Csor.00g196810 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g196810
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	ethylene-responsive transcription factor ERF003-like
Location	Csor_Chr01: 777962 .. 778708 (-)
RNA-Seq Expression	Csor.00g196810
Synteny	Csor.00g196810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAGACCTCAACAGCGCTATCGAGGAGTCCGGCAAAGGCATTGGGGCTCTTGGGTCTCCGAGATTCGTCACCCTTTACTGTAACTCTTCTAATATCACTTCTCCTCTACTTTTGTACTATAAATTTTTAACTAATTAATGAACTAAATCGTTACTTTATTATTTTTAAATATCAAAATACGTTTCTTTAATAAATTATGATTTGAATTTTTTTTTTTTTTTTTTTTTTCTTTTTGTCTCTCCTTCAGGAAGACAAGGATATGGCTGGGAACTTTCGAAACGGCGGAAGACGCAGCCAGAGCATACGACGAAGCAGCCAGAATCATGTGTTGCCCTAACAATCTCCCAACCAATCACAACGCGCCACGTCACTCTTTGTCCGCGCCGCCGCCGTCCTCGAACCTTCTAACCCCGACATTGATCGAGAAGTTGCAGAAATGTCGAACGGCTTCTTTCCAAATGGTCAAAAAGCAATTCCCCAACAAAACCCACTTCTCCGACCGGAAATCCGCTCACCCAAGTCGCCGTCAGCCCACCAATTTCGACGACGGCTATGGTGCCTCCGGCGTTCACTTTCCGGAGACGGACTCCAAGTGGGTCGCCGGCGGTCAGGCTCAGGAGATCGCCCGGCTTGAAGATGATCACGTAGAGCAAATGATTCAAGAATTGCTTGATCTTGGGTCATTTGAGTTTTGCCCTAATAATAATAATTATCTTAATGATATTGAGCCTACAAATAATTAA

mRNA sequence

ATGGCAAGACCTCAACAGCGCTATCGAGGAGTCCGGCAAAGGCATTGGGGCTCTTGGGTCTCCGAGATTCGTCACCCTTTACTGAAGACAAGGATATGGCTGGGAACTTTCGAAACGGCGGAAGACGCAGCCAGAGCATACGACGAAGCAGCCAGAATCATGTGTTGCCCTAACAATCTCCCAACCAATCACAACGCGCCACGTCACTCTTTGTCCGCGCCGCCGCCGTCCTCGAACCTTCTAACCCCGACATTGATCGAGAAGTTGCAGAAATGTCGAACGGCTTCTTTCCAAATGGTCAAAAAGCAATTCCCCAACAAAACCCACTTCTCCGACCGGAAATCCGCTCACCCAAGTCGCCGTCAGCCCACCAATTTCGACGACGGCTATGGTGCCTCCGGCGTTCACTTTCCGGAGACGGACTCCAAGTGGGTCGCCGGCGGTCAGGCTCAGGAGATCGCCCGGCTTGAAGATGATCACGTAGAGCAAATGATTCAAGAATTGCTTGATCTTGGGTCATTTGAGTTTTGCCCTAATAATAATAATTATCTTAATGATATTGAGCCTACAAATAATTAA

Coding sequence (CDS)

ATGGCAAGACCTCAACAGCGCTATCGAGGAGTCCGGCAAAGGCATTGGGGCTCTTGGGTCTCCGAGATTCGTCACCCTTTACTGAAGACAAGGATATGGCTGGGAACTTTCGAAACGGCGGAAGACGCAGCCAGAGCATACGACGAAGCAGCCAGAATCATGTGTTGCCCTAACAATCTCCCAACCAATCACAACGCGCCACGTCACTCTTTGTCCGCGCCGCCGCCGTCCTCGAACCTTCTAACCCCGACATTGATCGAGAAGTTGCAGAAATGTCGAACGGCTTCTTTCCAAATGGTCAAAAAGCAATTCCCCAACAAAACCCACTTCTCCGACCGGAAATCCGCTCACCCAAGTCGCCGTCAGCCCACCAATTTCGACGACGGCTATGGTGCCTCCGGCGTTCACTTTCCGGAGACGGACTCCAAGTGGGTCGCCGGCGGTCAGGCTCAGGAGATCGCCCGGCTTGAAGATGATCACGTAGAGCAAATGATTCAAGAATTGCTTGATCTTGGGTCATTTGAGTTTTGCCCTAATAATAATAATTATCTTAATGATATTGAGCCTACAAATAATTAA

