Csor.00g198030 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g198030
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Epidermal patterning factor-like protein
Location	Csor_Chr01: 212672 .. 213155 (+)
RNA-Seq Expression	Csor.00g198030
Synteny	Csor.00g198030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCATTCTGCATTTAGCTTGTTGGGTGTCTGCTAAAACCACCGCTCTTGCTCCAAATCATCCTCTCCTTCCTCATAAACAACAACGTCCGTTGCCAGCTCTTGTCTCGGCCTCTTCTAATTCAAAACAGGTCAACCTTCGATTTGATTATATGTCCGTGAAATAAGTTTAGATTTCTTATTATTAGTCCCGTGTTCGATTCACGGCTGGTGTCGATGTTGAACTCATTGTTCTGTGTGTTTTTGAAGGGTGTTGGAGGCGTAAATGAAGAAGAAATGTTGTATAGAGGGATGAGACGAATGGGTTCAGGGCGGCCGAGGTGTGAGCACAAATGCTATGGATGCAGTCCATGTGAAGCCATTGAAGTGCCTACCAACAACAACAACAACAACAAGAGGCGCACCCAGGTGGGGGTCCAATACACCAACTATGAGCCCGAGGGATGGAAATGCAAGTGTGGCCATTCCTTTTACACCCCTTGA

mRNA sequence

ATGTTCATTCTGCATTTAGCTTGTTGGGTGTCTGCTAAAACCACCGCTCTTGCTCCAAATCATCCTCTCCTTCCTCATAAACAACAACGTCCGTTGCCAGCTCTTGTCTCGGCCTCTTCTAATTCAAAACAGGGTGTTGGAGGCGTAAATGAAGAAGAAATGTTGTATAGAGGGATGAGACGAATGGGTTCAGGGCGGCCGAGGTGTGAGCACAAATGCTATGGATGCAGTCCATGTGAAGCCATTGAAGTGCCTACCAACAACAACAACAACAACAAGAGGCGCACCCAGGTGGGGGTCCAATACACCAACTATGAGCCCGAGGGATGGAAATGCAAGTGTGGCCATTCCTTTTACACCCCTTGA

Coding sequence (CDS)

ATGTTCATTCTGCATTTAGCTTGTTGGGTGTCTGCTAAAACCACCGCTCTTGCTCCAAATCATCCTCTCCTTCCTCATAAACAACAACGTCCGTTGCCAGCTCTTGTCTCGGCCTCTTCTAATTCAAAACAGGGTGTTGGAGGCGTAAATGAAGAAGAAATGTTGTATAGAGGGATGAGACGAATGGGTTCAGGGCGGCCGAGGTGTGAGCACAAATGCTATGGATGCAGTCCATGTGAAGCCATTGAAGTGCCTACCAACAACAACAACAACAACAAGAGGCGCACCCAGGTGGGGGTCCAATACACCAACTATGAGCCCGAGGGATGGAAATGCAAGTGTGGCCATTCCTTTTACACCCCTTGA

Protein sequence

MFILHLACWVSAKTTALAPNHPLLPHKQQRPLPALVSASSNSKQGVGGVNEEEMLYRGMRRMGSGRPRCEHKCYGCSPCEAIEVPTNNNNNNKRRTQVGVQYTNYEPEGWKCKCGHSFYTP

Homology

[Close]

BLAST of Csor.00g198030 vs. ExPASy Swiss-Prot
Match: C4B8C4 (EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=EPFL3 PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 5.2e-12
Identity = 34/79 (43.04%), Postives = 48/79 (60.76%), Query Frame = 0


Query: 37  SASSNSKQGVGGVNE-EEMLYRGMRRMGSGRPRCEHKCYGCSPCEAIEVPTNNNNNNKRR 96
           +A  NS++ +   NE +E + +  RR+GS  P CE KCYGC PCEAI+ PT ++      
Sbjct: 31  AAEENSRRRILNPNENKEEIVKRRRRIGSKPPSCEKKCYGCEPCEAIQFPTISS-----I 90

Query: 97  TQVGVQYTNYEPEGWKCKC 115
             +   Y NY+PEGW+C C
Sbjct: 91  PHLSPHYANYQPEGWRCHC 104

[Close]

BLAST of Csor.00g198030 vs. ExPASy Swiss-Prot
Match: Q9LFT5 (EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EPFL1 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.6e-08
Identity = 31/88 (35.23%), Postives = 41/88 (46.59%), Query Frame = 0


