Csor.00g195830 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAATCAATCCATGCATTGGGCTTCTCCCACTCTCTTCAATTTTCCCAATCCCATTTCCATCCCAACCCCAAAAATTCTCTGCTAAGAACACTCGCCAGCCATGGAAGCAACAGGAAGGCTAGAACAAGCCTCAGTCTCAGAACATCTTGGCCCTCCATTTCCATTGCCCTATTTGGTTCAGGCTTTCTCTTAGGTCCTCTTCTCGATGGTCTCCATTCTCGGGTGAATCTCGTCGTTTATCAAATAGGATCCGTCGATATCGGCCCACTCCGCACTAACATTTGGGTAAGATTTTCGAATCGCGATTGTAGAACCCTATGATTCGTGAATTGCCACTAATTTTTAGGGCAACTGATGGTTTTACGAGCGATTTTGAATCTGAATGCTGCTCTAGGTTCCTTTCTTGCTGGGAGTATTTTACTGTACTGTTGGATTGATTCAACTCTACATAGATGAGAATTTTTCGCCGAACAGACCGGAAGGGAGTTTGGGCAAGACAGTAGCATCCTTAATGTGAGCTTTTTTTTTTTTTTTGTTTGTATTAGATTTTTTAGGGAGTGAAAATGATCTATTACAAGCGATTTTCATATAATTAGTATTCTAATATGTATTGTTTGTTACTGTTTGATCAGAGCATTGGCTTTGTTTATTGAATTGAGTGCTGAAATGTACAAAGCTGGAGTGGCTCCCAACATTGAGGCATATGCATTGTTTGCTGGGGCTGAGTTTATATGGGCATTGCTTGATAGTTCATTGCTTGGCTTCTCACTGGCTTGTGTTGTTGGCCTTCTCTGCCCTCTGGCTGAGATTCCCATTATGAAGTATGTGAACGACCCTCTTTCAATTCACCTACAAGTAGTTTATGATATTTGTTGGTTCTTGTACATTTTTATGTGATGATTTAGTTCCTATATATTTAGAAATGCAGAGATTAATTCTGTATTGTGAGAAGTTTAGTTGTTAGTGAGGCATACGAATGACTAAATACTTGGACTACTTTTGAGTTTGGATTGTAAGGAGGTGTATATCTACTTTATTCACTTGACCCAACTTCAAGTACGTTAGTTGCTACTTGAAGAGATTCCTACGAAATTTTGAATGTCAAGAACTTAATTGTTATATTTGTAAAAATATTAGGACGAAATTGTTTTAGAGCAAAACATGAGTGCCAACAACGTTAGAAGAGGCTTAAGATGAGAAAGGAAATGTTATCAGAGGTAAACTTTATTGTAATTAAAACCCTTGTTACAAGGAGCGAGGTTAGCCTTTTTGAGATCCTACATTAGTTAGAGAGGGGAACGAAGCATTTCTTATAAGAGTGTGGAAACATCTCCCTAGCAAACACGTTTTAAAACTGTGAGGCTGACGACGATACGTAACGAGCCAAAGTGGACAATATTTGCTAGCGATGGGCTTGGGTTGTTACAAATAGTATAAGAGCCAGAGCCAGACATCAGGTGTTGTGCCAGCGAGGACGCTAGGTCTCCAAGAGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGGAAACAAAACATTTCTTATAAGGGTGTGAAAATCTCACCCTAGCAGACGCGTTTTAAAACCATGAGGTTGACGGCGATATGTAACGAGTCAAAACGGACAATATTTGCTAGTAGTGAGCTTAGGCTGTTATAGCCTTAGGATGGACGAAGTCTCCCCAAAAGATTAGTAGGGTGGATCGGGAGCATGGTACAAGGAGCCAAGTCATGTGATACCTTGATTACAAAAAATATGAAGATTTCATCATTAGTTAGATGCAGTTAGTACATTTCTTCTCAAACTAAAAGGAAAAAACTTGAGATGATGTGATGTTCTTGGCAACTTAAAGGTGATTCAAAAGATGCCTCACTTTTATAAAAGAATATCCAATATTTTATGACTAATCTGATGAGCTGCCGTTCCTTTGAGCCGCAACTGATTTCATCATAGAAGCAAAAGATGGTTTACAGAGAATCCCTTAGATGATCAAATGACATTCGATTCGTAAACAATTTTTTTTTACTTCGATTCTGTTTTAGCTAACGAAATGCTACTCTACTCCTTGATCTAATGCTTATACAGGTTCTTCCATCTCTGGTATTATCCACAAGCGAATGTCGAGATCTTTGGTGAGGTAAGTGATGAAGGCACATATCAGCAAGTGATGGGAAATTCATGGAGTTTTATTTCCTGGAAAGTTTTAAAGCTTGCTTTTGTTCAATGCAGGGGCTAATCAGCTGGACAATCACATGCTATTTTGTTTACACTCCATTCTTGATTAATTTATCGAGGTGGCTCAAGTCTGTGTTGGATTCTGCTGCTGTAAAAAAGGATGGGTCTGCTTAATCAAATGTTTTTCTGCCTAATAGATTGGAAGGTTGGAGCTGGGAAGGTAAATAATTAATTTTGATGACTTGTCATTTTTATTTCTGTTTGAAGATTATTTTCTGTTTTTATAGGAAAAATTCATTAAATTGAATATAAATTCAAATTTGAATTTGAGTAGGATAGTAGTGTTAGGAATTACGACTCTCTACAATAGTATGATATTGTCCACTTTGAGCCTAATCTCTCGTAGCTTTGCCTTGGGCTTCCCCAAAAGGTCTCATACCAATGGAGATGTATTTCCTTACTTTATAAACCCACTATCATTCCCTAAATTAGCCAAGACTCCTTCAAACGGCCTCATACCAATGGAGATGTATTTCCTTACTTTATAAACCCACTATCATTCCCTAAATTAGCCAAGACTCCTTCAAACGGCCTCATACCAATGGAGATGTATTTCCTTACTTTATAAACCCATGATCATTCCCTAAATTAGCCAAGACTCCTTCCCAACAATTCTCAATAATTTTCCCTCAAACAAACTATACTATAGAGCCTCCCCTTAATCGAGGCTCGACTCCTTCTCTGAAGCCCTCAAACAAAGTACAACCTTTGTTCGATACTTTAGTCACTTTTGATTACACCTTTGAGGTTCACAATTCTTTGTTCGACATTTGAGGATTCTATTGACATGACTAAGTTTAGAGCATGACTTTGATACCATGTTAGGAATCACGATTCTCTACTATAGTATGATATTGTCCACTTTGAACCTAAATCCTCATACCAATGGAGATGTATTTCCTTACTTATAAACCCATGATCATTCCCTAAATTAGGCAATGTGGGACTCCCTCCCAACAATCCTCTAACAAGTAGGAGACAATAAACTTCTAATTTCATGGCCGTTAATTTCAATCAAAAGTTTAAGAAGTAATTAAACTGGAAATTTAGGGACTTATTAGACATTTTGTAAAATTTAGAGACCTATTTGACACACATCTTTGCAGTATAACTTCATTTGTACGATGCTTTATATTCAAAATCCAAATGCAAAGACTCTACGACGGAAGAATGTGTATTATAAACAACCAATTTGACTTGCCCACCATTAAGATTCTAGGGTTTTGTGAGAGGCCTAAATAAATGCCCAACCATTGTTGTTCATTCACATGCACCATTTTCTGAAACGAACTCCCAAATCTTATCTTCTTGGGTAATAGTACTTCACTCAAATGGCTTGGGGCAATTAATATTATTAGCTCATGTGCAGTTACAGGCCATTTTCATACAAAAATAGCTACTCTCTTCATTGCCTTTCTGTTCTGCGTCCTTTTTGTTCCTTTTATATTGGTTTGATTCAGAATCAAGCAAGTGGGTGTGA ATGCAATCAATCCATGCATTGGGCTTCTCCCACTCTCTTCAATTTTCCCAATCCCATTTCCATCCCAACCCCAAAAATTCTCTGCTAAGAACACTCGCCAGCCATGGAAGCAACAGGAAGGCTAGAACAAGCCTCAGTCTCAGAACATCTTGGCCCTCCATTTCCATTGCCCTATTTGGTTCAGGCTTTCTCTTAGGTCCTCTTCTCGATGGTCTCCATTCTCGGGTGAATCTCGTCGTTTATCAAATAGGATCCGTCGATATCGGCCCACTCCGCACTAACATTTGGGTTCCTTTCTTGCTGGGAGTATTTTACTGTACTGTTGGATTGATTCAACTCTACATAGATGAGAATTTTTCGCCGAACAGACCGGAAGGGAGTTTGGGCAAGACAGTAGCATCCTTAATAGCATTGGCTTTGTTTATTGAATTGAGTGCTGAAATGTACAAAGCTGGAGTGGCTCCCAACATTGAGGCATATGCATTGTTTGCTGGGGCTGAGTTTATATGGGCATTGCTTGATAGTTCATTGCTTGGCTTCTCACTGGCTTGTGTTGTTGGCCTTCTCTGCCCTCTGGCTGAGATTCCCATTATGAAGTTCTTCCATCTCTGGTATTATCCACAAGCGAATGTCGAGATCTTTGGTGAGGGGCTAATCAGCTGGACAATCACATGCTATTTTGTTTACACTCCATTCTTGATTAATTTATCGAGATTGGAAGGTTGGAGCTGGGAAGAATCAAGCAAGTGGGTGTGA ATGCAATCAATCCATGCATTGGGCTTCTCCCACTCTCTTCAATTTTCCCAATCCCATTTCCATCCCAACCCCAAAAATTCTCTGCTAAGAACACTCGCCAGCCATGGAAGCAACAGGAAGGCTAGAACAAGCCTCAGTCTCAGAACATCTTGGCCCTCCATTTCCATTGCCCTATTTGGTTCAGGCTTTCTCTTAGGTCCTCTTCTCGATGGTCTCCATTCTCGGGTGAATCTCGTCGTTTATCAAATAGGATCCGTCGATATCGGCCCACTCCGCACTAACATTTGGGTTCCTTTCTTGCTGGGAGTATTTTACTGTACTGTTGGATTGATTCAACTCTACATAGATGAGAATTTTTCGCCGAACAGACCGGAAGGGAGTTTGGGCAAGACAGTAGCATCCTTAATAGCATTGGCTTTGTTTATTGAATTGAGTGCTGAAATGTACAAAGCTGGAGTGGCTCCCAACATTGAGGCATATGCATTGTTTGCTGGGGCTGAGTTTATATGGGCATTGCTTGATAGTTCATTGCTTGGCTTCTCACTGGCTTGTGTTGTTGGCCTTCTCTGCCCTCTGGCTGAGATTCCCATTATGAAGTTCTTCCATCTCTGGTATTATCCACAAGCGAATGTCGAGATCTTTGGTGAGGGGCTAATCAGCTGGACAATCACATGCTATTTTGTTTACACTCCATTCTTGATTAATTTATCGAGATTGGAAGGTTGGAGCTGGGAAGAATCAAGCAAGTGGGTGTGA MQSIHALGFSHSLQFSQSHFHPNPKNSLLRTLASHGSNRKARTSLSLRTSWPSISIALFGSGFLLGPLLDGLHSRVNLVVYQIGSVDIGPLRTNIWVPFLLGVFYCTVGLIQLYIDENFSPNRPEGSLGKTVASLIALALFIELSAEMYKAGVAPNIEAYALFAGAEFIWALLDSSLLGFSLACVVGLLCPLAEIPIMKFFHLWYYPQANVEIFGEGLISWTITCYFVYTPFLINLSRLEGWSWEESSKWV Homology
BLAST of Csor.00g195830 vs. NCBI nr
Match: KAG6606923.1 (hypothetical protein SDJN03_00265, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 511 bits (1317), Expect = 5.63e-183 Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0
BLAST of Csor.00g195830 vs. NCBI nr
Match: KAG7036627.1 (hypothetical protein SDJN02_00246 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 481 bits (1237), Expect = 1.03e-170 Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0
BLAST of Csor.00g195830 vs. NCBI nr
Match: XP_022949544.1 (uncharacterized protein LOC111452860 [Cucurbita moschata] >XP_022949545.1 uncharacterized protein LOC111452860 [Cucurbita moschata] >XP_022949546.1 uncharacterized protein LOC111452860 [Cucurbita moschata]) HSP 1 Score: 479 bits (1234), Expect = 2.94e-170 Identity = 237/238 (99.58%), Postives = 238/238 (100.00%), Query Frame = 0
BLAST of Csor.00g195830 vs. NCBI nr
