Csor.00g195600 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g195600
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Protein of unknown function (DUF3511)
Location	Csor_Chr01: 1434356 .. 1434658 (-)
RNA-Seq Expression	Csor.00g195600
Synteny	Csor.00g195600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCATTTCCAATCGGCTCACGGCGGCGGACGAAGCGTCGAGATTGTCAGCGGCAAACGCTACGGAGGAGACGGCAGCTGTCAGATCTACGGCTCGCCGAATCTGGCTACAACTACGAACCGGGTTGGGCCGGCAGCAGCTGCGGCGAAACCGTGGCGGTTCGGCGACCCGGAGGGTAAACGGAGGAAGAGGATCGCCAAGTATAAAGTTTATACGGTCGAAGGGAAGGTGAAGGATTCGCTGCGGAAGGGACTACAGTGGATTAAGACCAAATGCTCCCGGATCGTCCATGGATATTGA

mRNA sequence

ATGGCCCATTTCCAATCGGCTCACGGCGGCGGACGAAGCGTCGAGATTGTCAGCGGCAAACGCTACGGAGGAGACGGCAGCTGTCAGATCTACGGCTCGCCGAATCTGGCTACAACTACGAACCGGGTTGGGCCGGCAGCAGCTGCGGCGAAACCGTGGCGGTTCGGCGACCCGGAGGGTAAACGGAGGAAGAGGATCGCCAAGTATAAAGTTTATACGGTCGAAGGGAAGGTGAAGGATTCGCTGCGGAAGGGACTACAGTGGATTAAGACCAAATGCTCCCGGATCGTCCATGGATATTGA

Coding sequence (CDS)

ATGGCCCATTTCCAATCGGCTCACGGCGGCGGACGAAGCGTCGAGATTGTCAGCGGCAAACGCTACGGAGGAGACGGCAGCTGTCAGATCTACGGCTCGCCGAATCTGGCTACAACTACGAACCGGGTTGGGCCGGCAGCAGCTGCGGCGAAACCGTGGCGGTTCGGCGACCCGGAGGGTAAACGGAGGAAGAGGATCGCCAAGTATAAAGTTTATACGGTCGAAGGGAAGGTGAAGGATTCGCTGCGGAAGGGACTACAGTGGATTAAGACCAAATGCTCCCGGATCGTCCATGGATATTGA

Protein sequence

MAHFQSAHGGGRSVEIVSGKRYGGDGSCQIYGSPNLATTTNRVGPAAAAAKPWRFGDPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY

Homology

[Close]

BLAST of Csor.00g195600 vs. NCBI nr
Match: XP_022949041.1 (uncharacterized protein LOC111452504 [Cucurbita moschata] >KAG6606946.1 hypothetical protein SDJN03_00288, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 209 bits (531), Expect = 4.44e-68
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MAHFQSAHGGGRSVEIVSGKRYGGDGSCQIYGSPNLATTTNRVGPAAAAAKPWRFGDPEG 60
           MAHFQSAHGGGRSVEIVSGKRYGGDGSCQIYGSPNLATTTNRVGPAAAAAKPWRFGDPEG
Sbjct: 1   MAHFQSAHGGGRSVEIVSGKRYGGDGSCQIYGSPNLATTTNRVGPAAAAAKPWRFGDPEG 60

Query: 61  KRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY 100
           KRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY
Sbjct: 61  KRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY 100

[Close]

BLAST of Csor.00g195600 vs. NCBI nr
Match: XP_023524599.1 (uncharacterized protein LOC111788494 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 202 bits (514), Expect = 1.75e-65
Identity = 97/100 (97.00%), Postives = 98/100 (98.00%), Query Frame = 0


Query: 1   MAHFQSAHGGGRSVEIVSGKRYGGDGSCQIYGSPNLATTTNRVGPAAAAAKPWRFGDPEG 60
           MAHFQSAHGGGR VEIVSGKRYGGDGSCQIYGSPNLAT+TNRVG AAAAAKPWRFGDPEG
Sbjct: 1   MAHFQSAHGGGRCVEIVSGKRYGGDGSCQIYGSPNLATSTNRVGSAAAAAKPWRFGDPEG 60

Query: 61  KRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY 100
           KRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY
Sbjct: 61  KRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY 100

[Close]

BLAST of Csor.00g195600 vs. NCBI nr
Match: XP_022998630.1 (uncharacterized protein LOC111493216 [Cucurbita maxima])

HSP 1 Score: 201 bits (510), Expect = 7.12e-65
Identity = 96/100 (96.00%), Postives = 97/100 (97.00%), Query Frame = 0