Query: 49  VNEEEMLYRGMRRMGSGRPRCEHKCYGCSPCEAIEVPTNNNNNNKRR------------- 108
           ++ +  L     R+GS  P C ++C  C PC AI+VPT    +   R             
Sbjct: 35  ISPQVALIEDKARLGSTPPSCHNRCNNCHPCMAIQVPTLPTRSRFTRVNPFSGGFVRPPS 94

Query: 109 --TQVGVQYTNYEPEGWKCKCGHSFYTP 122
             T V  QY+NY+P GWKC C   FY P
Sbjct: 95  SLTTVLDQYSNYKPMGWKCHCNGHFYNP 122

[Close]

BLAST of Csor.00g198030 vs. ExPASy Swiss-Prot
Match: Q1PEY6 (EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EPFL6 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.5e-08
Identity = 29/77 (37.66%), Postives = 39/77 (50.65%), Query Frame = 0


Query: 46  VGGVNEEEMLYRGMRRMGSGRPRCEHKCYGCSPCEAIEVPTNNNNNNKRRTQVGVQYT-N 105
           +G  ++E  L R +R +GS  PRC  KC  C+PC+ + VP             G   T  
Sbjct: 90  IGDRSKEAELRRILRGLGSSPPRCSSKCGRCTPCKPVHVP----------VPPGTPVTAE 149

Query: 106 YEPEGWKCKCGHSFYTP 122
           Y PE W+CKCG+  Y P
Sbjct: 150 YYPEAWRCKCGNKLYMP 156

[Close]

BLAST of Csor.00g198030 vs. ExPASy Swiss-Prot
Match: Q2V3I3 (EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EPFL4 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 8.0e-05
Identity = 22/60 (36.67%), Postives = 28/60 (46.67%), Query Frame = 0


Query: 63  GSGRPRCEHKCYGCSPCEAIEVPTNNNNNNKRRTQVGVQY-TNYEPEGWKCKCGHSFYTP 122
           GS  P C  KC  C PC+ + VP           Q G+     Y PE W+CKCG+  + P
Sbjct: 60  GSSPPTCRSKCGKCQPCKPVHVP----------IQPGLSMPLEYYPEAWRCKCGNKLFMP 109

[Close]

BLAST of Csor.00g198030 vs. ExPASy Swiss-Prot
Match: Q9LUH9 (EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EPFL5 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 8.0e-05
Identity = 23/60 (38.33%), Postives = 29/60 (48.33%), Query Frame = 0


Query: 63  GSGRPRCEHKCYGCSPCEAIEVPTNNNNNNKRRTQVG-VQYTNYEPEGWKCKCGHSFYTP 122
           GS  P C  KC  C PC+A+ VP           Q G +    Y PE W+CKCG+  + P
Sbjct: 58  GSVPPMCRLKCGKCEPCKAVHVP----------IQPGLIMPLEYYPEAWRCKCGNKLFMP 107

[Close]

BLAST of Csor.00g198030 vs. NCBI nr
Match: KAG6606705.1 (EPIDERMAL PATTERNING FACTOR-like protein 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 263 bits (671), Expect = 9.15e-89
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 1   MFILHLACWVSAKTTALAPNHPLLPHKQQRPLPALVSASSNSKQGVGGVNEEEMLYRGMR 60
           MFILHLACWVSAKTTALAPNHPLLPHKQQRPLPALVSASSNSKQGVGGVNEEEMLYRGMR
Sbjct: 1   MFILHLACWVSAKTTALAPNHPLLPHKQQRPLPALVSASSNSKQGVGGVNEEEMLYRGMR 60

Query: 61  RMGSGRPRCEHKCYGCSPCEAIEVPTNNNNNNKRRTQVGVQYTNYEPEGWKCKCGHSFYT 120
           RMGSGRPRCEHKCYGCSPCEAIEVPTNNNNNNKRRTQVGVQYTNYEPEGWKCKCGHSFYT
Sbjct: 61  RMGSGRPRCEHKCYGCSPCEAIEVPTNNNNNNKRRTQVGVQYTNYEPEGWKCKCGHSFYT 120

[Close]

BLAST of Csor.00g198030 vs. NCBI nr
Match: KAG7036422.1 (EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 256 bits (654), Expect = 4.54e-86
Identity = 120/121 (99.17%), Postives = 120/121 (99.17%), Query Frame = 0


