Csor.00g198720 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCTTCCCGTTTCATCACCACCATCGCCGTGACGATGAAGAGGACGACGAACGTCGTTATCCTCCGCCGGGACATCGTCCTCCGTACTCCGATCCACCGCCGCCAGTGGTTCCTTCTGTCTACCACACTCATTACGACGGGGCGCCGCCCCCGCCAATGGTTTCCTCCGTCCACCACACTCACTACGACGAGGCACCGCCGCCGCCTCGGCCGTCTTACGCTGCCTTCAACTCCGATTTCCCTCCGGAACCGCCCGTTCCCGACTACGGCTACTCTTCTGGATCGCCGCCGGCGGTCGTGCACCATCACTCTCACCATTCACACTTCCCCTCGGTTGTTCACCACCACTCTCATAATTCCAATTCTTCCTTCTCCAACAAGCCGACTGTCAAGGTCTTCACCAAAGCAAACCCTAATTTCTCCCTTGCCATCCGCGACGGCAAAGTCATCCTCGTCCCTTCCGATCCCGACGATCCTGCTCAAGTATGATCGATTTAACCCTTGATCACTTCCAGTTTTCGCCTTAATTTGTAATTAGATCATTCGATTTTTGAAATTCTTCTTTACTCTTTGATTTTAATGGCGTTGATCAATCGTGAATGTTTCAGCACTGGTTCAAGGATGAGAAGTACAGTACGAGGATTAAGGATGAGGCAGGGTACCCCTCCTTCGCTCTGGTCAACAAGGCCACCGGTCAGGCGATGAAGCACTCCGTCGGAGATACTCATCCGGTAAGTTTTTCCTCTCATTCTATTGCCGCTGTTCGTCTTAATTTTTCTGGAAATTGAAATTCTCCGTGATGTTACTGAATGATGGATGAATTTACAGAACCCAGAAAATCATATACCCTATGGTGTAAACTTACCGTGCTTTTTGAAATATTCTATGGTATAAATTGATTAATTATTCCACTAGAAGTCAAGATCTTATATTATAAGTTCTAAGAGATTTTATCCTGAAAAAAGAATTATTATATTTAATCTAACAATGAAGTGAAACGTGTTCTTGATCAAAATAAAATAAATCTGGGTTGAAATTAATTAAATATAAGTGGATCATGTATACCTGAGAGGATAAAAGGAAGTACTGTTATCTTCTCTAAAGTTGAATGTGAGATATGTTAAAAGCATTGATTATAATTAAATTTACTGTAATTCATTAGCTTAAACTTTTGGATGATCGGTGATTTAACTTAGTATCAAAAGCAAGTGGTCTTGTGTTTGATCCTTTGTAATATCATATCCTTCCCAATAAATATTGGTTTCCACTTGGGTTTTCTATAAGTTGTCAGATGGGAATTGAGCATGGTGGTATTTTTTGTCTGTCCTAGAAGAAGTTTTTGAGTCAAAACTATAATAAATGTGGCTACAAGGATTTGAATCATCTGACTTTATGAGAATAAGTACATGGTAATTACTACTTAGCTTATGCTCGTGTTGGTTCCAATTGTAACGACCCGAAGCCCACCGCTAGCAGATATTAAGGGTGTGGAAACTTCCCCTGGCAGACACGTTTTAAAAACCTTGAGGGGAAGCCCAAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGAGCTTTGGGTCGTTACAAATGGTATCAAAGCGTCTCACCGAAGGATGCGAGACACTCGTCGGATTATGGGCTAGATTCCCTTCGTAGTAGAGGCGTTTTAAAATCCTTGAGGGGAAGCCCGAAAGGGAAAGTCCAAAGAGGACAATATTTGCTAGCGATGGGCTTTGGGTCGTTACAAATGGTATCAAAGCGTCTCACCGAAGGATGCGAGACACTAGTCGGAGTAGGGGCTAGATTCCCTTCGTAGTAGACGCCTTTTAAAATCCTTGAGGGGAAGCCCGAAAGGGAAAGTCCAAAGAGGACAATATTTGCTAGCGATGGGCTTTGGGTCGTTACAAATGGTATCAAAGCCCGTCATCGAAGGATGCGAGACACTAGTCAGAGTAGGGGCTAGATTCTCTTCGTAGTAGACATGTTTTAAAGTCCTAGCCCGAAAGGGAAAGCCCAAAGAGGACAACATTTGCTAGCGGTGGACTTGAATAGTTACACTCATTTGATAGTTGGTTGAGAGTATATTACTTTTGTAGGTGTATTGAGTCTTTGTTTTGGTTAGTTTGGCCTGTAATTGCTGTTTTTAATTTCTGCTTTTGTGGTGGTTGGGTTAAGATGATTATGTTGCCTGGGTTCGGCATTTTTTGTGATCAAGTTTCATTGGTTGCATCTTGGGGATTTAACATTTCTTGGTAAAGCTTTTGAATTTTGTTTCACGAAAGGTAACAAAATGGAATACCAAAATCCTAACACCCAACCAAACTGAGTGAAGCAAAGCAACTAAACTCGGTTGGATAGTGAGGATGACATCAGTTCTGTTTGGAATGACGTTAGAAAGTCACTCCAAAACGGCCCCTACAATCAAAACGGACTCACGAAACGAACCAACATGGTAAATACAATGCAGGTACAGCTGATACAATACAACCCTGACGTGGTGGACGAGTCGGTACTGTGGACACAGAGCCAGGACTTTGGGGAAGGGTTCAGATCCATAAGGATGGTGAATAACATTGCGTTGAATGTTGATGCTTTTCATGGGGACAAATACTCTGGTGGAGTTCACGACGGCACCAAAATTGTCCTTTGGAAATGGAAGGAAGGAGAGAACCAACTATGGAAGATCGTACCCTACTGTAAGTTCTTTTTCTTGCCCCTACTGCCCTTTTATGCCAAATAAAACTGTGCCTGCATTGATTTGAAATCATTCTCTCGTTTTCCTTGCTGTTGAATTTCTGGGTCTGAAGCCTAATCAAGAATTAGATTGTTCGTTCTACTTTAGTTTAAAATACAAATAGAGTTGGTTTAGTTCATAAATTCTTTTAGTCGAGTGATCTACTAGTCCCAAAATAAAAAATTCAAGGACCCGTTAGACACTTTTGAAATTCGTTCGAAGACTAAACTCGTACTGGATTCTTTTTTATTTCTTATCTAGGATGGATTTCATATATTTATCTTATTATATAGAAGAAAAATATGAGATCATTCATGTTGGTAACCTTACATTAGAAAGATTGGAAAACTTGCATGTTATTCTTCACATTGTTAATTGATTTTGAGATATTGAGATAGAACTCCAGATAGCATCTTAGTCCATGATGCCCAAACTAATATTTGGCCTCCAAAAAAATGGAATCCGACTCGAGAATGATAAAGCCATAAAAACACCATCTTGAGAGGCACGTCGAAGGTCGACATTGGAAACATGGGAAGATCTTACAATTTTTATGAACTACATGAACAATATATCATACGTGTTTAAAGGAGGTTTAAGCTAGCTTAGCTTTGTGAGTTGACTTCATTCTTGAGCTTTGATTTTATGAATTGAAGCTAATAATCTTTAATTAGTCCAGGGTATACATGAGATGGTCCTTGTAGCATTTTACAAGTGAATTGGGCGTTTTGTGGCTAGGTTCCATTTGCATCTATGATTGATACAAAATTGAATTATTGACTTTAGATATGGTAATCAGTGAGTTCGTCACCGAACGAACTATGCTTGGATTGACGTTAAGAACAACCCAAACTTGATTGATATTTCGTTTCGATATTGAAAATTTGAAACTTTGACTGATTACTTTTATCTTTTTGGGGTACAAACAGGAGGATGTGATCAGACAGATAAAAGGAGGGAGGGGGTATGCTATGCAGTGGAATGGGTAATGCGACGCTGA ATGTCCTTCCCGTTTCATCACCACCATCGCCGTGACGATGAAGAGGACGACGAACGTCGTTATCCTCCGCCGGGACATCGTCCTCCGTACTCCGATCCACCGCCGCCAGTGGTTCCTTCTGTCTACCACACTCATTACGACGGGGCGCCGCCCCCGCCAATGGTTTCCTCCGTCCACCACACTCACTACGACGAGGCACCGCCGCCGCCTCGGCCGTCTTACGCTGCCTTCAACTCCGATTTCCCTCCGGAACCGCCCGTTCCCGACTACGGCTACTCTTCTGGATCGCCGCCGGCGGTCGTGCACCATCACTCTCACCATTCACACTTCCCCTCGGTTGTTCACCACCACTCTCATAATTCCAATTCTTCCTTCTCCAACAAGCCGACTGTCAAGGTCTTCACCAAAGCAAACCCTAATTTCTCCCTTGCCATCCGCGACGGCAAAGTCATCCTCGTCCCTTCCGATCCCGACGATCCTGCTCAACACTGGTTCAAGGATGAGAAGTACAGTACGAGGATTAAGGATGAGGCAGGGTACCCCTCCTTCGCTCTGGTCAACAAGGCCACCGGTCAGGCGATGAAGCACTCCGTCGGAGATACTCATCCGGTACAGCTGATACAATACAACCCTGACGTGGTGGACGAGTCGGTACTGTGGACACAGAGCCAGGACTTTGGGGAAGGGTTCAGATCCATAAGGATGGTGAATAACATTGCGTTGAATGTTGATGCTTTTCATGGGGACAAATACTCTGGTGGAGTTCACGACGGCACCAAAATTGTCCTTTGGAAATGGAAGGAAGGAGAGAACCAACTATGGAAGATCGTACCCTACGGATGTGATCAGACAGATAAAAGGAGGGAGGGGGTATGCTATGCAGTGGAATGGGTAATGCGACGCTGA