Query: 1   MAHFQSAHGGGRSVEIVSGKRYGGDGSCQIYGSPNLATTTNRVGPAAAAAKPWRFGDPEG 60
           MAHFQSAHGGGR VEIVSGKRYGGDGSCQIYGSPNLATT NRVG A+AAAKPWRFGDPEG
Sbjct: 1   MAHFQSAHGGGRRVEIVSGKRYGGDGSCQIYGSPNLATTANRVGSASAAAKPWRFGDPEG 60

Query: 61  KRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY 100
           KRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY
Sbjct: 61  KRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY 100

[Close]

BLAST of Csor.00g195600 vs. NCBI nr
Match: KAA0044404.1 (hypothetical protein E6C27_scaffold46G001330 [Cucumis melo var. makuwa] >TYK29531.1 hypothetical protein E5676_scaffold655G001340 [Cucumis melo var. makuwa])

HSP 1 Score: 130 bits (328), Expect = 3.48e-37
Identity = 69/100 (69.00%), Postives = 77/100 (77.00%), Query Frame = 0


Query: 1   MAHFQSAHGGGRSVEIVSGKRYGGDGSCQIYGSPNLATTTNRVGPAAAAAKPWRFGDPEG 60
           M+ F SA    R +EIVSGK  G   + QIY SPNL T  NRVG +AAA KPW F DPE 
Sbjct: 1   MSAFDSA----RRIEIVSGKHNGARPAPQIYRSPNLDTNGNRVG-SAAAGKPWGFADPEA 60

Query: 61  KRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY 100
           KRRKRIAKYKVYTVEG+VKDSLRKGL+WIK +CSRIVHG+
Sbjct: 61  KRRKRIAKYKVYTVEGRVKDSLRKGLRWIKNRCSRIVHGF 95

[Close]

BLAST of Csor.00g195600 vs. NCBI nr
Match: KGN52839.1 (hypothetical protein Csa_014389 [Cucumis sativus])

HSP 1 Score: 130 bits (326), Expect = 6.24e-37
Identity = 65/89 (73.03%), Postives = 71/89 (79.78%), Query Frame = 0


Query: 12  RSVEIVSGKRYGGDGSCQIYGSPNLATTTNRVGPAAAAAKPWRFGDPEGKRRKRIAKYKV 71
           R +EIVSGK  G   + QIY SPNL T  NRVG +AA  KPW F DPE KRRKRIAKYKV
Sbjct: 4   RRIEIVSGKHNGARAAPQIYRSPNLDTNGNRVG-SAATGKPWGFADPEAKRRKRIAKYKV 63

Query: 72  YTVEGKVKDSLRKGLQWIKTKCSRIVHGY 100
           YTVEG+VKDSLRKGL+WIK KCSRIVHG+
Sbjct: 64  YTVEGRVKDSLRKGLRWIKNKCSRIVHGF 91

[Close]

BLAST of Csor.00g195600 vs. ExPASy TrEMBL
Match: A0A6J1GAV9 (uncharacterized protein LOC111452504 OS=Cucurbita moschata OX=3662 GN=LOC111452504 PE=4 SV=1)

HSP 1 Score: 209 bits (531), Expect = 2.15e-68
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MAHFQSAHGGGRSVEIVSGKRYGGDGSCQIYGSPNLATTTNRVGPAAAAAKPWRFGDPEG 60
           MAHFQSAHGGGRSVEIVSGKRYGGDGSCQIYGSPNLATTTNRVGPAAAAAKPWRFGDPEG
Sbjct: 1   MAHFQSAHGGGRSVEIVSGKRYGGDGSCQIYGSPNLATTTNRVGPAAAAAKPWRFGDPEG 60

Query: 61  KRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY 100
           KRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY
Sbjct: 61  KRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY 100

[Close]

BLAST of Csor.00g195600 vs. ExPASy TrEMBL
Match: A0A6J1KD11 (uncharacterized protein LOC111493216 OS=Cucurbita maxima OX=3661 GN=LOC111493216 PE=4 SV=1)

HSP 1 Score: 201 bits (510), Expect = 3.45e-65
Identity = 96/100 (96.00%), Postives = 97/100 (97.00%), Query Frame = 0


Query: 1   MAHFQSAHGGGRSVEIVSGKRYGGDGSCQIYGSPNLATTTNRVGPAAAAAKPWRFGDPEG 60
           MAHFQSAHGGGR VEIVSGKRYGGDGSCQIYGSPNLATT NRVG A+AAAKPWRFGDPEG
Sbjct: 1   MAHFQSAHGGGRRVEIVSGKRYGGDGSCQIYGSPNLATTANRVGSASAAAKPWRFGDPEG 60

Query: 61  KRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY 100
           KRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY
Sbjct: 61  KRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY 100

[Close]

