Csor.00g198100 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g198100
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr03: 3361433 .. 3365034 (+)
RNA-Seq ExpressionCsor.00g198100
SyntenyCsor.00g198100
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGATGAGGCTGCCTTCTTTGGATTGCCTCTTGAGTATTAATGGCTATGTGGCTGAGCGCCCAACAAGAAAATGTTATCTTCCTGGGATATTTGTCTTCCCACGTTCCATCATAAAAAGAGCTTCTGTGAGTATATTTAGATTTTTTAAGCTCCTTGATCATGAATTTGAAAGAAAAACTAGTTATGAATTCGTGGGGCCATGTCCATCTACCTTATGAGGAGGAGTGGGAGATGTTGAGTAGCTTTTGTGGAAAGATGTTACATTAATTCTTCCTTCAGCAGAGTTATTATTGTCAATGACTTGATATAGAGTGTTATCCTCCTTTGTGTCATTTTTGTGTTCTCAAGGGAGAAAGTTACTGTATCCGCTCTCTTATAGATAGTGAGTTACTAAGCTTGACTTAGCAAAAGAAGTCATTAACCTAGAGCAATTTTAGGATAATTATTTAGTAGTTATTGATTTGAAAGTTTAGGAGATCGATTAGGAAGATTTAGTAGATATTGATTTGAAAGTTCAGGAGATGAGATTTAGTAGTTATTGATTTGAGGAGGAAGTATTAGGAGATCGATTGTGCAATCTCCACTAGAAATACTCATGAGATGCATGTTATTTTAACAACAAAAAAATAGAATTAATCAAAGCATAAGTGCTTAAAGGTTCCTCCATTCAAAAGCTCTTTCCCCTCAAATTGTTCTTCTGCTTCCGTTATTTATTTCGACATATTTCGATTGTGGGTTATTTCCAACATAGATTAGGTTGTTGCCTAGTATGGCTTGCGTTTTCTCAAGCTCAAGTAGATTAAGCCGTGTCTACATCAAGGAACTGACAGAATAGGCATGTTTTCTGGAGTTCGCTTTTGCCCTGAACGATTGAATTGACATAGAGGAACGAAGCAGCGAGAGGATGGAACTCAAATCCTAAGTAAAAAAAATTAAGAATAGGCTTTGGGTATCTTTTAAACATCAAAAGTGCATTTGAAATGATCTTTTGTAGTCTGTGATTTTCCATAGGAAAAGAAAACCAGAAAAGGAATCAACTTGTGTAAAATAGTTGTTTTCTTCCACTGTTTTTTTGTTTGTAGCAGCTAGATCGATTTCTTTGCAGAACAATAGATTTAAGGTATCATATAATTGGTTTCAAATATAGCATTATTTGTCTTTGCAACATCAGTTCACATTGTCTGTGAAACCTTGCATCACACAACAGGAAAAAATTGTTGATAGTAATGACTTCCATGTACGAAACTTTTTGTCTTCCTTTATTGTGGTTTGTCATGGAATATGAGCAGGCGTGGATGTTCTTATCTTGTTATTTCAAAATGGTATAAACTTTCTCCACCTTTAGGGACATTCCTATATTTGCTTGTACAGATGAAAGAAGATATTTGCAAAGCCGGCTTATTTTCAGGTTGGTATACCCTCTTTTTCTGATTCTTCTGTTCTTTTTGGTTGTTGGGTCCCTTTTCTTGCTGCATACTGTTTTAGACCCTTTTACATTCTTTAATTCTTCTTAATGATATTCTGTTCGTTAAAAGAAAGTCTTTTGAAACGCAGTAACTTACAAGCAGAAGTTTTCTTCTAACTACATGTGTCATTATAACCGTGGTTATGTTCAGTCATTCCTGGTCTGTTTAGGCATGGTTGGTATTTGCTACTAGTTTTGTAACAGTTGTGTCATTATAGCCGTTGTTATGTTCAGTCATTCCCTGTCTGTTTAGGCATTGTTGGTATTTGCTACTAGTTTTATAACGGTCCAAGCCACCGCTAGCAGATATTGTCCTCTTCTAACTACATGTGCCACTATAACTGTTGCTATGTTCAATCATTCCCTGCCTGTCTAGGCATCATTGGTATTTGCTACTAGTTTTGTAACGATCCGAGCCCACCGCTAGCAAATATTGTCCTCTTCTAACTACATGTGCCATTATCATTCCCTGTCTGTTTAGGCATGGTTGGTATTTGCTACTAGTTTTGTAACAGTTGTGTCATTATAGCCGTTGTTATGTTCAGTCATTCCCTGTCTGTTTAGGCATTGTTGGTATTTGCTACTAGTTTTATAACGGTCCAAGCCACCGCTAGCAGATATTGTCCTCTTCTAACTACATGTGCCACTATAACTGTTGCTATGTTCAATCATTCCCTGCCTGTCTAGGCATCATTGGTATTTGCTACTAGTTTTGTAACAATCCGAGCCCACCGCTAGCAAATATTGTCCTCTTCTAACTACATGTGCCATTATCATTCCCTGTCTGTTTAGGCATGGTTGGTATTTGCTACTAGTTTTGTAACCGTCCAAGCCCACCACTAATAAATATTGCCTTCTTCTAACTGCATGTGTCATTATAATCATTGTTATGTTCAGTCATTCCTTGTCTATTTAGGCACGGTTGGTATTTGCTACTAGTTTTGTAATAGTCCAAACTCACCGCCAGTAAATATTGTCCTCTTTTAACTACATGTGCCATTATAACCGTTGTTATGTTCAGTCATTCCCGGTCTGTTTAGGCATTGTTGGTATTTGCTACTAGTTTTGTAACAGTTCAAGCCGCCCGCAGCAGTATTGTCCTCTTTGGGCTTCCCCATAAGATTTTAACACGCTATGCTAGGGAGAGGTTTTCAGACCTTTATAAAGAAGGTGTTTCTTTCCTTTCGACCAACGTGGAATCTTAAAACTGCTGTTATGTGTAAATTTATAAATAAATATTACAGCGGACGGAAAGTGGATAATCTCATTTGGGTAACTTCTTATTACTGCAGGACTCTTCTACTTCTTACCAATTCTCTGCATCAGGTTTGTTTCTTTTCTTCTTCTCATCTTTATAACTTTACTTAGCTGCGATTTTGTAAATGGAGTCGGTCTATCGCTAGTAGATATTGTCATAAGTTTCCTCTCAAGGTTTTTAAAACACGTCTGTTAGGGAGAGGTTTCCACACTCTTATAAAGAATGTTTCGTTCTCCTCCGATCGATGTGGAATCTCACACTCTTTTAGGTCACTCTAGGTCATAGCTGCCATTTTGTAAACGGAGTATACCAACTTTTTGCAACCGTCTAAGCCTACTGCTAGTAGATATTGTCTTGGGTTTCCTCTCAAGGTTTTTAAAACACGTTTGCTAAACAGAGGTTTTCACATTCTTATAAAGAATGTTTTGTTCTTCTCTCCAATCGATGTAGAATCTCACACTCTTTTAGTTCACTCTAGGTTATCGGAGTTAAGTACATTATGACGTGTGAAGTACCAAAAGTTGATTAGTTTTGGGTTAAAATTATATTTTCCATCCCAACATTTAGAAGCAACATATCAGATTGCTTTTATAGGCCATGTTACCCTATTCTTTTCTGATTAACAGCTAACATTTGTCTAGAAGGCATGTCAATAAGGAATCAAAATTTAAAGTTGAGAATTTATAGTATAAACTTCTCTTATGGATGACCATCAAAATTCATGAAAAAGATCTCTCATTTAGTTTATGCAGTATTACTTAATATGTTGTATAGGCTTTGTATTACTGTTTATGTCTAGGTGATTATAGGATAACGTTTCAGGTACGATGGGGGATAAATATCAATGTGGCAACATCGAAAAGTTTAACGTATAA

