Csor.00g197250 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g197250
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	periodic tryptophan protein 2
Location	Csor_Chr01: 598983 .. 599870 (+)
RNA-Seq Expression	Csor.00g197250
Synteny	Csor.00g197250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATTACAGGTTTCAAAACCTGTTAGGGGCGCCTTACAGAGGAGGCAATGTTCTGATTTCGGAGGACACCTTGTTAATCTCACCCGTCGGCAACCGAATCTCCGTTACCGACCTTGTTAAGTCCCAAACGGCGACGCTTCCCGTTCAATCGTCGTCCAATATTTGTCGAATCGCCGTCTCTCCCGATGGGGCGTTCTTATTCACCGTCGACGAGAAGAATCGTTGTCTCTTCATCAATCTCCGACGCCGAGTTGTGCTTCACCGTATGTTCTTCAAGAAGCCCGTCAGTGTCGTTAAGTTCAGCCCTGATGGTGCATTTATTGCTGTTGGCACTGGGAAGTTGGTCCAAATTTGGCGCTCACCTGGGTTCAAGAAAGAGTTCTTTCCTTTTGAACTGGTACGGACTTTTGCTGATTGTAATGATAAAGTTACAGCGTTGGACTGGAGTCCGGACGGCAATTACTTGCTTGCTGGGTCGAAGGATTTGACTGTTAGGCTGCTTTTTGTGAAGAAAATAAGTGGGATCAAGTACAAACCACACTTGTTTTTGGGTCATAGAGACTCAATTGTAGGTTCGTTTTTTGGGACTAATAAGAAAACCAATAAGGTAGTAAAAGCTTATACGATTACGCGTGACTGCTATATCTTTAGTTGGGGCATTACAGAAAATAATTTGGATGAGATGGAAGTGGATAATTCGGAACCGGCCTCACCGGGGACTCCTAGTAGGGATAGTGAAGGAATTGTGGAGAGTGGTGGGGATGTTAGTGTAAAAAAGAGGAAGAATTTTGGTGATGGTAAAGCGGATGATGAAGCTGAATACTTGCTTAGAGAAAAATGGGAGTTAGTGAGGAAGGATTTTTTTCTCAGGCTCCGGCAAAGGTGA

mRNA sequence

ATGAATTACAGGTTTCAAAACCTGTTAGGGGCGCCTTACAGAGGAGGCAATGTTCTGATTTCGGAGGACACCTTGTTAATCTCACCCGTCGGCAACCGAATCTCCGTTACCGACCTTGTTAAGTCCCAAACGGCGACGCTTCCCGTTCAATCGTCGTCCAATATTTGTCGAATCGCCGTCTCTCCCGATGGGGCGTTCTTATTCACCGTCGACGAGAAGAATCGTTGTCTCTTCATCAATCTCCGACGCCGAGTTGTGCTTCACCGTATGTTCTTCAAGAAGCCCGTCAGTGTCGTTAAGTTCAGCCCTGATGGTGCATTTATTGCTGTTGGCACTGGGAAGTTGGTCCAAATTTGGCGCTCACCTGGGTTCAAGAAAGAGTTCTTTCCTTTTGAACTGGTACGGACTTTTGCTGATTGTAATGATAAAGTTACAGCGTTGGACTGGAGTCCGGACGGCAATTACTTGCTTGCTGGGTCGAAGGATTTGACTGTTAGGCTGCTTTTTGTGAAGAAAATAAGTGGGATCAAGTACAAACCACACTTGTTTTTGGGTCATAGAGACTCAATTGTAGGTTCGTTTTTTGGGACTAATAAGAAAACCAATAAGGTAGTAAAAGCTTATACGATTACGCGTGACTGCTATATCTTTAGTTGGGGCATTACAGAAAATAATTTGGATGAGATGGAAGTGGATAATTCGGAACCGGCCTCACCGGGGACTCCTAGTAGGGATAGTGAAGGAATTGTGGAGAGTGGTGGGGATGTTAGTGTAAAAAAGAGGAAGAATTTTGGTGATGGTAAAGCGGATGATGAAGCTGAATACTTGCTTAGAGAAAAATGGGAGTTAGTGAGGAAGGATTTTTTTCTCAGGCTCCGGCAAAGGTGA

Coding sequence (CDS)

ATGAATTACAGGTTTCAAAACCTGTTAGGGGCGCCTTACAGAGGAGGCAATGTTCTGATTTCGGAGGACACCTTGTTAATCTCACCCGTCGGCAACCGAATCTCCGTTACCGACCTTGTTAAGTCCCAAACGGCGACGCTTCCCGTTCAATCGTCGTCCAATATTTGTCGAATCGCCGTCTCTCCCGATGGGGCGTTCTTATTCACCGTCGACGAGAAGAATCGTTGTCTCTTCATCAATCTCCGACGCCGAGTTGTGCTTCACCGTATGTTCTTCAAGAAGCCCGTCAGTGTCGTTAAGTTCAGCCCTGATGGTGCATTTATTGCTGTTGGCACTGGGAAGTTGGTCCAAATTTGGCGCTCACCTGGGTTCAAGAAAGAGTTCTTTCCTTTTGAACTGGTACGGACTTTTGCTGATTGTAATGATAAAGTTACAGCGTTGGACTGGAGTCCGGACGGCAATTACTTGCTTGCTGGGTCGAAGGATTTGACTGTTAGGCTGCTTTTTGTGAAGAAAATAAGTGGGATCAAGTACAAACCACACTTGTTTTTGGGTCATAGAGACTCAATTGTAGGTTCGTTTTTTGGGACTAATAAGAAAACCAATAAGGTAGTAAAAGCTTATACGATTACGCGTGACTGCTATATCTTTAGTTGGGGCATTACAGAAAATAATTTGGATGAGATGGAAGTGGATAATTCGGAACCGGCCTCACCGGGGACTCCTAGTAGGGATAGTGAAGGAATTGTGGAGAGTGGTGGGGATGTTAGTGTAAAAAAGAGGAAGAATTTTGGTGATGGTAAAGCGGATGATGAAGCTGAATACTTGCTTAGAGAAAAATGGGAGTTAGTGAGGAAGGATTTTTTTCTCAGGCTCCGGCAAAGGTGA

Protein sequence

MNYRFQNLLGAPYRGGNVLISEDTLLISPVGNRISVTDLVKSQTATLPVQSSSNICRIAVSPDGAFLFTVDEKNRCLFINLRRRVVLHRMFFKKPVSVVKFSPDGAFIAVGTGKLVQIWRSPGFKKEFFPFELVRTFADCNDKVTALDWSPDGNYLLAGSKDLTVRLLFVKKISGIKYKPHLFLGHRDSIVGSFFGTNKKTNKVVKAYTITRDCYIFSWGITENNLDEMEVDNSEPASPGTPSRDSEGIVESGGDVSVKKRKNFGDGKADDEAEYLLREKWELVRKDFFLRLRQR

