFSNGS 60
          MEGLIPFLYKAIVHYRNGYNQADSQPSWRCDESPSASASYVRLAGDEQDSASSSSFSNGS
Sbjct: 1  MEGLIPFLYKAIVHYRNGYNQADSQPSWRCDESPSASASYVRLAGDEQDSASSSSFSNGS 60

Query: 61 VRISASGIQSPLRRLVPRRVAA 82
          VRISASGIQSPLRRLVP RVAA
Sbjct: 61 VRISASGIQSPLRRLVPHRVAA 82

BLAST of Csor.00g200120 vs. NCBI nr
Match: KGN54276.1 (hypothetical protein Csa_018169 [Cucumis sativus])

HSP 1 Score: 67.8 bits (164), Expect = 2.32e-12
Identity = 54/112 (48.21%), Postives = 70/112 (62.50%), Query Frame = 0

Query: 1   MEGLIPFLYKAIVHYRNGYNQADS----QPS--WRCD---ESPSASAS-----YVRLAGD 60
           MEGLIPFLYKAI+ Y+NG ++ ++    QPS  W CD   +SP +S+S     YVRLAGD
Sbjct: 1   MEGLIPFLYKAILQYKNGNSETNNNNMNQPSSYWWCDADHQSPPSSSSSSEALYVRLAGD 60

Query: 61  EQD--------------SASSSSFSNG-SVRISA-SGIQSPLRRLVPRRVAA 82
           +QD              S+SSS+F++  SV IS+ SGIQSPL  L+  RV A
Sbjct: 61  DQDYINTNTNNNLPFSSSSSSSTFNDTKSVIISSNSGIQSPLCHLLSNRVVA 112

BLAST of Csor.00g200120 vs. NCBI nr
Match: KAG6595338.1 (hypothetical protein SDJN03_11891, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 64.3 bits (155), Expect = 2.95e-11
Identity = 48/88 (54.55%), Postives = 55/88 (62.50%), Query Frame = 0

Query: 1  MEGLIPFLYKAIVHYRNGYNQADSQPSWRCDESPSASASYVRLAGDEQD----------- 60
          MEGLIPF+YKAIV +RNG N   SQ  W CD SPS SASY RL GD+ +           
Sbjct: 1  MEGLIPFVYKAIVEFRNGNN---SQTMWCCD-SPS-SASYQRLPGDDDELHNINGASSSS 60

Query: 61 ----SASSSSFSNGSVRISASGI-QSPL 72
              S+SSSS S+ SV IS SG+ QSPL
Sbjct: 61 SSSSSSSSSSSSSDSVLISGSGVDQSPL 83

BLAST of Csor.00g200120 vs. NCBI nr
Match: KAG7017269.1 (hypothetical protein SDJN02_19132, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 63.9 bits (154), Expect = 4.29e-11
Identity = 48/93 (51.61%), Postives = 58/93 (62.37%), Query Frame = 0

Query: 1  MEGLIPFLYKAIVHYRNGYNQADSQPSWRCDESPSASASYVRL-AGDE---QD------S 60
          MEG+IPF+YKAIV Y+N   Q  +  SW CD   S S SY+RL +GD    QD      S
Sbjct: 1  MEGIIPFVYKAIVQYKNE-KQVPAIRSWLCD---SPSTSYIRLPSGDSGRFQDGSYSAAS 60

Query: 61 ASSSSFSNGSVRISAS-GIQSPLRRLVPRRVAA 82
           SS S S+ + +I  S G+QSPLR L PRRVAA
Sbjct: 61 PSSKSASSTTTQILISTGVQSPLRHLTPRRVAA 89

BLAST of Csor.00g200120 vs. ExPASy TrEMBL
Match: A0A0A0L2A8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G296290 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.12e-12
Identity = 54/112 (48.21%), Postives = 70/112 (62.50%), Query Frame = 0

Query: 1   MEGLIPFLYKAIVHYRNGYNQADS----QPS--WRCD---ESPSASAS-----YVRLAGD 60
           MEGLIPFLYKAI+ Y+NG ++ ++    QPS  W CD   +SP +S+S     YVRLAGD
Sbjct: 1   MEGLIPFLYKAILQYKNGNSETNNNNMNQPSSYWWCDADHQSPPSSSSSSEALYVRLAGD 60

Query: 61  EQD--------------SASSSSFSNG-SVRISA-SGIQSPLRRLVPRRVAA 82
           +QD              S+SSS+F++  SV IS+ SGIQSPL  L+  RV A
Sbjct: 61  DQDYINTNTNNNLPFSSSSSSSTFNDTKSVIISSNSGIQSPLCHLLSNRVVA 112

BLAST of Csor.00g200120 vs. ExPASy TrEMBL
Match: A0A0A0LD26 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733930 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.30e-10
Identity = 46/92 (50.00%), Postives = 55/92 (59.78%), Query Frame = 0