Protein sequence

MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNLPTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPSRRQPTNFDDGYGASGVHFPETDSKWVAGGQAQEIARLEDDHVEQMIQELLDLGSFEFCPNNNNYLNDIEPTNN

Homology

[Close]

BLAST of Csor.00g196810 vs. ExPASy Swiss-Prot
Match: Q94AW5 (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=1 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 4.9e-41
Identity = 103/188 (54.79%), Postives = 115/188 (61.17%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCP--- 60
           MARPQQR+RGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAAR+MC P   
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  NNLPTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKK-QFPNKTHFSDRKSA 120
            N P N NA       P  SS LL+ TL  KL KC  AS QM K+ Q   +T  +  +SA
Sbjct: 61  TNFPYNPNA------IPTSSSKLLSATLTAKLHKCYMASLQMTKQTQTQTQTQTARSQSA 120

Query: 121 HPSRRQPTNFDDGYGASGVHF-----PETDSKWVAG--GQAQEIARLEDDHVEQMIQELL 178
                      DG  A+  H        T+ KW  G     Q    LE+DH+EQMI+ELL
Sbjct: 121 D---------SDGVTANESHLNRGVTETTEIKWEDGNANMQQNFRPLEEDHIEQMIEELL 173

[Close]

BLAST of Csor.00g196810 vs. ExPASy Swiss-Prot
Match: P16146 (Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 4.6e-31
Identity = 87/178 (48.88%), Postives = 102/178 (57.30%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMC---CP 60
           MARPQQRYRG RQRHWGSWVSEIRH +LKTRIW GTFE+AEDAARAYDEAAR+MC     
Sbjct: 1   MARPQQRYRGFRQRHWGSWVSEIRHSILKTRIWQGTFESAEDAARAYDEAARLMCGTRAR 60

Query: 61  NNLPTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAH 120
            N P N NA + S      SS LL+ TLI KL +C  AS QM +   P+    + R  A 
Sbjct: 61  TNFPYNPNASQSS------SSKLLSATLIAKLHRCYMASLQMTR---PSSLPEAPRIIA- 120

Query: 121 PSRRQPTNFDDGYGASGVHFPE------------TDSKWVAGGQAQEIARLEDDHVEQ 164
                P N   G GA  +  P+             D K V    +Q+   LE+DH+ Q
Sbjct: 121 ----SPNNAVKGIGADAMLLPKKREQEEQETGGNLDFKKVKVECSQQFKPLEEDHIAQ 164

[Close]

BLAST of Csor.00g196810 vs. ExPASy Swiss-Prot
Match: Q9XI33 (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 5.3e-19
Identity = 75/200 (37.50%), Postives = 99/200 (49.50%), Query Frame = 0


Query: 6   QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPN---NLPT 65
           +++RGVRQRHWGSWV+EIRHPLLK RIWLGTFETAE+AARAYDEAA +M   N   N P 
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 66  NHN-----------APRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFS 125
           N+N               S  +   SS+ L+  L  KL+KC        K   P+ T   
Sbjct: 65  NNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKC-------CKSPSPSLTCLR 124

Query: 126 -DRKSAHP---SRRQPTNFDDGYGASGVHFPETDSKWVA-----------------GGQA 171
            D  S+H     +R  +  D  +  +    P + S+                    GG  
Sbjct: 125 LDTASSHIGVWQKRAGSKSDSSWVMTVELGPASSSQETTSKASQDAILAPTTEVEIGGSR 184

[Close]