Homology

[Close]

BLAST of Csor.00g197250 vs. ExPASy Swiss-Prot
Match: Q8VYZ5 (Periodic tryptophan protein 2 OS=Arabidopsis thaliana OX=3702 GN=PWP2 PE=1 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 1.0e-98
Identity = 182/299 (60.87%), Postives = 226/299 (75.59%), Query Frame = 0


Query: 1   MNYRFQNLLGAPYRGGNVLISEDTLLISPVGNRISVTDLVKSQTATLPVQSSSNICRIAV 60
           M +RF+NLLGAPYRGGN +I+++T LISPVGNR+SVTDL K+ + TLP+++S+NICR+A 
Sbjct: 1   MEFRFENLLGAPYRGGNAVITKNTQLISPVGNRVSVTDLSKNHSVTLPLETSTNICRLAS 60

Query: 61  SPDGAFLFTVDEKNRCLFINLRRRVVLHRMFFKKPVSVVKFSPDGAFIAVGTGKLVQIWR 120
           SPDG FL  VDE+NRCLFINL RRVVLHR+ FK  V  +KFSP+G FIAVG GKLV+IWR
Sbjct: 61  SPDGTFLLAVDEQNRCLFINLPRRVVLHRITFKDKVGALKFSPNGKFIAVGIGKLVEIWR 120

Query: 121 SPGFKKEFFPFELVRTFADCNDKVTALDWSPDGNYLLAGSKDLTVRLLFVKKISGIKYKP 180
           SPGF++   PFE VRTFA+ +DKV +L+WS D +YLL GS+DL  RL  V+K+ G+  KP
Sbjct: 121 SPGFRRAVLPFERVRTFANSDDKVVSLEWSLDSDYLLVGSRDLAARLFCVRKLKGVLNKP 180

Query: 181 HLFLGHRDSIVGSFFGTNKKTNKVVKAYTITRDCYIFSWGITENN--LDEMEVDNSEPAS 240
            LFLGHRDS+VG FFG +K TNKV +A+TI RD YIFSWG TE +  +DE E  +SEP S
Sbjct: 181 FLFLGHRDSVVGCFFGVDKMTNKVNRAFTIARDGYIFSWGYTEKDVKMDESEDGHSEPPS 240

Query: 241 PGTPSRDSEGIVESGGDV--SVKKRKNFGDGKA--------DDEAEYLLREKWELVRKD 288
           P TP R  E +VE+GG V   +KKRK + DGK         DD+ EY+ R KW L+RKD
Sbjct: 241 PVTPDRADEVMVENGGGVGTELKKRKEY-DGKGLESDEEGDDDDEEYMHRGKWVLLRKD 298

[Close]

BLAST of Csor.00g197250 vs. ExPASy Swiss-Prot
Match: Q9C1X1 (Periodic tryptophan protein 2 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC713.04c PE=1 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 5.2e-42
Identity = 86/220 (39.09%), Postives = 131/220 (59.55%), Query Frame = 0


Query: 3   YRFQNLLGAPYRGGNVLISEDTL-LISPVGNRISVTDLVKSQTATLPVQSSSNICRIAVS 62
           + F NL+G  +  GN++ + D   ++SPVGNR+SV +L  + + T P ++  NI  IA+S
Sbjct: 5   FGFSNLVGTIFSKGNLVFTPDGFSILSPVGNRVSVYNLKDNTSYTFPFENHKNISHIALS 64

Query: 63  PDGAFLFTVDEKNRCLFINLRRRVVLHRMFFKKPVSVVKFSPDGAFIAVGTGKLVQIWRS 122
           P    L +VDE+ RC+  N  RR VLH   FK PV  ++FSP+G F AV  GKL+Q+WR+
Sbjct: 65  PTSTLLLSVDEEGRCILCNFLRRSVLHYFNFKSPVGAIEFSPNGKFFAVSLGKLIQVWRT 124

Query: 123 PGF--KKEFFPFELVRTFADCNDKVTALDWSPDGNYLLAGSKDLTVRLLFVKKISGIKYK 182
           P    ++EF PF L R +    D + ++ WS D  + ++ SKDLT RL  V  I G  + 
Sbjct: 125 PNSLEEREFAPFVLHREYTGHFDDIVSISWSADSRFFISTSKDLTARLHSVDPIEG--FH 184

Query: 183 PHLFLGHRDSIVGSFFGTNKKTNKVVKAYTITRDCYIFSW 220
           P    GH++++V  FF  +++T      YT+++D  +F W
Sbjct: 185 PCALTGHKNTVVSGFFSKDQQT-----IYTVSKDGALFVW 217

[Close]

BLAST of Csor.00g197250 vs. ExPASy Swiss-Prot
Match: P25635 (Periodic tryptophan protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PWP2 PE=1 SV=2)

HSP 1 Score: 165.2 bits (417), Expect = 1.1e-39
Identity = 85/237 (35.86%), Postives = 135/237 (56.96%), Query Frame = 0


Query: 2   NYRFQNLLGAPYRGGNVLISED-TLLISPVGNRISVTDLVKSQTATLPVQSSSNICRIAV 61
           +++F NLLG  YR GN+  S+D   L+SPVGNR+SV DL+ +++ T   +   NI  I +
Sbjct: 4   DFKFSNLLGTVYRQGNITFSDDGKQLLSPVGNRVSVFDLINNKSFTFEYEHRKNIAAIDL 63

Query: 62  SPDGAFLFTVDEKNRCLFINLRRRVVLHRMFFKKPVSVVKFSPDGAFIAVGTGKLVQIWR 121
           +  G  L ++DE  R + +N + R VLH   FK+  S VKFSPDG   A+ +G+ +QIW+
Sbjct: 64  NKQGTLLISIDEDGRAILVNFKARNVLHHFNFKEKCSAVKFSPDGRLFALASGRFLQIWK 123

Query: 122 SPGFKK--EFFPFELVRTFADCNDKVTALDWSPDGNYLLAGSKDLTVRLLFVKKISGIKY 181
           +P   K  +F PF   R  A     +T+L WS D  ++L  SKDL+ ++  V        
Sbjct: 124 TPDVNKDRQFAPFVRHRVHAGHFQDITSLTWSQDSRFILTTSKDLSAKIWSVDS-EEKNL 183

Query: 182 KPHLFLGHRDSIVGSFFGTNKKTNKVVKAYTITRDCYIFSWGITENNLDEMEVDNSE 236
               F GHRD ++G+FF  +++     K YT+++D  +F W  T+   D+ + ++ +
Sbjct: 184 AATTFNGHRDYVMGAFFSHDQE-----KIYTVSKDGAVFVWEFTKRPSDDDDNESED 234

[Close]

BLAST of Csor.00g197250 vs. ExPASy Swiss-Prot
Match: Q9C270 (Periodic tryptophan protein 2 homolog OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=B18D24.40 PE=3 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.9e-39
Identity = 90/245 (36.73%), Postives = 136/245 (55.51%), Query Frame = 0


Query: 2   NYRFQNLLGAPYRGGNVLISED-TLLISPVGNRISVTDLVKSQTATLPVQSSSNICRIAV 61
           +++F NLLG  Y  GN+L S D T L SPVGNR++V +LV +++ TLP     NI RI +
Sbjct: 4   DFKFSNLLGTVYCQGNLLFSPDGTHLFSPVGNRVTVFNLVDNKSYTLPFSHRKNIARIGL 63

Query: 62  SPDGAFLFTVDEKNRCLFINLRRRVVLHRMFFKKPVSVVKFSPDGAFIAVGTGKLVQIWR 121
           +P G  L ++DE  + +  N+ RRVVL+   FK PV+ + FSP G    VG G+ +++W 
Sbjct: 64  TPQGNLLLSIDEDGQAILTNVPRRVVLYHFSFKAPVTALSFSPSGRHFIVGLGRKIEVWH 123

Query: 122 SPGF-------KKEFFPFELVRTFADCNDKVTALDWSPDGNYLLAGSKDLTVRLLFVKKI 181
            P         + EF PF    T     D V  ++WS D  + L  SKDLT R+  V + 
Sbjct: 124 VPSTPDANADGELEFAPFVKHHTHVQHFDDVRHIEWSHDSRFFLTSSKDLTARIWSVDQE 183

Query: 182 SGIKYKPHLFLGHRDSIVGSFFGTNKKTNKVVKAYTITRDCYIFSWG-ITENNLDEMEVD 238
            G  + P +  GHR  +VG++F  +++T      YT+++D  +F W  + +   DE  VD
Sbjct: 184 EG--FTPTVLSGHRQGVVGAWFSKDQET-----IYTVSKDGAVFDWQYVAKPGQDEDMVD 241

[Close]

BLAST of Csor.00g197250 vs. ExPASy Swiss-Prot
Match: Q8BU03 (Periodic tryptophan protein 2 homolog OS=Mus musculus OX=10090 GN=Pwp2 PE=1 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 3.6e-35
Identity = 81/218 (37.16%), Postives = 122/218 (55.96%), Query Frame = 0


Query: 3   YRFQNLLGAPYRGGNVLISED-TLLISPVGNRISVTDLVKSQTATLPVQSSSNICRIAVS 62
           YRF NLLG  YR GN+  + D   +ISPVGNR++V DL  +++ TLP+ +  NI  + +S
Sbjct: 5   YRFSNLLGTVYRCGNLNFTHDGNSVISPVGNRVTVFDLKNNRSNTLPLATKYNIKCVGLS 64

Query: 63  PDGAFLFTVDEKNRCLFINLRRRVVLHRMFFKKPVSVVKFSPDGAFIAVGTGKLVQIWRS 122
           PDG     VDE    L ++L  R VLH   FK  V  V FSPDG    V  G + Q++ +
Sbjct: 65  PDGRLAIIVDEGGAALLVSLVCRSVLHHFHFKGSVHSVSFSPDGRKFVVTKGNIAQMYHA 124

Query: 123 PGFKKEFFPFELVRTFADCNDKVTALDWSPDGNYLLAGSKDLTVRLLFVKKISGIKYKPH 182
           PG K+EF  F L +T+    D+ T +DW+ D    + GSKD++  +   ++   + Y  +
Sbjct: 125 PGKKREFNAFVLDKTYFGPYDETTCIDWTDDSKCFVVGSKDMSTWVFGAERWDNLIY--Y 184

Query: 183 LFLGHRDSIVGSFFGTNKKTNKVVKAYTITRDCYIFSW 220
              GH+D+IV  FF +N      +  Y++++D  +  W
Sbjct: 185 ALSGHKDAIVACFFESNS-----LDLYSLSQDGALCVW 215

[Close]

BLAST of Csor.00g197250 vs. NCBI nr
Match: KAG6606783.1 (Periodic tryptophan protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 597 bits (1540), Expect = 1.71e-215
Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 0


Query: 1   MNYRFQNLLGAPYRGGNVLISEDTLLISPVGNRISVTDLVKSQTATLPVQSSSNICRIAV 60
           MNYRFQNLLGAPYRGGNVLISEDTLLISPVGNRISVTDLVKSQTATLPVQSSSNICRIAV
Sbjct: 1   MNYRFQNLLGAPYRGGNVLISEDTLLISPVGNRISVTDLVKSQTATLPVQSSSNICRIAV 60

Query: 61  SPDGAFLFTVDEKNRCLFINLRRRVVLHRMFFKKPVSVVKFSPDGAFIAVGTGKLVQIWR 120
           SPDGAFLFTVDEKNRCLFINLRRRVVLHRMFFKKPVSVVKFSPDGAFIAVGTGKLVQIWR
Sbjct: 61  SPDGAFLFTVDEKNRCLFINLRRRVVLHRMFFKKPVSVVKFSPDGAFIAVGTGKLVQIWR 120

Query: 121 SPGFKKEFFPFELVRTFADCNDKVTALDWSPDGNYLLAGSKDLTVRLLFVKKISGIKYKP 180
           SPGFKKEFFPFELVRTFADCNDKVTALDWSPDGNYLLAGSKDLTVRLLFVKKISGIKYKP
Sbjct: 121 SPGFKKEFFPFELVRTFADCNDKVTALDWSPDGNYLLAGSKDLTVRLLFVKKISGIKYKP 180

Query: 181 HLFLGHRDSIVGSFFGTNKKTNKVVKAYTITRDCYIFSWGITENNLDEMEVDNSEPASPG 240
           HLFLGHRDSIVGSFFGTNKKTNKVVKAYTITRDCYIFSWGITENNLDEMEVDNSEPASPG
Sbjct: 181 HLFLGHRDSIVGSFFGTNKKTNKVVKAYTITRDCYIFSWGITENNLDEMEVDNSEPASPG 240

Query: 241 TPSRDSEGIVESGGDVSVKKRKNFGDGKADDEAEYLLREKWELVRKDFFLRLRQR 295
           TPSRDSEGIVESGGDVSVKKRKNFGDGKADDEAEYLLREKWELVRKDFFLRLRQR
Sbjct: 241 TPSRDSEGIVESGGDVSVKKRKNFGDGKADDEAEYLLREKWELVRKDFFLRLRQR 295

[Close]

BLAST of Csor.00g197250 vs. NCBI nr
Match: KAG7036497.1 (Periodic tryptophan protein 2-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 585 bits (1507), Expect = 1.22e-201
Identity = 288/289 (99.65%), Postives = 288/289 (99.65%), Query Frame = 0