Query: 1   MFILHLACWVSAKTTALAPNHPLLPHKQQRPLPALVSASSNSKQGVGGVNEEEMLYRGMR 60
           MFILHLACWVSAKTTALAPNHPLLPHKQQRPLPALVSASSNSKQGVGGVNEEEMLYRGMR
Sbjct: 9   MFILHLACWVSAKTTALAPNHPLLPHKQQRPLPALVSASSNSKQGVGGVNEEEMLYRGMR 68

Query: 61  RMGSGRPRCEHKCYGCSPCEAIEVPTNNNNNNKRRTQVGVQYTNYEPEGWKCKCGHSFYT 120
           RMGSGRPRCEHKCYGCSPCEAIEVPTNNNNN KRRTQVGVQYTNYEPEGWKCKCGHSFYT
Sbjct: 69  RMGSGRPRCEHKCYGCSPCEAIEVPTNNNNN-KRRTQVGVQYTNYEPEGWKCKCGHSFYT 128

[Close]

BLAST of Csor.00g198030 vs. NCBI nr
Match: XP_022997834.1 (EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucurbita maxima])

HSP 1 Score: 249 bits (635), Expect = 4.10e-83
Identity = 118/124 (95.16%), Postives = 118/124 (95.16%), Query Frame = 0


Query: 1   MFILHLACWVSAKTTALAPNHPLLPHKQQRPLPALVSASSNSKQGVGGVNEEEMLYRGMR 60
           MFILHLACWVSAKTTALAPNHPLLPHKQQR LPALVSASSNSKQGVGGVNEEEMLYRGMR
Sbjct: 9   MFILHLACWVSAKTTALAPNHPLLPHKQQRLLPALVSASSNSKQGVGGVNEEEMLYRGMR 68

Query: 61  RMGSGRPRCEHKCYGCSPCEAIEVPTNNNN---NNKRRTQVGVQYTNYEPEGWKCKCGHS 120
            MGSGRPRCEHKCYGCSPCEAIEVPTNNNN   NNKRRT VGVQYTNYEPEGWKCKCGHS
Sbjct: 69  GMGSGRPRCEHKCYGCSPCEAIEVPTNNNNSKNNNKRRTHVGVQYTNYEPEGWKCKCGHS 128

[Close]

BLAST of Csor.00g198030 vs. NCBI nr
Match: XP_023523688.1 (EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 248 bits (632), Expect = 1.10e-82
Identity = 116/122 (95.08%), Postives = 117/122 (95.90%), Query Frame = 0


Query: 1   MFILHLACWVSAKTTALAPNHPLLPHKQQRPLPALVSASSNSKQGVGGVNEEEMLYRGMR 60
           MFILHLACWV AKTTA APNHPLLPHKQQR LPALVSA+SNSKQGVGGVNEEEMLYRGMR
Sbjct: 9   MFILHLACWVPAKTTAFAPNHPLLPHKQQRLLPALVSAASNSKQGVGGVNEEEMLYRGMR 68

Query: 61  RMGSGRPRCEHKCYGCSPCEAIEVPTNNNNNNK-RRTQVGVQYTNYEPEGWKCKCGHSFY 120
           RMGSGRPRCEHKCYGCSPCEAIEVPTNNNNNNK RRT VGVQYTNYEPEGWKCKCGHSFY
Sbjct: 69  RMGSGRPRCEHKCYGCSPCEAIEVPTNNNNNNKKRRTHVGVQYTNYEPEGWKCKCGHSFY 128

[Close]

BLAST of Csor.00g198030 vs. NCBI nr
Match: XP_022948940.1 (EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucurbita moschata])

HSP 1 Score: 243 bits (620), Expect = 7.21e-81
Identity = 111/121 (91.74%), Postives = 113/121 (93.39%), Query Frame = 0


Query: 1   MFILHLACWVSAKTTALAPNHPLLPHKQQRPLPALVSASSNSKQGVGGVNEEEMLYRGMR 60
           M +LHLACWVSAKTTA APNHPLLPHKQQR LPAL SASSNSKQGVGGVNEEEM+YRG R
Sbjct: 9   MLVLHLACWVSAKTTAFAPNHPLLPHKQQRLLPALASASSNSKQGVGGVNEEEMMYRGTR 68