BLAST of Csor.00g196810 vs. ExPASy Swiss-Prot
Match: Q9LFN7 (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702 GN=SHN2 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.9e-16
Identity = 50/93 (53.76%), Postives = 62/93 (66.67%), Query Frame = 0


Query: 6  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPN---NLPT 65
          +++RGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AARAYD+AA +M   N   N P 
Sbjct: 5  RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 66 --NHNAPRH--SLSAPPPSSNLLTPTLIEKLQK 92
            +     H   +++P  S   L+  L  KL+K
Sbjct: 65 VKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRK 97

[Close]

BLAST of Csor.00g196810 vs. ExPASy Swiss-Prot
Match: Q3E958 (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702 GN=SHN3 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.2e-15
Identity = 67/177 (37.85%), Postives = 91/177 (51.41%), Query Frame = 0


Query: 6   QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIM---CCPNNLPT 65
           +++RGVRQR WGSWVSEIRHPLLK R+WLGTF+TAE AARAYD+AA +M       N P 
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66  NHNAPRHSL--SAPPPSSNLLTPTLIEKLQK-CRTASFQMVKKQFPN-KTHFSDRKSAHP 125
             +   +SL  ++   S   L+  L  KL+K C+  +  +   +  N  +H    +    
Sbjct: 65  IKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAG 124

Query: 126 SRRQP-----TNFDDGYGASGVHFPETDSKWVAGGQAQEIARLEDDHVEQMIQELLD 171
           S+  P         D   A      ET+   V     QE    +D    QMI+ELL+
Sbjct: 125 SKTSPNWVKLVELGDKVNARPGGDIETNKMKVRNEDVQE----DDQMAMQMIEELLN 177

[Close]

BLAST of Csor.00g196810 vs. NCBI nr
Match: KAG6606826.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 399 bits (1025), Expect = 2.01e-140
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNL 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNL
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNL 60

Query: 61  PTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPSR 120
           PTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPSR
Sbjct: 61  PTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPSR 120

Query: 121 RQPTNFDDGYGASGVHFPETDSKWVAGGQAQEIARLEDDHVEQMIQELLDLGSFEFCPNN 180
           RQPTNFDDGYGASGVHFPETDSKWVAGGQAQEIARLEDDHVEQMIQELLDLGSFEFCPNN
Sbjct: 121 RQPTNFDDGYGASGVHFPETDSKWVAGGQAQEIARLEDDHVEQMIQELLDLGSFEFCPNN 180

Query: 181 NNYLNDIEPTNN 192
           NNYLNDIEPTNN
Sbjct: 181 NNYLNDIEPTNN 192

[Close]

BLAST of Csor.00g196810 vs. NCBI nr
Match: KAG7036532.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 396 bits (1017), Expect = 7.06e-139
Identity = 191/192 (99.48%), Postives = 191/192 (99.48%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNL 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNL
Sbjct: 22  MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNL 81

Query: 61  PTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPSR 120
           PTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPSR
Sbjct: 82  PTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPSR 141

Query: 121 RQPTNFDDGYGASGVHFPETDSKWVAGGQAQEIARLEDDHVEQMIQELLDLGSFEFCPNN 180
           RQPTNFDDGYGASGVHFPETDSKWVAGGQAQEIARLEDDHVEQMIQELLDLGSFEFCPNN
Sbjct: 142 RQPTNFDDGYGASGVHFPETDSKWVAGGQAQEIARLEDDHVEQMIQELLDLGSFEFCPNN 201

Query: 181 NNYLNDIEPTNN 192
           NNYLNDIE TNN
Sbjct: 202 NNYLNDIESTNN 213

[Close]

BLAST of Csor.00g196810 vs. NCBI nr
Match: XP_022949239.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita moschata])

HSP 1 Score: 395 bits (1014), Expect = 9.55e-139
Identity = 190/192 (98.96%), Postives = 191/192 (99.48%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNL 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNL
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNL 60

Query: 61  PTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPSR 120
           PTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPSR
Sbjct: 61  PTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPSR 120