BLAST of Csor.00g195600 vs. ExPASy TrEMBL
Match: A0A5A7TMP6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001340 PE=4 SV=1)

HSP 1 Score: 130 bits (328), Expect = 1.69e-37
Identity = 69/100 (69.00%), Postives = 77/100 (77.00%), Query Frame = 0


Query: 1   MAHFQSAHGGGRSVEIVSGKRYGGDGSCQIYGSPNLATTTNRVGPAAAAAKPWRFGDPEG 60
           M+ F SA    R +EIVSGK  G   + QIY SPNL T  NRVG +AAA KPW F DPE 
Sbjct: 1   MSAFDSA----RRIEIVSGKHNGARPAPQIYRSPNLDTNGNRVG-SAAAGKPWGFADPEA 60

Query: 61  KRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY 100
           KRRKRIAKYKVYTVEG+VKDSLRKGL+WIK +CSRIVHG+
Sbjct: 61  KRRKRIAKYKVYTVEGRVKDSLRKGLRWIKNRCSRIVHGF 95

[Close]

BLAST of Csor.00g195600 vs. ExPASy TrEMBL
Match: A0A0A0KV97 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G002560 PE=4 SV=1)

HSP 1 Score: 130 bits (326), Expect = 3.02e-37
Identity = 65/89 (73.03%), Postives = 71/89 (79.78%), Query Frame = 0


Query: 12  RSVEIVSGKRYGGDGSCQIYGSPNLATTTNRVGPAAAAAKPWRFGDPEGKRRKRIAKYKV 71
           R +EIVSGK  G   + QIY SPNL T  NRVG +AA  KPW F DPE KRRKRIAKYKV
Sbjct: 4   RRIEIVSGKHNGARAAPQIYRSPNLDTNGNRVG-SAATGKPWGFADPEAKRRKRIAKYKV 63

Query: 72  YTVEGKVKDSLRKGLQWIKTKCSRIVHGY 100
           YTVEG+VKDSLRKGL+WIK KCSRIVHG+
Sbjct: 64  YTVEGRVKDSLRKGLRWIKNKCSRIVHGF 91

[Close]

BLAST of Csor.00g195600 vs. ExPASy TrEMBL
Match: A0A6J1A329 (uncharacterized protein LOC110414502 OS=Herrania umbratica OX=108875 GN=LOC110414502 PE=4 SV=1)

HSP 1 Score: 111 bits (277), Expect = 1.40e-29
Identity = 63/101 (62.38%), Postives = 71/101 (70.30%), Query Frame = 0


Query: 5   QSAHGGGRSVEIVSGKRYGGDGSCQIYGS----PNLATTTNRV-GPAAAAAKPWRFGDPE 64
           Q  +G  R VEIVSGK     G  QI+ S    P+L    NR  GP+  A+KPW F DPE
Sbjct: 8   QRPYGVDRRVEIVSGKS-SNVGPNQIFSSRSRSPDLQPVPNRTAGPSQGASKPWGFTDPE 67

Query: 65  GKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY 100
            KR+KRIAKYKVYTVEGKVK SLRKGL+WIK KCS+IVHGY
Sbjct: 68  VKRKKRIAKYKVYTVEGKVKASLRKGLRWIKNKCSQIVHGY 107

[Close]

BLAST of Csor.00g195600 vs. TAIR 10
Match: AT3G62640.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 80.1 bits (196), Expect = 1.1e-15
Identity = 39/94 (41.49%), Postives = 54/94 (57.45%), Query Frame = 0


Query: 14  VEIVSGKRYGGDGSCQIYGS--------PNLATTTNRVGPAAAAAKPWRFGDPEGKRRKR 73
           ++IV+GK YG  G+ Q+Y +        P++             A PWR  D E KR+KR
Sbjct: 17  MDIVNGKGYGVGGTTQVYSTRPDSPKFQPSIPPPPGSTSKTRTTATPWRLIDAETKRKKR 76

Query: 74  IAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHG 100
           IA YK Y +EGKVK +++KG  WIK + S I+HG
Sbjct: 77  IATYKTYALEGKVKSTVKKGFHWIKDRYSHIIHG 110

[Close]

BLAST of Csor.00g195600 vs. TAIR 10
Match: AT2G47480.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 75.9 bits (185), Expect = 2.1e-14
Identity = 48/104 (46.15%), Postives = 61/104 (58.65%), Query Frame = 0


Query: 5   QSAHGGGRSVEIVSGKRYGGDGSCQIYGS----PNLATTTNRVGPAAA-AAKPWRFG--- 64
           Q  +G  R  EIVSGKR       QIYG+    P+L     +V    + A+   R G   
Sbjct: 13  QRTYGVDRRKEIVSGKRN------QIYGTRDYPPSLPPPPGKVAAGRSNASSSLRIGGLS 72