Query: 1   MNYRFQNLLGAPYRGGNVLISEDTLLISPVGNRISVTDLVKSQTATLPVQSSSNICRIAV 60
           MNYRFQNLLGAPYRGGNVLISEDTLLISPVGNRISVTDLVKSQTATLPVQSSSNICRIAV
Sbjct: 1   MNYRFQNLLGAPYRGGNVLISEDTLLISPVGNRISVTDLVKSQTATLPVQSSSNICRIAV 60

Query: 61  SPDGAFLFTVDEKNRCLFINLRRRVVLHRMFFKKPVSVVKFSPDGAFIAVGTGKLVQIWR 120
           SPDGAFLFTVDEKNRCLFINLRRRVVLHRMFFKKPVSVVKFSPDGAFIAVGTGKLVQIWR
Sbjct: 61  SPDGAFLFTVDEKNRCLFINLRRRVVLHRMFFKKPVSVVKFSPDGAFIAVGTGKLVQIWR 120

Query: 121 SPGFKKEFFPFELVRTFADCNDKVTALDWSPDGNYLLAGSKDLTVRLLFVKKISGIKYKP 180
           SPGFKKEFFPFELVRTFADCNDKVTALDWSPDGNYLLAGSKDLTVRLLFVKKISGIKYKP
Sbjct: 121 SPGFKKEFFPFELVRTFADCNDKVTALDWSPDGNYLLAGSKDLTVRLLFVKKISGIKYKP 180

Query: 181 HLFLGHRDSIVGSFFGTNKKTNKVVKAYTITRDCYIFSWGITENNLDEMEVDNSEPASPG 240
           HLFLGHRDSIVGSFFGTNKKTNKVVKAYTITRDCYIFSWGITENNLDEMEVDNSEPASPG
Sbjct: 181 HLFLGHRDSIVGSFFGTNKKTNKVVKAYTITRDCYIFSWGITENNLDEMEVDNSEPASPG 240

Query: 241 TPSRDSEGIVESGGDVSVKKRKNFGDGKADDEAEYLLREKWELVRKDFF 289
           TPSRDSEGIVESGGDVSVKKRKNFGDGKADDEAEYLLREKWELVRKD F
Sbjct: 241 TPSRDSEGIVESGGDVSVKKRKNFGDGKADDEAEYLLREKWELVRKDCF 289

[Close]

BLAST of Csor.00g197250 vs. NCBI nr
Match: XP_023524820.1 (periodic tryptophan protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 577 bits (1487), Expect = 1.28e-198
Identity = 285/289 (98.62%), Postives = 285/289 (98.62%), Query Frame = 0


Query: 1   MNYRFQNLLGAPYRGGNVLISEDTLLISPVGNRISVTDLVKSQTATLPVQSSSNICRIAV 60
           MNYRFQNLLGAPYRGGNVLISEDTLLISPVGNRISVTDLVKSQTATLPVQSSSNICRIAV
Sbjct: 1   MNYRFQNLLGAPYRGGNVLISEDTLLISPVGNRISVTDLVKSQTATLPVQSSSNICRIAV 60

Query: 61  SPDGAFLFTVDEKNRCLFINLRRRVVLHRMFFKKPVSVVKFSPDGAFIAVGTGKLVQIWR 120
           SPDGAFLFTVDEKNRCLFINLRRRVVLHRMFFKKPVSVVKFSPDGAFIAVGTGKLVQIWR
Sbjct: 61  SPDGAFLFTVDEKNRCLFINLRRRVVLHRMFFKKPVSVVKFSPDGAFIAVGTGKLVQIWR 120

Query: 121 SPGFKKEFFPFELVRTFADCNDKVTALDWSPDGNYLLAGSKDLTVRLLFVKKISGIKYKP 180
           SPGFKKEFFPFELVRTFADCNDKVTALDWSPDGNYLLAGSKDLTVRLLFVKKISGIKYKP
Sbjct: 121 SPGFKKEFFPFELVRTFADCNDKVTALDWSPDGNYLLAGSKDLTVRLLFVKKISGIKYKP 180

Query: 181 HLFLGHRDSIVGSFFGTNKKTNKVVKAYTITRDCYIFSWGITENNLDEMEVDNSEPASPG 240
           HLFLGHRDSIVGSFFGTNKKTNKVVKAYTITRDCYIFSWGITENNLDEMEVDN EPASPG
Sbjct: 181 HLFLGHRDSIVGSFFGTNKKTNKVVKAYTITRDCYIFSWGITENNLDEMEVDNLEPASPG 240

Query: 241 TPSRDSEGIVESGGDVSVKKRKNFGDGKADDEAEYLLREKWELVRKDFF 289
           TPSRDSEG VESGGDVSVKKRKNFGD KADDEAEYLLREKWELVRKD F
Sbjct: 241 TPSRDSEGNVESGGDVSVKKRKNFGDDKADDEAEYLLREKWELVRKDCF 289

[Close]

BLAST of Csor.00g197250 vs. NCBI nr
Match: XP_022948548.1 (periodic tryptophan protein 2 isoform X1 [Cucurbita moschata])

HSP 1 Score: 577 bits (1486), Expect = 1.80e-198
Identity = 285/289 (98.62%), Postives = 285/289 (98.62%), Query Frame = 0


Query: 1   MNYRFQNLLGAPYRGGNVLISEDTLLISPVGNRISVTDLVKSQTATLPVQSSSNICRIAV 60
           MNYRFQNLLGAPYRGGNVLISEDTLLISPVGNRISVTDLVKSQTATLPVQSSSNICRIAV
Sbjct: 1   MNYRFQNLLGAPYRGGNVLISEDTLLISPVGNRISVTDLVKSQTATLPVQSSSNICRIAV 60

Query: 61  SPDGAFLFTVDEKNRCLFINLRRRVVLHRMFFKKPVSVVKFSPDGAFIAVGTGKLVQIWR 120
           SPDGAFLFTVDEKNRCLFINLRRRVVLHRMFFKKPVSVVKFSPDGAFIAVGTGKLVQIWR
Sbjct: 61  SPDGAFLFTVDEKNRCLFINLRRRVVLHRMFFKKPVSVVKFSPDGAFIAVGTGKLVQIWR 120

Query: 121 SPGFKKEFFPFELVRTFADCNDKVTALDWSPDGNYLLAGSKDLTVRLLFVKKISGIKYKP 180
           SPGFKKEFFPFELVRTFADCNDKVTAL WSPDGNYLLAGSKDLTVRLLFVKKISGIKYKP
Sbjct: 121 SPGFKKEFFPFELVRTFADCNDKVTALGWSPDGNYLLAGSKDLTVRLLFVKKISGIKYKP 180