Query: 121 RQPTNFDDGYGASGVHFPETDSKWVAGGQAQEIARLEDDHVEQMIQELLDLGSFEFCPNN 180
           RQPTNFDDGYGASGVHFPETDSKWVAGG+AQEIARLEDDHVEQMIQELLDLGSFEFCPNN
Sbjct: 121 RQPTNFDDGYGASGVHFPETDSKWVAGGEAQEIARLEDDHVEQMIQELLDLGSFEFCPNN 180

Query: 181 NNYLNDIEPTNN 192
           NNYLNDIE TNN
Sbjct: 181 NNYLNDIESTNN 192

[Close]

BLAST of Csor.00g196810 vs. NCBI nr
Match: XP_023525763.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 381 bits (979), Expect = 2.08e-133
Identity = 183/192 (95.31%), Postives = 187/192 (97.40%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNL 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNL
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNL 60

Query: 61  PTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPSR 120
           PTNHN+PRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPSR
Sbjct: 61  PTNHNSPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPSR 120

Query: 121 RQPTNFDDGYGASGVHFPETDSKWVAGGQAQEIARLEDDHVEQMIQELLDLGSFEFCPNN 180
             PTN +DGYGASGVH PETD+KWVAGG+AQEIARLEDDHVEQMIQELLDLGSFEFCPNN
Sbjct: 121 PHPTNLNDGYGASGVHLPETDAKWVAGGEAQEIARLEDDHVEQMIQELLDLGSFEFCPNN 180

Query: 181 NNYLNDIEPTNN 192
           NNYLNDIE TNN
Sbjct: 181 NNYLNDIESTNN 192

[Close]

BLAST of Csor.00g196810 vs. NCBI nr
Match: XP_022998174.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita maxima])

HSP 1 Score: 368 bits (945), Expect = 3.07e-128
Identity = 180/192 (93.75%), Postives = 184/192 (95.83%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNL 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNL
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNL 60

Query: 61  PTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPSR 120
           PTN NAP HSLSAPPPS NLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPSR
Sbjct: 61  PTNRNAPLHSLSAPPPS-NLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPSR 120

Query: 121 RQPTNFDDGYGASGVHFPETDSKWVAGGQAQEIARLEDDHVEQMIQELLDLGSFEFCPNN 180
            QPTN DD YG+SGVHFPETD+KWVAG +AQEIARLEDDHVEQMIQELLDLGSFEFCPNN
Sbjct: 121 PQPTNLDDAYGSSGVHFPETDAKWVAGEEAQEIARLEDDHVEQMIQELLDLGSFEFCPNN 180

Query: 181 NNYLNDIEPTNN 192
           NN+LNDIE TNN
Sbjct: 181 NNHLNDIESTNN 191

[Close]

BLAST of Csor.00g196810 vs. ExPASy TrEMBL
Match: A0A6J1GC95 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita moschata OX=3662 GN=LOC111452652 PE=4 SV=1)

HSP 1 Score: 395 bits (1014), Expect = 4.63e-139
Identity = 190/192 (98.96%), Postives = 191/192 (99.48%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNL 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNL
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNL 60

Query: 61  PTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPSR 120
           PTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPSR
Sbjct: 61  PTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPSR 120

Query: 121 RQPTNFDDGYGASGVHFPETDSKWVAGGQAQEIARLEDDHVEQMIQELLDLGSFEFCPNN 180
           RQPTNFDDGYGASGVHFPETDSKWVAGG+AQEIARLEDDHVEQMIQELLDLGSFEFCPNN
Sbjct: 121 RQPTNFDDGYGASGVHFPETDSKWVAGGEAQEIARLEDDHVEQMIQELLDLGSFEFCPNN 180

Query: 181 NNYLNDIEPTNN 192
           NNYLNDIE TNN
Sbjct: 181 NNYLNDIESTNN 192

[Close]

BLAST of Csor.00g196810 vs. ExPASy TrEMBL
Match: A0A6J1KDM8 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661 GN=LOC111492899 PE=4 SV=1)