Query: 1  MEGLIPFLYKAIVHYRNGYNQADSQPSWRCDESPSASASYVRL-AGDE-----QDSASSS 60
          MEGLIPF+YKAIV Y+N   Q  +  SW CD   S S SY+RL +GD      Q  AS S
Sbjct: 1  MEGLIPFVYKAIVQYKNE-KQVPAIRSWLCD---SPSTSYIRLPSGDSGRFQFQSDASPS 60

Query: 61 SFSNGSVRIS----ASGIQSPLRRLVPRRVAA 82
          S S  S   +    ++G+QSPLR L  RRVAA
Sbjct: 61 SKSPTSSTTTQILVSTGVQSPLRHLTTRRVAA 88

BLAST of Csor.00g200120 vs. ExPASy TrEMBL
Match: A0A5D3DNC7 (Legume-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001410 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 4.79e-10
Identity = 46/93 (49.46%), Postives = 55/93 (59.14%), Query Frame = 0

Query: 1  MEGLIPFLYKAIVHYRNGYNQADSQPSWRCDESPSASASYVRL-AGDE-----QDSASSS 60
          MEGLIPF+YKAIV Y+N   Q  +  SW CD   S S SY+RL +GD      Q  AS S
Sbjct: 1  MEGLIPFVYKAIVQYKNE-KQVPAIRSWLCD---SPSTSYIRLPSGDSGRFQFQSDASPS 60

Query: 61 SFSNGSVRIS-----ASGIQSPLRRLVPRRVAA 82
          S S  S   +     ++G+QSPLR L  RRVAA
Sbjct: 61 SKSPTSSTTATQILVSTGVQSPLRHLTTRRVAA 89

BLAST of Csor.00g200120 vs. ExPASy TrEMBL
Match: S5VRI4 (Legume-specific protein OS=Aeschynomene sensitiva OX=552036 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 7.13e-10
Identity = 47/97 (48.45%), Postives = 56/97 (57.73%), Query Frame = 0

Query: 1  MEGLIPFLYKAIVHYRNGYNQADSQPSWRCDESPSASASYVRLAGDE------------- 60
          MEGLIPF+YKAI+ Y+NG   A    +W C ESPS S  YVRL GD              
Sbjct: 1  MEGLIPFVYKAIMQYKNGNEGAIG--TWIC-ESPSYS--YVRLPGDSGRFQTPASCSAST 60

Query: 61 --QDSASSSSFSNGSVRISASGIQSPLRRLVPRRVAA 82
             +SASSSS S+  V +S SG+QSP + L  RRV A
Sbjct: 61 PSSNSASSSSSSSAQVLVS-SGVQSPHQGLTHRRVVA 91

BLAST of Csor.00g200120 vs. ExPASy TrEMBL
Match: S5VRI7 (Legume-specific protein OS=Aeschynomene pratensis OX=561494 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.01e-09
Identity = 47/97 (48.45%), Postives = 56/97 (57.73%), Query Frame = 0

Query: 1  MEGLIPFLYKAIVHYRNGYNQADSQPSWRCDESPSASASYVRLAGDE------------- 60
          MEGLIPF+YKAI+ Y+NG   A    +W C ESPS S  YVRL GD              
Sbjct: 1  MEGLIPFVYKAIMQYKNGNEGAIG--TWIC-ESPSYS--YVRLPGDSGRFQTPASCSAST 60

Query: 61 --QDSASSSSFSNGSVRISASGIQSPLRRLVPRRVAA 82
             +SASSSS S+  V +S SG+QSP + L  RRV A
Sbjct: 61 PSSNSASSSSSSSAQVLVS-SGVQSPHQGLTHRRVIA 91

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6603637.12.04e-49100.00hypothetical protein SDJN03_04246, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7033819.11.18e-4898.78hypothetical protein SDJN02_03544, partial [Cucurbita argyrosperma subsp. argyro... [more]
KGN54276.12.32e-1248.21hypothetical protein Csa_018169 [Cucumis sativus][more]
KAG6595338.12.95e-1154.55hypothetical protein SDJN03_11891, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7017269.14.29e-1151.61hypothetical protein SDJN02_19132, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
A0A0A0L2A81.12e-1248.21Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G296290 PE=4 SV=1[more]
A0A0A0LD263.30e-1050.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733930 PE=4 SV=1[more]
A0A5D3DNC74.79e-1049.46Legume-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
S5VRI47.13e-1048.45Legume-specific protein OS=Aeschynomene sensitiva OX=552036 PE=4 SV=1[more]
S5VRI71.01e-0948.45Legume-specific protein OS=Aeschynomene pratensis OX=561494 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..61
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..61
NoneNo IPR availablePANTHERPTHR34670:SF8EXPRESSED PROTEINcoord: 1..81
NoneNo IPR availablePANTHERPTHR34670EXPRESSED PROTEINcoord: 1..81

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g200120.m01Csor.00g200120.m01mRNA