Csor.00g194880 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g194880
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	nijmegen breakage syndrome 1 protein
Location	Csor_Chr01: 1844284 .. 1851184 (+)
RNA-Seq Expression	Csor.00g194880
Synteny	Csor.00g194880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTGGGGCTTCTTCCCCGTCGATCCTCTTTCAGGTGCGTTCGCTTCGTGATTTTCTGATTACTTCTTGCTGCTGTAGAACTAGTTTTCTTTTAGTTGTTGTAAGACAACTTTTTGGCTACTGATAAAAAGCTTCATATCTATTTACAATGCTTACTTTCTGAAGAATCGTCAGTTTTCTTTTGGTTGGACAATTTGTATGAACAAGTGCATGTTGCAGGTGAGGAAAAATTCTACATTTTTGCGCCTGGGAAGTATAAAGTGGGTCGTAAAGGTACTTAGATTATGCTAGTAGTTATATTTGATGCAGTACTTTTGCTTCTGAATGATTAATTTTATGGCGTATTCTTGGTCTGATAAAATTTAGAAATATTTTTAATGTTTGTAGAAGCGATATTTCTTTTACCAGAACATTTCCTGTGCGCATTTTTTCCTTCGTCTGTTTTTGTTTTATCATATACTTTATTATTAAGAAGCGGATATAGGATTAGACTGTAATTTTAATTGGTTAACTATAAGTGTACTCAATGTCCTGATGAGACCCTATCAAGGCTACTTTTGACCATATTGGCCTTACTGAGTGAGTGTCTGAGACCTTATTGGGCGAGTGATCCCAAGTAATCCGTGTCCTTTGAAATTGTAGTCAAGAGGCAAGAGTTCCATGCTCCATATACTCCAGTCGAAGAGTGTTAATAAAGTTGTGGGAAGGATACTACACCTCCAAACGAGCTAAACTAGGATATCGAAGATGTTGCTCCGCCCATAGATACCGACTTGCTAATTTCCATGCGAAAAAAATGGGCTCAAAGTTTCACCCTTCGACCATGATATCCTCAATCCCACTCCTTTAATTATAATTTCCCAAAAAGATGTCAAAGCTTCCTTACTCGCGTTTGGGGAATGTTCGAACAGCTATATATTTATTCCTCTCTCCTTTCCAGTGAGATTTGCCATTTTTGCTAAATTTGTTAGAGAGAGCAATGCGTGTGTCAAATGACGAGAGACAGAGAGAGCTTAGGTTAGAGACTAGAGGAGGGTCAGAGAGACTCTATGTAGGGAGAGATAGATTAAGATAGAGGGCTTACTTGTCGCTTTGATAAGTTAGAGAGCTTGATGCTATCACTTCGAGTGAAGAATTGACAGAGGGTATTTTGACTTTTGAGGGAGGCATTTAAAAATTTGACATTATGCTCTTAAAAAAAAAAAGTTGAAGTGCTCAGGCACCACGCCTCAGAGCTCAAGCAGGAGGGCGCACACATATATTTGTACCTATGTGAGGCAAGGTTCTTCATGCAAGTACTTTTTTGAGTTTTCTAAACAATGACTAGATCAATATTATAAACAGTTTCCATAATGTTTTGTAGTTGTTTATTTTCAATCACGTTGTCTTCAAAGTTCCTTTTTGTATTGCATTTTTGCTGCCTTTTTCATGAGAAAAAATATTTTGAACATTCAAGAACATCCATTTAATAGTCACTTTCTTTAGCTCTCAAATCATGCTCTCAGTTGTTTGCTCATTCTGTGATCATGTTTATCCCACAGGCTGCGATTTGACTATAACAAAAGATAAAGGAGTTTCCCGCATCCATGCAGAAATAGTTGTAGATGCTATGATCTTTTTAAATTCCCACAAGAGTTATTTATCTAATGTTTCCTCTAAAGTGAGGATTAGCGATTGCTCCAAGTATGGGACATTTGTTAGCAGGAAATCTGGGTTGAAGGAGAAAATTCACGAGCTTCCAAAAAAAGAAGCAAGCTTGTATGATGGAGATGTGATTTCATTTGGATCTGGCAATGCAACGTACAGGTAATCTGAGAAACATTTAAATTAGTGACAAGATTTATCATTCAAGTTGCTCTCACTGGTTAGCTCTTTGTTAGAAGCAGGGTATGCTTTTTATATATGGTTTATTAGACTCATTATTAAATCCATGTCTCTCAGTTAAACCAGATGCGGTTGCTTGCTATTTATTCAGTAAGTGATTGTTTTCTGCAAGGAATTCTGTAAATGCTTTAATACTTCCTTTTTAGATTCTATGACAATATTCCTCTCTATATTTCCCATATTCTTTTTCTTTTTTCTTTCTACTTTCCTTTATTCTTGAATCTCAACCACTGAAGCAATTTTTTTGTGATAACTTTGTCTCCTTTGCTAATGTTTTTGTATATCCTAATTTTTCTAGATTTTGGGTTTTACTTTTAGCTTCCATTAATATAGATGGCAAAGTTTCTTGTTATTTGTACTAAAATTTATTTTTAGAAGCTAGAAGATCTCATATGCCTTTTTGCTATTGTGAATATACATTAACATATTTTAATGCTAATATACTTTACCATTTTATAGTCAAAGAAACTTTACTTTCTATCTAACACCCAATACGCTCAAAAACCTTATTATCCCATAAACAAATCTTGCAGGTTCTCCTTTGTGCAACTTGTGTTTTATGTTCACCATTCAGTGTCCTTCCAATTCCAGCTGCTGAGGGACAAGGTTTCATCCATAGGTCAGTCATAAAGAGGTTGCCGATCTTCTTTTACTTCACCTATGAAAGGAATTCTTGTCTGATTAATAGAAGTTTCAATTTTCCAAGGTTTCTTATGTAACTGCTTAGTTGCTTTATGTTAGCATGTCCTAGTACAAACACTTGAAAACTCTAAATATGACCTTAAAACAGGGGAGAATACTTAACCTTATTCATGTGTGGAACTCTCAACTTAACAGCATGATAAATTTAAAGAACGGAAACTAACTAAAGGAAGGTTTGTTTAAATTAGGGATAAACTGTGAAAAAGATAAAAATAAAAAAGAATAACAATACATTATGAACACACAAATAACTTGCTGCTATATACATCCTTACACTCTTTTCTTTTAATATATGAAAATCATCTGTCTTGGTGTTTTAAAACATAAGAAAAATTTGAGACTGATTCATTTTCCAAAATCATCTGACTTCTAATAAGTTGAAATGTTTATGAGGCACGTTTATCAATGAGCTCTGCATTATTGATACTGTGATTCCATCAATCAAGTTCACCATCACTATTTATTACATTGTTTATGCTGCACAACATCTACTCATTCTACAAGTTAAATCTGCATTGAAGATAGTGAATTAGTTTGTCGTTTTGGTCGAATTTGAAGAGTATATTTAAATGTAGGTGCTTCTACATCTCATGATATTCGGGAGTGTACGCATGTGCTTGTAGAGGAACTGATGCCTTTTGATGAAGCTCTAGTTGACGCCATAGTGGCTGAGAAACCTTTTGTTATCACAAGTTGGGTTGAGGTAAAAATATGCTTCATATATTAATTGTTTCACTGTGATGCCAAGTTCTGTCATCTTGTTCACCCCAACATTACGGAGGAACCTGATCTTGAGAATAGAAAATAACAGTGAAATTGTATTAAGATATAAAAGGAAAATGACAATATTAACCCCATTCCAAAATTCTAATTGAATAGAACCCTTTGATTATAACGATCCTGCCCTAACTACACTAAGTAATTACTCAAATATTTTTCTCCTTTCGATTTCTAGTTTTAGGTATCCTTGACAATTTTTCATGTACATCATTGTTGAAGTCTAGCAAGGATAAACATAATTTAAAACTAGAAAGTGTACACCTATATGGTAAATACAAATAATGGAACACGGAAAAAACGAGGAACAAGTAGATTTTTTCTTGGAGATCCTTGGAGGAGCATCCTCATGACTCTCAACAGGCCTATTAGTTTCTTTTGCTTTGGCTCTATTAACAAACTTCAGTTCAACCATCTGCAAAATTACTTTACGAAAATCTGAAGATTCTTTATGCTTTTATTTTTATGTTGACCATCATCATGGATCAAGAATGACTTTGATTACCACGTTGTTGAATAAAGAAGTTACTTCAATTTGTTTTAATCTATGCACAGATCAACGCCAAGCATTATCATTATTTACAGTTGTTGTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAAGAAACTGAGTTTTCATTGAAAAATGAAAATATACAAGGGCATTAAAAAAAAAGTCCACAAAAAAGGAGATCATATATCTGATTCTTTCTATTTCCATAACAATGCAATTAGCGAAAACATGAGACAAGCGAGATTCTGCATTCTAACTGATTGTTACACTTTAGTTATTTGCAGGAAGAACCTCCTGTAACGAGATTCCATGCTTTGATTCGTAAGTGCTGCCTTTTTTAAGTTTGGCTGGGAACATATTCTTGAGTAATAGTTTTTTTTTTGTTTTTTTTTTTGAACTCCTGCATTTCACTCCAACCTTTTGTATTTGTTCTTTGAACCAGCTATCATCCAACAATGACTGTGGAAGGGATGCATGTCAAAGTTGTGGATCCAAACACTCGTAAAAACTGTTTGAGTGGATACACTTTTTTATTAGGTTCGGCACATATGGTAAGGCTCTGTTTTTTCATTGTCACATTCTTGAGAGTTGCTGGCTTGAGTAGGCAACCCTTTGATGAATGAATTATTGAAAAGAATTAGCCTTATGGTCTTTTTATTCTGTGATAAACTTAGTTAACCCAACATGTAGGAGTTCGAAATAAATAAAGGAAAGAAGAAGGAAAAAAGTTTAAATCTCATTCCATTCGACCTTATGACAAAATTTTCTCGGATACGAGTGGTGTTTATATTCTTTAGTTTTCTGTTCAGAAATAACTCTTCTGGTGGATTGCTTAGACATTCAATAATTTTGATATTCAATTTCCTATCTTTTGGAAGTACAAATATGGGGATCGGTTGAAGATGTTGTTGCAACAAGTTGGTGGTGCAAATGTTTTGTCTATTGAGGACTTCTCTTCAGATAGCCAAGTACGAGGTTTTATCTCTTTCCACATAGACTATATCCATTCTTTCCTAATTGCTTTGTGAAGGCGTGGGTAAAAACTACTGTTTGACTAACTTCATGTAAAAAGATTCTAATTCACAATATTTCTGACTGCAATATGGTCTTATGAACAACATGAACTGCATTACTAATAAGCGTATGGATTCTAGGATTGAGTCTTATGAATAATACATGCTTAATACTGATGAAGTATAACTTACATCACATGGGGCCATAATGATTTATTACAAAAACCATCTATATAGTTAATATCAATGCTAATCGAACATTAATTACTATCCAACCAATAAGGCTTAAGATGTGAGCTGTGTTTAAAATATGTCTCAAATGGCGCCTTATGATCTTTGATTGGACTAAATACAACAACTCGACATCTTTATTTCATTTCTTTTATTTATTTCAGTTCTATGAACCTGGTGTTTTTTGGGTAATTAATTTGTATGCTAACTGTTGTAGGACTTTGGTAATGGAGAAAATGAACGGGTAGTATTCATTATTCCTGGAGGATTAGCAGAAAAGTTGGGTTCATCCTATAAGGTTGATTCTTATTATAAAATAACTGAGTTGGTTTTGATATCATCTGTTTTGAGTGGAAAGCTGGACAGAGACAATTTGATATCACCCTGTGGTAAGTAGTCTTACTCACTACTAGTTTCATTTGTAGTATATTTACTCATTGTTAAAAACTGTTTATATTTCTTCATCTTAACTTCATTCATCTGACTGAATATAAAGTTTCTTTGCAGAACCAGGTTCCTCTACATGCTCCACTGATGAAACCGTGGTAGCAGAATCCGATCTCGAAGCAGAAACCGATAAACCAGTTGCTTCTAATGTCCAAGGTTCAGATGAACATTTAGGCATACCAGATGAACATTTAAGCAAACCAGAGGTGTCCATCGACCATGCTGATTCTGGATCAGCTGGGGGCCATAAAACATTCAGAAATAGTTACAGTGGAGTCAAAATGAGAAACGACAAGGTCGATGAATCTGACAACAGCAATATAGACATTATTTTCACTCAAAATTTAATCGTGCAACACGTGATGAAACCCTCATCAATAGTTACTGCAGAAGACGGTGGAATTACGAACTTCAAACGCTTCAGGAAGGTATTACTATTAGCCTCTGAATGTGTTATAATCTGCACCATTTCGTTTTAACTGGCGTGCACATTACTGTTTGATATTGATGAAATCTTAGTTATATCTTTTTATATGTCATAAGATCATTACCAATTCCCATCGATCGACCATTGTATGCGTTTTCTAATCTTAAACGATGAACCAAATGATGGTCGTGATCATATTTGCATTCAAATGTTCGAATATGCATTTAAGTAGCATTAAAAACAGTGTTTGTTTCTTGTAATAGTGGCACATAGAGAAAAATGTTATGGAGGTTAATACGCACATCCTTTCAACTTTTTTGCAGACAGAAACTCACTCTGGGAATAGCTTTTATAATCTTGTTCCATTTGATAAGTATCCTTACAAGTAAGTGTTTCTCTCATGTCTTGGAGTCATTTGGGATGTGTTAGGCGCATAGTAGAGACGTTTCTTTGCATGCCATTACATATTCTTTCATGTTTATTTATTGAAAGTTGGGTATCTCACGTTGAATTAAGATGATATCTTTAAACATTTCAAGCCCGCACCTCCTCTACCTTTGAATCTGATTACGTTAAAAGAAAATCACCTGCCATTGTTTTATGGGGGTTTCTAGGGATAACGGTGATGGAAGGGAAGAAATTGCAGAATCCTTGAAAGAAGAAAGAAAGCGCAAGGAAATGGAAGCTATATCTGAAGATTTATTTAATAACGAAAAGGTGAGTCTTTTTTACTTGTTTTAGCACACCACAAGTTACAAACATGGCATGCATGAAGACATACATTTTTAACTTGCCTAAACTTCAGGGACGACGTCGTGGAATGGTCGGTTCCCTTCAACAGCTCCTTACTCGTTCTTAG