HSP 1 Score: 368 bits (945), Expect = 1.49e-128
Identity = 180/192 (93.75%), Postives = 184/192 (95.83%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNL 60
           MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNL
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNL 60

Query: 61  PTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPSR 120
           PTN NAP HSLSAPPPS NLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPSR
Sbjct: 61  PTNRNAPLHSLSAPPPS-NLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPSR 120

Query: 121 RQPTNFDDGYGASGVHFPETDSKWVAGGQAQEIARLEDDHVEQMIQELLDLGSFEFCPNN 180
            QPTN DD YG+SGVHFPETD+KWVAG +AQEIARLEDDHVEQMIQELLDLGSFEFCPNN
Sbjct: 121 PQPTNLDDAYGSSGVHFPETDAKWVAGEEAQEIARLEDDHVEQMIQELLDLGSFEFCPNN 180

Query: 181 NNYLNDIEPTNN 192
           NN+LNDIE TNN
Sbjct: 181 NNHLNDIESTNN 191

[Close]

BLAST of Csor.00g196810 vs. ExPASy TrEMBL
Match: A0A1S3BY29 (ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=LOC103494684 PE=4 SV=1)

HSP 1 Score: 248 bits (633), Expect = 2.48e-81
Identity = 128/183 (69.95%), Postives = 143/183 (78.14%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCC-PNN 60
           M RPQQRYRGVRQRHWGSWVSEIRHP+LKTRIWLGTFETAEDAARAYDEAA IMCC PNN
Sbjct: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60

Query: 61  LPTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPS 120
           L TNH+AP H   A P SS LLTPTLIEKLQ+CR AS QM K QF      + RKSA P+
Sbjct: 61  LSTNHSAPHHPSPASP-SSKLLTPTLIEKLQRCRMASLQMTKAQF------AVRKSADPT 120

Query: 121 RRQPTNFDDGYGASGVHFPETDSKWVAGGQAQEIARLEDDHVEQMIQELLDLGSFEFCPN 180
           +   T  + G      H+PE +++WV+  + +E+ RLEDDHVEQMIQELLDLGSFEFCPN
Sbjct: 121 QSPATKLEGG------HWPEKEARWVSSREVEEVRRLEDDHVEQMIQELLDLGSFEFCPN 170

Query: 181 NNN 182
           NNN
Sbjct: 181 NNN 170

[Close]

BLAST of Csor.00g196810 vs. ExPASy TrEMBL
Match: A0A0A0KVJ4 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G006210 PE=4 SV=1)

HSP 1 Score: 243 bits (621), Expect = 2.32e-79
Identity = 130/193 (67.36%), Postives = 144/193 (74.61%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCC-PNN 60
           M RPQQRYRGVRQRHWGSWVSEIRHP+LKTRIWLGTFETAEDAARAYDEAA IMCC PNN
Sbjct: 1   MGRPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAATIMCCTPNN 60

Query: 61  LPTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAHPS 120
           L TNH+A  H  SAP  SS LLTPT IEKLQ+CR AS QM K QF      + RKSA P+
Sbjct: 61  LSTNHSASHHPSSAPL-SSKLLTPTSIEKLQRCRMASLQMTKAQF------AVRKSADPT 120

Query: 121 RRQPTNFDDGYGASGVHFPETDSKWVAGGQAQEIARLEDDHVEQMIQELLDLGSFEFCPN 180
           +   T  D G      H+PE  ++WV   + +E+ RLED+HVEQMIQELLDLGSFEFCPN
Sbjct: 121 QSPATKLDGG------HWPEKAARWVPSREVEEVRRLEDEHVEQMIQELLDLGSFEFCPN 180

Query: 181 NNNYLNDIEPTNN 192
           NNN  +    TNN
Sbjct: 181 NNNNHHHFGSTNN 180

[Close]

BLAST of Csor.00g196810 vs. ExPASy TrEMBL
Match: A0A6J1DIX5 (ethylene-responsive transcription factor ERF003-like OS=Momordica charantia OX=3673 GN=LOC111020953 PE=4 SV=1)