Query: 181 HLFLGHRDSIVGSFFGTNKKTNKVVKAYTITRDCYIFSWGITENNLDEMEVDNSEPASPG 240
           HLFLGHRDSIVGSFFGTNKKTNKVVKAYTITRDCYIFSWGITENNLDEMEVDNSEPASPG
Sbjct: 181 HLFLGHRDSIVGSFFGTNKKTNKVVKAYTITRDCYIFSWGITENNLDEMEVDNSEPASPG 240

Query: 241 TPSRDSEGIVESGGDVSVKKRKNFGDGKADDEAEYLLREKWELVRKDFF 289
           TPSRDSEG VESGGDVSVKKRKNFGDGKADDEAEYLLREKWEL RKD F
Sbjct: 241 TPSRDSEGNVESGGDVSVKKRKNFGDGKADDEAEYLLREKWELGRKDCF 289

[Close]

BLAST of Csor.00g197250 vs. NCBI nr
Match: XP_022998916.1 (periodic tryptophan protein 2 isoform X1 [Cucurbita maxima])

HSP 1 Score: 569 bits (1467), Expect = 1.33e-195
Identity = 282/289 (97.58%), Postives = 283/289 (97.92%), Query Frame = 0


Query: 1   MNYRFQNLLGAPYRGGNVLISEDTLLISPVGNRISVTDLVKSQTATLPVQSSSNICRIAV 60
           MNYRFQNLLGAPYRGGNVLISEDTLLISPVGNRISVTDLVKSQTATLPVQSSSNICRIAV
Sbjct: 1   MNYRFQNLLGAPYRGGNVLISEDTLLISPVGNRISVTDLVKSQTATLPVQSSSNICRIAV 60

Query: 61  SPDGAFLFTVDEKNRCLFINLRRRVVLHRMFFKKPVSVVKFSPDGAFIAVGTGKLVQIWR 120
           SPDGAFLFTVDEKNRCLFINLRRRVVLHRMFFKK VSVVKFS DGAFIAVG GKLVQIWR
Sbjct: 61  SPDGAFLFTVDEKNRCLFINLRRRVVLHRMFFKKLVSVVKFSSDGAFIAVGIGKLVQIWR 120

Query: 121 SPGFKKEFFPFELVRTFADCNDKVTALDWSPDGNYLLAGSKDLTVRLLFVKKISGIKYKP 180
           SPGFKKEFFPFELVRTFADCNDKVTALDWSPDGNYLLAGSKDLTVRLL+VKKISGIKYKP
Sbjct: 121 SPGFKKEFFPFELVRTFADCNDKVTALDWSPDGNYLLAGSKDLTVRLLYVKKISGIKYKP 180

Query: 181 HLFLGHRDSIVGSFFGTNKKTNKVVKAYTITRDCYIFSWGITENNLDEMEVDNSEPASPG 240
           HLFLGHRDSIVGSFFGTNKKTNKVVKAYTITRDCYIFSWGITENNLDEMEVDN EPASPG
Sbjct: 181 HLFLGHRDSIVGSFFGTNKKTNKVVKAYTITRDCYIFSWGITENNLDEMEVDNLEPASPG 240

Query: 241 TPSRDSEGIVESGGDVSVKKRKNFGDGKADDEAEYLLREKWELVRKDFF 289
           TPSRDSEG VESGGDVSVKKRKNFGDGKADDEAEYLLREKWELVRKD F
Sbjct: 241 TPSRDSEGNVESGGDVSVKKRKNFGDGKADDEAEYLLREKWELVRKDCF 289

[Close]

BLAST of Csor.00g197250 vs. ExPASy TrEMBL
Match: A0A6J1G9L5 (periodic tryptophan protein 2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452195 PE=3 SV=1)

HSP 1 Score: 577 bits (1486), Expect = 8.74e-199
Identity = 285/289 (98.62%), Postives = 285/289 (98.62%), Query Frame = 0


Query: 1   MNYRFQNLLGAPYRGGNVLISEDTLLISPVGNRISVTDLVKSQTATLPVQSSSNICRIAV 60
           MNYRFQNLLGAPYRGGNVLISEDTLLISPVGNRISVTDLVKSQTATLPVQSSSNICRIAV
Sbjct: 1   MNYRFQNLLGAPYRGGNVLISEDTLLISPVGNRISVTDLVKSQTATLPVQSSSNICRIAV 60

Query: 61  SPDGAFLFTVDEKNRCLFINLRRRVVLHRMFFKKPVSVVKFSPDGAFIAVGTGKLVQIWR 120
           SPDGAFLFTVDEKNRCLFINLRRRVVLHRMFFKKPVSVVKFSPDGAFIAVGTGKLVQIWR
Sbjct: 61  SPDGAFLFTVDEKNRCLFINLRRRVVLHRMFFKKPVSVVKFSPDGAFIAVGTGKLVQIWR 120

Query: 121 SPGFKKEFFPFELVRTFADCNDKVTALDWSPDGNYLLAGSKDLTVRLLFVKKISGIKYKP 180
           SPGFKKEFFPFELVRTFADCNDKVTAL WSPDGNYLLAGSKDLTVRLLFVKKISGIKYKP
Sbjct: 121 SPGFKKEFFPFELVRTFADCNDKVTALGWSPDGNYLLAGSKDLTVRLLFVKKISGIKYKP 180

Query: 181 HLFLGHRDSIVGSFFGTNKKTNKVVKAYTITRDCYIFSWGITENNLDEMEVDNSEPASPG 240
           HLFLGHRDSIVGSFFGTNKKTNKVVKAYTITRDCYIFSWGITENNLDEMEVDNSEPASPG
Sbjct: 181 HLFLGHRDSIVGSFFGTNKKTNKVVKAYTITRDCYIFSWGITENNLDEMEVDNSEPASPG 240

Query: 241 TPSRDSEGIVESGGDVSVKKRKNFGDGKADDEAEYLLREKWELVRKDFF 289
           TPSRDSEG VESGGDVSVKKRKNFGDGKADDEAEYLLREKWEL RKD F
Sbjct: 241 TPSRDSEGNVESGGDVSVKKRKNFGDGKADDEAEYLLREKWELGRKDCF 289

[Close]

BLAST of Csor.00g197250 vs. ExPASy TrEMBL
Match: A0A6J1KBJ3 (periodic tryptophan protein 2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493437 PE=3 SV=1)

HSP 1 Score: 569 bits (1467), Expect = 6.43e-196
Identity = 282/289 (97.58%), Postives = 283/289 (97.92%), Query Frame = 0


Query: 1   MNYRFQNLLGAPYRGGNVLISEDTLLISPVGNRISVTDLVKSQTATLPVQSSSNICRIAV 60
           MNYRFQNLLGAPYRGGNVLISEDTLLISPVGNRISVTDLVKSQTATLPVQSSSNICRIAV
Sbjct: 1   MNYRFQNLLGAPYRGGNVLISEDTLLISPVGNRISVTDLVKSQTATLPVQSSSNICRIAV 60