Match: XP_022998487.1 (uncharacterized protein LOC111493103 [Cucurbita maxima] >XP_022998488.1 uncharacterized protein LOC111493103 [Cucurbita maxima]) HSP 1 Score: 467 bits (1201), Expect = 3.27e-165 Identity = 231/238 (97.06%), Postives = 235/238 (98.74%), Query Frame = 0
BLAST of Csor.00g195830 vs. NCBI nr
Match: XP_023524606.1 (uncharacterized protein LOC111788502 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 450 bits (1158), Expect = 2.24e-156 Identity = 224/229 (97.82%), Postives = 226/229 (98.69%), Query Frame = 0
BLAST of Csor.00g195830 vs. ExPASy TrEMBL
Match: A0A6J1GD48 (uncharacterized protein LOC111452860 OS=Cucurbita moschata OX=3662 GN=LOC111452860 PE=4 SV=1) HSP 1 Score: 479 bits (1234), Expect = 1.42e-170 Identity = 237/238 (99.58%), Postives = 238/238 (100.00%), Query Frame = 0
BLAST of Csor.00g195830 vs. ExPASy TrEMBL
Match: A0A6J1KGW6 (uncharacterized protein LOC111493103 OS=Cucurbita maxima OX=3661 GN=LOC111493103 PE=4 SV=1) HSP 1 Score: 467 bits (1201), Expect = 1.58e-165 Identity = 231/238 (97.06%), Postives = 235/238 (98.74%), Query Frame = 0
BLAST of Csor.00g195830 vs. ExPASy TrEMBL
Match: A0A1S3BI47 (uncharacterized protein LOC103489906 OS=Cucumis melo OX=3656 GN=LOC103489906 PE=4 SV=1) HSP 1 Score: 388 bits (996), Expect = 3.45e-134 Identity = 197/243 (81.07%), Postives = 214/243 (88.07%), Query Frame = 0
BLAST of Csor.00g195830 vs. ExPASy TrEMBL
Match: A0A6J1DRY1 (uncharacterized protein LOC111023831 OS=Momordica charantia OX=3673 GN=LOC111023831 PE=4 SV=1) HSP 1 Score: 385 bits (989), Expect = 2.92e-133 Identity = 197/238 (82.77%), Postives = 208/238 (87.39%), Query Frame = 0
BLAST of Csor.00g195830 vs. ExPASy TrEMBL
Match: A0A0A0LBT1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G535110 PE=4 SV=1) HSP 1 Score: 384 bits (986), Expect = 9.30e-133 Identity = 192/240 (80.00%), Postives = 211/240 (87.92%), Query Frame = 0
BLAST of Csor.00g195830 vs. TAIR 10
Match: AT4G01935.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 37 Blast hits to 37 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). ) HSP 1 Score: 287.7 bits (735), Expect = 8.8e-78 Identity = 141/228 (61.84%), Postives = 177/228 (77.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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