Query: 61  RMGSGRPRCEHKCYGCSPCEAIEVPTNNNNNNKRRTQVGVQYTNYEPEGWKCKCGHSFYT 120
           RMGSGRPRCEHKCYGCSPCEAIEVPTNNN   KRRTQVGVQYTNYEPEGWKCKCGHSFYT
Sbjct: 69  RMGSGRPRCEHKCYGCSPCEAIEVPTNNNKKKKRRTQVGVQYTNYEPEGWKCKCGHSFYT 128

[Close]

BLAST of Csor.00g198030 vs. ExPASy TrEMBL
Match: A0A6J1KCN6 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111492675 PE=3 SV=1)

HSP 1 Score: 249 bits (635), Expect = 1.99e-83
Identity = 118/124 (95.16%), Postives = 118/124 (95.16%), Query Frame = 0


Query: 1   MFILHLACWVSAKTTALAPNHPLLPHKQQRPLPALVSASSNSKQGVGGVNEEEMLYRGMR 60
           MFILHLACWVSAKTTALAPNHPLLPHKQQR LPALVSASSNSKQGVGGVNEEEMLYRGMR
Sbjct: 9   MFILHLACWVSAKTTALAPNHPLLPHKQQRLLPALVSASSNSKQGVGGVNEEEMLYRGMR 68

Query: 61  RMGSGRPRCEHKCYGCSPCEAIEVPTNNNN---NNKRRTQVGVQYTNYEPEGWKCKCGHS 120
            MGSGRPRCEHKCYGCSPCEAIEVPTNNNN   NNKRRT VGVQYTNYEPEGWKCKCGHS
Sbjct: 69  GMGSGRPRCEHKCYGCSPCEAIEVPTNNNNSKNNNKRRTHVGVQYTNYEPEGWKCKCGHS 128

[Close]

BLAST of Csor.00g198030 vs. ExPASy TrEMBL
Match: A0A6J1GBB4 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111452440 PE=3 SV=1)

HSP 1 Score: 243 bits (620), Expect = 3.49e-81
Identity = 111/121 (91.74%), Postives = 113/121 (93.39%), Query Frame = 0


Query: 1   MFILHLACWVSAKTTALAPNHPLLPHKQQRPLPALVSASSNSKQGVGGVNEEEMLYRGMR 60
           M +LHLACWVSAKTTA APNHPLLPHKQQR LPAL SASSNSKQGVGGVNEEEM+YRG R
Sbjct: 9   MLVLHLACWVSAKTTAFAPNHPLLPHKQQRLLPALASASSNSKQGVGGVNEEEMMYRGTR 68

Query: 61  RMGSGRPRCEHKCYGCSPCEAIEVPTNNNNNNKRRTQVGVQYTNYEPEGWKCKCGHSFYT 120
           RMGSGRPRCEHKCYGCSPCEAIEVPTNNN   KRRTQVGVQYTNYEPEGWKCKCGHSFYT
Sbjct: 69  RMGSGRPRCEHKCYGCSPCEAIEVPTNNNKKKKRRTQVGVQYTNYEPEGWKCKCGHSFYT 128

[Close]

BLAST of Csor.00g198030 vs. ExPASy TrEMBL
Match: A0A1S3BIS6 (Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103490030 PE=3 SV=1)

HSP 1 Score: 150 bits (380), Expect = 8.53e-45
Identity = 75/121 (61.98%), Postives = 84/121 (69.42%), Query Frame = 0


Query: 1   MFILHLACWVSAKTTALAPNHPLLPHKQQRPLPALVSASSNSKQGVGGVNEEEMLYRGMR 60
           +FIL L CWVSA     APN  LLPHKQ      L+     SKQ V G+ EEE  YRGMR
Sbjct: 9   IFILQLVCWVSAAARTFAPNPALLPHKQ-----GLIE----SKQAVKGIKEEE-FYRGMR 68

Query: 61  RMGSGRPRCEHKCYGCSPCEAIEVPTNNNNNNKRRTQVGVQYTNYEPEGWKCKCGHSFYT 120
           ++GS  P CEHKCYGC PCEAI+VPT  N    RR+ +GVQYTNYEPEGWKCKCG SFY+
Sbjct: 69  KIGSSPPSCEHKCYGCIPCEAIQVPTTTN----RRSHIGVQYTNYEPEGWKCKCGPSFYS 115

[Close]

BLAST of Csor.00g198030 vs. ExPASy TrEMBL
Match: A0A5D3BVF6 (Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G00550 PE=3 SV=1)