Query: 61  SPDGAFLFTVDEKNRCLFINLRRRVVLHRMFFKKPVSVVKFSPDGAFIAVGTGKLVQIWR 120
           SPDGAFLFTVDEKNRCLFINLRRRVVLHRMFFKK VSVVKFS DGAFIAVG GKLVQIWR
Sbjct: 61  SPDGAFLFTVDEKNRCLFINLRRRVVLHRMFFKKLVSVVKFSSDGAFIAVGIGKLVQIWR 120

Query: 121 SPGFKKEFFPFELVRTFADCNDKVTALDWSPDGNYLLAGSKDLTVRLLFVKKISGIKYKP 180
           SPGFKKEFFPFELVRTFADCNDKVTALDWSPDGNYLLAGSKDLTVRLL+VKKISGIKYKP
Sbjct: 121 SPGFKKEFFPFELVRTFADCNDKVTALDWSPDGNYLLAGSKDLTVRLLYVKKISGIKYKP 180

Query: 181 HLFLGHRDSIVGSFFGTNKKTNKVVKAYTITRDCYIFSWGITENNLDEMEVDNSEPASPG 240
           HLFLGHRDSIVGSFFGTNKKTNKVVKAYTITRDCYIFSWGITENNLDEMEVDN EPASPG
Sbjct: 181 HLFLGHRDSIVGSFFGTNKKTNKVVKAYTITRDCYIFSWGITENNLDEMEVDNLEPASPG 240

Query: 241 TPSRDSEGIVESGGDVSVKKRKNFGDGKADDEAEYLLREKWELVRKDFF 289
           TPSRDSEG VESGGDVSVKKRKNFGDGKADDEAEYLLREKWELVRKD F
Sbjct: 241 TPSRDSEGNVESGGDVSVKKRKNFGDGKADDEAEYLLREKWELVRKDCF 289

[Close]

BLAST of Csor.00g197250 vs. ExPASy TrEMBL
Match: A0A0A0KTC0 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G004810 PE=3 SV=1)

HSP 1 Score: 525 bits (1353), Expect = 9.70e-179
Identity = 257/289 (88.93%), Postives = 268/289 (92.73%), Query Frame = 0


Query: 1   MNYRFQNLLGAPYRGGNVLISEDTLLISPVGNRISVTDLVKSQTATLPVQSSSNICRIAV 60
           MNYRFQNLLGAPYRGGNVLISEDTLLISPVGNRISVTDLVKSQT TLP+QSSSNICRIA+
Sbjct: 1   MNYRFQNLLGAPYRGGNVLISEDTLLISPVGNRISVTDLVKSQTTTLPLQSSSNICRIAL 60

Query: 61  SPDGAFLFTVDEKNRCLFINLRRRVVLHRMFFKKPVSVVKFSPDGAFIAVGTGKLVQIWR 120
           SPDG FLFTVDEKNRCLFINLRRRVVLHR+ FKKPVSVVKFSPDGA IAVGTGKLVQIWR
Sbjct: 61  SPDGVFLFTVDEKNRCLFINLRRRVVLHRISFKKPVSVVKFSPDGANIAVGTGKLVQIWR 120

Query: 121 SPGFKKEFFPFELVRTFADCNDKVTALDWSPDGNYLLAGSKDLTVRLLFVKKISGIKYKP 180
           +PGF+KEFFPFELVRTFADC+DKVTALDWSPDGNYLLAGSKDLT RLLFVKK+SG+KYKP
Sbjct: 121 APGFRKEFFPFELVRTFADCHDKVTALDWSPDGNYLLAGSKDLTARLLFVKKLSGVKYKP 180

Query: 181 HLFLGHRDSIVGSFFGTNKKTNKVVKAYTITRDCYIFSWGITENNLDEMEVDNSEPASPG 240
            LFLGHRDSIVGS+FGTNKKTNKV K YTITRDCYIFSWGI +NN DEMEVDNSEPASPG
Sbjct: 181 QLFLGHRDSIVGSYFGTNKKTNKVEKVYTITRDCYIFSWGIIQNNFDEMEVDNSEPASPG 240

Query: 241 TPSRDSEGIVESGGDVSVKKRKNFGDGKADDEAEYLLREKWELVRKDFF 289
           TP RDSE  VESGG VSVKKRKN GDG  D E  YLLREKW+LVRKD F
Sbjct: 241 TPRRDSEENVESGGVVSVKKRKNIGDGNVDSEDGYLLREKWQLVRKDNF 289

[Close]

BLAST of Csor.00g197250 vs. ExPASy TrEMBL
Match: A0A6J1DL53 (periodic tryptophan protein 2 OS=Momordica charantia OX=3673 GN=LOC111021076 PE=3 SV=1)

HSP 1 Score: 522 bits (1344), Expect = 2.19e-177
Identity = 251/289 (86.85%), Postives = 268/289 (92.73%), Query Frame = 0


Query: 1   MNYRFQNLLGAPYRGGNVLISEDTLLISPVGNRISVTDLVKSQTATLPVQSSSNICRIAV 60
           MNYRFQNLLGAPYRGGNV+ISEDTLLISPVGNR+SVTDLVKS T TLPVQSSSNICRIAV
Sbjct: 1   MNYRFQNLLGAPYRGGNVVISEDTLLISPVGNRVSVTDLVKSHTVTLPVQSSSNICRIAV 60

Query: 61  SPDGAFLFTVDEKNRCLFINLRRRVVLHRMFFKKPVSVVKFSPDGAFIAVGTGKLVQIWR 120
           SPDG FLFT+DE NRCLFINLRRRVVLHR+ FKKPV+VVKFSPDGAFIAVGTGKLVQIWR
Sbjct: 61  SPDGLFLFTIDENNRCLFINLRRRVVLHRISFKKPVNVVKFSPDGAFIAVGTGKLVQIWR 120

Query: 121 SPGFKKEFFPFELVRTFADCNDKVTALDWSPDGNYLLAGSKDLTVRLLFVKKISGIKYKP 180
           SPGF KEFFPFELVRTFADC+DKVTALDWSPD NYLL GSKDL+VRL+FVKK+SG KYKP
Sbjct: 121 SPGFNKEFFPFELVRTFADCHDKVTALDWSPDANYLLVGSKDLSVRLIFVKKLSGNKYKP 180

Query: 181 HLFLGHRDSIVGSFFGTNKKTNKVVKAYTITRDCYIFSWGITENNLDEMEVDNSEPASPG 240
           HLFLGHRD+IVGSFFGT+KKTNKVVK YTITRDCY+F WGI E+NLDEMEV NSEP SPG
Sbjct: 181 HLFLGHRDAIVGSFFGTDKKTNKVVKVYTITRDCYMFIWGIAESNLDEMEVYNSEPPSPG 240