mRNA sequence

ATGGTTTGGGGCTTCTTCCCCGTCGATCCTCTTTCAGGTGAGGAAAAATTCTACATTTTTGCGCCTGGGAAGTATAAAGTGGGTCGTAAAGGCTGCGATTTGACTATAACAAAAGATAAAGGAGTTTCCCGCATCCATGCAGAAATAGTTGTAGATGCTATGATCTTTTTAAATTCCCACAAGAGTTATTTATCTAATGTTTCCTCTAAAGTGAGGATTAGCGATTGCTCCAAGTATGGGACATTTGTTAGCAGGAAATCTGGGTTGAAGGAGAAAATTCACGAGCTTCCAAAAAAAGAAGCAAGCTTGTATGATGGAGATGTGATTTCATTTGGATCTGGCAATGCAACGTACAGGTTCTCCTTTGTGCAACTTGTGTTTTATGTTCACCATTCAGTGTCCTTCCAATTCCAGCTGCTGAGGGACAAGGTTTCATCCATAGGTGCTTCTACATCTCATGATATTCGGGAGTGTACGCATGTGCTTGTAGAGGAACTGATGCCTTTTGATGAAGCTCTAGTTGACGCCATAGTGGCTGAGAAACCTTTTGTTATCACAAGTTGGGTTGAGTTATTTGCAGGAAGAACCTCCTGTAACGAGATTCCATGCTTTGATTCCTATCATCCAACAATGACTGTGGAAGGGATGCATGTCAAAGTTGTGGATCCAAACACTCGTAAAAACTGTTTGAGTGGATACACTTTTTTATTAGGTTCGGCACATATGTACAAATATGGGGATCGGTTGAAGATGTTGTTGCAACAAGTTGGTGGTGCAAATGTTTTGTCTATTGAGGACTTCTCTTCAGATAGCCAAGACTTTGGTAATGGAGAAAATGAACGGGTAGTATTCATTATTCCTGGAGGATTAGCAGAAAAGTTGGGTTCATCCTATAAGGTTGATTCTTATTATAAAATAACTGAGTTGGTTTTGATATCATCTGTTTTGAGTGGAAAGCTGGACAGAGACAATTTGATATCACCCTGTGAACCAGGTTCCTCTACATGCTCCACTGATGAAACCGTGGTAGCAGAATCCGATCTCGAAGCAGAAACCGATAAACCAGTTGCTTCTAATGTCCAAGGTTCAGATGAACATTTAGGCATACCAGATGAACATTTAAGCAAACCAGAGGTGTCCATCGACCATGCTGATTCTGGATCAGCTGGGGGCCATAAAACATTCAGAAATAGTTACAGTGGAGTCAAAATGAGAAACGACAAGGTCGATGAATCTGACAACAGCAATATAGACATTATTTTCACTCAAAATTTAATCGTGCAACACGTGATGAAACCCTCATCAATAGTTACTGCAGAAGACGGTGGAATTACGAACTTCAAACGCTTCAGGAAGACAGAAACTCACTCTGGGAATAGCTTTTATAATCTTGTTCCATTTGATAAGTATCCTTACAAGGATAACGGTGATGGAAGGGAAGAAATTGCAGAATCCTTGAAAGAAGAAAGAAAGCGCAAGGAAATGGAAGCTATATCTGAAGATTTATTTAATAACGAAAAGGGACGACGTCGTGGAATGGTCGGTTCCCTTCAACAGCTCCTTACTCGTTCTTAG