HSP 1 Score: 243 bits (619), Expect = 3.24e-79
Identity = 132/184 (71.74%), Postives = 139/184 (75.54%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNL 60
           MARPQ +YRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNL
Sbjct: 1   MARPQHKYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPNNL 60

Query: 61  PTNHNAP-RHSLSAPP--PSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFSDRKSAH 120
            +NHNAP ++S SA    P S LLTPTLI+KL+KCR ASFQM KK+ P KTH SDR    
Sbjct: 61  SSNHNAPPQYSSSASTLGPVSKLLTPTLIDKLEKCRMASFQMAKKKLPTKTHLSDR---- 120

Query: 121 PSRRQPTNFDDGYGASGVHFPETDSKWVAGGQAQEIARLEDDHVEQMIQELLDLGSFEFC 180
            SRR     D G    GV  PET          QE  RLEDDHVEQMIQELLDLGSF FC
Sbjct: 121 -SRRPAAKLDGG----GVQSPET----------QEFHRLEDDHVEQMIQELLDLGSFHFC 165

[Close]

BLAST of Csor.00g196810 vs. TAIR 10
Match: AT5G25190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 169.1 bits (427), Expect = 3.5e-42
Identity = 103/188 (54.79%), Postives = 115/188 (61.17%), Query Frame = 0


Query: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCP--- 60
           MARPQQR+RGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAAR+MC P   
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  NNLPTNHNAPRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKK-QFPNKTHFSDRKSA 120
            N P N NA       P  SS LL+ TL  KL KC  AS QM K+ Q   +T  +  +SA
Sbjct: 61  TNFPYNPNA------IPTSSSKLLSATLTAKLHKCYMASLQMTKQTQTQTQTQTARSQSA 120

Query: 121 HPSRRQPTNFDDGYGASGVHF-----PETDSKWVAG--GQAQEIARLEDDHVEQMIQELL 178
                      DG  A+  H        T+ KW  G     Q    LE+DH+EQMI+ELL
Sbjct: 121 D---------SDGVTANESHLNRGVTETTEIKWEDGNANMQQNFRPLEEDHIEQMIEELL 173

[Close]

BLAST of Csor.00g196810 vs. TAIR 10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 95.9 bits (237), Expect = 3.8e-20
Identity = 75/200 (37.50%), Postives = 99/200 (49.50%), Query Frame = 0


Query: 6   QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPN---NLPT 65
           +++RGVRQRHWGSWV+EIRHPLLK RIWLGTFETAE+AARAYDEAA +M   N   N P 
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 66  NHN-----------APRHSLSAPPPSSNLLTPTLIEKLQKCRTASFQMVKKQFPNKTHFS 125
           N+N               S  +   SS+ L+  L  KL+KC        K   P+ T   
Sbjct: 65  NNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKC-------CKSPSPSLTCLR 124

Query: 126 -DRKSAHP---SRRQPTNFDDGYGASGVHFPETDSKWVA-----------------GGQA 171
            D  S+H     +R  +  D  +  +    P + S+                    GG  
Sbjct: 125 LDTASSHIGVWQKRAGSKSDSSWVMTVELGPASSSQETTSKASQDAILAPTTEVEIGGSR 184

[Close]

BLAST of Csor.00g196810 vs. TAIR 10
Match: AT5G11190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 87.4 bits (215), Expect = 1.3e-17
Identity = 50/93 (53.76%), Postives = 62/93 (66.67%), Query Frame = 0


Query: 6  QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIMCCPN---NLPT 65
          +++RGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AARAYD+AA +M   N   N P 
Sbjct: 5  RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 66 --NHNAPRH--SLSAPPPSSNLLTPTLIEKLQK 92
            +     H   +++P  S   L+  L  KL+K
Sbjct: 65 VKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRK 97

[Close]