ATGTCCTTCCCGTTTCATCACCACCATCGCCGTGACGATGAAGAGGACGACGAACGTCGTTATCCTCCGCCGGGACATCGTCCTCCGTACTCCGATCCACCGCCGCCAGTGGTTCCTTCTGTCTACCACACTCATTACGACGGGGCGCCGCCCCCGCCAATGGTTTCCTCCGTCCACCACACTCACTACGACGAGGCACCGCCGCCGCCTCGGCCGTCTTACGCTGCCTTCAACTCCGATTTCCCTCCGGAACCGCCCGTTCCCGACTACGGCTACTCTTCTGGATCGCCGCCGGCGGTCGTGCACCATCACTCTCACCATTCACACTTCCCCTCGGTTGTTCACCACCACTCTCATAATTCCAATTCTTCCTTCTCCAACAAGCCGACTGTCAAGGTCTTCACCAAAGCAAACCCTAATTTCTCCCTTGCCATCCGCGACGGCAAAGTCATCCTCGTCCCTTCCGATCCCGACGATCCTGCTCAACACTGGTTCAAGGATGAGAAGTACAGTACGAGGATTAAGGATGAGGCAGGGTACCCCTCCTTCGCTCTGGTCAACAAGGCCACCGGTCAGGCGATGAAGCACTCCGTCGGAGATACTCATCCGGTACAGCTGATACAATACAACCCTGACGTGGTGGACGAGTCGGTACTGTGGACACAGAGCCAGGACTTTGGGGAAGGGTTCAGATCCATAAGGATGGTGAATAACATTGCGTTGAATGTTGATGCTTTTCATGGGGACAAATACTCTGGTGGAGTTCACGACGGCACCAAAATTGTCCTTTGGAAATGGAAGGAAGGAGAGAACCAACTATGGAAGATCGTACCCTACGGATGTGATCAGACAGATAAAAGGAGGGAGGGGGTATGCTATGCAGTGGAATGGGTAATGCGACGCTGA MSFPFHHHHRRDDEEDDERRYPPPGHRPPYSDPPPPVVPSVYHTHYDGAPPPPMVSSVHHTHYDEAPPPPRPSYAAFNSDFPPEPPVPDYGYSSGSPPAVVHHHSHHSHFPSVVHHHSHNSNSSFSNKPTVKVFTKANPNFSLAIRDGKVILVPSDPDDPAQHWFKDEKYSTRIKDEAGYPSFALVNKATGQAMKHSVGDTHPVQLIQYNPDVVDESVLWTQSQDFGEGFRSIRMVNNIALNVDAFHGDKYSGGVHDGTKIVLWKWKEGENQLWKIVPYGCDQTDKRREGVCYAVEWVMRR Homology
BLAST of Csor.00g198720 vs. ExPASy Swiss-Prot
Match: Q945P1 (Ricin B-like lectin EULS3 OS=Arabidopsis thaliana OX=3702 GN=EULS3 PE=1 SV=1) HSP 1 Score: 252.3 bits (643), Expect = 6.9e-66 Identity = 152/317 (47.95%), Postives = 188/317 (59.31%), Query Frame = 0
BLAST of Csor.00g198720 vs. ExPASy Swiss-Prot
Match: Q6Z4N4 (Ricin B-like lectin R40G3 OS=Oryza sativa subsp. japonica OX=39947 GN=R40G3 PE=2 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 2.2e-59 Identity = 110/189 (58.20%), Postives = 138/189 (73.02%), Query Frame = 0
BLAST of Csor.00g198720 vs. ExPASy Swiss-Prot
Match: Q10M12 (Ricin B-like lectin R40C1 OS=Oryza sativa subsp. japonica OX=39947 GN=R40C1 PE=1 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 4.2e-55 Identity = 98/178 (55.06%), Postives = 129/178 (72.47%), Query Frame = 0
BLAST of Csor.00g198720 vs. ExPASy Swiss-Prot
Match: Q6Z4N6 (Ricin B-like lectin R40G2 OS=Oryza sativa subsp. japonica OX=39947 GN=R40G2 PE=2 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 1.0e-53 Identity = 93/166 (56.02%), Postives = 123/166 (74.10%), Query Frame = 0
BLAST of Csor.00g198720 vs. NCBI nr
Match: KAG6603498.1 (Ricin B-like lectin EULS3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 626 bits (1614), Expect = 1.43e-226 Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0
BLAST of Csor.00g198720 vs. NCBI nr