HSP 1 Score: 150 bits (380), Expect = 8.53e-45
Identity = 75/121 (61.98%), Postives = 84/121 (69.42%), Query Frame = 0


Query: 1   MFILHLACWVSAKTTALAPNHPLLPHKQQRPLPALVSASSNSKQGVGGVNEEEMLYRGMR 60
           +FIL L CWVSA     APN  LLPHKQ      L+     SKQ V G+ EEE  YRGMR
Sbjct: 9   IFILQLVCWVSAAARTFAPNPALLPHKQ-----GLIE----SKQAVKGIKEEE-FYRGMR 68

Query: 61  RMGSGRPRCEHKCYGCSPCEAIEVPTNNNNNNKRRTQVGVQYTNYEPEGWKCKCGHSFYT 120
           ++GS  P CEHKCYGC PCEAI+VPT  N    RR+ +GVQYTNYEPEGWKCKCG SFY+
Sbjct: 69  KIGSSPPSCEHKCYGCIPCEAIQVPTTTN----RRSHIGVQYTNYEPEGWKCKCGPSFYS 115

[Close]

BLAST of Csor.00g198030 vs. ExPASy TrEMBL
Match: A0A6J1DIF6 (Epidermal patterning factor-like protein OS=Momordica charantia OX=3673 GN=LOC111020335 PE=3 SV=1)

HSP 1 Score: 141 bits (355), Expect = 5.79e-41
Identity = 70/117 (59.83%), Postives = 81/117 (69.23%), Query Frame = 0


Query: 7   ACWVSAKTTALAPNH--PLLPHKQQRPLPALVSASSNSKQGVGGVNEEEMLYRGMRRMGS 66
           +CWVSA T   APNH  PLLPHKQ      L+S S +SK+G   VN      RGMR +GS
Sbjct: 17  SCWVSAATRPFAPNHALPLLPHKQ-----GLISGSFDSKEGFEAVN------RGMREIGS 76

Query: 67  GRPRCEHKCYGCSPCEAIEVPTNNNNNNKRRTQVGVQYTNYEPEGWKCKCGHSFYTP 121
             P C+HKCYGCSPCEAI+VPT +     R + +GVQYTNYEPEGWKCKCG SFY+P
Sbjct: 77  SPPSCQHKCYGCSPCEAIQVPTTS-----RHSHLGVQYTNYEPEGWKCKCGPSFYSP 117

[Close]

BLAST of Csor.00g198030 vs. TAIR 10
Match: AT3G13898.1 (unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1). )

HSP 1 Score: 72.0 bits (175), Expect = 3.7e-13
Identity = 34/79 (43.04%), Postives = 48/79 (60.76%), Query Frame = 0


Query: 37  SASSNSKQGVGGVNE-EEMLYRGMRRMGSGRPRCEHKCYGCSPCEAIEVPTNNNNNNKRR 96
           +A  NS++ +   NE +E + +  RR+GS  P CE KCYGC PCEAI+ PT ++      
Sbjct: 31  AAEENSRRRILNPNENKEEIVKRRRRIGSKPPSCEKKCYGCEPCEAIQFPTISS-----I 90

Query: 97  TQVGVQYTNYEPEGWKCKC 115
             +   Y NY+PEGW+C C
Sbjct: 91  PHLSPHYANYQPEGWRCHC 104

[Close]

BLAST of Csor.00g198030 vs. TAIR 10
Match: AT5G10310.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13898.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 60.5 bits (145), Expect = 1.1e-09
Identity = 31/88 (35.23%), Postives = 41/88 (46.59%), Query Frame = 0


Query: 49  VNEEEMLYRGMRRMGSGRPRCEHKCYGCSPCEAIEVPTNNNNNNKRR------------- 108
           ++ +  L     R+GS  P C ++C  C PC AI+VPT    +   R             
Sbjct: 35  ISPQVALIEDKARLGSTPPSCHNRCNNCHPCMAIQVPTLPTRSRFTRVNPFSGGFVRPPS 94

Query: 109 --TQVGVQYTNYEPEGWKCKCGHSFYTP 122
             T V  QY+NY+P GWKC C   FY P
Sbjct: 95  SLTTVLDQYSNYKPMGWKCHCNGHFYNP 122

[Close]

BLAST of Csor.00g198030 vs. TAIR 10
Match: AT2G30370.1 (allergen-related )

HSP 1 Score: 59.3 bits (142), Expect = 2.5e-09
Identity = 29/77 (37.66%), Postives = 39/77 (50.65%), Query Frame = 0