Query: 241 TPSRDSEGIVESGGDVSVKKRKNFGDGKADDEAEYLLREKWELVRKDFF 289
           TP RDSE  +ESGGDVSVKKRKN+GDG  DDE EYLLREKW++VRKD F
Sbjct: 241 TPGRDSERNMESGGDVSVKKRKNYGDGNVDDEVEYLLREKWKIVRKDCF 289

[Close]

BLAST of Csor.00g197250 vs. ExPASy TrEMBL
Match: A0A1S3BZ00 (periodic tryptophan protein 2 homolog OS=Cucumis melo OX=3656 GN=LOC103494721 PE=3 SV=1)

HSP 1 Score: 521 bits (1342), Expect = 4.39e-177
Identity = 254/289 (87.89%), Postives = 266/289 (92.04%), Query Frame = 0


Query: 1   MNYRFQNLLGAPYRGGNVLISEDTLLISPVGNRISVTDLVKSQTATLPVQSSSNICRIAV 60
           MNYRFQNLLGAPYRGGNVLISEDTLLISPVGNRISVTDLVKSQT TLP+QSSSNICRIA+
Sbjct: 1   MNYRFQNLLGAPYRGGNVLISEDTLLISPVGNRISVTDLVKSQTTTLPLQSSSNICRIAL 60

Query: 61  SPDGAFLFTVDEKNRCLFINLRRRVVLHRMFFKKPVSVVKFSPDGAFIAVGTGKLVQIWR 120
           SPDG FLFTVDEKNRCLFINLRRRVVLHR+ FKKPVSVVKFSPDGA IAVGTGKLVQIWR
Sbjct: 61  SPDGVFLFTVDEKNRCLFINLRRRVVLHRISFKKPVSVVKFSPDGANIAVGTGKLVQIWR 120

Query: 121 SPGFKKEFFPFELVRTFADCNDKVTALDWSPDGNYLLAGSKDLTVRLLFVKKISGIKYKP 180
           +PGF+KEFFPFELVRTF+DC+DKVTALDWSPDGNYLLAGSKDLT RLL VKK+ G KYKP
Sbjct: 121 APGFRKEFFPFELVRTFSDCHDKVTALDWSPDGNYLLAGSKDLTARLLIVKKLGGNKYKP 180

Query: 181 HLFLGHRDSIVGSFFGTNKKTNKVVKAYTITRDCYIFSWGITENNLDEMEVDNSEPASPG 240
            LFLGHRDSIVGSFFGTNKKTNKV K YTITRDCYIFSWG+ +NN DEM+VDNSEPASPG
Sbjct: 181 QLFLGHRDSIVGSFFGTNKKTNKVEKVYTITRDCYIFSWGVIQNNFDEMDVDNSEPASPG 240

Query: 241 TPSRDSEGIVESGGDVSVKKRKNFGDGKADDEAEYLLREKWELVRKDFF 289
           TP RDSE  VESGGDVSVKKRKN GDG  D E  YLLREKW+LVRKD F
Sbjct: 241 TPRRDSEENVESGGDVSVKKRKNLGDGNVDSEDGYLLREKWQLVRKDNF 289

[Close]

BLAST of Csor.00g197250 vs. TAIR 10
Match: AT1G15440.1 (periodic tryptophan protein 2 )

HSP 1 Score: 361.3 bits (926), Expect = 7.4e-100
Identity = 182/299 (60.87%), Postives = 226/299 (75.59%), Query Frame = 0


Query: 1   MNYRFQNLLGAPYRGGNVLISEDTLLISPVGNRISVTDLVKSQTATLPVQSSSNICRIAV 60
           M +RF+NLLGAPYRGGN +I+++T LISPVGNR+SVTDL K+ + TLP+++S+NICR+A 
Sbjct: 1   MEFRFENLLGAPYRGGNAVITKNTQLISPVGNRVSVTDLSKNHSVTLPLETSTNICRLAS 60

Query: 61  SPDGAFLFTVDEKNRCLFINLRRRVVLHRMFFKKPVSVVKFSPDGAFIAVGTGKLVQIWR 120
           SPDG FL  VDE+NRCLFINL RRVVLHR+ FK  V  +KFSP+G FIAVG GKLV+IWR
Sbjct: 61  SPDGTFLLAVDEQNRCLFINLPRRVVLHRITFKDKVGALKFSPNGKFIAVGIGKLVEIWR 120

Query: 121 SPGFKKEFFPFELVRTFADCNDKVTALDWSPDGNYLLAGSKDLTVRLLFVKKISGIKYKP 180
           SPGF++   PFE VRTFA+ +DKV +L+WS D +YLL GS+DL  RL  V+K+ G+  KP
Sbjct: 121 SPGFRRAVLPFERVRTFANSDDKVVSLEWSLDSDYLLVGSRDLAARLFCVRKLKGVLNKP 180

Query: 181 HLFLGHRDSIVGSFFGTNKKTNKVVKAYTITRDCYIFSWGITENN--LDEMEVDNSEPAS 240
            LFLGHRDS+VG FFG +K TNKV +A+TI RD YIFSWG TE +  +DE E  +SEP S
Sbjct: 181 FLFLGHRDSVVGCFFGVDKMTNKVNRAFTIARDGYIFSWGYTEKDVKMDESEDGHSEPPS 240

Query: 241 PGTPSRDSEGIVESGGDV--SVKKRKNFGDGKA--------DDEAEYLLREKWELVRKD 288
           P TP R  E +VE+GG V   +KKRK + DGK         DD+ EY+ R KW L+RKD
Sbjct: 241 PVTPDRADEVMVENGGGVGTELKKRKEY-DGKGLESDEEGDDDDEEYMHRGKWVLLRKD 298

[Close]

BLAST of Csor.00g197250 vs. TAIR 10
Match: AT1G15440.2 (periodic tryptophan protein 2 )

HSP 1 Score: 291.2 bits (744), Expect = 9.4e-79
Identity = 158/299 (52.84%), Postives = 196/299 (65.55%), Query Frame = 0


Query: 1   MNYRFQNLLGAPYRGGNVLISEDTLLISPVGNRISVTDLVKSQTATLPVQSSSNICRIAV 60
           M +RF+NLLGAPYRGGN +I+++T LISPVGNR+SVTDL K+ + TLP+++S+NICR+A 
Sbjct: 1   MEFRFENLLGAPYRGGNAVITKNTQLISPVGNRVSVTDLSKNHSVTLPLETSTNICRLAS 60

Query: 61  SPDGAFLFTVDEKNRCLFINLRRRVVLHRMFFKKPVSVVKFSPDGAFIAVGTGKLVQIWR 120
           SPDG FL  VDE+NRCLFINL RRVVLHR+ FK  V  +KFSP+G FIAVG GKLV+IWR
Sbjct: 61  SPDGTFLLAVDEQNRCLFINLPRRVVLHRITFKDKVGALKFSPNGKFIAVGIGKLVEIWR 120