mRNA sequence

ATGAGGATGAGGCTGCCTTCTTTGGATTGCCTCTTGAGTATTAATGGCTATGTGGCTGAGCGCCCAACAAGAAAATGTTATCTTCCTGGGATATTTGTCTTCCCACGTTCCATCATAAAAAGAGCTTCTGACTCTTCTACTTCTTACCAATTCTCTGCATCAGGTACGATGGGGGATAAATATCAATGTGGCAACATCGAAAAGTTTAACGTATAA

Coding sequence (CDS)

ATGAGGATGAGGCTGCCTTCTTTGGATTGCCTCTTGAGTATTAATGGCTATGTGGCTGAGCGCCCAACAAGAAAATGTTATCTTCCTGGGATATTTGTCTTCCCACGTTCCATCATAAAAAGAGCTTCTGACTCTTCTACTTCTTACCAATTCTCTGCATCAGGTACGATGGGGGATAAATATCAATGTGGCAACATCGAAAAGTTTAACGTATAA

Protein sequence

MRMRLPSLDCLLSINGYVAERPTRKCYLPGIFVFPRSIIKRASDSSTSYQFSASGTMGDKYQCGNIEKFNV
Homology
[Close]
BLAST of Csor.00g198100 vs. NCBI nr
Match: KAG6603436.1 (hypothetical protein SDJN03_04045, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 150 bits (380), Expect = 6.10e-46
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0 

Query: 1  MRMRLPSLDCLLSINGYVAERPTRKCYLPGIFVFPRSIIKRASDSSTSYQFSASGTMGDK 60
          MRMRLPSLDCLLSINGYVAERPTRKCYLPGIFVFPRSIIKRASDSSTSYQFSASGTMGDK
Sbjct: 1  MRMRLPSLDCLLSINGYVAERPTRKCYLPGIFVFPRSIIKRASDSSTSYQFSASGTMGDK 60

Query: 61 YQCGNIEKFNV 71
          YQCGNIEKFNV
Sbjct: 61 YQCGNIEKFNV 71

The following BLAST results are available for this feature:
BLAST of Csor.00g198100 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g198100 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6603436.16.10e-46100.00hypothetical protein SDJN03_04045, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g198100 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g198100 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g198100.m01Csor.00g198100.m01mRNA