Csor.00g196270 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g196270
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr01: 1063144 .. 1063413 (-)
RNA-Seq ExpressionCsor.00g196270
SyntenyCsor.00g196270
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCGGCGAGAGTCCCTCAGTACGCCTAGCATCTACCTGGAAATTCATGGAGAAACTGGTTCCTCGACCTCTGCGAGAAGCATCGGGAGCGCCAGTTATGGAAGAAACCTCCATACTTGTTCAGATTACTAAACTTTTCGTCATCGGGACTCAATTAGCGATGCCTCAGCTTGACCGGAGGCGGCGGTGGAGGGAAGGAAGGAAGAGGTATCTGGAACTAGAAGACTACTCCCTCTCCCCTGCTATTTTAGGGCTCCGAGATATTTAA

mRNA sequence

ATGATCGGCGAGAGTCCCTCAGTACGCCTAGCATCTACCTGGAAATTCATGGAGAAACTGGTTCCTCGACCTCTGCGAGAAGCATCGGGAGCGCCAGTTATGGAAGAAACCTCCATACTTGTTCAGATTACTAAACTTTTCGTCATCGGGACTCAATTAGCGATGCCTCAGCTTGACCGGAGGCGGCGGTGGAGGGAAGGAAGGAAGAGGTATCTGGAACTAGAAGACTACTCCCTCTCCCCTGCTATTTTAGGGCTCCGAGATATTTAA

Coding sequence (CDS)

ATGATCGGCGAGAGTCCCTCAGTACGCCTAGCATCTACCTGGAAATTCATGGAGAAACTGGTTCCTCGACCTCTGCGAGAAGCATCGGGAGCGCCAGTTATGGAAGAAACCTCCATACTTGTTCAGATTACTAAACTTTTCGTCATCGGGACTCAATTAGCGATGCCTCAGCTTGACCGGAGGCGGCGGTGGAGGGAAGGAAGGAAGAGGTATCTGGAACTAGAAGACTACTCCCTCTCCCCTGCTATTTTAGGGCTCCGAGATATTTAA

Protein sequence

MIGESPSVRLASTWKFMEKLVPRPLREASGAPVMEETSILVQITKLFVIGTQLAMPQLDRRRRWREGRKRYLELEDYSLSPAILGLRDI
Homology
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BLAST of Csor.00g196270 vs. NCBI nr
Match: KAG6606880.1 (hypothetical protein SDJN03_00222, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 177 bits (449), Expect = 6.50e-56
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0 

Query: 1  MIGESPSVRLASTWKFMEKLVPRPLREASGAPVMEETSILVQITKLFVIGTQLAMPQLDR 60
          MIGESPSVRLASTWKFMEKLVPRPLREASGAPVMEETSILVQITKLFVIGTQLAMPQLDR
Sbjct: 1  MIGESPSVRLASTWKFMEKLVPRPLREASGAPVMEETSILVQITKLFVIGTQLAMPQLDR 60

Query: 61 RRRWREGRKRYLELEDYSLSPAILGLRDI 89
          RRRWREGRKRYLELEDYSLSPAILGLRDI
Sbjct: 61 RRRWREGRKRYLELEDYSLSPAILGLRDI 89

The following BLAST results are available for this feature:
BLAST of Csor.00g196270 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g196270 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6606880.16.50e-56100.00hypothetical protein SDJN03_00222, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g196270 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g196270 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g196270.m01Csor.00g196270.m01mRNA