Coding sequence (CDS)

ATGGTTTGGGGCTTCTTCCCCGTCGATCCTCTTTCAGGTGAGGAAAAATTCTACATTTTTGCGCCTGGGAAGTATAAAGTGGGTCGTAAAGGCTGCGATTTGACTATAACAAAAGATAAAGGAGTTTCCCGCATCCATGCAGAAATAGTTGTAGATGCTATGATCTTTTTAAATTCCCACAAGAGTTATTTATCTAATGTTTCCTCTAAAGTGAGGATTAGCGATTGCTCCAAGTATGGGACATTTGTTAGCAGGAAATCTGGGTTGAAGGAGAAAATTCACGAGCTTCCAAAAAAAGAAGCAAGCTTGTATGATGGAGATGTGATTTCATTTGGATCTGGCAATGCAACGTACAGGTTCTCCTTTGTGCAACTTGTGTTTTATGTTCACCATTCAGTGTCCTTCCAATTCCAGCTGCTGAGGGACAAGGTTTCATCCATAGGTGCTTCTACATCTCATGATATTCGGGAGTGTACGCATGTGCTTGTAGAGGAACTGATGCCTTTTGATGAAGCTCTAGTTGACGCCATAGTGGCTGAGAAACCTTTTGTTATCACAAGTTGGGTTGAGTTATTTGCAGGAAGAACCTCCTGTAACGAGATTCCATGCTTTGATTCCTATCATCCAACAATGACTGTGGAAGGGATGCATGTCAAAGTTGTGGATCCAAACACTCGTAAAAACTGTTTGAGTGGATACACTTTTTTATTAGGTTCGGCACATATGTACAAATATGGGGATCGGTTGAAGATGTTGTTGCAACAAGTTGGTGGTGCAAATGTTTTGTCTATTGAGGACTTCTCTTCAGATAGCCAAGACTTTGGTAATGGAGAAAATGAACGGGTAGTATTCATTATTCCTGGAGGATTAGCAGAAAAGTTGGGTTCATCCTATAAGGTTGATTCTTATTATAAAATAACTGAGTTGGTTTTGATATCATCTGTTTTGAGTGGAAAGCTGGACAGAGACAATTTGATATCACCCTGTGAACCAGGTTCCTCTACATGCTCCACTGATGAAACCGTGGTAGCAGAATCCGATCTCGAAGCAGAAACCGATAAACCAGTTGCTTCTAATGTCCAAGGTTCAGATGAACATTTAGGCATACCAGATGAACATTTAAGCAAACCAGAGGTGTCCATCGACCATGCTGATTCTGGATCAGCTGGGGGCCATAAAACATTCAGAAATAGTTACAGTGGAGTCAAAATGAGAAACGACAAGGTCGATGAATCTGACAACAGCAATATAGACATTATTTTCACTCAAAATTTAATCGTGCAACACGTGATGAAACCCTCATCAATAGTTACTGCAGAAGACGGTGGAATTACGAACTTCAAACGCTTCAGGAAGACAGAAACTCACTCTGGGAATAGCTTTTATAATCTTGTTCCATTTGATAAGTATCCTTACAAGGATAACGGTGATGGAAGGGAAGAAATTGCAGAATCCTTGAAAGAAGAAAGAAAGCGCAAGGAAATGGAAGCTATATCTGAAGATTTATTTAATAACGAAAAGGGACGACGTCGTGGAATGGTCGGTTCCCTTCAACAGCTCCTTACTCGTTCTTAG

Protein sequence

MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFLNSHKSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRFSFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAEKPFVITSWVELFAGRTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYTFLLGSAHMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENERVVFIIPGGLAEKLGSSYKVDSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVASNVQGSDEHLGIPDEHLSKPEVSIDHADSGSAGGHKTFRNSYSGVKMRNDKVDESDNSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYPYKDNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGMVGSLQQLLTRS

Homology

[Close]

BLAST of Csor.00g194880 vs. ExPASy Swiss-Prot
Match: Q0H8D7 (Nijmegen breakage syndrome 1 protein OS=Arabidopsis thaliana OX=3702 GN=NBS1 PE=1 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 3.8e-112
Identity = 236/546 (43.22%), Postives = 337/546 (61.72%), Query Frame = 0


Query: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFLNSH 60
           MVWG FPVDPLSGE+K+YIF+ G YKVGRKGCD+ I KDKGVSRIHAE+  DA     S 
Sbjct: 1   MVWGLFPVDPLSGEDKYYIFSKGIYKVGRKGCDIIINKDKGVSRIHAELTFDATTVSTSR 60

Query: 61  KSYLSNVSSK--VRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATY 120
           ++  S+ +S   +R+ DCSKYGTFV    G K+K+HEL  KE  L DGDVI+FG+G+A Y
Sbjct: 61  RNKSSSDTSSFVIRVKDCSKYGTFVKTDLGTKDKVHELSNKEKILQDGDVIAFGTGSAIY 120

Query: 121 RFSFVQLVFYV-HHSVSFQF-QLLRDKVSSIGASTSHDI-RECTHVLVEELMPFDEALVD 180
           R S + LVFY+   S +F+  Q ++D VSSIGA  S  +  ECTHVL+E  M  +EAL++
Sbjct: 121 RLSLIPLVFYLCPSSETFKVDQPVQDAVSSIGARISPTLSEECTHVLLEPRMQVNEALIN 180

Query: 181 AIVAEKPFVITSWVELFAGRTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYTF 240
           AI+A+K  ++T+WV L A ++ C+EIP +  Y P++ VE   V V++ N R+ CL G+TF
Sbjct: 181 AILAKKTIILTNWVMLLAEKSICSEIPGYSQYRPSVMVEEALVDVLELNVREKCLEGFTF 240

Query: 241 LLGSAHMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENERVVFIIPGGLAEKLG 300
           +L     Y++G     LL +V GA  ++IED SS SQD   GE  R++ +IP    +K G
Sbjct: 241 VLEPTDTYRFGCSFPSLL-EVCGAETVTIEDISSMSQDSQFGEINRMICVIPKSAGDKFG 300

Query: 301 SSYKVDSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAE---- 360
               +    ++ E+ L+ +V SG L   +LI P    SS+CSTDETVVA+S+ E E    
Sbjct: 301 RFKHLSLLSRVNEMDLVCAVFSGNLPSTSLIPPSVVISSSCSTDETVVADSEAEEEETTS 360

Query: 361 -------------TDKPVASNVQGSDEHLGIPDEHLSKPEVSIDHADSGSAGGHKTFRNS 420
                         +KP A  ++ S   +     +L++ + S++      + GH   +NS
Sbjct: 361 SVHMIDATEKAETPEKPAAIVIEDSPVTILEETSNLNEFK-SVNLLADTESRGHMDEKNS 420

Query: 421 YSGVKMRNDKVDESDNSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSG 480
              V +R D+ DE++    +II+TQ+LIV+ +     + +    G+ +FKRFRK     G
Sbjct: 421 SDSVTIRRDRNDEAETGKSEIIYTQDLIVRDLRSTRKVQSTGGEGVVDFKRFRKGNVTCG 480

Query: 481 NSFYNLVPFDKYPYKDNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGMVGSLQ 525
           NSF +L+PF K PYK+      ++ + +KEE+KRK+MEAI+EDLF  EK R+RG  GS++
Sbjct: 481 NSFSSLIPFAKDPYKEYDSW--DVTDFMKEEKKRKQMEAIAEDLFKTEKARKRGTAGSIR 540

[Close]

BLAST of Csor.00g194880 vs. ExPASy Swiss-Prot
Match: Q7XD82 (Nijmegen breakage syndrome 1 protein OS=Oryza sativa subsp. japonica OX=39947 GN=NBS1 PE=1 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.3e-88
Identity = 203/561 (36.19%), Postives = 323/561 (57.58%), Query Frame = 0


Query: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFLNSH 60
           MVW   PVD + G ++ YIFA G YKVGRK CD+ +  D  +SR+HAEIVV+ M+  +  
Sbjct: 1   MVWALTPVDTVRGAQRCYIFAAGTYKVGRKDCDVIVQTDTSISRVHAEIVVEKMVAWDPQ 60

Query: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLK-EKIHELPKKEASLYDGDVISFGSGNATYR 120
               +N  S VR+ D SKYGTF ++  G +  ++H+   ++A L DGD ++FG+GNAT+R
Sbjct: 61  SGAPAN-PSYVRVVDRSKYGTFFNKVQGTQGSRLHK--DEDAMLADGDTVTFGTGNATFR 120

Query: 121 FSFVQLVFYVHHSVSFQFQ-LLRDKVSSIGA-STSHDIRECTHVLVEELMPFDEALVDAI 180
            SFV +V + H   S +    L+  ++SIGA +T     ECTHVLV+E       L+DA+
Sbjct: 121 LSFVPIVVFFHGKKSGRISPCLQAVMTSIGAYATRKWSDECTHVLVDESCSLTPELLDAV 180

Query: 181 VAEKPFVITSWVELFAGRTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYTFLL 240
           +A+K  V+  W ++ A +    E+P    Y P +T++GM ++VV+    ++CL+GYTF+L
Sbjct: 181 LAKKQIVLGDWFKVMAEKNIHTEMPSSTQYIPKLTLDGMEIQVVEIKLIESCLAGYTFIL 240

Query: 241 GSAHMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENERVVFIIPGGLAEKLGSS 300
           GS+  YK+GD+L  LL+   GA  L +++F ++SQD G GEN++ + ++P     +    
Sbjct: 241 GSSEKYKFGDKLHALLEST-GAKYLHVDEFCANSQDSGAGENDKDILLVPAKSPLEFSKI 300

Query: 301 YKVDSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAET---DK 360
             +    KIT++ L +++LSG L+   +  P    +S+ STDET+V +SD+E +T   D 
Sbjct: 301 RGLFPLSKITDVKLFAAILSGHLEATAIEPPAYIVASSNSTDETIVVDSDVEIDTATSDH 360

Query: 361 PVASNVQGSDEHLGIPDEHLS---KPEVSIDHADSGSAGGHKTFRNSYSG---------- 420
            VA++   S+ H+    EH+S   K  V+I   D+ +    KT  N +S           
Sbjct: 361 TVAAS--KSEHHI----EHISDDKKEVVAISEEDAVNLVEAKTSINLHSDQEKDEIVKPM 420

Query: 421 --------------------------VKMRNDKVDESDNSNIDIIFTQNLIVQHVMKPSS 480
                                      K+  D+  +S +    +I+TQNL+V+ +++ + 
Sbjct: 421 EEDVKVIEKTATMRGFKVEGEDIPVMTKVPKDETLDSRDETCHVIYTQNLVVKSILQSAR 480

Query: 481 IVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYPYKDNGDGREEIAESLKEERKRKEM 517
             + E GGI NFKRFRK    SGNSF +L+P+ + PY+++   R  + + ++EE+KR++M
Sbjct: 481 AESIETGGI-NFKRFRKRGAVSGNSFKDLIPYSREPYRESDYERGTVTDFMREEKKRRQM 540

[Close]

BLAST of Csor.00g194880 vs. ExPASy Swiss-Prot
Match: B8BHK8 (Nijmegen breakage syndrome 1 protein OS=Oryza sativa subsp. indica OX=39946 GN=NBS1 PE=2 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 7.3e-87
Identity = 201/561 (35.83%), Postives = 322/561 (57.40%), Query Frame = 0


Query: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFLNSH 60
           MVW   PVD + G ++ YIFA G YKVGRK CD+ +  D  +SR+HAEIVV+ M+  +  
Sbjct: 1   MVWALTPVDTVRGAQRCYIFAAGTYKVGRKDCDVIVQTDTSISRVHAEIVVEKMVAWDPQ 60

Query: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLK-EKIHELPKKEASLYDGDVISFGSGNATYR 120
               +N  S VR+ D SKYGTF ++  G +  ++H+   ++A L DGD ++FG+G+AT+R
Sbjct: 61  SGAPAN-PSYVRVVDRSKYGTFFNKVQGTQGSRLHK--DEDAMLADGDTVTFGTGSATFR 120

Query: 121 FSFVQLVFYVHHSVSFQFQ-LLRDKVSSIGA-STSHDIRECTHVLVEELMPFDEALVDAI 180
            SFV +V + H   S +    L+  ++SIGA +T     ECTHVLV+E       L+DA+
Sbjct: 121 LSFVPIVVFFHGKKSGRISPSLQAVMTSIGAYATRKWSDECTHVLVDESCSLTPELLDAV 180

Query: 181 VAEKPFVITSWVELFAGRTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYTFLL 240
           +A+K  V+  W ++ A +     +P    Y P +T++GM ++VV+    ++CL+GYTF+L
Sbjct: 181 LAKKQIVLGDWFKVMAEKNIHTAMPSSTQYIPKLTLDGMEIQVVEIKLIESCLAGYTFIL 240

Query: 241 GSAHMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENERVVFIIPGGLAEKLGSS 300
           GS+  YK+GD+L  LL+   GA  L +++F ++SQD G GEN++ + ++P     +    
Sbjct: 241 GSSEKYKFGDKLHALLEST-GAKYLHVDEFCANSQDSGAGENDKDILLVPAKSPLEFSKI 300

Query: 301 YKVDSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAET---DK 360
             +    KIT++ L +++LSG L+   +  P    +S+ STDET+V +SD+E +T   D 
Sbjct: 301 SGLFPLSKITDVKLFAAILSGHLEATAIEPPAYIVASSNSTDETIVVDSDVEIDTATSDH 360

Query: 361 PVASNVQGSDEHLGIPDEHLS---KPEVSIDHADSGSAGGHKTFRNSYS----------- 420
            VA++   S+ H+    EH+S   K  V+I   D+ +    KT  N +S           
Sbjct: 361 TVAAS--KSEHHI----EHISDDKKEVVAISEEDAVNLVEAKTSINLHSYQEKDEIVKPM 420

Query: 421 -------------------------GVKMRNDKVDESDNSNIDIIFTQNLIVQHVMKPSS 480
                                      K+  D+  +S +    +I+TQNL+V+ +++ + 
Sbjct: 421 EEDVKVIEKTATMRGFKVEGEDIPVMTKVPKDETLDSRDETCHVIYTQNLVVKSILQSAR 480

Query: 481 IVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYPYKDNGDGREEIAESLKEERKRKEM 517
             + E GGI NFKRFRK    SGNSF +L+P+ + PY+++   R  + + ++EE+KR++M
Sbjct: 481 AESIETGGI-NFKRFRKRGAVSGNSFKDLIPYSREPYRESDYKRGTVIDFMREEKKRRQM 540

[Close]

BLAST of Csor.00g194880 vs. ExPASy Swiss-Prot
Match: Q5I2W8 (Nibrin OS=Danio rerio OX=7955 GN=nbn PE=2 SV=2)

HSP 1 Score: 59.3 bits (142), Expect = 1.5e-07
Identity = 70/268 (26.12%), Postives = 111/268 (41.42%), Query Frame = 0


Query: 2   VWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFLNSHK 61
           +W   P +  SG E   + A  +Y VGRK C++ +T D+ +SR+HA + V          
Sbjct: 1   MWKLQPTE--SGGESVILLAGQEYVVGRKNCEILLTNDQSISRVHAVLTV---------- 60

Query: 62  SYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRFS 121
                    V + D SKYGTFV+      EK+     K  +L  G  I+FG   +  +FS
Sbjct: 61  -----TEQAVTLKDSSKYGTFVN-----GEKLESGSTK--TLQTGYKITFGVFQS--KFS 120

Query: 122 FVQLVFYVHHSV---SFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIV 181
             +    V  S      +  L +D  S  G   S    +CTH LV   +      + A++
Sbjct: 121 LEKECIVVCSSCVDNEGKVTLSQDIRSVGGRLVSSWTSDCTH-LVMPTVKVTIKTICALL 180

Query: 182 AEKPFVITSWVELFAGRTSCN-EIPCFDSYHPTMTVEGMHVKVVDPNT---RKNCLSGYT 241
             +P V  ++    +        +P  + + P +    +    VD +    RK+   G T
Sbjct: 181 CCRPIVKPAFFSALSKAVQQKLPLPKAERFRPQIDEPSLARDDVDLSARPERKSLFKGKT 238

Query: 242 FLLGSAHMYKYGDRLKMLLQQVGGANVL 263
           FL  S+   K   RL + +   GG + L
Sbjct: 241 FLFLSSKQMK---RLSVAVSCGGGVSQL 238

[Close]

BLAST of Csor.00g194880 vs. NCBI nr
Match: KAG6607018.1 (Nijmegen breakage syndrome 1 protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1040 bits (2688), Expect = 0.0
Identity = 524/524 (100.00%), Postives = 524/524 (100.00%), Query Frame = 0


Query: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFLNSH 60
           MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFLNSH
Sbjct: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFLNSH 60

Query: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120
           KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF
Sbjct: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120

Query: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180
           SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE
Sbjct: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180

Query: 181 KPFVITSWVELFAGRTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYTFLLGSA 240
           KPFVITSWVELFAGRTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYTFLLGSA
Sbjct: 181 KPFVITSWVELFAGRTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYTFLLGSA 240

Query: 241 HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENERVVFIIPGGLAEKLGSSYKV 300
           HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENERVVFIIPGGLAEKLGSSYKV
Sbjct: 241 HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENERVVFIIPGGLAEKLGSSYKV 300

Query: 301 DSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVASNV 360
           DSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVASNV
Sbjct: 301 DSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVASNV 360

Query: 361 QGSDEHLGIPDEHLSKPEVSIDHADSGSAGGHKTFRNSYSGVKMRNDKVDESDNSNIDII 420
           QGSDEHLGIPDEHLSKPEVSIDHADSGSAGGHKTFRNSYSGVKMRNDKVDESDNSNIDII
Sbjct: 361 QGSDEHLGIPDEHLSKPEVSIDHADSGSAGGHKTFRNSYSGVKMRNDKVDESDNSNIDII 420

Query: 421 FTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYPYKDNGDGRE 480
           FTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYPYKDNGDGRE
Sbjct: 421 FTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYPYKDNGDGRE 480

Query: 481 EIAESLKEERKRKEMEAISEDLFNNEKGRRRGMVGSLQQLLTRS 524
           EIAESLKEERKRKEMEAISEDLFNNEKGRRRGMVGSLQQLLTRS
Sbjct: 481 EIAESLKEERKRKEMEAISEDLFNNEKGRRRGMVGSLQQLLTRS 524

[Close]

BLAST of Csor.00g194880 vs. NCBI nr
Match: XP_022949548.1 (nijmegen breakage syndrome 1 protein [Cucurbita moschata])

HSP 1 Score: 1035 bits (2676), Expect = 0.0
Identity = 522/524 (99.62%), Postives = 523/524 (99.81%), Query Frame = 0


Query: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFLNSH 60
           MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFLNSH
Sbjct: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFLNSH 60

Query: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120
           KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF
Sbjct: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120

Query: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180
           SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE
Sbjct: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180

Query: 181 KPFVITSWVELFAGRTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYTFLLGSA 240
           KPFVITSWVELFAGRTSCNEIPCFDSY+PTMTVEGMHVKVVDPNTRKNCLSGYTFLLGSA
Sbjct: 181 KPFVITSWVELFAGRTSCNEIPCFDSYYPTMTVEGMHVKVVDPNTRKNCLSGYTFLLGSA 240

Query: 241 HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENERVVFIIPGGLAEKLGSSYKV 300
           HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENERVVFIIPGGLAEKLGSSYKV
Sbjct: 241 HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENERVVFIIPGGLAEKLGSSYKV 300

Query: 301 DSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVASNV 360
           DSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVASNV
Sbjct: 301 DSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVASNV 360

Query: 361 QGSDEHLGIPDEHLSKPEVSIDHADSGSAGGHKTFRNSYSGVKMRNDKVDESDNSNIDII 420
           QGSDEHLGIPDEHLSKPEVSIDHADSGSAGGHKTFRNSYSGVKMRNDKVDESDNSNIDII
Sbjct: 361 QGSDEHLGIPDEHLSKPEVSIDHADSGSAGGHKTFRNSYSGVKMRNDKVDESDNSNIDII 420

Query: 421 FTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYPYKDNGDGRE 480
           FTQNLIVQHVMKPSSIVTAED GITNFKRFRKTETHSGNSFYNLVPFDKYPYKDNGDGRE
Sbjct: 421 FTQNLIVQHVMKPSSIVTAEDSGITNFKRFRKTETHSGNSFYNLVPFDKYPYKDNGDGRE 480

Query: 481 EIAESLKEERKRKEMEAISEDLFNNEKGRRRGMVGSLQQLLTRS 524
           EIAESLKEERKRKEMEAISEDLFNNEKGRRRGMVGSLQQLLTRS
Sbjct: 481 EIAESLKEERKRKEMEAISEDLFNNEKGRRRGMVGSLQQLLTRS 524

[Close]

BLAST of Csor.00g194880 vs. NCBI nr
Match: XP_023521477.1 (nijmegen breakage syndrome 1 protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1020 bits (2637), Expect = 0.0
Identity = 518/531 (97.55%), Postives = 520/531 (97.93%), Query Frame = 0


Query: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFLNSH 60
           MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFLNSH
Sbjct: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFLNSH 60

Query: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120
           KSYLSNVSSKVRISDCSKYGTFVSR SGLKEKIHELPKKEASLYDGDVISFGSGNATYRF
Sbjct: 61  KSYLSNVSSKVRISDCSKYGTFVSRNSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120

Query: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180
           SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE
Sbjct: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180

Query: 181 KPFVITSWVELFAGRTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYTFLLGSA 240
           KPFVITSWVELFAGRTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYTFLLGSA
Sbjct: 181 KPFVITSWVELFAGRTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYTFLLGSA 240

Query: 241 HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENERVVFIIPGGLAEKLGSSYKV 300
           HMYK+GDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENERVVFIIPGGLAEKLGSSYKV
Sbjct: 241 HMYKHGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENERVVFIIPGGLAEKLGSSYKV 300

Query: 301 DSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVASNV 360
           DSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVASNV
Sbjct: 301 DSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVASNV 360

Query: 361 QGSDEHLGIPDEHLSKPE-------VSIDHADSGSAGGHKTFRNSYSGVKMRNDKVDESD 420
           QGSDEHLGIPDEHLSKPE       VSIDHA SGSAG HKTFRNSYSGVKMRNDKVDESD
Sbjct: 361 QGSDEHLGIPDEHLSKPEDYLSKPEVSIDHAASGSAGDHKTFRNSYSGVKMRNDKVDESD 420

Query: 421 NSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYPYK 480
           NSNIDIIFTQNLI QHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYPYK
Sbjct: 421 NSNIDIIFTQNLIAQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYPYK 480

Query: 481 DNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGMVGSLQQLLTRS 524
           DNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGMVGSLQ+LLTRS
Sbjct: 481 DNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGMVGSLQRLLTRS 531

[Close]

BLAST of Csor.00g194880 vs. NCBI nr
Match: XP_022998557.1 (nijmegen breakage syndrome 1 protein isoform X2 [Cucurbita maxima])

HSP 1 Score: 1018 bits (2631), Expect = 0.0
Identity = 516/531 (97.18%), Postives = 519/531 (97.74%), Query Frame = 0


Query: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFLNSH 60
           MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIF+NSH
Sbjct: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFINSH 60

Query: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120
           KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF
Sbjct: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120

Query: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180
           SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE
Sbjct: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180

Query: 181 KPFVITSWVELFAGRTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYTFLLGSA 240
           KPFVITSWVELFAG+TSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGY FLLGSA
Sbjct: 181 KPFVITSWVELFAGKTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYIFLLGSA 240

Query: 241 HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENERVVFIIPGGLAEKLGSSYKV 300
           HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENERVVFIIPGGLAEKLGSSYKV
Sbjct: 241 HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENERVVFIIPGGLAEKLGSSYKV 300

Query: 301 DSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVASNV 360
           DSYYKI ELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVASNV
Sbjct: 301 DSYYKIAELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVASNV 360

Query: 361 QGSDEHLGIPDEHLSKPE-------VSIDHADSGSAGGHKTFRNSYSGVKMRNDKVDESD 420
           QGSDEHLGIPDEHLSKPE       VSIDHA SGSAG HKTFRNSYSGVKMRND+VDESD
Sbjct: 361 QGSDEHLGIPDEHLSKPEDYLSKPEVSIDHAASGSAGDHKTFRNSYSGVKMRNDQVDESD 420

Query: 421 NSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYPYK 480
           NSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYPYK
Sbjct: 421 NSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYPYK 480

Query: 481 DNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGMVGSLQQLLTRS 524
           DNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGM GSLQQLLTRS
Sbjct: 481 DNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGMAGSLQQLLTRS 531

[Close]

BLAST of Csor.00g194880 vs. NCBI nr
Match: XP_022998556.1 (nijmegen breakage syndrome 1 protein isoform X1 [Cucurbita maxima])

HSP 1 Score: 1013 bits (2618), Expect = 0.0
Identity = 516/533 (96.81%), Postives = 519/533 (97.37%), Query Frame = 0


Query: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFLNSH 60
           MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIF+NSH
Sbjct: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFINSH 60

Query: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120
           KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF
Sbjct: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120

Query: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180
           SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE
Sbjct: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180

Query: 181 KPFVITSWVELFAGRTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYTFLLGSA 240
           KPFVITSWVELFAG+TSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGY FLLGSA
Sbjct: 181 KPFVITSWVELFAGKTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYIFLLGSA 240

Query: 241 HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQ--DFGNGENERVVFIIPGGLAEKLGSSY 300
           HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQ  DFGNGENERVVFIIPGGLAEKLGSSY
Sbjct: 241 HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQNEDFGNGENERVVFIIPGGLAEKLGSSY 300

Query: 301 KVDSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVAS 360
           KVDSYYKI ELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVAS
Sbjct: 301 KVDSYYKIAELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVAS 360

Query: 361 NVQGSDEHLGIPDEHLSKPE-------VSIDHADSGSAGGHKTFRNSYSGVKMRNDKVDE 420
           NVQGSDEHLGIPDEHLSKPE       VSIDHA SGSAG HKTFRNSYSGVKMRND+VDE
Sbjct: 361 NVQGSDEHLGIPDEHLSKPEDYLSKPEVSIDHAASGSAGDHKTFRNSYSGVKMRNDQVDE 420

Query: 421 SDNSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYP 480
           SDNSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYP
Sbjct: 421 SDNSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYP 480

Query: 481 YKDNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGMVGSLQQLLTRS 524
           YKDNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGM GSLQQLLTRS
Sbjct: 481 YKDNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGMAGSLQQLLTRS 533

[Close]

BLAST of Csor.00g194880 vs. ExPASy TrEMBL
Match: A0A6J1GCD8 (nijmegen breakage syndrome 1 protein OS=Cucurbita moschata OX=3662 GN=LOC111452863 PE=4 SV=1)

HSP 1 Score: 1035 bits (2676), Expect = 0.0
Identity = 522/524 (99.62%), Postives = 523/524 (99.81%), Query Frame = 0


Query: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFLNSH 60
           MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFLNSH
Sbjct: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFLNSH 60

Query: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120
           KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF
Sbjct: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120

Query: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180
           SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE
Sbjct: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180

Query: 181 KPFVITSWVELFAGRTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYTFLLGSA 240
           KPFVITSWVELFAGRTSCNEIPCFDSY+PTMTVEGMHVKVVDPNTRKNCLSGYTFLLGSA
Sbjct: 181 KPFVITSWVELFAGRTSCNEIPCFDSYYPTMTVEGMHVKVVDPNTRKNCLSGYTFLLGSA 240

Query: 241 HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENERVVFIIPGGLAEKLGSSYKV 300
           HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENERVVFIIPGGLAEKLGSSYKV
Sbjct: 241 HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENERVVFIIPGGLAEKLGSSYKV 300

Query: 301 DSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVASNV 360
           DSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVASNV
Sbjct: 301 DSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVASNV 360

Query: 361 QGSDEHLGIPDEHLSKPEVSIDHADSGSAGGHKTFRNSYSGVKMRNDKVDESDNSNIDII 420
           QGSDEHLGIPDEHLSKPEVSIDHADSGSAGGHKTFRNSYSGVKMRNDKVDESDNSNIDII
Sbjct: 361 QGSDEHLGIPDEHLSKPEVSIDHADSGSAGGHKTFRNSYSGVKMRNDKVDESDNSNIDII 420

Query: 421 FTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYPYKDNGDGRE 480
           FTQNLIVQHVMKPSSIVTAED GITNFKRFRKTETHSGNSFYNLVPFDKYPYKDNGDGRE
Sbjct: 421 FTQNLIVQHVMKPSSIVTAEDSGITNFKRFRKTETHSGNSFYNLVPFDKYPYKDNGDGRE 480

Query: 481 EIAESLKEERKRKEMEAISEDLFNNEKGRRRGMVGSLQQLLTRS 524
           EIAESLKEERKRKEMEAISEDLFNNEKGRRRGMVGSLQQLLTRS
Sbjct: 481 EIAESLKEERKRKEMEAISEDLFNNEKGRRRGMVGSLQQLLTRS 524

[Close]

BLAST of Csor.00g194880 vs. ExPASy TrEMBL
Match: A0A6J1K8B4 (nijmegen breakage syndrome 1 protein isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111493152 PE=4 SV=1)

HSP 1 Score: 1018 bits (2631), Expect = 0.0
Identity = 516/531 (97.18%), Postives = 519/531 (97.74%), Query Frame = 0


Query: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFLNSH 60
           MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIF+NSH
Sbjct: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFINSH 60

Query: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120
           KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF
Sbjct: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120

Query: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180
           SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE
Sbjct: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180

Query: 181 KPFVITSWVELFAGRTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYTFLLGSA 240
           KPFVITSWVELFAG+TSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGY FLLGSA
Sbjct: 181 KPFVITSWVELFAGKTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYIFLLGSA 240

Query: 241 HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENERVVFIIPGGLAEKLGSSYKV 300
           HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENERVVFIIPGGLAEKLGSSYKV
Sbjct: 241 HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENERVVFIIPGGLAEKLGSSYKV 300

Query: 301 DSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVASNV 360
           DSYYKI ELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVASNV
Sbjct: 301 DSYYKIAELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVASNV 360

Query: 361 QGSDEHLGIPDEHLSKPE-------VSIDHADSGSAGGHKTFRNSYSGVKMRNDKVDESD 420
           QGSDEHLGIPDEHLSKPE       VSIDHA SGSAG HKTFRNSYSGVKMRND+VDESD
Sbjct: 361 QGSDEHLGIPDEHLSKPEDYLSKPEVSIDHAASGSAGDHKTFRNSYSGVKMRNDQVDESD 420

Query: 421 NSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYPYK 480
           NSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYPYK
Sbjct: 421 NSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYPYK 480

Query: 481 DNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGMVGSLQQLLTRS 524
           DNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGM GSLQQLLTRS
Sbjct: 481 DNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGMAGSLQQLLTRS 531

[Close]

BLAST of Csor.00g194880 vs. ExPASy TrEMBL
Match: A0A6J1KAH4 (nijmegen breakage syndrome 1 protein isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493152 PE=4 SV=1)

HSP 1 Score: 1013 bits (2618), Expect = 0.0
Identity = 516/533 (96.81%), Postives = 519/533 (97.37%), Query Frame = 0


Query: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFLNSH 60
           MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIF+NSH
Sbjct: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFINSH 60

Query: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120
           KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF
Sbjct: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120

Query: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180
           SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE
Sbjct: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180

Query: 181 KPFVITSWVELFAGRTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYTFLLGSA 240
           KPFVITSWVELFAG+TSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGY FLLGSA
Sbjct: 181 KPFVITSWVELFAGKTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYIFLLGSA 240

Query: 241 HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQ--DFGNGENERVVFIIPGGLAEKLGSSY 300
           HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQ  DFGNGENERVVFIIPGGLAEKLGSSY
Sbjct: 241 HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQNEDFGNGENERVVFIIPGGLAEKLGSSY 300

Query: 301 KVDSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVAS 360
           KVDSYYKI ELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVAS
Sbjct: 301 KVDSYYKIAELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVAS 360

Query: 361 NVQGSDEHLGIPDEHLSKPE-------VSIDHADSGSAGGHKTFRNSYSGVKMRNDKVDE 420
           NVQGSDEHLGIPDEHLSKPE       VSIDHA SGSAG HKTFRNSYSGVKMRND+VDE
Sbjct: 361 NVQGSDEHLGIPDEHLSKPEDYLSKPEVSIDHAASGSAGDHKTFRNSYSGVKMRNDQVDE 420

Query: 421 SDNSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYP 480
           SDNSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYP
Sbjct: 421 SDNSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYP 480

Query: 481 YKDNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGMVGSLQQLLTRS 524
           YKDNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGM GSLQQLLTRS
Sbjct: 481 YKDNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGMAGSLQQLLTRS 533

[Close]

BLAST of Csor.00g194880 vs. ExPASy TrEMBL
Match: A0A1S3C596 (nijmegen breakage syndrome 1 protein isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496815 PE=4 SV=1)

HSP 1 Score: 868 bits (2242), Expect = 4.97e-315
Identity = 436/524 (83.21%), Postives = 474/524 (90.46%), Query Frame = 0


Query: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFLNSH 60
           MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTI KDKGVSRIHAEI+VDAMI LNSH
Sbjct: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTIAKDKGVSRIHAEILVDAMIPLNSH 60

Query: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120
            S+LSN+ SKVRISDCSKYGTFV R SGLKEK+HEL KKEASL DGDV+SFGSGNATYRF
Sbjct: 61  NSHLSNICSKVRISDCSKYGTFVRRNSGLKEKLHELSKKEASLCDGDVVSFGSGNATYRF 120

Query: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180
           SFVQL+FYV+ S SFQ QLLRDKVSSIGA TSHDI+ECTHVLVEELMPF+EALVDAIVAE
Sbjct: 121 SFVQLLFYVNRSESFQSQLLRDKVSSIGACTSHDIQECTHVLVEELMPFNEALVDAIVAE 180

Query: 181 KPFVITSWVELFAGRTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYTFLLGSA 240
           KPFV+TSWVELFAG+T+CNEIP FDSY PTMTVEGMHVKVVDP+TRKNCLSGYTFLLG  
Sbjct: 181 KPFVLTSWVELFAGKTTCNEIPSFDSYQPTMTVEGMHVKVVDPSTRKNCLSGYTFLLGLT 240

Query: 241 HMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENERVVFIIPGGLAEKLGSSYKV 300
            MYKYGDRLKMLLQQVGGANVLSIEDFSSDSQD GNGEN+RVVF++PGG  EK  SS KV
Sbjct: 241 QMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSVEKWDSSSKV 300

Query: 301 DSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPVASNV 360
           DSYYKITEL+LISSVLSG LDRDNLI PCEPGSSTCSTDETVVAESDLE ET KPV SNV
Sbjct: 301 DSYYKITELILISSVLSGTLDRDNLIHPCEPGSSTCSTDETVVAESDLETETSKPVVSNV 360

Query: 361 QGSDEHLGIPDEHLSKPEVSIDHADSGSAGGHKTFRNSYSGVKMRNDKVDESDNSNIDII 420
           QG DE+L   DE+LS+  VS+D+A +GS GGH+  +NS S ++MR DK++ESDN NIDII
Sbjct: 361 QGPDEYLSKSDEYLSRSLVSVDNATTGSLGGHEIVKNSSSDIEMRKDKINESDNRNIDII 420

Query: 421 FTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYPYKDNGDGRE 480
           F+QNLIVQH  K S++VTAE+ GITNFKRFRKT+THSGNSF NLVPFDKYPYKDNGDGRE
Sbjct: 421 FSQNLIVQHATKASTLVTAENSGITNFKRFRKTQTHSGNSFSNLVPFDKYPYKDNGDGRE 480

Query: 481 EIAESLKEERKRKEMEAISEDLFNNEKGRRRGMVGSLQQLLTRS 524
           EIAESLKEER+RKE EAI+EDLF+NEKGRRRGM GSLQ+L TRS
Sbjct: 481 EIAESLKEERRRKETEAIAEDLFHNEKGRRRGMAGSLQELFTRS 524

[Close]

BLAST of Csor.00g194880 vs. ExPASy TrEMBL
Match: A0A6J1CQ04 (nijmegen breakage syndrome 1 protein OS=Momordica charantia OX=3673 GN=LOC111013240 PE=4 SV=1)

HSP 1 Score: 867 bits (2241), Expect = 5.72e-315
Identity = 443/527 (84.06%), Postives = 475/527 (90.13%), Query Frame = 0


Query: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFLNSH 60
           MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFLNSH
Sbjct: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFLNSH 60

Query: 61  KSYLSNVSSKVRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATYRF 120
            SYLSNVSSKVRISDCSKYGTFVSR SGLKEKIHELPKKEASL DGDV+SFGSGNATYRF
Sbjct: 61  GSYLSNVSSKVRISDCSKYGTFVSRNSGLKEKIHELPKKEASLCDGDVVSFGSGNATYRF 120

Query: 121 SFVQLVFYVHHSVSFQFQLLRDKVSSIGASTSHDIRECTHVLVEELMPFDEALVDAIVAE 180
           SFV L+FYVH S SFQ QLLRDKVSSIGASTSHD  ECTHVLVEELM F+E L+DAI+AE
Sbjct: 121 SFVPLLFYVHCSESFQLQLLRDKVSSIGASTSHDSLECTHVLVEELMSFNEPLIDAIIAE 180

Query: 181 KPFVITSWVELFAGRTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYTFLLGSA 240
           KPFV++SWVELFAGRTSCNEIPC DSYHPTMTVEGMHVKVVDP TRKNCL GY FLLGS 
Sbjct: 181 KPFVLSSWVELFAGRTSCNEIPCTDSYHPTMTVEGMHVKVVDPKTRKNCLIGYIFLLGST 240

Query: 241 HM-YKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENERVVFIIPGGLAEKLGSSYK 300
           HM YKYGDRLKMLLQQVGGANV SIE FSSDS+D GNG+N+R+VF+ P G AEKL S YK
Sbjct: 241 HMKYKYGDRLKMLLQQVGGANVSSIEGFSSDSKDLGNGDNDRIVFVTPQGSAEKLDSFYK 300

Query: 301 VDSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAETDKPV--A 360
           VDSYYKI ELVLISS+LSGKLDRDNLISPCEPGSSTCSTDETVVAESDLE ET KPV  A
Sbjct: 301 VDSYYKINELVLISSILSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEVETAKPVDTA 360

Query: 361 SNVQGSDEHLGIPDEHLSKPEVSIDHADSGSAGGHKTFRNSYSGVKMRNDKVDESDNSNI 420
           SNVQ        PDE+LSKP+V +++A +GSAG H+TF++ YS V+ R DKV+ESDN N+
Sbjct: 361 SNVQR-------PDEYLSKPDVFVNNATTGSAGSHETFQDGYSSVETRKDKVNESDNRNL 420

Query: 421 DIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSGNSFYNLVPFDKYPYKDNGD 480
           DIIF QNLIV+HV +PS+IVTAEDGG+TNFKRFRKTET SGNSFYNLVPF KYPYKDNGD
Sbjct: 421 DIIFNQNLIVRHVTEPSTIVTAEDGGVTNFKRFRKTETQSGNSFYNLVPFAKYPYKDNGD 480

Query: 481 GREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGMVGSLQQLLTRS 524
           GREEIAESLKEERKRKE EAI+EDLF+NEKGRRRGMVGSLQ+L TRS
Sbjct: 481 GREEIAESLKEERKRKEKEAIAEDLFHNEKGRRRGMVGSLQELFTRS 520

[Close]

BLAST of Csor.00g194880 vs. TAIR 10
Match: AT3G02680.1 (nijmegen breakage syndrome 1 )

HSP 1 Score: 406.8 bits (1044), Expect = 2.7e-113
Identity = 236/546 (43.22%), Postives = 337/546 (61.72%), Query Frame = 0


Query: 1   MVWGFFPVDPLSGEEKFYIFAPGKYKVGRKGCDLTITKDKGVSRIHAEIVVDAMIFLNSH 60
           MVWG FPVDPLSGE+K+YIF+ G YKVGRKGCD+ I KDKGVSRIHAE+  DA     S 
Sbjct: 1   MVWGLFPVDPLSGEDKYYIFSKGIYKVGRKGCDIIINKDKGVSRIHAELTFDATTVSTSR 60

Query: 61  KSYLSNVSSK--VRISDCSKYGTFVSRKSGLKEKIHELPKKEASLYDGDVISFGSGNATY 120
           ++  S+ +S   +R+ DCSKYGTFV    G K+K+HEL  KE  L DGDVI+FG+G+A Y
Sbjct: 61  RNKSSSDTSSFVIRVKDCSKYGTFVKTDLGTKDKVHELSNKEKILQDGDVIAFGTGSAIY 120

Query: 121 RFSFVQLVFYV-HHSVSFQF-QLLRDKVSSIGASTSHDI-RECTHVLVEELMPFDEALVD 180
           R S + LVFY+   S +F+  Q ++D VSSIGA  S  +  ECTHVL+E  M  +EAL++
Sbjct: 121 RLSLIPLVFYLCPSSETFKVDQPVQDAVSSIGARISPTLSEECTHVLLEPRMQVNEALIN 180

Query: 181 AIVAEKPFVITSWVELFAGRTSCNEIPCFDSYHPTMTVEGMHVKVVDPNTRKNCLSGYTF 240
           AI+A+K  ++T+WV L A ++ C+EIP +  Y P++ VE   V V++ N R+ CL G+TF
Sbjct: 181 AILAKKTIILTNWVMLLAEKSICSEIPGYSQYRPSVMVEEALVDVLELNVREKCLEGFTF 240

Query: 241 LLGSAHMYKYGDRLKMLLQQVGGANVLSIEDFSSDSQDFGNGENERVVFIIPGGLAEKLG 300
           +L     Y++G     LL +V GA  ++IED SS SQD   GE  R++ +IP    +K G
Sbjct: 241 VLEPTDTYRFGCSFPSLL-EVCGAETVTIEDISSMSQDSQFGEINRMICVIPKSAGDKFG 300

Query: 301 SSYKVDSYYKITELVLISSVLSGKLDRDNLISPCEPGSSTCSTDETVVAESDLEAE---- 360
               +    ++ E+ L+ +V SG L   +LI P    SS+CSTDETVVA+S+ E E    
Sbjct: 301 RFKHLSLLSRVNEMDLVCAVFSGNLPSTSLIPPSVVISSSCSTDETVVADSEAEEEETTS 360

Query: 361 -------------TDKPVASNVQGSDEHLGIPDEHLSKPEVSIDHADSGSAGGHKTFRNS 420
                         +KP A  ++ S   +     +L++ + S++      + GH   +NS
Sbjct: 361 SVHMIDATEKAETPEKPAAIVIEDSPVTILEETSNLNEFK-SVNLLADTESRGHMDEKNS 420

Query: 421 YSGVKMRNDKVDESDNSNIDIIFTQNLIVQHVMKPSSIVTAEDGGITNFKRFRKTETHSG 480
              V +R D+ DE++    +II+TQ+LIV+ +     + +    G+ +FKRFRK     G
Sbjct: 421 SDSVTIRRDRNDEAETGKSEIIYTQDLIVRDLRSTRKVQSTGGEGVVDFKRFRKGNVTCG 480

Query: 481 NSFYNLVPFDKYPYKDNGDGREEIAESLKEERKRKEMEAISEDLFNNEKGRRRGMVGSLQ 525
           NSF +L+PF K PYK+      ++ + +KEE+KRK+MEAI+EDLF  EK R+RG  GS++
Sbjct: 481 NSFSSLIPFAKDPYKEYDSW--DVTDFMKEEKKRKQMEAIAEDLFKTEKARKRGTAGSIR 540

The following BLAST results are available for this feature:

BLAST of Csor.00g194880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0H8D7	3.8e-112	43.22	Nijmegen breakage syndrome 1 protein OS=Arabidopsis thaliana OX=3702 GN=NBS1 PE=...	[more]
Q7XD82	1.3e-88	36.19	Nijmegen breakage syndrome 1 protein OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
B8BHK8	7.3e-87	35.83	Nijmegen breakage syndrome 1 protein OS=Oryza sativa subsp. indica OX=39946 GN=N...	[more]
Q5I2W8	1.5e-07	26.12	Nibrin OS=Danio rerio OX=7955 GN=nbn PE=2 SV=2	[more]

BLAST of Csor.00g194880 vs. NCBI nr


Match Name	Identity	Description
KAG6607018.1	100.00	Nijmegen breakage syndrome 1 protein, partial [Cucurbita argyrosperma subsp. sor...	[more]
XP_022949548.1	99.62	nijmegen breakage syndrome 1 protein [Cucurbita moschata]	[more]
XP_023521477.1	97.55	nijmegen breakage syndrome 1 protein [Cucurbita pepo subsp. pepo]	[more]
XP_022998557.1	97.18	nijmegen breakage syndrome 1 protein isoform X2 [Cucurbita maxima]	[more]
XP_022998556.1	96.81	nijmegen breakage syndrome 1 protein isoform X1 [Cucurbita maxima]	[more]

BLAST of Csor.00g194880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GCD8	0.0	99.62	nijmegen breakage syndrome 1 protein OS=Cucurbita moschata OX=3662 GN=LOC1114528...	[more]
A0A6J1K8B4	0.0	97.18	nijmegen breakage syndrome 1 protein isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1KAH4	0.0	96.81	nijmegen breakage syndrome 1 protein isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A1S3C596	4.97e-315	83.21	nijmegen breakage syndrome 1 protein isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1CQ04	5.72e-315	84.06	nijmegen breakage syndrome 1 protein OS=Momordica charantia OX=3673 GN=LOC111013...	[more]

BLAST of Csor.00g194880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G02680.1	2.7e-113	43.22	nijmegen breakage syndrome 1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000253	Forkhead-associated (FHA) domain	PFAM	PF00498	FHA	coord: 25..112 e-value: 3.1E-11 score: 43.4
IPR000253	Forkhead-associated (FHA) domain	PROSITE	PS50006	FHA_DOMAIN	coord: 25..84 score: 9.580199
IPR000253	Forkhead-associated (FHA) domain	CDD	cd00060	FHA	coord: 2..121 e-value: 2.35837E-10 score: 55.4702
None	No IPR available	GENE3D	2.60.200.20		coord: 6..125 e-value: 2.4E-15 score: 58.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 347..370
IPR040227	Nibrin-related	PANTHER	PTHR12162	NIBRIN-RELATED	coord: 387..507 coord: 2..366
IPR008984	SMAD/FHA domain superfamily	SUPERFAMILY	49879	SMAD/FHA domain	coord: 13..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g194880.m01	Csor.00g194880.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006302	double-strand break repair
biological_process	GO:0007095	mitotic G2 DNA damage checkpoint signaling
cellular_component	GO:0030870	Mre11 complex
molecular_function	GO:0005515	protein binding