Query: 46  VGGVNEEEMLYRGMRRMGSGRPRCEHKCYGCSPCEAIEVPTNNNNNNKRRTQVGVQYT-N 105
           +G  ++E  L R +R +GS  PRC  KC  C+PC+ + VP             G   T  
Sbjct: 164 IGDRSKEAELRRILRGLGSSPPRCSSKCGRCTPCKPVHVP----------VPPGTPVTAE 223

Query: 106 YEPEGWKCKCGHSFYTP 122
           Y PE W+CKCG+  Y P
Sbjct: 224 YYPEAWRCKCGNKLYMP 230

[Close]

BLAST of Csor.00g198030 vs. TAIR 10
Match: AT2G30370.2 (allergen-related )

HSP 1 Score: 59.3 bits (142), Expect = 2.5e-09
Identity = 29/77 (37.66%), Postives = 39/77 (50.65%), Query Frame = 0


Query: 46  VGGVNEEEMLYRGMRRMGSGRPRCEHKCYGCSPCEAIEVPTNNNNNNKRRTQVGVQYT-N 105
           +G  ++E  L R +R +GS  PRC  KC  C+PC+ + VP             G   T  
Sbjct: 90  IGDRSKEAELRRILRGLGSSPPRCSSKCGRCTPCKPVHVP----------VPPGTPVTAE 149

Query: 106 YEPEGWKCKCGHSFYTP 122
           Y PE W+CKCG+  Y P
Sbjct: 150 YYPEAWRCKCGNKLYMP 156

[Close]

BLAST of Csor.00g198030 vs. TAIR 10
Match: AT3G22820.1 (allergen-related )

HSP 1 Score: 48.1 bits (113), Expect = 5.7e-06
Identity = 23/60 (38.33%), Postives = 29/60 (48.33%), Query Frame = 0


Query: 63  GSGRPRCEHKCYGCSPCEAIEVPTNNNNNNKRRTQVG-VQYTNYEPEGWKCKCGHSFYTP 122
           GS  P C  KC  C PC+A+ VP           Q G +    Y PE W+CKCG+  + P
Sbjct: 58  GSVPPMCRLKCGKCEPCKAVHVP----------IQPGLIMPLEYYPEAWRCKCGNKLFMP 107

The following BLAST results are available for this feature:

BLAST of Csor.00g198030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
C4B8C4	5.2e-12	43.04	EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q9LFT5	1.6e-08	35.23	EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q1PEY6	3.5e-08	37.66	EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q2V3I3	8.0e-05	36.67	EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q9LUH9	8.0e-05	38.33	EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]

BLAST of Csor.00g198030 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6606705.1	9.15e-89	100.00	EPIDERMAL PATTERNING FACTOR-like protein 3, partial [Cucurbita argyrosperma subs...	[more]
KAG7036422.1	4.54e-86	99.17	EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022997834.1	4.10e-83	95.16	EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucurbita maxima]	[more]
XP_023523688.1	1.10e-82	95.08	EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucurbita pepo subsp. pepo]	[more]
XP_022948940.1	7.21e-81	91.74	EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucurbita moschata]	[more]

BLAST of Csor.00g198030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KCN6	1.99e-83	95.16	Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A6J1GBB4	3.49e-81	91.74	Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A1S3BIS6	8.53e-45	61.98	Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103490030...	[more]
A0A5D3BVF6	8.53e-45	61.98	Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A6J1DIF6	5.79e-41	59.83	Epidermal patterning factor-like protein OS=Momordica charantia OX=3673 GN=LOC11...	[more]

BLAST of Csor.00g198030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G13898.1	3.7e-13	43.04	unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana prot...	[more]
AT5G10310.1	1.1e-09	35.23	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G30370.1	2.5e-09	37.66	allergen-related	[more]
AT2G30370.2	2.5e-09	37.66	allergen-related	[more]
AT3G22820.1	5.7e-06	38.33	allergen-related	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF17181	EPF	coord: 61..121 e-value: 4.1E-18 score: 65.1
None	No IPR available	PANTHER	PTHR33109:SF14	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 3	coord: 3..121
IPR039455	EPIDERMAL PATTERNING FACTOR-like protein	PANTHER	PTHR33109	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4	coord: 3..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g198030.m01	Csor.00g198030.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010052	guard cell differentiation
biological_process	GO:0010374	stomatal complex development
cellular_component	GO:0005576	extracellular region