Match: KAG7033678.1 (Ricin B-like lectin EULS3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 576 bits (1484), Expect = 4.15e-207 Identity = 278/279 (99.64%), Postives = 279/279 (100.00%), Query Frame = 0
BLAST of Csor.00g198720 vs. NCBI nr
Match: XP_022950338.1 (ricin B-like lectin R40G3 [Cucurbita moschata]) HSP 1 Score: 573 bits (1478), Expect = 3.41e-206 Identity = 277/279 (99.28%), Postives = 279/279 (100.00%), Query Frame = 0
BLAST of Csor.00g198720 vs. NCBI nr
Match: XP_023544941.1 (ricin B-like lectin R40G3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 566 bits (1459), Expect = 5.44e-203 Identity = 273/279 (97.85%), Postives = 278/279 (99.64%), Query Frame = 0
BLAST of Csor.00g198720 vs. NCBI nr
Match: XP_022978259.1 (ricin B-like lectin R40G3 [Cucurbita maxima]) HSP 1 Score: 563 bits (1452), Expect = 3.14e-202 Identity = 271/279 (97.13%), Postives = 275/279 (98.57%), Query Frame = 0
BLAST of Csor.00g198720 vs. ExPASy TrEMBL
Match: A0A6J1GEM1 (ricin B-like lectin R40G3 OS=Cucurbita moschata OX=3662 GN=LOC111453449 PE=4 SV=1) HSP 1 Score: 573 bits (1478), Expect = 1.65e-206 Identity = 277/279 (99.28%), Postives = 279/279 (100.00%), Query Frame = 0
BLAST of Csor.00g198720 vs. ExPASy TrEMBL
Match: A0A6J1ITL7 (ricin B-like lectin R40G3 OS=Cucurbita maxima OX=3661 GN=LOC111478294 PE=4 SV=1) HSP 1 Score: 563 bits (1452), Expect = 1.52e-202 Identity = 271/279 (97.13%), Postives = 275/279 (98.57%), Query Frame = 0
BLAST of Csor.00g198720 vs. ExPASy TrEMBL
Match: A0A1S3B4K8 (extensin OS=Cucumis melo OX=3656 GN=LOC103485969 PE=4 SV=1) HSP 1 Score: 440 bits (1132), Expect = 5.38e-154 Identity = 214/282 (75.89%), Postives = 239/282 (84.75%), Query Frame = 0
BLAST of Csor.00g198720 vs. ExPASy TrEMBL
Match: A0A0A0KYQ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G193240 PE=4 SV=1) HSP 1 Score: 435 bits (1119), Expect = 4.61e-152 Identity = 208/279 (74.55%), Postives = 236/279 (84.59%), Query Frame = 0
BLAST of Csor.00g198720 vs. ExPASy TrEMBL
Match: A0A6J1DST7 (ricin B-like lectin R40G3 OS=Momordica charantia OX=3673 GN=LOC111023166 PE=4 SV=1) HSP 1 Score: 400 bits (1029), Expect = 2.22e-138 Identity = 197/279 (70.61%), Postives = 231/279 (82.80%), Query Frame = 0
BLAST of Csor.00g198720 vs. TAIR 10
Match: AT2G39050.1 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 252.3 bits (643), Expect = 4.9e-67 Identity = 152/317 (47.95%), Postives = 188/317 (59.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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