Csor.00g194770 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g194770
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr01: 1905233 .. 1905689 (+)
RNA-Seq ExpressionCsor.00g194770
SyntenyCsor.00g194770
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCAGCGGCGGTGATCATACCTGCCGCCATGGCGATCATGATTCTACTGCTCAACCCAACTACTTCCGATGCTCTTACATCTTTCAAACCACTCAACAATGACACTTCCGGTAAGCATAAACAATAAAAACTTGTAATTTACATAAAATTTGACCATAAATTATGAAACCCTTTATTTGTTTTTTGTGTTCGTGTTCAATTTGCGTGACCCAGCTGCCGGAAAGTACCTCATCGGAGACCAAGACATCGACTCAGAGTTTCTAATGGAATCGCACATCAGCCGGATCCTAGCAGGCTCCCAAAACTTCCAAACCAGCAAAACTAACGACGCCAACAAAGCTTCTGGCGGCGGCTGCGGGCGGCCGCCGCGTTATGACAGTTGCCTCGGCCAGAAATCAAACAATCCGCCGCCGGAAAATTGTGGGACCTTCAACCGCAATAATCCCTGTTAG

mRNA sequence

ATGGCTGCAGCGGCGGTGATCATACCTGCCGCCATGGCGATCATGATTCTACTGCTCAACCCAACTACTTCCGATGCTCTTACATCTTTCAAACCACTCAACAATGACACTTCCGCTGCCGGAAAGTACCTCATCGGAGACCAAGACATCGACTCAGAGTTTCTAATGGAATCGCACATCAGCCGGATCCTAGCAGGCTCCCAAAACTTCCAAACCAGCAAAACTAACGACGCCAACAAAGCTTCTGGCGGCGGCTGCGGGCGGCCGCCGCGTTATGACAGTTGCCTCGGCCAGAAATCAAACAATCCGCCGCCGGAAAATTGTGGGACCTTCAACCGCAATAATCCCTGTTAG

Coding sequence (CDS)

ATGGCTGCAGCGGCGGTGATCATACCTGCCGCCATGGCGATCATGATTCTACTGCTCAACCCAACTACTTCCGATGCTCTTACATCTTTCAAACCACTCAACAATGACACTTCCGCTGCCGGAAAGTACCTCATCGGAGACCAAGACATCGACTCAGAGTTTCTAATGGAATCGCACATCAGCCGGATCCTAGCAGGCTCCCAAAACTTCCAAACCAGCAAAACTAACGACGCCAACAAAGCTTCTGGCGGCGGCTGCGGGCGGCCGCCGCGTTATGACAGTTGCCTCGGCCAGAAATCAAACAATCCGCCGCCGGAAAATTGTGGGACCTTCAACCGCAATAATCCCTGTTAG

Protein sequence

MAAAAVIIPAAMAIMILLLNPTTSDALTSFKPLNNDTSAAGKYLIGDQDIDSEFLMESHISRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNNPC
Homology
BLAST of Csor.00g194770 vs. NCBI nr
Match: KAG6607029.1 (hypothetical protein SDJN03_00371, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036725.1 hypothetical protein SDJN02_00345, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 228 bits (581), Expect = 3.66e-75
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0

Query: 1   MAAAAVIIPAAMAIMILLLNPTTSDALTSFKPLNNDTSAAGKYLIGDQDIDSEFLMESHI 60
           MAAAAVIIPAAMAIMILLLNPTTSDALTSFKPLNNDTSAAGKYLIGDQDIDSEFLMESHI
Sbjct: 1   MAAAAVIIPAAMAIMILLLNPTTSDALTSFKPLNNDTSAAGKYLIGDQDIDSEFLMESHI 60

Query: 61  SRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117
           SRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNNPC
Sbjct: 61  SRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

BLAST of Csor.00g194770 vs. NCBI nr
Match: XP_022948338.1 (uncharacterized protein LOC111452044 [Cucurbita moschata])

HSP 1 Score: 227 bits (579), Expect = 7.39e-75
Identity = 116/117 (99.15%), Postives = 117/117 (100.00%), Query Frame = 0

Query: 1   MAAAAVIIPAAMAIMILLLNPTTSDALTSFKPLNNDTSAAGKYLIGDQDIDSEFLMESHI 60
           MAAAAVIIPAAMAIMILLLNPTTSDALTSFKPLNNDTSAAGKYLIGDQD+DSEFLMESHI
Sbjct: 1   MAAAAVIIPAAMAIMILLLNPTTSDALTSFKPLNNDTSAAGKYLIGDQDLDSEFLMESHI 60

Query: 61  SRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117
           SRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNNPC
Sbjct: 61  SRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

BLAST of Csor.00g194770 vs. NCBI nr
Match: XP_022998105.1 (uncharacterized protein LOC111492854 [Cucurbita maxima])

HSP 1 Score: 219 bits (558), Expect = 1.18e-71
Identity = 112/117 (95.73%), Postives = 116/117 (99.15%), Query Frame = 0

Query: 1   MAAAAVIIPAAMAIMILLLNPTTSDALTSFKPLNNDTSAAGKYLIGDQDIDSEFLMESHI 60
           MAAAAV+IPAAMAIMILLLNPT+SDALT+FKPLNNDTSAAGKYLIGDQDIDSEFLMESHI
Sbjct: 1   MAAAAVMIPAAMAIMILLLNPTSSDALTTFKPLNNDTSAAGKYLIGDQDIDSEFLMESHI 60

Query: 61  SRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117
           SRILAGSQ+FQTSKTNDANKASGGGC RPPRYDSCLGQKSNNPPPENCGTFNRNNPC
Sbjct: 61  SRILAGSQDFQTSKTNDANKASGGGCERPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

BLAST of Csor.00g194770 vs. NCBI nr
Match: XP_023523220.1 (uncharacterized protein LOC111787479 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 218 bits (554), Expect = 4.81e-71
Identity = 111/117 (94.87%), Postives = 112/117 (95.73%), Query Frame = 0

Query: 1   MAAAAVIIPAAMAIMILLLNPTTSDALTSFKPLNNDTSAAGKYLIGDQDIDSEFLMESHI 60
           MA AA +IPAAMAIMILLLNP  SDALTSFKPLNNDTSAAGKYLIGDQDIDSEFLMESHI
Sbjct: 1   MATAAAMIPAAMAIMILLLNPINSDALTSFKPLNNDTSAAGKYLIGDQDIDSEFLMESHI 60

Query: 61  SRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117
           SRILAGSQNFQTS TNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNNPC
Sbjct: 61  SRILAGSQNFQTSNTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

BLAST of Csor.00g194770 vs. NCBI nr
Match: TYK01622.1 (hypothetical protein E5676_scaffold451G002320 [Cucumis melo var. makuwa])

HSP 1 Score: 158 bits (399), Expect = 2.18e-47
Identity = 82/119 (68.91%), Postives = 100/119 (84.03%), Query Frame = 0

Query: 1   MAAAAVIIPAAMAIMILLLN-PTTSDALTSFKPL-NNDTSAAGKYLIGDQDIDSEFLMES 60
           M A+A +IPAA+  MILLLN P++ +ALT+F+PL +N TS   + ++G++D+D EF+MES
Sbjct: 1   MGASATMIPAAVVTMILLLNIPSSCEALTTFEPLLSNHTSYGEQLMVGEEDMDMEFIMES 60

Query: 61  HISRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117
           HISRILA SQNFQT+ T DANKASGGGCGRPPRYDSCLGQK NNPPP NCGT+NR NPC
Sbjct: 61  HISRILASSQNFQTTSTVDANKASGGGCGRPPRYDSCLGQKRNNPPPPNCGTYNRANPC 119

BLAST of Csor.00g194770 vs. ExPASy TrEMBL
Match: A0A6J1G927 (uncharacterized protein LOC111452044 OS=Cucurbita moschata OX=3662 GN=LOC111452044 PE=4 SV=1)

HSP 1 Score: 227 bits (579), Expect = 3.58e-75
Identity = 116/117 (99.15%), Postives = 117/117 (100.00%), Query Frame = 0

Query: 1   MAAAAVIIPAAMAIMILLLNPTTSDALTSFKPLNNDTSAAGKYLIGDQDIDSEFLMESHI 60
           MAAAAVIIPAAMAIMILLLNPTTSDALTSFKPLNNDTSAAGKYLIGDQD+DSEFLMESHI
Sbjct: 1   MAAAAVIIPAAMAIMILLLNPTTSDALTSFKPLNNDTSAAGKYLIGDQDLDSEFLMESHI 60

Query: 61  SRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117
           SRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNNPC
Sbjct: 61  SRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

BLAST of Csor.00g194770 vs. ExPASy TrEMBL
Match: A0A6J1KBP5 (uncharacterized protein LOC111492854 OS=Cucurbita maxima OX=3661 GN=LOC111492854 PE=4 SV=1)

HSP 1 Score: 219 bits (558), Expect = 5.71e-72
Identity = 112/117 (95.73%), Postives = 116/117 (99.15%), Query Frame = 0

Query: 1   MAAAAVIIPAAMAIMILLLNPTTSDALTSFKPLNNDTSAAGKYLIGDQDIDSEFLMESHI 60
           MAAAAV+IPAAMAIMILLLNPT+SDALT+FKPLNNDTSAAGKYLIGDQDIDSEFLMESHI
Sbjct: 1   MAAAAVMIPAAMAIMILLLNPTSSDALTTFKPLNNDTSAAGKYLIGDQDIDSEFLMESHI 60

Query: 61  SRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117
           SRILAGSQ+FQTSKTNDANKASGGGC RPPRYDSCLGQKSNNPPPENCGTFNRNNPC
Sbjct: 61  SRILAGSQDFQTSKTNDANKASGGGCERPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

BLAST of Csor.00g194770 vs. ExPASy TrEMBL
Match: A0A5D3BS53 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002320 PE=4 SV=1)

HSP 1 Score: 158 bits (399), Expect = 1.05e-47
Identity = 82/119 (68.91%), Postives = 100/119 (84.03%), Query Frame = 0

Query: 1   MAAAAVIIPAAMAIMILLLN-PTTSDALTSFKPL-NNDTSAAGKYLIGDQDIDSEFLMES 60
           M A+A +IPAA+  MILLLN P++ +ALT+F+PL +N TS   + ++G++D+D EF+MES
Sbjct: 1   MGASATMIPAAVVTMILLLNIPSSCEALTTFEPLLSNHTSYGEQLMVGEEDMDMEFIMES 60

Query: 61  HISRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117
           HISRILA SQNFQT+ T DANKASGGGCGRPPRYDSCLGQK NNPPP NCGT+NR NPC
Sbjct: 61  HISRILASSQNFQTTSTVDANKASGGGCGRPPRYDSCLGQKRNNPPPPNCGTYNRANPC 119

BLAST of Csor.00g194770 vs. ExPASy TrEMBL
Match: A0A0A0LCJ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298580 PE=4 SV=1)

HSP 1 Score: 147 bits (370), Expect = 2.75e-43
Identity = 76/119 (63.87%), Postives = 99/119 (83.19%), Query Frame = 0

Query: 1   MAAAAVIIPAAMAIMILLLN-PTTSDALTSFKPL-NNDTSAAGKYLIGDQDIDSEFLMES 60
           M A+A++IPAA+  MILLL+ P++ DALT+F+PL +N +S  GK ++G++D++ EFLMES
Sbjct: 1   MGASALMIPAAVVTMILLLHIPSSCDALTTFQPLLSNHSSYGGKLMMGEEDMELEFLMES 60

Query: 61  HISRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117
           HISRILA S+N+QT+ T +ANKASGGGC RPPRYDSCLG+K NNPPP NC  +NR NPC
Sbjct: 61  HISRILASSKNYQTASTTNANKASGGGCDRPPRYDSCLGKKRNNPPPPNCSPYNRANPC 119

BLAST of Csor.00g194770 vs. ExPASy TrEMBL
Match: A0A0A0L711 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298570 PE=4 SV=1)

HSP 1 Score: 138 bits (347), Expect = 8.96e-40
Identity = 73/117 (62.39%), Postives = 91/117 (77.78%), Query Frame = 0

Query: 3   AAAVIIPAAMAIMILLLNPTT-SDALTSFKPLNNDTSAA-GKYLIGDQDIDSEFLMESHI 62
           A A++IPAAMA+M+++L PT    ALTSFKPLNN TS    KY++ ++DI S F+MESHI
Sbjct: 4   APALMIPAAMAMMLMMLIPTACGGALTSFKPLNNHTSGGLVKYMVEEEDIKSNFVMESHI 63

Query: 63  SRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117
           SR+LA SQ+F+TS TN+A + S G C RPPRYDSCLG K N PPP+NC TFNR +PC
Sbjct: 64  SRMLADSQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNREHPC 120

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6607029.13.66e-75100.00hypothetical protein SDJN03_00371, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022948338.17.39e-7599.15uncharacterized protein LOC111452044 [Cucurbita moschata][more]
XP_022998105.11.18e-7195.73uncharacterized protein LOC111492854 [Cucurbita maxima][more]
XP_023523220.14.81e-7194.87uncharacterized protein LOC111787479 [Cucurbita pepo subsp. pepo][more]
TYK01622.12.18e-4768.91hypothetical protein E5676_scaffold451G002320 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
A0A6J1G9273.58e-7599.15uncharacterized protein LOC111452044 OS=Cucurbita moschata OX=3662 GN=LOC1114520... [more]
A0A6J1KBP55.71e-7295.73uncharacterized protein LOC111492854 OS=Cucurbita maxima OX=3661 GN=LOC111492854... [more]
A0A5D3BS531.05e-4768.91Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LCJ42.75e-4363.87Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298580 PE=4 SV=1[more]
A0A0A0L7118.96e-4062.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298570 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..117
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..80
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..117

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g194770.m01Csor.00g194770.m01mRNA