Query: 121 SPGFKKEFFPFELVRTFADCNDKVTALDWSPDGNYLLAGSKDLTVRLLFVKKISGIKYKP 180
           SPGF++   PFE VRTFA+ +DKV +L+WS D +YLL GS+DL  R              
Sbjct: 121 SPGFRRAVLPFERVRTFANSDDKVVSLEWSLDSDYLLVGSRDLAAR-------------- 180

Query: 181 HLFLGHRDSIVGSFFGTNKKTNKVVKAYTITRDCYIFSWGITENN--LDEMEVDNSEPAS 240
                                     A+TI RD YIFSWG TE +  +DE E  +SEP S
Sbjct: 181 --------------------------AFTIARDGYIFSWGYTEKDVKMDESEDGHSEPPS 240

Query: 241 PGTPSRDSEGIVESGGDV--SVKKRKNFGDGKA--------DDEAEYLLREKWELVRKD 288
           P TP R  E +VE+GG V   +KKRK + DGK         DD+ EY+ R KW L+RKD
Sbjct: 241 PVTPDRADEVMVENGGGVGTELKKRKEY-DGKGLESDEEGDDDDEEYMHRGKWVLLRKD 258

[Close]

BLAST of Csor.00g197250 vs. TAIR 10
Match: AT5G25150.1 (TBP-associated factor 5 )

HSP 1 Score: 45.4 bits (106), Expect = 9.0e-05
Identity = 39/149 (26.17%), Postives = 62/149 (41.61%), Query Frame = 0


Query: 46  TLPVQSSSNICRIAVSPDGAFLF--TVDEKNRCLFINLRRRVVLHRMFFKKPVSVVKFSP 105
           TL +  S  +     SP G F+   + D   R     L   +V ++     PV   +FSP
Sbjct: 412 TLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYK-GHNYPVWDAQFSP 471

Query: 106 DGAFIA-VGTGKLVQIWRSPGFKKEFFPFELVRTFADCNDKVTALDWSPDGNYLLAGSKD 165
            G + A     +  +IW     +        +R  A     V  + W P+ NY+  GS D
Sbjct: 472 FGHYFASCSHDRTARIWSMDRIQP-------LRIMAGHLSDVDCVQWHPNCNYIATGSSD 531

Query: 166 LTVRLLFVKKISGIKYKPHLFLGHRDSIV 192
            TVRL  V+    ++    +F+GHR  ++
Sbjct: 532 KTVRLWDVQTGECVR----IFIGHRSMVL 548

[Close]

BLAST of Csor.00g197250 vs. TAIR 10
Match: AT5G52820.1 (WD-40 repeat family protein / notchless protein, putative )

HSP 1 Score: 43.5 bits (101), Expect = 3.4e-04
Identity = 34/96 (35.42%), Postives = 47/96 (48.96%), Query Frame = 0


Query: 96  VSVVKFSPDGAFIAVGT-GKLVQIWRSPGFKKEFFPFELVRTFADCNDKVTALDWSPDGN 155
           V+ V FSPDG +IA  +  K V++W   G   +F     V  F      V  + WS D  
Sbjct: 363 VNHVYFSPDGKWIASASFDKSVRLWN--GITGQF-----VTVFRGHVGPVYQVSWSADSR 422

Query: 156 YLLAGSKDLTVRLLFVKKISGIKYKPHLFLGHRDSI 191
            LL+GSKD T++   + +I   K K  L  GH D +
Sbjct: 423 LLLSGSKDSTLK---IWEIRTKKLKQDL-PGHADEV 447

The following BLAST results are available for this feature:

BLAST of Csor.00g197250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VYZ5	1.0e-98	60.87	Periodic tryptophan protein 2 OS=Arabidopsis thaliana OX=3702 GN=PWP2 PE=1 SV=1	[more]
Q9C1X1	5.2e-42	39.09	Periodic tryptophan protein 2 homolog OS=Schizosaccharomyces pombe (strain 972 /...	[more]
P25635	1.1e-39	35.86	Periodic tryptophan protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / ...	[more]
Q9C270	1.9e-39	36.73	Periodic tryptophan protein 2 homolog OS=Neurospora crassa (strain ATCC 24698 / ...	[more]
Q8BU03	3.6e-35	37.16	Periodic tryptophan protein 2 homolog OS=Mus musculus OX=10090 GN=Pwp2 PE=1 SV=1	[more]

BLAST of Csor.00g197250 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6606783.1	1.71e-215	100.00	Periodic tryptophan protein 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7036497.1	1.22e-201	99.65	Periodic tryptophan protein 2-like protein [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023524820.1	1.28e-198	98.62	periodic tryptophan protein 2 [Cucurbita pepo subsp. pepo]	[more]
XP_022948548.1	1.80e-198	98.62	periodic tryptophan protein 2 isoform X1 [Cucurbita moschata]	[more]
XP_022998916.1	1.33e-195	97.58	periodic tryptophan protein 2 isoform X1 [Cucurbita maxima]	[more]

BLAST of Csor.00g197250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G9L5	8.74e-199	98.62	periodic tryptophan protein 2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1KBJ3	6.43e-196	97.58	periodic tryptophan protein 2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A0A0KTC0	9.70e-179	88.93	WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G...	[more]
A0A6J1DL53	2.19e-177	86.85	periodic tryptophan protein 2 OS=Momordica charantia OX=3673 GN=LOC111021076 PE=...	[more]
A0A1S3BZ00	4.39e-177	87.89	periodic tryptophan protein 2 homolog OS=Cucumis melo OX=3656 GN=LOC103494721 PE...	[more]

BLAST of Csor.00g197250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15440.1	7.4e-100	60.87	periodic tryptophan protein 2	[more]
AT1G15440.2	9.4e-79	52.84	periodic tryptophan protein 2	[more]
AT5G25150.1	9.0e-05	26.17	TBP-associated factor 5	[more]
AT5G52820.1	3.4e-04	35.42	WD-40 repeat family protein / notchless protein, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 83..120 e-value: 1.5 score: 15.9 coord: 130..169 e-value: 6.1E-5 score: 32.4 coord: 40..80 e-value: 26.0 score: 8.0
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 95..119 e-value: 0.24 score: 12.3 coord: 133..167 e-value: 2.0E-5 score: 25.2
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 137..167 score: 9.104886
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 31..257 e-value: 2.4E-23 score: 84.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 230..267
IPR027145	Periodic tryptophan protein 2	PANTHER	PTHR19858	WD40 REPEAT PROTEIN	coord: 1..290
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 23..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g197250.m01	Csor.00g197250.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0000028	ribosomal small subunit assembly
cellular_component	GO:0034388	Pwp2p-containing subcomplex of 90S preribosome
cellular_component	GO:0032040	small-subunit processome
molecular_function	GO:0005515	protein binding