Query: 65  DPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY 101
           D E KR+KRIA+YK YTVEGKVK +L+ G +WIK KC +IVH +
Sbjct: 73  DAEMKRKKRIARYKAYTVEGKVKSTLKNGFRWIKNKCCQIVHRF 110

[Close]

BLAST of Csor.00g195600 vs. TAIR 10
Match: AT3G05725.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 65.5 bits (158), Expect = 2.8e-11
Identity = 28/49 (57.14%), Postives = 40/49 (81.63%), Query Frame = 0


Query: 51  KPWRFGDPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHG 100
           K W + DPE KR++R+AKYK+Y+ EGK+K +LRK  +WIK +CS+I+HG
Sbjct: 76  KGW-WNDPEIKRKRRVAKYKLYSAEGKMKITLRKSYKWIKIQCSKIIHG 123

[Close]

BLAST of Csor.00g195600 vs. TAIR 10
Match: AT2G19460.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 60.5 bits (145), Expect = 9.1e-10
Identity = 23/52 (44.23%), Postives = 39/52 (75.00%), Query Frame = 0


Query: 47  AAAAKPWRFGDPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVH 99
           ++++  W F DP+ +R+KR+  Y+ YTVEGK+K S RK  +WIK KC+++++
Sbjct: 65  SSSSSSWGFVDPDLQRKKRVVSYRAYTVEGKLKGSFRKSFKWIKDKCNKLLN 116

[Close]

BLAST of Csor.00g195600 vs. TAIR 10
Match: AT5G11970.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 59.3 bits (142), Expect = 2.0e-09
Identity = 33/93 (35.48%), Postives = 52/93 (55.91%), Query Frame = 0


Query: 10  GGRSVEIVSGKRYGGD--GSCQIYGSPNLATTTNRVGPAAAAAKPWRFGDPEGKRRKRIA 69
           GG  ++   G + GGD       YG+        +   + A +K W   DPE +R+KR+A
Sbjct: 13  GGMQIQPYHGNQ-GGDFRSYSASYGTRENNIYDVKKEKSIARSKSWGITDPELQRKKRVA 72

Query: 70  KYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY 101
            YK+Y VEGKVK S R   +W+K + +++V+G+
Sbjct: 73  SYKMYGVEGKVKGSFRNSFRWLKQRYTQVVYGW 104

The following BLAST results are available for this feature:

BLAST of Csor.00g195600 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g195600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949041.1	4.44e-68	100.00	uncharacterized protein LOC111452504 [Cucurbita moschata] >KAG6606946.1 hypothet...	[more]
XP_023524599.1	1.75e-65	97.00	uncharacterized protein LOC111788494 [Cucurbita pepo subsp. pepo]	[more]
XP_022998630.1	7.12e-65	96.00	uncharacterized protein LOC111493216 [Cucurbita maxima]	[more]
KAA0044404.1	3.48e-37	69.00	hypothetical protein E6C27_scaffold46G001330 [Cucumis melo var. makuwa] >TYK2953...	[more]
KGN52839.1	6.24e-37	73.03	hypothetical protein Csa_014389 [Cucumis sativus]	[more]

BLAST of Csor.00g195600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GAV9	2.15e-68	100.00	uncharacterized protein LOC111452504 OS=Cucurbita moschata OX=3662 GN=LOC1114525...	[more]
A0A6J1KD11	3.45e-65	96.00	uncharacterized protein LOC111493216 OS=Cucurbita maxima OX=3661 GN=LOC111493216...	[more]
A0A5A7TMP6	1.69e-37	69.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KV97	3.02e-37	73.03	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G002560 PE=4 SV=1	[more]
A0A6J1A329	1.40e-29	62.38	uncharacterized protein LOC110414502 OS=Herrania umbratica OX=108875 GN=LOC11041...	[more]

BLAST of Csor.00g195600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62640.1	1.1e-15	41.49	Protein of unknown function (DUF3511)	[more]
AT2G47480.1	2.1e-14	46.15	Protein of unknown function (DUF3511)	[more]
AT3G05725.1	2.8e-11	57.14	Protein of unknown function (DUF3511)	[more]
AT2G19460.1	9.1e-10	44.23	Protein of unknown function (DUF3511)	[more]
AT5G11970.1	2.0e-09	35.48	Protein of unknown function (DUF3511)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021899	Protein of unknown function DUF3511	PFAM	PF12023	DUF3511	coord: 55..99 e-value: 1.1E-25 score: 89.1
None	No IPR available	PANTHER	PTHR33193	DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED	coord: 4..100
None	No IPR available	PANTHER	PTHR33193:SF13	DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED	coord: 4..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g195600.m01	Csor.00g195600.m01	mRNA