BLAST of Csor.00g196810 vs. TAIR 10
Match: AT5G25390.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 84.7 bits (208), Expect = 8.7e-17
Identity = 67/177 (37.85%), Postives = 91/177 (51.41%), Query Frame = 0


Query: 6   QRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIM---CCPNNLPT 65
           +++RGVRQR WGSWVSEIRHPLLK R+WLGTF+TAE AARAYD+AA +M       N P 
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66  NHNAPRHSL--SAPPPSSNLLTPTLIEKLQK-CRTASFQMVKKQFPN-KTHFSDRKSAHP 125
             +   +SL  ++   S   L+  L  KL+K C+  +  +   +  N  +H    +    
Sbjct: 65  IKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAG 124

Query: 126 SRRQP-----TNFDDGYGASGVHFPETDSKWVAGGQAQEIARLEDDHVEQMIQELLD 171
           S+  P         D   A      ET+   V     QE    +D    QMI+ELL+
Sbjct: 125 SKTSPNWVKLVELGDKVNARPGGDIETNKMKVRNEDVQE----DDQMAMQMIEELLN 177

[Close]

BLAST of Csor.00g196810 vs. TAIR 10
Match: AT4G13620.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 80.9 bits (198), Expect = 1.3e-15
Identity = 36/51 (70.59%), Postives = 41/51 (80.39%), Query Frame = 0


Query: 4   PQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARIM 55
           P + YRGVRQRHWG WV+EIR P  +TR+WLGTFETAE AA AYD AA I+
Sbjct: 228 PTKLYRGVRQRHWGKWVAEIRLPRNRTRVWLGTFETAEQAAMAYDTAAYIL 278

The following BLAST results are available for this feature:

BLAST of Csor.00g196810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AW5	4.9e-41	54.79	Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 ...	[more]
P16146	4.6e-31	48.88	Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1	[more]
Q9XI33	5.3e-19	37.50	Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9LFN7	1.9e-16	53.76	Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702...	[more]
Q3E958	1.2e-15	37.85	Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of Csor.00g196810 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6606826.1	2.01e-140	100.00	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
KAG7036532.1	7.06e-139	99.48	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
XP_022949239.1	9.55e-139	98.96	ethylene-responsive transcription factor ERF003-like [Cucurbita moschata]	[more]
XP_023525763.1	2.08e-133	95.31	ethylene-responsive transcription factor ERF003-like [Cucurbita pepo subsp. pepo...	[more]
XP_022998174.1	3.07e-128	93.75	ethylene-responsive transcription factor ERF003-like [Cucurbita maxima]	[more]

BLAST of Csor.00g196810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GC95	4.63e-139	98.96	ethylene-responsive transcription factor ERF003-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1KDM8	1.49e-128	93.75	ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661...	[more]
A0A1S3BY29	2.48e-81	69.95	ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A0A0KVJ4	2.32e-79	67.36	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G006210 PE=...	[more]
A0A6J1DIX5	3.24e-79	71.74	ethylene-responsive transcription factor ERF003-like OS=Momordica charantia OX=3...	[more]

BLAST of Csor.00g196810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25190.1	3.5e-42	54.79	Integrase-type DNA-binding superfamily protein	[more]
AT1G15360.1	3.8e-20	37.50	Integrase-type DNA-binding superfamily protein	[more]
AT5G11190.1	1.3e-17	53.76	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.2	8.7e-17	37.85	Integrase-type DNA-binding superfamily protein	[more]
AT4G13620.1	1.3e-15	70.59	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 30..46 score: 70.91 coord: 8..19 score: 66.97
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 7..67 e-value: 1.5E-29 score: 114.2
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 7..52 e-value: 3.4E-11 score: 43.2
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 7..67 score: 18.91345
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 6..55 e-value: 2.3324E-28 score: 98.883
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 6..66 e-value: 4.1E-21 score: 76.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..127
None	No IPR available	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 1..178
None	No IPR available	PANTHER	PTHR31194:SF48	ETHYLENE RESPONSE FACTOR	coord: 1..178
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 7..56

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g196810.m01	Csor.00g196810.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity