Csor.00g196940 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g196940
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Signal recognition particle 54 kDa protein
Location	Csor_Chr01: 708037 .. 712340 (+)
RNA-Seq Expression	Csor.00g196940
Synteny	Csor.00g196940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTTAGCACAGCTTGGAGGGAGCATCTCCCGTGCCCTCCAGCAGATGAGCAATGCGACGGTCATCGACGAGAAGGTTTTGAACGAATGTCTCAACGAGATCACCCGCGCTCTTCTTCAATCCGATGTCCAATTCAAGCTTGTCCGTGACATGCAGACCAATATCAAGAAAATTGTCAATCTGGATGACCTCGCCGCCGGTCATAATAAGCGCAAGATCATTCAACAAGTATGTGTCGTTTTTATTTTCCATCTTCTCGTCATGGCCAATGATTTTTTTTTTGTTTTGTTTTTATGATTTAGCGTTTTATGAAATTAAAGTTGATCGCAAGAGTTGTAGCTGAATTTAAGACTTTTTTTTTTTTTTTTTTTTTTTTTTGTTGCTGTTGCTGCTGCTGTATCTTAGTGCTCAATGACTTTCGAAATTGTCCATATATTTGATTATGTACTACGAGAATCAATGGGAAACGAAAAATCTTTCTGAGTGCACTTAATTTTAGCTGTTTCTATGTTTCGAAGTTTATAAATATGATATGTTTTAGGATTTGTGTACTTTAACGTTGCTATAGCAATTTTTGTTCGGCTTTCCAAATTTTCAAAGTATGCTGTTGTAGAGAGATAACTGGGTGGGTTAGTACTTCCGTGGGCATCCTTGTTCTGTGGGATTCTTGTTTTGGAAAGAGAGGGTTAACCTCAAGAGTGTGACCTTATGATTAAAGAGGAAACTAGTTGGAGGTAGTAAAAGAAAAACTGAAATGGACAAAGAAGGTGATTGCAACACTCCCTAACCCTTTTGTACAGAGTAACTGATGTTTGTAGCTAACCAAGGTTAATTTCCAACGGTCAGCATTTCAAGATGATATATCCTTCATCATTTTTACGACTACTTTTGATAATAAAACCATGCTGAACAACTTTACTCGTTTTGTTGGTCTCTTCACTCACCTATTTTAAAAGTTACCTATTGTATACTATTCATTGGTAAGCTGCGTTTTAAGAGGTTTCCTTTTCTCCCTGTGTAGGCTGTATTTAATGAATTGTGCAAAATGCTTGATCCTGGGAAGCCTTCTTTTACGCCAAAGAAAGGAAAAACTAGTGTTATCATGTTTGTTGGTTTGCAAGGTATGTCAGCTGTAAGATTGTTTTCTTCAGTACTCATTTATTGATCCACTTAAATGTGGCGTTTGGACATTCAGAGTTATGAGGGTTAGTTGCTGTTATCATCATTCGTCACTATTTGAGTTTGACGAGATGAAGTCTAAAGCTACCATCTGGGAGCTGTTCTATTCACGATGGAGCATCTGAAAGATTTTTAGTTATATGTTTGTTTAGAAAAAGGATTTCTCTTATAATTCATTCTTGTTGAACTATATTTGTTTGATTCGTGAAATCCATAGTTTTCTTTTTACCATTTTTCACTTTTTTCTACATGTAATTGGTTACTCTATACTTTTTAAATTTTCTAAAATACAGGGTCTGGGAAGACCACAACATGTACGAAGTACGCATATTATCATCAGAAGAAAGGCTGGAAGCCTGCCTTGGTGTGTGCAGATACATTCAGAGCTGGTGCATTTGATCAATTGAAGCAGAATGCAACCAAAGCAAAGATTCCCTTTTATGGAAGGTTGTGTACCTATATATTATTGAGTTGACTCGACTGTGCATTTCTATGATCATGGAAACATGGTTCATTGAAAGGAATAGTAACTATATGTGAGGGGGTAGTTTTACCAAATTAATAATTTAGTGTGTTGTCCTCTTTAGAACTTTTCTTGCTAAGAGCAAACTACTTCCTTGCATGTATTGATTCTTGTGTTTGATAGTATTGGACTTCTTAGCTTTCTTTCTTCTAGCATGTTTGTAATTTGGTTGGTATTGGTGGCGGGTGAGGTATAGAAAGAGATATGTTTAGAGTTTATGGTTCCAGGTATATCCTGGAACAGAAATATGTATATACATGTGTGTGTGTGTTCCTTCTTTTCTTTTCTTTTTTTTTTTTTTTCCTTTTAGTTTTTACTTTTATACTTTAAGTTTTCTTTGTTTCGGAAGTGTGCTTGATTTATTCATCAAGGTGTCATTCAGTATATCCATTATTCTTTTGTTTCCCCATTTTGTAGTTACATGGAATCAGATCCTGTAAAAATTGCGGAGGAAGGTGTGGAGAGATTCAAGAAAGAAAATTGTGATCTCATAATTGTTGATACCAGTGGGCGTCACAAACAAGAAGCTGCTCTTTTTGAAGAAATGCGGCAAGTTTCTGAAGCAACGGTAATTTTCTTGTACTTATTTTTTTATGGCCATTTGATTATCTTGTTAAAATTCCTGACTGTTCTTTGCCTTGTCCAGAAACCGGATCTTGTTATATTTGTTATGGATAGCAGTATTGGTCAGGCAGCATTTGACCAAGCTCAAGCATTCAAACAAAGTGTTGCAGTTGGTGCTGTGATTGTGACTAAAATGGATGGTCACGCAAAGGGAGGCGGTGCTCTTAGTGCGTAAGTTTTCAAGGCTGTTTATTCCTGCTTTTTTTGGGATGAAAACCCATAATGAAAGTTGGAAACTCCATGCCGATTGTTTTGCGAAAGCTTTATTTTTCTTGGTAGTTTTTGAGCCTTATGGAACATATTTGTAGATATTCATTGGATTTATTGTTTGATCAAGTGCTTGGTCACGTTAAATAGCTTAGTCCAATTGACGCTATGAGGATATTGTGTCAAAATCTGTTACACACTTGCAGTTCTCTTTTTTCTGGGATTCATTGCATCCTATTTTAATGTTTCTACATATGAAAGATGTATAGATGCATGGTGAATCATTGAGCTAAATCTCTTTGTTTTCTACGTATGGTTGCAGTGTTGCAGCAACAAAGAGTCCTGTCATTTTCATTGGAACTGGAGAACACATGGATGAGTTTGAAGTTTTTGATGTTAAACCATTTGTCAGCCGTCTCCTAGGTGCTTTGTCTATTGAATCTGAACTTGTTGGCTTCAGTTATTGCATCTTTTCTGTTCATTACCTGATTGTTTTATTTCTTTAGGCATGGGAGACTGGTCTGGATTCATGGATAAAATTCATGAAGTCGTGCCAATGGATCAGCAACCAGAGCTTTTGCAAAAGCTTTCAGAAGGAAATTTTACTTTGAGAATTATGTACGAGCAGTTTCAGAACTTGCTTAAGATGGGTCCAATTAGCCAGGTATTATTCTGACATGATATAATATACCATTAATCTTATTATTTGCTTCTCCCATACACTTGGAAAAAAAAAAAAAAAAAAAAGAAGAAAGTAGGTTAACCTTTTGAAGTTCTGAGGGAGATTTGTGACTAGTAGTGTCACTTAGTGGTTCATCATAGTAAAAACTGTTCCTCAGGTTCTAAACTTTCCACTACTAAGGTTAATGATATCGACATAAATCTTGGAAATACGGCCTGTTTCTTGCAATAGATACTTTATAGAGGAACGCAGAGTTGCATTGTAACATCGCTTAAGCAAGTTTAGAATATGTTTTGCTTCACATTTTTATTCACAGATCTGCAACTGTCCTAGCAAATACAAGTTCTTTCTAGCCAATTTCGTGTTAAAAATAGTTGAGATAATGTGTGTTTACATGGAATTTGAACCTCTGCTCTAAATACTTGCTATACGCTGATTGGGTGGTCAAGTTTTTAATTCTTTGATTGCAGTCTTTCTTTACATCAATGACTTCTTGAAACAGACATAAGCATTATTCTAAGAAATGGTTTGTTTAGGTATTTTCAATGCTTCCTGGATTTAGTGCTGAATTGATGCCAAAAGGGCGTGAAAAGGAAAGCCAAGCGAAACTGAAACGCTACATGACTATGATGGACTCAATGACTGATGAAGGAAAGCAAAAACTATCCATATGCTCTGCCTATCTTTTTCTTGCTACCTCGGTGTCTATTGAATTTGATGATTGTGAGACTGATACATGGATTTATTATTTTAACAGAATTGGATAGCTCAAACCCGAAGCTCATGAACGAGTCAAGAATGATGCGAGTAGCACGAGGTTCAGGTCGCCGCATTCAGGAAGTAATGGAAATGATGGAAGAGTACAAACGCCTCGCCAAGGTATGGAGCAAGATGAAAGGGCTGAAGATCCCAAAGAAGGGCGAAATGAGCGCTCTATCTCGAAACATGAATGCACAGCACATGAGTAAGGTCCTTCCTCCCCAGATTTTGAAGCAAATTGGCGGGATGGGTGGCTTACAGAGCTTGATGAAGCAAATGGGTTCCAACAAAGATATGATGGGGATGTTTGGAGGTGGAGACAAGTAG

mRNA sequence

ATGGTTTTAGCACAGCTTGGAGGGAGCATCTCCCGTGCCCTCCAGCAGATGAGCAATGCGACGGTCATCGACGAGAAGGTTTTGAACGAATGTCTCAACGAGATCACCCGCGCTCTTCTTCAATCCGATGTCCAATTCAAGCTTGTCCGTGACATGCAGACCAATATCAAGAAAATTGTCAATCTGGATGACCTCGCCGCCGGTCATAATAAGCGCAAGATCATTCAACAAGCTGTATTTAATGAATTGTGCAAAATGCTTGATCCTGGGAAGCCTTCTTTTACGCCAAAGAAAGGAAAAACTAGTGTTATCATGTTTGTTGGTTTGCAAGGGTCTGGGAAGACCACAACATGTACGAAGTACGCATATTATCATCAGAAGAAAGGCTGGAAGCCTGCCTTGGTGTGTGCAGATACATTCAGAGCTGGTGCATTTGATCAATTGAAGCAGAATGCAACCAAAGCAAAGATTCCCTTTTATGGAAGTTACATGGAATCAGATCCTGTAAAAATTGCGGAGGAAGGTGTGGAGAGATTCAAGAAAGAAAATTGTGATCTCATAATTGTTGATACCAGTGGGCGTCACAAACAAGAAGCTGCTCTTTTTGAAGAAATGCGGCAAGTTTCTGAAGCAACGAAACCGGATCTTGTTATATTTGTTATGGATAGCAGTATTGGTCAGGCAGCATTTGACCAAGCTCAAGCATTCAAACAAAGTGTTGCAGTTGGTGCTGTGATTGTGACTAAAATGGATGGTCACGCAAAGGGAGGCGGTGCTCTTAGTGCTGTTGCAGCAACAAAGAGTCCTGTCATTTTCATTGGAACTGGAGAACACATGGATGAGTTTGAAGTTTTTGATGTTAAACCATTTGTCAGCCGTCTCCTAGGCATGGGAGACTGGTCTGGATTCATGGATAAAATTCATGAAGTCGTGCCAATGGATCAGCAACCAGAGCTTTTGCAAAAGCTTTCAGAAGGAAATTTTACTTTGAGAATTATGTACGAGCAGTTTCAGAACTTGCTTAAGATGGGTCCAATTAGCCAGGTATTTTCAATGCTTCCTGGATTTAGTGCTGAATTGATGCCAAAAGGGCGTGAAAAGGAAAGCCAAGCGAAACTGAAACGCTACATGACTATGATGGACTCAATGACTGATGAAGGAAAGCAAAAACTATCCATATGCTCTGCCTATCTTTTTCTTGCTACCTCGGTGTCTATTGAATTTGATGATTGTCGCCGCATTCAGGAAGTAATGGAAATGATGGAAGAGTACAAACGCCTCGCCAAGGTATGGAGCAAGATGAAAGGGCTGAAGATCCCAAAGAAGGGCGAAATGAGCGCTCTATCTCGAAACATGAATGCACAGCACATGAGTAAGGTCCTTCCTCCCCAGATTTTGAAGCAAATTGGCGGGATGGGTGGCTTACAGAGCTTGATGAAGCAAATGGGTTCCAACAAAGATATGATGGGGATGTTTGGAGGTGGAGACAAGTAG

Coding sequence (CDS)

ATGGTTTTAGCACAGCTTGGAGGGAGCATCTCCCGTGCCCTCCAGCAGATGAGCAATGCGACGGTCATCGACGAGAAGGTTTTGAACGAATGTCTCAACGAGATCACCCGCGCTCTTCTTCAATCCGATGTCCAATTCAAGCTTGTCCGTGACATGCAGACCAATATCAAGAAAATTGTCAATCTGGATGACCTCGCCGCCGGTCATAATAAGCGCAAGATCATTCAACAAGCTGTATTTAATGAATTGTGCAAAATGCTTGATCCTGGGAAGCCTTCTTTTACGCCAAAGAAAGGAAAAACTAGTGTTATCATGTTTGTTGGTTTGCAAGGGTCTGGGAAGACCACAACATGTACGAAGTACGCATATTATCATCAGAAGAAAGGCTGGAAGCCTGCCTTGGTGTGTGCAGATACATTCAGAGCTGGTGCATTTGATCAATTGAAGCAGAATGCAACCAAAGCAAAGATTCCCTTTTATGGAAGTTACATGGAATCAGATCCTGTAAAAATTGCGGAGGAAGGTGTGGAGAGATTCAAGAAAGAAAATTGTGATCTCATAATTGTTGATACCAGTGGGCGTCACAAACAAGAAGCTGCTCTTTTTGAAGAAATGCGGCAAGTTTCTGAAGCAACGAAACCGGATCTTGTTATATTTGTTATGGATAGCAGTATTGGTCAGGCAGCATTTGACCAAGCTCAAGCATTCAAACAAAGTGTTGCAGTTGGTGCTGTGATTGTGACTAAAATGGATGGTCACGCAAAGGGAGGCGGTGCTCTTAGTGCTGTTGCAGCAACAAAGAGTCCTGTCATTTTCATTGGAACTGGAGAACACATGGATGAGTTTGAAGTTTTTGATGTTAAACCATTTGTCAGCCGTCTCCTAGGCATGGGAGACTGGTCTGGATTCATGGATAAAATTCATGAAGTCGTGCCAATGGATCAGCAACCAGAGCTTTTGCAAAAGCTTTCAGAAGGAAATTTTACTTTGAGAATTATGTACGAGCAGTTTCAGAACTTGCTTAAGATGGGTCCAATTAGCCAGGTATTTTCAATGCTTCCTGGATTTAGTGCTGAATTGATGCCAAAAGGGCGTGAAAAGGAAAGCCAAGCGAAACTGAAACGCTACATGACTATGATGGACTCAATGACTGATGAAGGAAAGCAAAAACTATCCATATGCTCTGCCTATCTTTTTCTTGCTACCTCGGTGTCTATTGAATTTGATGATTGTCGCCGCATTCAGGAAGTAATGGAAATGATGGAAGAGTACAAACGCCTCGCCAAGGTATGGAGCAAGATGAAAGGGCTGAAGATCCCAAAGAAGGGCGAAATGAGCGCTCTATCTCGAAACATGAATGCACAGCACATGAGTAAGGTCCTTCCTCCCCAGATTTTGAAGCAAATTGGCGGGATGGGTGGCTTACAGAGCTTGATGAAGCAAATGGGTTCCAACAAAGATATGATGGGGATGTTTGGAGGTGGAGACAAGTAG

Protein sequence

MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIVNLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAELMPKGREKESQAKLKRYMTMMDSMTDEGKQKLSICSAYLFLATSVSIEFDDCRRIQEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQMGSNKDMMGMFGGGDK

Homology

[Close]

BLAST of Csor.00g196940 vs. ExPASy Swiss-Prot
Match: P49972 (Signal recognition particle 54 kDa protein 2 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 867.5 bits (2240), Expect = 7.5e-251
Identity = 448/505 (88.71%), Postives = 468/505 (92.67%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLA+LGGSISRALQQMSNAT+IDEKVLNECLNEITRALLQ+DVQFKLVRDM TNIKKIV
Sbjct: 1   MVLAELGGSISRALQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVRDMTTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120
           NLDDLAAGHNKR+IIQQAVFNELCK+LDPGKPSFTPKKGK S++MFVGLQGSGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRRIIQQAVFNELCKILDPGKPSFTPKKGKPSIVMFVGLQGSGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180
           YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPVKIA +GVE FK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVDGVETFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KENCDLIIVDTSGRHKQEAALFEEMRQV+EATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360
           SGFMDKIHEVVPMDQQPELLQKLSEG+FTLRIMYEQFQN+LKMGPI QVFSMLPGFSAEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYEQFQNILKMGPIGQVFSMLPGFSAEL 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMT----DEGKQKLSICSAYLFLATSVSIEFDDCRRIQE 420
           MPKGRE ESQAK+KRYMTMMDSMT    D    KL   S  + +A          R++ E
Sbjct: 361 MPKGRENESQAKIKRYMTMMDSMTNEELDSSNPKLMTDSRIMRIARGSG------RQVHE 420

Query: 421 VMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQ 480
           VM+MMEEYKRLAK+WSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQ+LKQIGGMGGLQ
Sbjct: 421 VMDMMEEYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQ 480

Query: 481 SLMKQMGSNKDMM----GMFGGGDK 498
           +LMKQMGS KDMM    GMFGGGDK
Sbjct: 481 NLMKQMGSAKDMMGGMGGMFGGGDK 499

[Close]

BLAST of Csor.00g196940 vs. ExPASy Swiss-Prot
Match: P49967 (Signal recognition particle 54 kDa protein 3 OS=Arabidopsis thaliana OX=3702 GN=SRP-54C PE=2 SV=2)

HSP 1 Score: 828.2 bits (2138), Expect = 5.0e-239
Identity = 417/498 (83.73%), Postives = 461/498 (92.57%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLA+LGG I+RA+QQMSN T+IDEK LNECLNEITRALLQSDV F LV++MQ+NIKKIV
Sbjct: 1   MVLAELGGRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120
           NL+DLAAGHNKR+II+QA+F+ELCKMLDPGKP+F PKK K SV+MFVGLQG+GKTTTCTK
Sbjct: 61  NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180
           YAYYHQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPVKIA EGV+ FK
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KENCDLIIVDTSGRHKQEA+LFEEMRQV+EATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360
           SGF+DK+ EVVP DQQPELL+KLS+GNFTLRIMY+QFQN+L MGP+ +VFSMLPG SAE+
Sbjct: 301 SGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDQFQNILNMGPLKEVFSMLPGISAEM 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDEGKQKLSICSAYLF-LATSVSIEFDDCRRIQEVME 420
           MPKG EKESQAK+KRYMTMMDSMT++   +L   +  +F  +  + I     R+++EVME
Sbjct: 361 MPKGHEKESQAKIKRYMTMMDSMTND---ELDSSNPKVFNESRMMRIARGSGRQVREVME 420

Query: 421 MMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLM 480
           M+EEYKRLAK+WSKMKGLKIPK G+MSALSRNMNAQHMSKVLPPQ+LKQIGGMGGLQSLM
Sbjct: 421 MLEEYKRLAKIWSKMKGLKIPKNGDMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLM 480

Query: 481 KQMGSNKDMMGMFGGGDK 498
           KQMGS KDMMGMFGGGDK
Sbjct: 481 KQMGSGKDMMGMFGGGDK 495

[Close]

BLAST of Csor.00g196940 vs. ExPASy Swiss-Prot
Match: P49971 (Signal recognition particle 54 kDa protein 1 OS=Solanum lycopersicum OX=4081 PE=3 SV=1)

HSP 1 Score: 817.0 bits (2109), Expect = 1.2e-235
Identity = 426/496 (85.89%), Postives = 459/496 (92.54%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRALQQMSNAT+IDEKVLNECLNEITRALLQ+DVQFKLVRDM TNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVRDMSTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120
           NL+DLAAGHNKR+IIQQAV+NELCK+LDPGKP+FT KKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61  NLEDLAAGHNKRRIIQQAVYNELCKILDPGKPAFTLKKGKPSVVMFVGLQGSGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG-SYMESDPVKIAEEGVERF 180
           YAY+HQK+GWKPALVCADTFRAGAFDQLKQNATKAKIPFYG SY ESDPVKIA +GVE F
Sbjct: 121 YAYHHQKRGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSSYTESDPVKIAVDGVETF 180

Query: 181 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQS 240
           KKENCDLIIVDTSGRHKQEAALFEEMRQVSEA KPDLVIFVMDSSIGQAAFDQAQAF+QS
Sbjct: 181 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEAQKPDLVIFVMDSSIGQAAFDQAQAFRQS 240

Query: 241 VAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
           VAVGAVIVTKMDGHAKGGGALS VAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD
Sbjct: 241 VAVGAVIVTKMDGHAKGGGALSRVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300

Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAE 360
            SG ++KI +VVPMDQQPELLQKLSEG+FTLRIMYEQFQ++LKMGP+  VFSMLPGFSAE
Sbjct: 301 LSGLVNKIQDVVPMDQQPELLQKLSEGHFTLRIMYEQFQSMLKMGPLG-VFSMLPGFSAE 360

Query: 361 LMPKGREKESQAKLKRYMTMMDSMTDEGKQKLSICSAYLFLATSVSIEFDDCRRIQEVME 420
           +MP+GREKESQAK KRYMTMMDSMTDE  +  S     L  +  + I     R + EVME
Sbjct: 361 MMPQGREKESQAKFKRYMTMMDSMTDE--ELDSTNPKILTESRIMRIARGSGRLVHEVME 420

Query: 421 MMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLM 480
           M+EEYKRLAK++SKMKGLKIPKKG+MS+LSRNMNAQ+MSKVLPPQ+LKQIGGMGGLQ+LM
Sbjct: 421 MLEEYKRLAKIFSKMKGLKIPKKGDMSSLSRNMNAQNMSKVLPPQMLKQIGGMGGLQNLM 480

Query: 481 KQMGSNKDMMGMFGGG 496
           KQMGS KDMMGMFGGG
Sbjct: 481 KQMGSAKDMMGMFGGG 493

[Close]

BLAST of Csor.00g196940 vs. ExPASy Swiss-Prot
Match: P49969 (Signal recognition particle 54 kDa protein 2 OS=Hordeum vulgare OX=4513 GN=SRP54-2 PE=2 SV=1)

HSP 1 Score: 776.9 bits (2005), Expect = 1.3e-223
Identity = 400/498 (80.32%), Postives = 443/498 (88.96%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRAL QMSNATVIDEKVL ECLNEI+RALLQSDVQFK+VRDMQTNI+KIV
Sbjct: 1   MVLAQLGGSISRALAQMSNATVIDEKVLGECLNEISRALLQSDVQFKMVRDMQTNIRKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120
           NL+ LAAG NKR+IIQQAVF ELC MLDPGKP+FTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61  NLETLAAGTNKRRIIQQAVFTELCNMLDPGKPAFTPKKGKPSVVMFVGLQGSGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180
           YAYYHQ+KG+KP+LVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIA EG+ERF+
Sbjct: 121 YAYYHQRKGFKPSLVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGLERFR 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KEN DLII+DTSGRHKQEAALFEEMRQV+EATKPDLVIFVMD SIGQAAFDQAQAFKQS 
Sbjct: 181 KENSDLIIIDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSA 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           +VGAVI+TK+DGHAKGGGALSAVAATKSPVIFIGTGEH+DEFE+FDVKPFVSRLLGMGD 
Sbjct: 241 SVGAVIITKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEIFDVKPFVSRLLGMGDL 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360
           SG MDKI +V+P DQQPELL KL+EG FTLR++YEQFQNLLKMGPI QVFSMLPGFS+EL
Sbjct: 301 SGLMDKIQDVMPADQQPELLAKLAEGTFTLRLLYEQFQNLLKMGPIGQVFSMLPGFSSEL 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMT----DEGKQKLSICSAYLFLATSVSIEFDDCRRIQE 420
           MPKG EKE QAK+KRYMT+MDSMT    D    KL   S  + +A          R+I++
Sbjct: 361 MPKGHEKEGQAKIKRYMTIMDSMTAAELDSTNPKLMTESRIIRIARGSG------RQIRD 420

Query: 421 VMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQ 480
           V +M+EEYKRLAK+WSKMKGLK+PK G+MS LS+N+N Q M+K LPPQ+LKQ+GGMGGLQ
Sbjct: 421 VTDMLEEYKRLAKMWSKMKGLKMPKNGKMSDLSQNLNIQQMTKALPPQVLKQMGGMGGLQ 480

Query: 481 SLMKQMGSNKDMMGMFGG 495
           +LMKQMG  KDM  M GG
Sbjct: 481 ALMKQMG-GKDMSKMLGG 491

[Close]

BLAST of Csor.00g196940 vs. ExPASy Swiss-Prot
Match: P49968 (Signal recognition particle 54 kDa protein 1 OS=Hordeum vulgare OX=4513 GN=SRP54-1 PE=2 SV=1)

HSP 1 Score: 773.9 bits (1997), Expect = 1.1e-222
Identity = 399/498 (80.12%), Postives = 442/498 (88.76%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRAL QMSNATVIDEKVL ECLNEI+RALLQSDVQFK+VRDMQTNI+KIV
Sbjct: 1   MVLAQLGGSISRALAQMSNATVIDEKVLGECLNEISRALLQSDVQFKMVRDMQTNIRKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120
           NL+ LAAG NKR+IIQQAVF ELC MLDPGKP+FT KKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61  NLETLAAGTNKRRIIQQAVFTELCNMLDPGKPAFTTKKGKPSVVMFVGLQGSGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180
           YAYYHQ+KG+KP+LVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIA EG+ERF+
Sbjct: 121 YAYYHQRKGFKPSLVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGLERFR 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KEN DLII+DTSGRHKQEAALFEEMRQV+EATKPDLVIFVMD SIGQAAFDQAQAFKQS 
Sbjct: 181 KENSDLIIIDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSA 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           +VGAVI+TK+DGHAKGGGALSAVAATKSPVIFIGTGEH+DEFE+FDVKPFVSRLLGMGD 
Sbjct: 241 SVGAVIITKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEIFDVKPFVSRLLGMGDL 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360
           SG MDKI +V+P DQQPELL KL+EG FTLR++YEQFQNLLKMGPI QVFSMLPGFS+EL
Sbjct: 301 SGLMDKIQDVMPADQQPELLAKLAEGTFTLRLLYEQFQNLLKMGPIGQVFSMLPGFSSEL 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMT----DEGKQKLSICSAYLFLATSVSIEFDDCRRIQE 420
           MPKG EKE QAK+KRYMT+MDSMT    D    KL   S  + +A          R+I++
Sbjct: 361 MPKGHEKEGQAKIKRYMTIMDSMTAAELDSTNPKLMTESRIIRIARGSG------RQIRD 420

Query: 421 VMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQ 480
           V +M+EEYKRLAK+WSKMKGLK+PK G+MS LS+N+N Q M+K LPPQ+LKQ+GGMGGLQ
Sbjct: 421 VTDMLEEYKRLAKMWSKMKGLKMPKNGKMSDLSQNLNIQQMTKALPPQVLKQMGGMGGLQ 480

Query: 481 SLMKQMGSNKDMMGMFGG 495
           +LMKQMG  KDM  M GG
Sbjct: 481 ALMKQMG-GKDMSKMLGG 491

[Close]

BLAST of Csor.00g196940 vs. NCBI nr
Match: KAG6606813.1 (hypothetical protein SDJN03_00155, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 973 bits (2515), Expect = 0.0
Identity = 497/497 (100.00%), Postives = 497/497 (100.00%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120
           NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180
           YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360
           SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDEGKQKLSICSAYLFLATSVSIEFDDCRRIQEVMEM 420
           MPKGREKESQAKLKRYMTMMDSMTDEGKQKLSICSAYLFLATSVSIEFDDCRRIQEVMEM
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDEGKQKLSICSAYLFLATSVSIEFDDCRRIQEVMEM 420

Query: 421 MEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMK 480
           MEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMK
Sbjct: 421 MEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMK 480

Query: 481 QMGSNKDMMGMFGGGDK 497
           QMGSNKDMMGMFGGGDK
Sbjct: 481 QMGSNKDMMGMFGGGDK 497

[Close]

BLAST of Csor.00g196940 vs. NCBI nr
Match: XP_022998349.1 (signal recognition particle 54 kDa protein 2 [Cucurbita maxima])

HSP 1 Score: 913 bits (2359), Expect = 0.0
Identity = 476/501 (95.01%), Postives = 478/501 (95.41%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120
           NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180
           YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360
           SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDE----GKQKLSICSAYLFLATSVSIEFDDCRRIQE 420
           MPKGREKESQAKLKRYMTMMDSMTDE       KL   S  + +A          RRIQE
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSG------RRIQE 420

Query: 421 VMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQ 480
           VMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQ
Sbjct: 421 VMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQ 480

Query: 481 SLMKQMGSNKDMMGMFGGGDK 497
           SLMKQMGSNKDMMGMFGGGDK
Sbjct: 481 SLMKQMGSNKDMMGMFGGGDK 495

[Close]

BLAST of Csor.00g196940 vs. NCBI nr
Match: XP_023523909.1 (signal recognition particle 54 kDa protein 2 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023523910.1 signal recognition particle 54 kDa protein 2 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023523911.1 signal recognition particle 54 kDa protein 2 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 912 bits (2358), Expect = 0.0
Identity = 476/501 (95.01%), Postives = 478/501 (95.41%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120
           NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180
           YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360
           SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDE----GKQKLSICSAYLFLATSVSIEFDDCRRIQE 420
           MPKGREKESQAKLKRYMTMMDSMTDE       KL   S  + +A          RRIQE
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRVARGSG------RRIQE 420

Query: 421 VMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQ 480
           VMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQ
Sbjct: 421 VMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQ 480

Query: 481 SLMKQMGSNKDMMGMFGGGDK 497
           SLMKQMGSNKDMMGMFGGGDK
Sbjct: 481 SLMKQMGSNKDMMGMFGGGDK 495

[Close]

BLAST of Csor.00g196940 vs. NCBI nr
Match: XP_022948401.1 (signal recognition particle 54 kDa protein 2-like [Cucurbita moschata])

HSP 1 Score: 910 bits (2352), Expect = 0.0
Identity = 475/501 (94.81%), Postives = 477/501 (95.21%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120
           NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180
           YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIG GEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGIGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360
           SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDE----GKQKLSICSAYLFLATSVSIEFDDCRRIQE 420
           MPKGREKESQAKLKRYMTMMDSMTDE       KL   S  + +A          RRIQE
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRVARGSG------RRIQE 420

Query: 421 VMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQ 480
           VMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQ
Sbjct: 421 VMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQ 480

Query: 481 SLMKQMGSNKDMMGMFGGGDK 497
           SLMKQMGSNKDMMGMFGGGDK
Sbjct: 481 SLMKQMGSNKDMMGMFGGGDK 495

[Close]

BLAST of Csor.00g196940 vs. NCBI nr
Match: KAA0044477.1 (signal recognition particle 54 kDa protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 908 bits (2347), Expect = 0.0
Identity = 469/497 (94.37%), Postives = 476/497 (95.77%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120
           NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSV+MFVGLQGSGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180
           YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIA EGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360
           SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQ+LLKMGPISQVFSMLPG SAEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQSLLKMGPISQVFSMLPGVSAEL 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDEGKQKLSICSAYLFLATSVSIEFDDCRRIQEVMEM 420
           MPKGREKESQAKLKRYMTMMDSMTDEG     + +     +  + I     RR+QEVMEM
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDEGYTNPKLINE----SRMMRIARGSGRRVQEVMEM 420

Query: 421 MEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMK 480
           MEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMK
Sbjct: 421 MEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMK 480

Query: 481 QMGSNKDMMGMFGGGDK 497
           QMGSNKDMMGMFGGGDK
Sbjct: 481 QMGSNKDMMGMFGGGDK 493

[Close]

BLAST of Csor.00g196940 vs. ExPASy TrEMBL
Match: A0A6J1KE35 (Signal recognition particle 54 kDa protein OS=Cucurbita maxima OX=3661 GN=LOC111493016 PE=3 SV=1)

HSP 1 Score: 913 bits (2359), Expect = 0.0
Identity = 476/501 (95.01%), Postives = 478/501 (95.41%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120
           NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180
           YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360
           SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDE----GKQKLSICSAYLFLATSVSIEFDDCRRIQE 420
           MPKGREKESQAKLKRYMTMMDSMTDE       KL   S  + +A          RRIQE
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSG------RRIQE 420

Query: 421 VMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQ 480
           VMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQ
Sbjct: 421 VMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQ 480

Query: 481 SLMKQMGSNKDMMGMFGGGDK 497
           SLMKQMGSNKDMMGMFGGGDK
Sbjct: 481 SLMKQMGSNKDMMGMFGGGDK 495

[Close]

BLAST of Csor.00g196940 vs. ExPASy TrEMBL
Match: A0A6J1G940 (Signal recognition particle 54 kDa protein OS=Cucurbita moschata OX=3662 GN=LOC111452092 PE=3 SV=1)

HSP 1 Score: 910 bits (2352), Expect = 0.0
Identity = 475/501 (94.81%), Postives = 477/501 (95.21%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120
           NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180
           YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIG GEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGIGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360
           SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDE----GKQKLSICSAYLFLATSVSIEFDDCRRIQE 420
           MPKGREKESQAKLKRYMTMMDSMTDE       KL   S  + +A          RRIQE
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRVARGSG------RRIQE 420

Query: 421 VMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQ 480
           VMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQ
Sbjct: 421 VMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQ 480

Query: 481 SLMKQMGSNKDMMGMFGGGDK 497
           SLMKQMGSNKDMMGMFGGGDK
Sbjct: 481 SLMKQMGSNKDMMGMFGGGDK 495

[Close]

BLAST of Csor.00g196940 vs. ExPASy TrEMBL
Match: A0A5A7TRJ6 (Signal recognition particle 54 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G002130 PE=3 SV=1)

HSP 1 Score: 908 bits (2347), Expect = 0.0
Identity = 469/497 (94.37%), Postives = 476/497 (95.77%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120
           NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSV+MFVGLQGSGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180
           YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIA EGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360
           SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQ+LLKMGPISQVFSMLPG SAEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQSLLKMGPISQVFSMLPGVSAEL 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDEGKQKLSICSAYLFLATSVSIEFDDCRRIQEVMEM 420
           MPKGREKESQAKLKRYMTMMDSMTDEG     + +     +  + I     RR+QEVMEM
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDEGYTNPKLINE----SRMMRIARGSGRRVQEVMEM 420

Query: 421 MEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMK 480
           MEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMK
Sbjct: 421 MEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMK 480

Query: 481 QMGSNKDMMGMFGGGDK 497
           QMGSNKDMMGMFGGGDK
Sbjct: 481 QMGSNKDMMGMFGGGDK 493

[Close]

BLAST of Csor.00g196940 vs. ExPASy TrEMBL
Match: A0A6J1GTY4 (Signal recognition particle 54 kDa protein OS=Cucurbita moschata OX=3662 GN=LOC111457512 PE=3 SV=1)

HSP 1 Score: 907 bits (2345), Expect = 0.0
Identity = 472/501 (94.21%), Postives = 476/501 (95.01%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120
           NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGK SV+MFVGLQGSGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKPSVVMFVGLQGSGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180
           YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360
           SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQ LLKMGPISQVFSMLPGFSAEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQKLLKMGPISQVFSMLPGFSAEL 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDE----GKQKLSICSAYLFLATSVSIEFDDCRRIQE 420
           MPKGREKESQAKLKRYMTMMDSMTDE       KL   S  + +A          RR+QE
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSG------RRVQE 420

Query: 421 VMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQ 480
           VMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQ
Sbjct: 421 VMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQ 480

Query: 481 SLMKQMGSNKDMMGMFGGGDK 497
           SLMKQMGSNKDMMGMFGGGDK
Sbjct: 481 SLMKQMGSNKDMMGMFGGGDK 495

[Close]

BLAST of Csor.00g196940 vs. ExPASy TrEMBL
Match: A0A1S3BY04 (Signal recognition particle 54 kDa protein OS=Cucumis melo OX=3656 GN=LOC103494661 PE=3 SV=1)

HSP 1 Score: 904 bits (2337), Expect = 0.0
Identity = 468/497 (94.16%), Postives = 475/497 (95.57%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120
           NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSV+MFVGLQGSGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180
           YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIA EGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360
           SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQ+LLKMGPISQVFSMLPG SAEL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQSLLKMGPISQVFSMLPGVSAEL 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDEGKQKLSICSAYLFLATSVSIEFDDCRRIQEVMEM 420
           MPKGREKESQAKLKRYMTMMDSMTDE     +     +  +  + I     RR+QEVMEM
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSTN--PKLINESRMMRIARGSGRRVQEVMEM 420

Query: 421 MEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMK 480
           MEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMK
Sbjct: 421 MEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMK 480

Query: 481 QMGSNKDMMGMFGGGDK 497
           QMGSNKDMMGMFGGGDK
Sbjct: 481 QMGSNKDMMGMFGGGDK 495

[Close]

BLAST of Csor.00g196940 vs. TAIR 10
Match: AT1G48900.1 (Signal recognition particle, SRP54 subunit protein )

HSP 1 Score: 828.2 bits (2138), Expect = 3.6e-240
Identity = 417/498 (83.73%), Postives = 461/498 (92.57%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLA+LGG I+RA+QQMSN T+IDEK LNECLNEITRALLQSDV F LV++MQ+NIKKIV
Sbjct: 1   MVLAELGGRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120
           NL+DLAAGHNKR+II+QA+F+ELCKMLDPGKP+F PKK K SV+MFVGLQG+GKTTTCTK
Sbjct: 61  NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180
           YAYYHQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPVKIA EGV+ FK
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KENCDLIIVDTSGRHKQEA+LFEEMRQV+EATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360
           SGF+DK+ EVVP DQQPELL+KLS+GNFTLRIMY+QFQN+L MGP+ +VFSMLPG SAE+
Sbjct: 301 SGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDQFQNILNMGPLKEVFSMLPGISAEM 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDEGKQKLSICSAYLF-LATSVSIEFDDCRRIQEVME 420
           MPKG EKESQAK+KRYMTMMDSMT++   +L   +  +F  +  + I     R+++EVME
Sbjct: 361 MPKGHEKESQAKIKRYMTMMDSMTND---ELDSSNPKVFNESRMMRIARGSGRQVREVME 420

Query: 421 MMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLM 480
           M+EEYKRLAK+WSKMKGLKIPK G+MSALSRNMNAQHMSKVLPPQ+LKQIGGMGGLQSLM
Sbjct: 421 MLEEYKRLAKIWSKMKGLKIPKNGDMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLM 480

Query: 481 KQMGSNKDMMGMFGGGDK 498
           KQMGS KDMMGMFGGGDK
Sbjct: 481 KQMGSGKDMMGMFGGGDK 495

[Close]

BLAST of Csor.00g196940 vs. TAIR 10
Match: AT1G15310.1 (signal recognition particle 54 kDa subunit )

HSP 1 Score: 715.3 bits (1845), Expect = 3.4e-206
Identity = 373/498 (74.90%), Postives = 427/498 (85.74%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLA+LGG I+RA+QQM+N T+IDEKVLN+ LNEITRALLQSDV F LV  MQTNIKKIV
Sbjct: 1   MVLAELGGRITRAIQQMNNVTIIDEKVLNDFLNEITRALLQSDVSFGLVEKMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120
           NLDDLAAGHNKR II+QA+F ELC+MLDPGKP+F PKK K SV+MFVGLQG+GKTTTCTK
Sbjct: 61  NLDDLAAGHNKRLIIEQAIFKELCRMLDPGKPAFAPKKAKPSVVMFVGLQGAGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180
           YAYYHQKKG+K ALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPVKIA EGV+RFK
Sbjct: 121 YAYYHQKKGYKAALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDRFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KE CDLIIVDTSGRHKQ A+LFEEMRQV+EAT+PDLVIFVMDSSIGQAAF+QA+AFK++V
Sbjct: 181 KEKCDLIIVDTSGRHKQAASLFEEMRQVAEATEPDLVIFVMDSSIGQAAFEQAEAFKETV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           +VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG GDW
Sbjct: 241 SVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGKGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360
           SG +DK+ EVVP D Q EL++ LS+GNFTLR MY+QFQ  L++ P++Q+FSMLPG SAE+
Sbjct: 301 SGLVDKLQEVVPKDLQNELVENLSQGNFTLRSMYDQFQCSLRI-PLNQLFSMLPGISAEM 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDEGKQKLSICSAYLFLATSV-SIEFDDCRRIQEVME 420
           MPKG  +ES+ K+KRYMTMMDSMT+   ++L   +  +F  + +  I     R ++EVME
Sbjct: 361 MPKGHGEESRVKMKRYMTMMDSMTN---KELDSPNPKIFNESRIMRIARGSGRLVREVME 420

Query: 421 MMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLM 480
           M+EEYKR+AK    MKG+KIPK G+            MSKV+PPQ+LKQ+GGM GLQSLM
Sbjct: 421 MLEEYKRIAKT---MKGIKIPKNGD------------MSKVIPPQMLKQMGGMSGLQSLM 479

Query: 481 KQMGSNKDMMGMFGGGDK 498
           KQMGS KDMMGMFGGG K
Sbjct: 481 KQMGSAKDMMGMFGGGGK 479

[Close]

BLAST of Csor.00g196940 vs. TAIR 10
Match: AT5G49500.1 (Signal recognition particle, SRP54 subunit protein )

HSP 1 Score: 713.4 bits (1840), Expect = 1.3e-205
Identity = 368/500 (73.60%), Postives = 425/500 (85.00%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLA+LGG I  A+Q+M+N T+IDEK LN+CLNEITRALLQSDV F LV++MQTNIKKIV
Sbjct: 1   MVLAELGGRIMSAIQKMNNVTIIDEKALNDCLNEITRALLQSDVSFPLVKEMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGS--GKTTTC 120
           NL+DLAAGHNKR+II+QA+F+ELCKMLDPGK +F PKK K SV+MFVGLQG    K    
Sbjct: 61  NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKSAFAPKKAKPSVVMFVGLQGEVLEKPQLV 120

Query: 121 TKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVER 180
                  ++KG+KPALVCADTFRAGAFDQLKQNATK+KIP+YGSY  SDPVKIA EGV+R
Sbjct: 121 PSMLIIIRRKGYKPALVCADTFRAGAFDQLKQNATKSKIPYYGSYTGSDPVKIAVEGVDR 180

Query: 181 FKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQ 240
           FKKENCDLIIVDTSGRHKQ+A+LFEEMRQ+SEATKPDLVIFVMDSSIGQ AF+QA+AFKQ
Sbjct: 181 FKKENCDLIIVDTSGRHKQQASLFEEMRQISEATKPDLVIFVMDSSIGQTAFEQARAFKQ 240

Query: 241 SVAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 300
           +VAVGAVI+TKMDGHAKGGG LSAVAATKSPVIFIGTGEHMDEFEVFD KPFVSRLLG G
Sbjct: 241 TVAVGAVIITKMDGHAKGGGTLSAVAATKSPVIFIGTGEHMDEFEVFDAKPFVSRLLGNG 300

Query: 301 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSA 360
           D SGF++K+ EVVP DQQPELL+ LS G FTLRIMY+QFQN+L MGP+ +VFSMLPG  A
Sbjct: 301 DMSGFVNKLQEVVPKDQQPELLEMLSHGKFTLRIMYDQFQNMLNMGPLKEVFSMLPGMRA 360

Query: 361 ELMPKGREKESQAKLKRYMTMMDSMTDEGKQKLSICSAYLFLATSV-SIEFDDCRRIQEV 420
           E+MP+G EKESQAK+KRYMTMMDSMT+E   +L   +  +F  + +  I     R ++EV
Sbjct: 361 EMMPEGHEKESQAKIKRYMTMMDSMTNE---ELDSSNPKVFNESRIMRIARGSGRIVREV 420

Query: 421 MEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQS 480
           MEM+EEYKRL  +W K+KGLK  +KG MSALS+N N+Q +SKVLP Q+LKQIGGM GLQS
Sbjct: 421 MEMLEEYKRLTTMWGKVKGLKNLEKGNMSALSKNKNSQQLSKVLPAQMLKQIGGMSGLQS 480

Query: 481 LMKQMGSNKDMMGMFGGGDK 498
           LMKQMGS KD+MGMFGG D+
Sbjct: 481 LMKQMGSGKDLMGMFGGRDE 497

[Close]

BLAST of Csor.00g196940 vs. TAIR 10
Match: AT1G48900.2 (Signal recognition particle, SRP54 subunit protein )

HSP 1 Score: 687.6 bits (1773), Expect = 7.6e-198
Identity = 345/421 (81.95%), Postives = 386/421 (91.69%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLA+LGG I+RA+QQMSN T+IDEK LNECLNEITRALLQSDV F LV++MQ+NIKKIV
Sbjct: 1   MVLAELGGRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120
           NL+DLAAGHNKR+II+QA+F+ELCKMLDPGKP+F PKK K SV+MFVGLQG+GKTTTCTK
Sbjct: 61  NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180
           YAYYHQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPVKIA EGV+ FK
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFK 180

Query: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KENCDLIIVDTSGRHKQEA+LFEEMRQV+EATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360
           SGF+DK+ EVVP DQQPELL+KLS+GNFTLRIMY+QFQN+L MGP+ +VFSMLPG SAE+
Sbjct: 301 SGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDQFQNILNMGPLKEVFSMLPGISAEM 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDEGKQKLSICSAYLF-LATSVSIEFDDCRRIQEVME 420
           MPKG EKESQAK+KRYMTMMDSMT++   +L   +  +F  +  + I     R+++EVME
Sbjct: 361 MPKGHEKESQAKIKRYMTMMDSMTND---ELDSSNPKVFNESRMMRIARGSGRQVREVME 418

[Close]

BLAST of Csor.00g196940 vs. TAIR 10
Match: AT5G03940.1 (chloroplast signal recognition particle 54 kDa subunit )

HSP 1 Score: 188.3 bits (477), Expect = 1.4e-47
Identity = 136/500 (27.20%), Postives = 241/500 (48.20%), Query Frame = 0


Query: 2   VLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIVN 61
           +  QL G +  A  ++    V+ +  + E + +I RALL++DV   +VR    ++     
Sbjct: 77  MFGQLTGGLEAAWSKLKGEEVLTKDNIAEPMRDIRRALLEADVSLPVVRRFVQSVSDQAV 136

Query: 62  LDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTKY 121
              +  G    + + + V +EL K++          K   +VI+  GLQG GKTT C K 
Sbjct: 137 GMGVIRGVKPDQQLVKIVHDELVKLMGGEVSELQFAKSGPTVILLAGLQGVGKTTVCAKL 196

Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFKK 181
           A Y +K+G    L+  D +R  A DQL     +  +P Y +  +  P  IA++G++  KK
Sbjct: 197 ACYLKKQGKSCMLIAGDVYRPAAIDQLVILGEQVGVPVYTAGTDVKPADIAKQGLKEAKK 256

Query: 182 ENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVA 241
            N D++I+DT+GR + +  + +E++ V +   P  V+ V+D+  GQ A      F   + 
Sbjct: 257 NNVDVVIMDTAGRLQIDKGMMDELKDVKKFLNPTEVLLVVDAMTGQEAAALVTTFNVEIG 316

Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
           +   I+TK+DG ++GG ALS    +  P+  +G GE M++ E F       R+LGMGD  
Sbjct: 317 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 376

Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAELM 361
            F++K  EV+  +   +L +K+    F      +Q + + KMG +++V  M+PG     +
Sbjct: 377 SFVEKATEVMRQEDAEDLQKKIMSAKFDFNDFLKQTRAVAKMGSMTRVLGMIPGMGK--V 436

Query: 362 PKGREKESQAKLKRYMTMMDSMTDEGKQKLSICSAYLFLATSVS----IEFDDCRRIQEV 421
              + +E++  L     M++ MT E +++  +      LA S      I  D  +  Q+V
Sbjct: 437 SPAQIREAEKNLLVMEAMIEVMTPEERERPEL------LAESPERRKRIAKDSGKTEQQV 496

Query: 422 MEMMEEYKRLAKVWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQ 481
             ++ +   + ++  KMK L  + + G + ALS   +A    +  PP   ++       +
Sbjct: 497 SALVAQ---IFQMRVKMKNLMGVMEGGSIPALSGLEDALKAEQKAPPGTARRKRKADSRK 556

Query: 482 SLMKQMGSNKDMMGMFGGGD 497
             ++   S     G FG G+
Sbjct: 557 KFVESASSKPGPRG-FGSGN 564

The following BLAST results are available for this feature:

BLAST of Csor.00g196940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P49972	7.5e-251	88.71	Signal recognition particle 54 kDa protein 2 OS=Solanum lycopersicum OX=4081 PE=...	[more]
P49967	5.0e-239	83.73	Signal recognition particle 54 kDa protein 3 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
P49971	1.2e-235	85.89	Signal recognition particle 54 kDa protein 1 OS=Solanum lycopersicum OX=4081 PE=...	[more]
P49969	1.3e-223	80.32	Signal recognition particle 54 kDa protein 2 OS=Hordeum vulgare OX=4513 GN=SRP54...	[more]
P49968	1.1e-222	80.12	Signal recognition particle 54 kDa protein 1 OS=Hordeum vulgare OX=4513 GN=SRP54...	[more]

BLAST of Csor.00g196940 vs. NCBI nr


Match Name	Identity	Description
KAG6606813.1	100.00	hypothetical protein SDJN03_00155, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022998349.1	95.01	signal recognition particle 54 kDa protein 2 [Cucurbita maxima]	[more]
XP_023523909.1	95.01	signal recognition particle 54 kDa protein 2 isoform X1 [Cucurbita pepo subsp. p...	[more]
XP_022948401.1	94.81	signal recognition particle 54 kDa protein 2-like [Cucurbita moschata]	[more]
KAA0044477.1	94.37	signal recognition particle 54 kDa protein 2 [Cucumis melo var. makuwa]	[more]

BLAST of Csor.00g196940 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1KE35	95.01	Signal recognition particle 54 kDa protein OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1G940	94.81	Signal recognition particle 54 kDa protein OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A5A7TRJ6	94.37	Signal recognition particle 54 kDa protein OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A6J1GTY4	94.21	Signal recognition particle 54 kDa protein OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A1S3BY04	94.16	Signal recognition particle 54 kDa protein OS=Cucumis melo OX=3656 GN=LOC1034946...	[more]

BLAST of Csor.00g196940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G48900.1	3.6e-240	83.73	Signal recognition particle, SRP54 subunit protein	[more]
AT1G15310.1	3.4e-206	74.90	signal recognition particle 54 kDa subunit	[more]
AT5G49500.1	1.3e-205	73.60	Signal recognition particle, SRP54 subunit protein	[more]
AT1G48900.2	7.6e-198	81.95	Signal recognition particle, SRP54 subunit protein	[more]
AT5G03940.1	1.4e-47	27.20	chloroplast signal recognition particle 54 kDa subunit	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013822	Signal recognition particle SRP54, helical bundle	SMART	SM00963	SRP54_N_2	coord: 2..87 e-value: 3.5E-13 score: 59.8
IPR013822	Signal recognition particle SRP54, helical bundle	PFAM	PF02881	SRP54_N	coord: 6..83 e-value: 2.5E-15 score: 56.4
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 100..277 e-value: 9.5E-6 score: 35.1
IPR000897	Signal recognition particle, SRP54 subunit, GTPase domain	SMART	SM00962	SRP54_3	coord: 101..296 e-value: 1.4E-95 score: 333.6
IPR000897	Signal recognition particle, SRP54 subunit, GTPase domain	PFAM	PF00448	SRP54	coord: 102..296 e-value: 1.8E-78 score: 262.7
IPR000897	Signal recognition particle, SRP54 subunit, GTPase domain	PROSITE	PS00300	SRP54	coord: 269..282
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 91..285 e-value: 3.7E-128 score: 428.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 95..298
IPR036891	Signal recognition particle, SRP54 subunit, M-domain superfamily	GENE3D	1.10.260.30		coord: 312..438 e-value: 1.7E-29 score: 104.5
IPR036891	Signal recognition particle, SRP54 subunit, M-domain superfamily	SUPERFAMILY	47446	Signal peptide-binding domain	coord: 298..435
IPR042101	Signal recognition particle SRP54, N-terminal domain superfamily	GENE3D	1.20.120.140		coord: 5..306 e-value: 3.7E-128 score: 428.6
IPR004125	Signal recognition particle, SRP54 subunit, M-domain	PFAM	PF02978	SRP_SPB	coord: 327..429 e-value: 6.6E-15 score: 55.6
IPR006325	Signal recognition particle, SRP54 subunit, eukaryotic	TIGRFAM	TIGR01425	TIGR01425	coord: 2..429 e-value: 1.3E-212 score: 704.2
None	No IPR available	PANTHER	PTHR11564:SF33	SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN	coord: 1..496
None	No IPR available	CDD	cd17875	SRP54_G	coord: 102..294 e-value: 3.74914E-141 score: 401.956
IPR022941	Signal recognition particle, SRP54 subunit	PANTHER	PTHR11564	SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54	coord: 1..496
IPR022941	Signal recognition particle, SRP54 subunit	HAMAP	MF_00306	SRP54	coord: 6..479 score: 33.252274
IPR036225	SRP/SRP receptor, N-terminal	SUPERFAMILY	47364	Domain of the SRP/SRP receptor G-proteins	coord: 1..94

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g196940.m01	Csor.00g196940.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006616	SRP-dependent cotranslational protein targeting to membrane, translocation
biological_process	GO:0006614	SRP-dependent cotranslational protein targeting to membrane
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005786	signal recognition particle, endoplasmic reticulum targeting
cellular_component	GO:0048500	signal recognition particle
molecular_function	GO:0008312	7S RNA binding
molecular_function	GO:0030942	endoplasmic reticulum signal peptide binding
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding