Csor.00g194440 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g194440
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	DNA ligase
Location	Csor_Chr01: 2073961 .. 2075832 (-)
RNA-Seq Expression	Csor.00g194440
Synteny	Csor.00g194440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCGAATCTTCCACCGCTAAACCCTTAGCAATCGACTCATCCCTCTCCTTCGTCACTGCCATTGAATCCTTTTCACGGCAATTGAATCTCTCTCTTCCTCCTCTGAAGCTCCCATTCCGGCCGCCTCCATTACCGGCCGATTTCCCCCAATCCAAACTCATTCCCAAATCCCGTTTCGTCGTCGACGCATTTTCTCACGCTGGTGAGTTCTCTGTTTCCTATTTCCTCTCCCATTTTCACTCCGATCACTATGCCGGTCTCTCCCCTACTTGGTGCAAGGGTATCATCTTCTGCTCTGATGTTACCGCCCGCCTTTTGCTTGAAGTTCTCAAAGTCCCGTTGCCGTTTGTTCAATCATTGCCGCTTCGGGAGCCTGTAGTAATCGATGGATGTGAGGTAATACTTATTGATGCCAACCATTGTCCTGGTGCGGTGCAGTTCTTGTTTAAGATTCCTAGTGCGGATGAAAAGTTTGAGAGATATATTCATACTGGGGATTTTCGGTTTTGTGATTCTATGATAATCGACCCTGTTTTGAAAACGTTTATTGGTTCGGATGCAGTTTTCTTGGACACTACTTATTGTAATCCGAAGTTTATTTTTCCTTCTCAGGATGAGTCTATTGAATATATTGTAAACATGATACAAAAAATTGGAGGTGAAAGTAAGGGTTCTATGGGGAGTGTTCTTTTCCTTATAGCAACTTATGTAATTGGTAAGGAAAAAATTTTGCTTCAAATTGCAAGTAGATGTAATCGTAAGATAATGGTGGATGCTAGGAAAATGACAGTTTTAAGGATTTTGGGGTATGGTGGTGAGAATGGGGTGTTTACTGAGCATGGAAGTGAAAGTGATGTTCATGTTGTTGGATGGAATGTTTTGGGTGAGAGCTGGCCTTATTTTAGGCCTAATTTTGAAAGAATGAATGATATAATGGTGGAAAAGGGGTATTCTAAGGTTGTTGGTTTTGTTCCAACAGGGTGGACTTATGAGATGAAACACAAGAACTTCTCAGTGAGGTCTAAGGATTCGCTTGAGATACATTTGGTGCCATATAGCGAACATTCAAACTACAATGAAATTAGGGAATTTGTTAAGTTTTTGAAGCCTAGAAGAATTGTTCCCACTGTAGGTTTGGATGTTGATAAACTTGATAGCAAGCATGCTGATAAGATTAGGAAGCATTTTGGTGGTTTAGTTGATGAAATGGCCAACAGAAAAGAATTCTTAAAAGGGTTTCATCGTGGAGAAATGAGTGATGGTATTGATGAAACTGCCACAATGACTGTAAATGAGGACTTGGAAGAGATGGAAACTGTATCAGAAACATGTGGTAGTAGTATGGCGTTGTCTTCTCTGCAAGAAGTTGGTTCTACCGATCAATCCGTGTTGAATGACGAGGAGCAGAAGAAGATTATCCAGGAACTTCGTGAGTGCTTGCCTGCATGGGTGACTCAGGATCAGATATTAGAGCTGATTAGCAGGTCTGGGAGAAATGTGGTTGATGCAGTTTCTAATTTCTATGAACAAGAAACTGAATTTTATGAACATATTGCTACTCTCCCGGACAACCTTCCCAAGTTCCAGGGCAAAGTTGTAGATAGCCCATTGCCATTTACTTTTCCTGCAAGAGATGATATTAAAAAGAATGTTTTCTTGGGAAATTTTGACATTTCTTCAGGCCAAGCTTCGAAGTCGTCCAGTCCAAGGGGCAAGACGACGACGACGAGCAAGAGCAAAGCTTCTCCTGGAAAAAGGAAGAGAAATCTTCAGGGTAAGCCGAAAAGTAAGTCGAAAAAGAATTCAAGTCTGCAATCTGATGGGTCAAAGCAATCTACAATCACAAAGTTCTTCGGGAAAGCTTGA

mRNA sequence

ATGGCTTCCGAATCTTCCACCGCTAAACCCTTAGCAATCGACTCATCCCTCTCCTTCGTCACTGCCATTGAATCCTTTTCACGGCAATTGAATCTCTCTCTTCCTCCTCTGAAGCTCCCATTCCGGCCGCCTCCATTACCGGCCGATTTCCCCCAATCCAAACTCATTCCCAAATCCCGTTTCGTCGTCGACGCATTTTCTCACGCTGGTGAGTTCTCTGTTTCCTATTTCCTCTCCCATTTTCACTCCGATCACTATGCCGGTCTCTCCCCTACTTGGTGCAAGGGTATCATCTTCTGCTCTGATGTTACCGCCCGCCTTTTGCTTGAAGTTCTCAAAGTCCCGTTGCCGTTTGTTCAATCATTGCCGCTTCGGGAGCCTGTAGTAATCGATGGATGTGAGGTAATACTTATTGATGCCAACCATTGTCCTGGTGCGGTGCAGTTCTTGTTTAAGATTCCTAGTGCGGATGAAAAGTTTGAGAGATATATTCATACTGGGGATTTTCGGTTTTGTGATTCTATGATAATCGACCCTGTTTTGAAAACGTTTATTGGTTCGGATGCAGTTTTCTTGGACACTACTTATTGTAATCCGAAGTTTATTTTTCCTTCTCAGGATGAGTCTATTGAATATATTGTAAACATGATACAAAAAATTGGAGGTGAAAGTAAGGGTTCTATGGGGAGTGTTCTTTTCCTTATAGCAACTTATGTAATTGGTAAGGAAAAAATTTTGCTTCAAATTGCAAGTAGATGTAATCGTAAGATAATGGTGGATGCTAGGAAAATGACAGTTTTAAGGATTTTGGGGTATGGTGGTGAGAATGGGGTGTTTACTGAGCATGGAAGTGAAAGTGATGTTCATGTTGTTGGATGGAATGTTTTGGGTGAGAGCTGGCCTTATTTTAGGCCTAATTTTGAAAGAATGAATGATATAATGGTGGAAAAGGGGTATTCTAAGGTTGTTGGTTTTGTTCCAACAGGGTGGACTTATGAGATGAAACACAAGAACTTCTCAGTGAGGTCTAAGGATTCGCTTGAGATACATTTGGTGCCATATAGCGAACATTCAAACTACAATGAAATTAGGGAATTTGTTAAGTTTTTGAAGCCTAGAAGAATTGTTCCCACTGTAGGTTTGGATGTTGATAAACTTGATAGCAAGCATGCTGATAAGATTAGGAAGCATTTTGGTGGTTTAGTTGATGAAATGGCCAACAGAAAAGAATTCTTAAAAGGGTTTCATCGTGGAGAAATGAGTGATGGTATTGATGAAACTGCCACAATGACTGTAAATGAGGACTTGGAAGAGATGGAAACTGTATCAGAAACATGTGGTAGTAGTATGGCGTTGTCTTCTCTGCAAGAAGTTGGTTCTACCGATCAATCCGTGTTGAATGACGAGGAGCAGAAGAAGATTATCCAGGAACTTCGTGAGTGCTTGCCTGCATGGGTGACTCAGGATCAGATATTAGAGCTGATTAGCAGGTCTGGGAGAAATGTGGTTGATGCAGTTTCTAATTTCTATGAACAAGAAACTGAATTTTATGAACATATTGCTACTCTCCCGGACAACCTTCCCAAGTTCCAGGGCAAAGTTGTAGATAGCCCATTGCCATTTACTTTTCCTGCAAGAGATGATATTAAAAAGAATGTTTTCTTGGGAAATTTTGACATTTCTTCAGGCCAAGCTTCGAAGTCGTCCAGTCCAAGGGGCAAGACGACGACGACGAGCAAGAGCAAAGCTTCTCCTGGAAAAAGGAAGAGAAATCTTCAGGGTAAGCCGAAAAGTAAGTCGAAAAAGAATTCAAGTCTGCAATCTGATGGGTCAAAGCAATCTACAATCACAAAGTTCTTCGGGAAAGCTTGA

Coding sequence (CDS)

ATGGCTTCCGAATCTTCCACCGCTAAACCCTTAGCAATCGACTCATCCCTCTCCTTCGTCACTGCCATTGAATCCTTTTCACGGCAATTGAATCTCTCTCTTCCTCCTCTGAAGCTCCCATTCCGGCCGCCTCCATTACCGGCCGATTTCCCCCAATCCAAACTCATTCCCAAATCCCGTTTCGTCGTCGACGCATTTTCTCACGCTGGTGAGTTCTCTGTTTCCTATTTCCTCTCCCATTTTCACTCCGATCACTATGCCGGTCTCTCCCCTACTTGGTGCAAGGGTATCATCTTCTGCTCTGATGTTACCGCCCGCCTTTTGCTTGAAGTTCTCAAAGTCCCGTTGCCGTTTGTTCAATCATTGCCGCTTCGGGAGCCTGTAGTAATCGATGGATGTGAGGTAATACTTATTGATGCCAACCATTGTCCTGGTGCGGTGCAGTTCTTGTTTAAGATTCCTAGTGCGGATGAAAAGTTTGAGAGATATATTCATACTGGGGATTTTCGGTTTTGTGATTCTATGATAATCGACCCTGTTTTGAAAACGTTTATTGGTTCGGATGCAGTTTTCTTGGACACTACTTATTGTAATCCGAAGTTTATTTTTCCTTCTCAGGATGAGTCTATTGAATATATTGTAAACATGATACAAAAAATTGGAGGTGAAAGTAAGGGTTCTATGGGGAGTGTTCTTTTCCTTATAGCAACTTATGTAATTGGTAAGGAAAAAATTTTGCTTCAAATTGCAAGTAGATGTAATCGTAAGATAATGGTGGATGCTAGGAAAATGACAGTTTTAAGGATTTTGGGGTATGGTGGTGAGAATGGGGTGTTTACTGAGCATGGAAGTGAAAGTGATGTTCATGTTGTTGGATGGAATGTTTTGGGTGAGAGCTGGCCTTATTTTAGGCCTAATTTTGAAAGAATGAATGATATAATGGTGGAAAAGGGGTATTCTAAGGTTGTTGGTTTTGTTCCAACAGGGTGGACTTATGAGATGAAACACAAGAACTTCTCAGTGAGGTCTAAGGATTCGCTTGAGATACATTTGGTGCCATATAGCGAACATTCAAACTACAATGAAATTAGGGAATTTGTTAAGTTTTTGAAGCCTAGAAGAATTGTTCCCACTGTAGGTTTGGATGTTGATAAACTTGATAGCAAGCATGCTGATAAGATTAGGAAGCATTTTGGTGGTTTAGTTGATGAAATGGCCAACAGAAAAGAATTCTTAAAAGGGTTTCATCGTGGAGAAATGAGTGATGGTATTGATGAAACTGCCACAATGACTGTAAATGAGGACTTGGAAGAGATGGAAACTGTATCAGAAACATGTGGTAGTAGTATGGCGTTGTCTTCTCTGCAAGAAGTTGGTTCTACCGATCAATCCGTGTTGAATGACGAGGAGCAGAAGAAGATTATCCAGGAACTTCGTGAGTGCTTGCCTGCATGGGTGACTCAGGATCAGATATTAGAGCTGATTAGCAGGTCTGGGAGAAATGTGGTTGATGCAGTTTCTAATTTCTATGAACAAGAAACTGAATTTTATGAACATATTGCTACTCTCCCGGACAACCTTCCCAAGTTCCAGGGCAAAGTTGTAGATAGCCCATTGCCATTTACTTTTCCTGCAAGAGATGATATTAAAAAGAATGTTTTCTTGGGAAATTTTGACATTTCTTCAGGCCAAGCTTCGAAGTCGTCCAGTCCAAGGGGCAAGACGACGACGACGAGCAAGAGCAAAGCTTCTCCTGGAAAAAGGAAGAGAAATCTTCAGGGTAAGCCGAAAAGTAAGTCGAAAAAGAATTCAAGTCTGCAATCTGATGGGTCAAAGCAATCTACAATCACAAAGTTCTTCGGGAAAGCTTGA

Protein sequence

MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSRFVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQSLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYIHTGDFRFCDSMIIDPVLKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVIGKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSESDVHVVGWNVLGESWPYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNYNEIREFVKFLKPRRIVPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHRGEMSDGIDETATMTVNEDLEEMETVSETCGSSMALSSLQEVGSTDQSVLNDEEQKKIIQELRECLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIATLPDNLPKFQGKVVDSPLPFTFPARDDIKKNVFLGNFDISSGQASKSSSPRGKTTTTSKSKASPGKRKRNLQGKPKSKSKKNSSLQSDGSKQSTITKFFGKA

Homology

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BLAST of Csor.00g194440 vs. ExPASy Swiss-Prot
Match: F4HPZ9 (DNA ligase 6 OS=Arabidopsis thaliana OX=3702 GN=LIG6 PE=2 SV=1)

HSP 1 Score: 571.2 bits (1471), Expect = 1.4e-161
Identity = 317/629 (50.40%), Postives = 414/629 (65.82%), Query Frame = 0


Query: 3   SESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSRFV 62
           S S  ++ L ++++  + +AI S S Q     P    P          P SK IP + F+
Sbjct: 15  SNSDNSETLNLNTTKLYSSAISSISPQFPSPKPTSSCP--------SIPNSKRIPNTNFI 74

Query: 63  VDAFSHAGE-FSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQS 122
           VD F    +  SV++FLSHFHSDHY+GLS +W KGII+CS  TARL+ E+L+VP  FV +
Sbjct: 75  VDLFRLPHQSSSVAFFLSHFHSDHYSGLSSSWSKGIIYCSHKTARLVAEILQVPSQFVFA 134

Query: 123 LPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYIHTGDFRFCDSMIIDPVL 182
           LP+ + V IDG EV+LI+ANHCPGAVQFLFK+      FE+Y+HTGDFRFCD M  DP L
Sbjct: 135 LPMNQMVKIDGSEVVLIEANHCPGAVQFLFKVKLESSGFEKYVHTGDFRFCDEMRFDPFL 194

Query: 183 KTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVIG 242
             F+G D VFLDTTYCNPKF+FPSQ+ES+ Y+V++I KI  E       VLFL+ATYV+G
Sbjct: 195 NGFVGCDGVFLDTTYCNPKFVFPSQEESVGYVVSVIDKISEE------KVLFLVATYVVG 254

Query: 243 KEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSESDVHVVGWNVLGESWP 302
           KEKIL++IA RC RKI+VDARKM++L +LG  GE G+FTE  +ESDVHVVGWNVLGE+WP
Sbjct: 255 KEKILVEIARRCKRKIVVDARKMSMLSVLGC-GEEGMFTEDENESDVHVVGWNVLGETWP 314

Query: 303 YFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNYN 362
           YFRPNF +MN+IMVEKGY KVVGFVPTGWTYE+K   F+VR KDS+EIHLVPYSEHSNY+
Sbjct: 315 YFRPNFVKMNEIMVEKGYDKVVGFVPTGWTYEVKRNKFAVRFKDSMEIHLVPYSEHSNYD 374

Query: 363 EIREFVKFLKPRRIVPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHR---- 422
           E+REF+KFLKP+R++PTVG+D++K D K  +K++KHF GLVDEMAN+K+FL GF+R    
Sbjct: 375 ELREFIKFLKPKRVIPTVGVDIEKFDCKEVNKMQKHFSGLVDEMANKKDFLLGFYRQSYQ 434

Query: 423 -GEMSDGIDETATMTVNEDLEEMETVSETCGSSMALSSLQEVGSTDQSVLND---EEQKK 482
             E SD    + +  V E  EE +   E  G        + V S+   +L+D       +
Sbjct: 435 KNEKSDVDVVSHSAEVYE--EEEKNACEDGG--------ENVPSSRGPILHDTTPSSDSR 494

Query: 483 IIQELRECLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIATLPDNLPKFQGK 542
           ++ +LR+ LPAWVT++Q+L+LI +   N VD VSNFYE E E Y+  A+LP      Q  
Sbjct: 495 LLIKLRDSLPAWVTEEQMLDLIKKHAGNPVDIVSNFYEYEAELYKQ-ASLPTPSLNNQAV 554

Query: 543 VVDSPLPFTFPARDDIKKNVFLGNFDISSGQASKSSSPRGKTTTTSKSKASPGKRKRNLQ 602
           + D  +        D++ N   G       QA +      +    +K   SPGKR ++  
Sbjct: 555 LFDDDV-------TDLQPNPVKG--ICPDVQAIQKGFDLPRKMNLTKGTISPGKRGKSSG 608

Query: 603 GKPKSKSKKNSSLQSDGSKQSTITKFFGK 623
            K   K+KK+   +  G  Q T+ KFF K
Sbjct: 615 SKSNKKAKKDPKSKPVGPGQPTLFKFFNK 608

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BLAST of Csor.00g194440 vs. ExPASy Swiss-Prot
Match: Q6PJP8 (DNA cross-link repair 1A protein OS=Homo sapiens OX=9606 GN=DCLRE1A PE=1 SV=3)

HSP 1 Score: 209.5 bits (532), Expect = 1.1e-52
Identity = 124/341 (36.36%), Postives = 190/341 (55.72%), Query Frame = 0


Query: 51   PQSKLIPKSRFVVDAFSH-AGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLL 110
            P  K IP + F VDAF +   E   +YFL+HFHSDHYAGLS  +    ++CS++T  LL 
Sbjct: 702  PFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKHFTFP-VYCSEITGNLLK 761

Query: 111  EVLKVPLPFVQSLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYIHTGDF 170
              L V   ++  LPL    +++G +V+L+DANHCPGAV  LF +P+        +HTGDF
Sbjct: 762  NKLHVQEQYIHPLPLDTECIVNGVKVVLLDANHCPGAVMILFYLPNGTV----ILHTGDF 821

Query: 171  RFCDSMIIDPVLKTFIGSD----AVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESK 230
            R       DP ++  + +D     ++LDTTYC+P++ FPSQ E I + +N       E+ 
Sbjct: 822  R------ADPSMERSLLADQKVHMLYLDTTYCSPEYTFPSQQEVIRFAIN----TAFEAV 881

Query: 231  GSMGSVLFLIATYVIGKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSE 290
                  L +  TY IGKEK+ L IA     K+ +   K   L+ L     N + T     
Sbjct: 882  TLNPHALVVCGTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEINSLITTDMCS 941

Query: 291  SDVHVVGWNVLGESWPYFRPNFERMNDIMVEKG--YSKVVGFVPTGWTYEMKHKNFS--- 350
            S VH++         P  + NF+ +   + + G  Y++++ F PTGWT+  K    +   
Sbjct: 942  SLVHLL---------PMMQINFKGLQSHLKKCGGKYNQILAFRPTGWTHSNKFTRIADVI 1001

Query: 351  VRSKDSLEIHLVPYSEHSNYNEIREFVKFLKPRRIVPTVGL 382
             ++K ++ I+ +PYSEHS+Y E++ FV++LKP++I+PTV +
Sbjct: 1002 PQTKGNISIYGIPYSEHSSYLEMKRFVQWLKPQKIIPTVNV 1018

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BLAST of Csor.00g194440 vs. ExPASy Swiss-Prot
Match: Q9JIC3 (DNA cross-link repair 1A protein OS=Mus musculus OX=10090 GN=Dclre1a PE=1 SV=2)

HSP 1 Score: 208.4 bits (529), Expect = 2.4e-52
Identity = 120/337 (35.61%), Postives = 190/337 (56.38%), Query Frame = 0


Query: 51   PQSKLIPKSRFVVDAFSHAG-EFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLL 110
            P  K IP + F VDAF +   E   +YFL+HFHSDHYAGLS  + +  ++CS++T  LL 
Sbjct: 688  PFYKRIPGTGFTVDAFQYGEIEGCTAYFLTHFHSDHYAGLSKDFTRP-VYCSEITGNLLK 747

Query: 111  EVLKVPLPFVQSLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYIHTGDF 170
            + L+V   +++ LP+    V+D  +V+L+DANHCPGA   LF++P+        +HTGDF
Sbjct: 748  KKLRVQEQYIRQLPMDTECVVDSVKVVLLDANHCPGATMILFQLPNG----AVILHTGDF 807

Query: 171  RFCDSMIIDPVLKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMG 230
            R   SM    +    +    +FLDTTYC+P++ FPSQ E I++ +N       E+     
Sbjct: 808  RADPSMERSRLAGRKV--HTLFLDTTYCSPEYTFPSQQEVIQFAIN----TAFEAVTLNP 867

Query: 231  SVLFLIATYVIGKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSESDVH 290
              L +  TY IGKEK+ L IA     K+ +   K   L+ L     + + T    +S VH
Sbjct: 868  RALVVCGTYCIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEVSSLITTDMCDSLVH 927

Query: 291  VVGWNVLGESWPYFRPNFERMNDIMVEKG--YSKVVGFVPTGWTYE---MKHKNFSVRSK 350
            ++         P  + NF+ +   + + G  Y +++ F PTGWT+        +   +++
Sbjct: 928  LL---------PMMQINFKGLQSHLKKCGGKYDQILAFRPTGWTHSNNITSTADIIPQTR 987

Query: 351  DSLEIHLVPYSEHSNYNEIREFVKFLKPRRIVPTVGL 382
             ++ I+ +PYSEHS+Y E++ FV++LKP++I+PTV +
Sbjct: 988  GNISIYGIPYSEHSSYLEMKRFVQWLKPQKIIPTVNV 1004

[Close]

BLAST of Csor.00g194440 vs. ExPASy Swiss-Prot
Match: Q5QJC4 (DNA cross-link repair 1A protein OS=Gallus gallus OX=9031 GN=DCLRE1A PE=1 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.5e-51
Identity = 126/367 (34.33%), Postives = 196/367 (53.41%), Query Frame = 0


Query: 51  PQSKLIPKSRFVVDAFSHAG-EFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLL 110
           P  K IP + F VDAF +   E   +YFL+HFHSDHY GL+  +    ++C+ +T  L+ 
Sbjct: 631 PFYKKIPGTGFTVDAFQYGEIEGCTAYFLTHFHSDHYCGLTKNFVFP-LYCNKITGNLVK 690

Query: 111 EVLKVPLPFVQSLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYIHTGDF 170
             L+V   ++  LP+    +++G +V+L+DANHCPGA   LF +PS        +HTGDF
Sbjct: 691 SKLRVKEQYINVLPMDTECIVNGIKVLLLDANHCPGATMILFYLPSG----TAILHTGDF 750

Query: 171 RFCDSMIIDPVLKTFIGS--DAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGS 230
           R   SM   P L   IG     ++LDTTYC+P++ FPSQ E I++ VN       E    
Sbjct: 751 RADPSMERYPAL---IGQKIHTLYLDTTYCSPEYTFPSQQEVIQFAVN----TAFEMVTL 810

Query: 231 MGSVLFLIATYVIGKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSESD 290
               L +  TY IGKEK+ L IA     K  +   K   L+ L     N + T +   + 
Sbjct: 811 NPRTLVVCGTYSIGKEKVFLAIAEVLGSKASMSRDKYKTLQCLESAAVNSLITMNWDGTL 870

Query: 291 VHVVGWNVLGESWPYFRPNFERMNDIM--VEKGYSKVVGFVPTGWTYE---MKHKNFSVR 350
           +H++         P  + NF+ + D +    + + +V+ F PTGWTY    +   +   +
Sbjct: 871 LHIL---------PMMQINFKGLQDHLNKFSENFDQVLAFKPTGWTYSDSCLSVMDIKPQ 930

Query: 351 SKDSLEIHLVPYSEHSNYNEIREFVKFLKPRRIVPTVGLDVDKLDSKHADKIRKHFGGLV 410
           ++ ++ I+ +PYSEHS+Y E++ FV++LKP++I+PTV +     D +    + KHF   +
Sbjct: 931 TRGNITIYGIPYSEHSSYLEMKRFVQWLKPQKIIPTVNVG----DWRARSLMEKHFRDWM 972

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BLAST of Csor.00g194440 vs. ExPASy Swiss-Prot
Match: Q86KS1 (DNA cross-link repair 1 protein OS=Dictyostelium discoideum OX=44689 GN=dclre1 PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 7.6e-51
Identity = 121/350 (34.57%), Postives = 188/350 (53.71%), Query Frame = 0


Query: 38  KLPFRPPPLPADFPQSKLIPKSRFVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGI 97
           K P +   +P   P  K+I  + F+VD F +  E    YFL+HFHSDHY G++ TW  G 
Sbjct: 251 KTPTKEKKIP---PSFKVIDGTNFLVDGFQYKSEDFTHYFLTHFHSDHYVGITKTWSFGN 310

Query: 98  IFCSDVTARLLLEVLKVPLPFVQSLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSAD 157
           I+C++ T +L+   L V   ++      + + I G +V  +D+NHCPG+   LF IP  +
Sbjct: 311 IYCTEETGKLVSHKLGVDQRYIVKCEWNKLIEIQGVKVAFLDSNHCPGSALILFIIPLRN 370

Query: 158 EK-----FERYIHTGDFRFCDSMIIDPVLKTFIGSDAVFLDTTYCNPKFIFPSQDESIEY 217
           +       E  +HTGDFR+  SM   P+LK    S  ++LD TYC+P+++FP Q E I+ 
Sbjct: 371 KDGEIIGEESILHTGDFRYNQSMNNYPLLKGRTIS-KLYLDNTYCDPQYVFPPQPEIIKQ 430

Query: 218 IVNMIQKIGGESKGSMGSVLFLIATYVIGKEKILLQIASRCNRKIMVDARKMTVLRILGY 277
           + ++++      K + G  LFL  TYVIGKE+ILL+IA +  + + V   K  +L  L  
Sbjct: 431 VASIVR------KENDGETLFLFGTYVIGKERILLEIAKQEGKPVHVSNEKYAILCCLST 490

Query: 278 GGENGVFTEHGSESDVHVVGWNVLGESWPYFRPNFERMNDIMVEKGYSKVVGFVPTGWTY 337
             +   FT +   +    V  ++L         N   + D    K Y +V+GF PTGWT 
Sbjct: 491 CLDINKFTTNELITPFRAVTMSMLSYH------NMLSLLDSSNNK-YKRVIGFRPTGWT- 550

Query: 338 EMKHKNFSVRSKDSLEIHLVPYSEHSNYNEIREFVKFLKPRRIVPTVGLD 383
               K+ +  ++     + V YSEHS++NE+R+ +   +P +I+PTV  D
Sbjct: 551 -QAKKSITYLNRGPTTFYSVAYSEHSSFNELRDCIDHFRPTQIIPTVDCD 581

[Close]

BLAST of Csor.00g194440 vs. NCBI nr
Match: KAG6607062.1 (DNA ligase 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1219 bits (3155), Expect = 0.0
Identity = 623/623 (100.00%), Postives = 623/623 (100.00%), Query Frame = 0


Query: 1   MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR 60
           MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR
Sbjct: 1   MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR 60

Query: 61  FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ 120
           FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ
Sbjct: 61  FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ 120

Query: 121 SLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYIHTGDFRFCDSMIIDPV 180
           SLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYIHTGDFRFCDSMIIDPV
Sbjct: 121 SLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYIHTGDFRFCDSMIIDPV 180

Query: 181 LKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI 240
           LKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI
Sbjct: 181 LKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI 240

Query: 241 GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSESDVHVVGWNVLGESW 300
           GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSESDVHVVGWNVLGESW
Sbjct: 241 GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSESDVHVVGWNVLGESW 300

Query: 301 PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY 360
           PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY
Sbjct: 301 PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY 360

Query: 361 NEIREFVKFLKPRRIVPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHRGEM 420
           NEIREFVKFLKPRRIVPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHRGEM
Sbjct: 361 NEIREFVKFLKPRRIVPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHRGEM 420

Query: 421 SDGIDETATMTVNEDLEEMETVSETCGSSMALSSLQEVGSTDQSVLNDEEQKKIIQELRE 480
           SDGIDETATMTVNEDLEEMETVSETCGSSMALSSLQEVGSTDQSVLNDEEQKKIIQELRE
Sbjct: 421 SDGIDETATMTVNEDLEEMETVSETCGSSMALSSLQEVGSTDQSVLNDEEQKKIIQELRE 480

Query: 481 CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIATLPDNLPKFQGKVVDSPLP 540
           CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIATLPDNLPKFQGKVVDSPLP
Sbjct: 481 CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIATLPDNLPKFQGKVVDSPLP 540

Query: 541 FTFPARDDIKKNVFLGNFDISSGQASKSSSPRGKTTTTSKSKASPGKRKRNLQGKPKSKS 600
           FTFPARDDIKKNVFLGNFDISSGQASKSSSPRGKTTTTSKSKASPGKRKRNLQGKPKSKS
Sbjct: 541 FTFPARDDIKKNVFLGNFDISSGQASKSSSPRGKTTTTSKSKASPGKRKRNLQGKPKSKS 600

Query: 601 KKNSSLQSDGSKQSTITKFFGKA 623
           KKNSSLQSDGSKQSTITKFFGKA
Sbjct: 601 KKNSSLQSDGSKQSTITKFFGKA 623

[Close]

BLAST of Csor.00g194440 vs. NCBI nr
Match: KAG7011065.1 (DNA ligase 6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1195 bits (3091), Expect = 0.0
Identity = 613/624 (98.24%), Postives = 618/624 (99.04%), Query Frame = 0


Query: 1   MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR 60
           MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR
Sbjct: 1   MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR 60

Query: 61  FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ 120
           FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ
Sbjct: 61  FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ 120

Query: 121 SLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYIHTGDFRFCDSMIIDPV 180
           SLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERY+HTGDFRFCDSMIIDPV
Sbjct: 121 SLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYVHTGDFRFCDSMIIDPV 180

Query: 181 LKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI 240
           LKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI
Sbjct: 181 LKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI 240

Query: 241 GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSESDVHVVGWNVLGESW 300
           GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSESDVHVVGWNVLGESW
Sbjct: 241 GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSESDVHVVGWNVLGESW 300

Query: 301 PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY 360
           PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY
Sbjct: 301 PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY 360

Query: 361 NEIREFVKFLKPRRIVPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHRGEM 420
           NEIREFVKFLKPRR+VPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHRGEM
Sbjct: 361 NEIREFVKFLKPRRVVPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHRGEM 420

Query: 421 SDGIDETATMTVNEDLEEMETVSETCGSSMALSSLQEVGSTDQSVLNDEEQKKIIQELRE 480
           SDGIDETATMTVNEDLEEMETVSETCGSSM LSSLQEVGSTD+SVLNDEEQKKIIQELRE
Sbjct: 421 SDGIDETATMTVNEDLEEMETVSETCGSSMVLSSLQEVGSTDRSVLNDEEQKKIIQELRE 480

Query: 481 CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIATLPDNLPKFQGKVVDSPLP 540
           CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIA+LPDNLPKFQGKVVD P  
Sbjct: 481 CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIASLPDNLPKFQGKVVDRP-- 540

Query: 541 FTFPARDDIKKNVFLGNFDISSGQASKSSSPRGKTTTTS-KSKASPGKRKRNLQGKPKSK 600
           F FPARDDIKKNVFLGNFDISSGQASKSSSPRGKTTTT+ KSKASPGKRKRNLQGKPKSK
Sbjct: 541 FIFPARDDIKKNVFLGNFDISSGQASKSSSPRGKTTTTTTKSKASPGKRKRNLQGKPKSK 600

Query: 601 SKKNSSLQSDGSKQSTITKFFGKA 623
           SKKNSSLQSDGSKQSTITKFFGKA
Sbjct: 601 SKKNSSLQSDGSKQSTITKFFGKA 622

[Close]

BLAST of Csor.00g194440 vs. NCBI nr
Match: XP_023523509.1 (DNA ligase 6-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1191 bits (3082), Expect = 0.0
Identity = 609/623 (97.75%), Postives = 616/623 (98.88%), Query Frame = 0


Query: 1   MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR 60
           MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR
Sbjct: 1   MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR 60

Query: 61  FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ 120
           FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ
Sbjct: 61  FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ 120

Query: 121 SLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYIHTGDFRFCDSMIIDPV 180
           SLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERY+HTGDFRFCDSMIIDPV
Sbjct: 121 SLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYVHTGDFRFCDSMIIDPV 180

Query: 181 LKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI 240
           LKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI
Sbjct: 181 LKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI 240

Query: 241 GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSESDVHVVGWNVLGESW 300
           GKEKILLQIASRCNRKIMVDARKM VLRILGYGGE+GVFTEH +ESDVHVVGWNVLGE W
Sbjct: 241 GKEKILLQIASRCNRKIMVDARKMKVLRILGYGGESGVFTEHENESDVHVVGWNVLGEFW 300

Query: 301 PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY 360
           PYFRPNF+RMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY
Sbjct: 301 PYFRPNFDRMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY 360

Query: 361 NEIREFVKFLKPRRIVPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHRGEM 420
           NEIREFVKFLKPRR+VPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHRGEM
Sbjct: 361 NEIREFVKFLKPRRVVPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHRGEM 420

Query: 421 SDGIDETATMTVNEDLEEMETVSETCGSSMALSSLQEVGSTDQSVLNDEEQKKIIQELRE 480
           SDGIDETATMTVNEDLEEMETVSETCGSSMALSSLQEVGSTD+SVLNDEEQKKIIQELRE
Sbjct: 421 SDGIDETATMTVNEDLEEMETVSETCGSSMALSSLQEVGSTDRSVLNDEEQKKIIQELRE 480

Query: 481 CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIATLPDNLPKFQGKVVDSPLP 540
           CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIATLPDNLPKFQGKVVDSPLP
Sbjct: 481 CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIATLPDNLPKFQGKVVDSPLP 540

Query: 541 FTFPARDDIKKNVFLGNFDISSGQASKSSSPRGKTTTTSKSKASPGKRKRNLQGKPKSKS 600
           FTFPARDDIKKNVFLGNFD+SSGQ SKSSSPRGK T  SKSKASPGKRKRNLQGKPKSKS
Sbjct: 541 FTFPARDDIKKNVFLGNFDVSSGQDSKSSSPRGKMT--SKSKASPGKRKRNLQGKPKSKS 600

Query: 601 KKNSSLQSDGSKQSTITKFFGKA 623
           KKNSSLQSDGSKQSTITKFFGKA
Sbjct: 601 KKNSSLQSDGSKQSTITKFFGKA 621

[Close]

BLAST of Csor.00g194440 vs. NCBI nr
Match: XP_022948738.1 (DNA ligase 6-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 1174 bits (3038), Expect = 0.0
Identity = 608/623 (97.59%), Postives = 610/623 (97.91%), Query Frame = 0


Query: 1   MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR 60
           MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR
Sbjct: 1   MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR 60

Query: 61  FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ 120
           FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ
Sbjct: 61  FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ 120

Query: 121 SLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYIHTGDFRFCDSMIIDPV 180
           SLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYIHTGDFRFCDSMIIDPV
Sbjct: 121 SLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYIHTGDFRFCDSMIIDPV 180

Query: 181 LKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI 240
           LKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI
Sbjct: 181 LKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI 240

Query: 241 GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSESDVHVVGWNVLGESW 300
           GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEH SESDVHVVGWNVLGESW
Sbjct: 241 GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHESESDVHVVGWNVLGESW 300

Query: 301 PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY 360
           PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY
Sbjct: 301 PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY 360

Query: 361 NEIREFVKFLKPRRIVPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHRGEM 420
           NEIREFVKFLKPRRIVPTVGLDVDKLDSKHADKIRKHF GLVDEMANRKEFLKGFHRGEM
Sbjct: 361 NEIREFVKFLKPRRIVPTVGLDVDKLDSKHADKIRKHFAGLVDEMANRKEFLKGFHRGEM 420

Query: 421 SDGIDETATMTVNEDLEEMETVSETCGSSMALSSLQEVGSTDQSVLNDEEQKKIIQELRE 480
           SD IDETATMTVNEDLEEMETVSETCGSSMALSSLQEVGSTD+SVLNDEEQKKIIQELRE
Sbjct: 421 SDDIDETATMTVNEDLEEMETVSETCGSSMALSSLQEVGSTDRSVLNDEEQKKIIQELRE 480

Query: 481 CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIATLPDNLPKFQGKVVDSPLP 540
           CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIA+LPDNLPKFQGKVVD P  
Sbjct: 481 CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIASLPDNLPKFQGKVVDRP-- 540

Query: 541 FTFPARDDIKKNVFLGNFDISSGQASKSSSPRGKTTTTSKSKASPGKRKRNLQGKPKSKS 600
           F FPARDDIKKNVFLGNFDISSGQASKSSSPRGKTTT  KSKASPGKRKRNLQGK    S
Sbjct: 541 FIFPARDDIKKNVFLGNFDISSGQASKSSSPRGKTTT--KSKASPGKRKRNLQGK----S 600

Query: 601 KKNSSLQSDGSKQSTITKFFGKA 623
           KKNSSLQSDGSKQSTITKFFGKA
Sbjct: 601 KKNSSLQSDGSKQSTITKFFGKA 615

[Close]

BLAST of Csor.00g194440 vs. NCBI nr
Match: XP_023523510.1 (DNA ligase 6-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1008 bits (2607), Expect = 0.0
Identity = 538/623 (86.36%), Postives = 544/623 (87.32%), Query Frame = 0


Query: 1   MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR 60
           MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR
Sbjct: 1   MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR 60

Query: 61  FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ 120
           FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ
Sbjct: 61  FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ 120

Query: 121 SLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYIHTGDFRFCDSMIIDPV 180
           SLPLREPVVIDGCE                                              
Sbjct: 121 SLPLREPVVIDGCE---------------------------------------------- 180

Query: 181 LKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI 240
                                     DESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI
Sbjct: 181 --------------------------DESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI 240

Query: 241 GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSESDVHVVGWNVLGESW 300
           GKEKILLQIASRCNRKIMVDARKM VLRILGYGGE+GVFTEH +ESDVHVVGWNVLGE W
Sbjct: 241 GKEKILLQIASRCNRKIMVDARKMKVLRILGYGGESGVFTEHENESDVHVVGWNVLGEFW 300

Query: 301 PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY 360
           PYFRPNF+RMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY
Sbjct: 301 PYFRPNFDRMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY 360

Query: 361 NEIREFVKFLKPRRIVPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHRGEM 420
           NEIREFVKFLKPRR+VPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHRGEM
Sbjct: 361 NEIREFVKFLKPRRVVPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHRGEM 420

Query: 421 SDGIDETATMTVNEDLEEMETVSETCGSSMALSSLQEVGSTDQSVLNDEEQKKIIQELRE 480
           SDGIDETATMTVNEDLEEMETVSETCGSSMALSSLQEVGSTD+SVLNDEEQKKIIQELRE
Sbjct: 421 SDGIDETATMTVNEDLEEMETVSETCGSSMALSSLQEVGSTDRSVLNDEEQKKIIQELRE 480

Query: 481 CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIATLPDNLPKFQGKVVDSPLP 540
           CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIATLPDNLPKFQGKVVDSPLP
Sbjct: 481 CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIATLPDNLPKFQGKVVDSPLP 540

Query: 541 FTFPARDDIKKNVFLGNFDISSGQASKSSSPRGKTTTTSKSKASPGKRKRNLQGKPKSKS 600
           FTFPARDDIKKNVFLGNFD+SSGQ SKSSSPRGK T  SKSKASPGKRKRNLQGKPKSKS
Sbjct: 541 FTFPARDDIKKNVFLGNFDVSSGQDSKSSSPRGKMT--SKSKASPGKRKRNLQGKPKSKS 549

Query: 601 KKNSSLQSDGSKQSTITKFFGKA 623
           KKNSSLQSDGSKQSTITKFFGKA
Sbjct: 601 KKNSSLQSDGSKQSTITKFFGKA 549

[Close]

BLAST of Csor.00g194440 vs. ExPASy TrEMBL
Match: A0A6J1GA61 (DNA ligase 6-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452317 PE=4 SV=1)

HSP 1 Score: 1174 bits (3038), Expect = 0.0
Identity = 608/623 (97.59%), Postives = 610/623 (97.91%), Query Frame = 0


Query: 1   MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR 60
           MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR
Sbjct: 1   MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR 60

Query: 61  FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ 120
           FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ
Sbjct: 61  FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ 120

Query: 121 SLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYIHTGDFRFCDSMIIDPV 180
           SLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYIHTGDFRFCDSMIIDPV
Sbjct: 121 SLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYIHTGDFRFCDSMIIDPV 180

Query: 181 LKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI 240
           LKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI
Sbjct: 181 LKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI 240

Query: 241 GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSESDVHVVGWNVLGESW 300
           GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEH SESDVHVVGWNVLGESW
Sbjct: 241 GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHESESDVHVVGWNVLGESW 300

Query: 301 PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY 360
           PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY
Sbjct: 301 PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY 360

Query: 361 NEIREFVKFLKPRRIVPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHRGEM 420
           NEIREFVKFLKPRRIVPTVGLDVDKLDSKHADKIRKHF GLVDEMANRKEFLKGFHRGEM
Sbjct: 361 NEIREFVKFLKPRRIVPTVGLDVDKLDSKHADKIRKHFAGLVDEMANRKEFLKGFHRGEM 420

Query: 421 SDGIDETATMTVNEDLEEMETVSETCGSSMALSSLQEVGSTDQSVLNDEEQKKIIQELRE 480
           SD IDETATMTVNEDLEEMETVSETCGSSMALSSLQEVGSTD+SVLNDEEQKKIIQELRE
Sbjct: 421 SDDIDETATMTVNEDLEEMETVSETCGSSMALSSLQEVGSTDRSVLNDEEQKKIIQELRE 480

Query: 481 CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIATLPDNLPKFQGKVVDSPLP 540
           CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIA+LPDNLPKFQGKVVD P  
Sbjct: 481 CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIASLPDNLPKFQGKVVDRP-- 540

Query: 541 FTFPARDDIKKNVFLGNFDISSGQASKSSSPRGKTTTTSKSKASPGKRKRNLQGKPKSKS 600
           F FPARDDIKKNVFLGNFDISSGQASKSSSPRGKTTT  KSKASPGKRKRNLQGK    S
Sbjct: 541 FIFPARDDIKKNVFLGNFDISSGQASKSSSPRGKTTT--KSKASPGKRKRNLQGK----S 600

Query: 601 KKNSSLQSDGSKQSTITKFFGKA 623
           KKNSSLQSDGSKQSTITKFFGKA
Sbjct: 601 KKNSSLQSDGSKQSTITKFFGKA 615

[Close]

BLAST of Csor.00g194440 vs. ExPASy TrEMBL
Match: A0A6J1GAT6 (DNA ligase 6-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452317 PE=4 SV=1)

HSP 1 Score: 991 bits (2562), Expect = 0.0
Identity = 536/623 (86.04%), Postives = 538/623 (86.36%), Query Frame = 0


Query: 1   MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR 60
           MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR
Sbjct: 1   MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR 60

Query: 61  FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ 120
           FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ
Sbjct: 61  FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ 120

Query: 121 SLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYIHTGDFRFCDSMIIDPV 180
           SLPLREPVVIDGCE                                              
Sbjct: 121 SLPLREPVVIDGCE---------------------------------------------- 180

Query: 181 LKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI 240
                                     DESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI
Sbjct: 181 --------------------------DESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI 240

Query: 241 GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSESDVHVVGWNVLGESW 300
           GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEH SESDVHVVGWNVLGESW
Sbjct: 241 GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHESESDVHVVGWNVLGESW 300

Query: 301 PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY 360
           PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY
Sbjct: 301 PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY 360

Query: 361 NEIREFVKFLKPRRIVPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHRGEM 420
           NEIREFVKFLKPRRIVPTVGLDVDKLDSKHADKIRKHF GLVDEMANRKEFLKGFHRGEM
Sbjct: 361 NEIREFVKFLKPRRIVPTVGLDVDKLDSKHADKIRKHFAGLVDEMANRKEFLKGFHRGEM 420

Query: 421 SDGIDETATMTVNEDLEEMETVSETCGSSMALSSLQEVGSTDQSVLNDEEQKKIIQELRE 480
           SD IDETATMTVNEDLEEMETVSETCGSSMALSSLQEVGSTD+SVLNDEEQKKIIQELRE
Sbjct: 421 SDDIDETATMTVNEDLEEMETVSETCGSSMALSSLQEVGSTDRSVLNDEEQKKIIQELRE 480

Query: 481 CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIATLPDNLPKFQGKVVDSPLP 540
           CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIA+LPDNLPKFQGKVVD P  
Sbjct: 481 CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIASLPDNLPKFQGKVVDRP-- 540

Query: 541 FTFPARDDIKKNVFLGNFDISSGQASKSSSPRGKTTTTSKSKASPGKRKRNLQGKPKSKS 600
           F FPARDDIKKNVFLGNFDISSGQASKSSSPRGKTTT  KSKASPGKRKRNLQGK    S
Sbjct: 541 FIFPARDDIKKNVFLGNFDISSGQASKSSSPRGKTTT--KSKASPGKRKRNLQGK----S 543

Query: 601 KKNSSLQSDGSKQSTITKFFGKA 623
           KKNSSLQSDGSKQSTITKFFGKA
Sbjct: 601 KKNSSLQSDGSKQSTITKFFGKA 543

[Close]

BLAST of Csor.00g194440 vs. ExPASy TrEMBL
Match: A0A6J1KFT7 (DNA ligase 6-like OS=Cucurbita maxima OX=3661 GN=LOC111492837 PE=4 SV=1)

HSP 1 Score: 989 bits (2557), Expect = 0.0
Identity = 530/623 (85.07%), Postives = 541/623 (86.84%), Query Frame = 0


Query: 1   MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR 60
           MASESSTAKPL IDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR
Sbjct: 1   MASESSTAKPLPIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR 60

Query: 61  FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ 120
           FVVDAFS+AGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ
Sbjct: 61  FVVDAFSYAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ 120

Query: 121 SLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYIHTGDFRFCDSMIIDPV 180
           SLPLREPVVIDGCE                                              
Sbjct: 121 SLPLREPVVIDGCE---------------------------------------------- 180

Query: 181 LKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI 240
                                     DESIEYIVN+IQKIGG+SKGSMGSVLFLIATYVI
Sbjct: 181 --------------------------DESIEYIVNIIQKIGGKSKGSMGSVLFLIATYVI 240

Query: 241 GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSESDVHVVGWNVLGESW 300
           GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGE+GVFTEH SESDVHVVGWNVLGE W
Sbjct: 241 GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGESGVFTEHESESDVHVVGWNVLGECW 300

Query: 301 PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY 360
           PYFRPNF+RMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY
Sbjct: 301 PYFRPNFDRMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY 360

Query: 361 NEIREFVKFLKPRRIVPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHRGEM 420
           NEIREFVKFLKPRRIVPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHRGEM
Sbjct: 361 NEIREFVKFLKPRRIVPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHRGEM 420

Query: 421 SDGIDETATMTVNEDLEEMETVSETCGSSMALSSLQEVGSTDQSVLNDEEQKKIIQELRE 480
           SD IDE+ATMTVNEDLEEMETVSETCG+SMALSSLQEVGSTD++VLNDEEQKKIIQELRE
Sbjct: 421 SDDIDESATMTVNEDLEEMETVSETCGTSMALSSLQEVGSTDRAVLNDEEQKKIIQELRE 480

Query: 481 CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIATLPDNLPKFQGKVVDSPLP 540
           CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIA+LPDNLPKFQGKVVD P  
Sbjct: 481 CLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIASLPDNLPKFQGKVVDRP-- 540

Query: 541 FTFPARDDIKKNVFLGNFDISSGQASKSSSPRGKTTTTSKSKASPGKRKRNLQGKPKSKS 600
           F FPARDDIKKNVFLGNFD+SSGQASKSSSPRGKTTT  KSKASPGKRKRNLQGKPKSKS
Sbjct: 541 FIFPARDDIKKNVFLGNFDVSSGQASKSSSPRGKTTT--KSKASPGKRKRNLQGKPKSKS 547

Query: 601 KKNSSLQSDGSKQSTITKFFGKA 623
           KKNSSLQSDGSKQSTITKFFGKA
Sbjct: 601 KKNSSLQSDGSKQSTITKFFGKA 547

[Close]

BLAST of Csor.00g194440 vs. ExPASy TrEMBL
Match: A0A5A7VEZ9 (DNA ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold548G00160 PE=3 SV=1)

HSP 1 Score: 964 bits (2492), Expect = 0.0
Identity = 504/635 (79.37%), Postives = 547/635 (86.14%), Query Frame = 0


Query: 1   MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR 60
           MASESST KPLAIDSSL FVTAIESFSRQLNLSLPPLKLPFRPPP P+DFPQSKLIP SR
Sbjct: 1   MASESSTPKPLAIDSSLCFVTAIESFSRQLNLSLPPLKLPFRPPPFPSDFPQSKLIPNSR 60

Query: 61  FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ 120
           FVVDAF HAG++S+SYFLSHFHSDHY GLSPTWCKGIIFCS +TARLLLEVLKVPLPFV 
Sbjct: 61  FVVDAFGHAGDYSLSYFLSHFHSDHYGGLSPTWCKGIIFCSHLTARLLLEVLKVPLPFVH 120

Query: 121 SLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYIHTGDFRFCDSMIIDPV 180
            LPLR+P  IDGCEVIL+DANHCPGAVQFLFKIP  D KFERY+HTGDFRF DSM +DPV
Sbjct: 121 PLPLRQPTTIDGCEVILVDANHCPGAVQFLFKIPCGDGKFERYVHTGDFRFFDSMRVDPV 180

Query: 181 LKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI 240
           L+ FIGSDAVFLDTTYCNPKF FPSQ+ESIEYIVN+IQ+ GG SKGSMG+VLFL+ATYVI
Sbjct: 181 LERFIGSDAVFLDTTYCNPKFSFPSQEESIEYIVNIIQQTGGASKGSMGNVLFLVATYVI 240

Query: 241 GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSESDVHVVGWNVLGESW 300
           GKEKILLQIASRCNRKIMVDARKMTVLR+LGYG E+GVFTEH SESDVHVVGWNVLGE+W
Sbjct: 241 GKEKILLQIASRCNRKIMVDARKMTVLRVLGYG-ESGVFTEHESESDVHVVGWNVLGETW 300

Query: 301 PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY 360
           P+FRPNF R+ DIMVEKGYSKVVGFVPTGWTYE+KH  FSVRSKDSLEIHLVPYSEHSNY
Sbjct: 301 PFFRPNFVRIKDIMVEKGYSKVVGFVPTGWTYELKHNKFSVRSKDSLEIHLVPYSEHSNY 360

Query: 361 NEIREFVKFLKPRRIVPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHRG-- 420
           NE+RE+VKFL+P+R+VPTVGLDVDKLDSKHADKI+KHF GLVDEMANRKEFLKGFHRG  
Sbjct: 361 NELREYVKFLRPKRVVPTVGLDVDKLDSKHADKIKKHFAGLVDEMANRKEFLKGFHRGSG 420

Query: 421 EMSDGIDETATMTVNE--DLEEMETVS--------ETCGSSMALSSLQEVGSTDQSVLND 480
           EMSD +DE AT    E  + EE E  S        +   S M LSSLQEVG T+    ND
Sbjct: 421 EMSDDVDENATKAETEFQEFEEKEISSCMNISVKTDASNSGMGLSSLQEVGCTNLFESND 480

Query: 481 EEQKKIIQELRECLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIATLPDNLP 540
            EQ+KIIQELRECLPAWVTQDQIL+LIS SGRNVVDAVSNFYE+ETEFYEH++TL D  P
Sbjct: 481 GEQQKIIQELRECLPAWVTQDQILDLISSSGRNVVDAVSNFYERETEFYEHVSTLTDICP 540

Query: 541 KFQGKVVDSPLPFTFPARDDIKKNVFLGNFDISSGQASKSSSPRGKTTTTSKSKASPGKR 600
           K+  K+ DSP  FTFPA D+ KK V LG  D SSG ASKSSSPRG    T+K+K SPGKR
Sbjct: 541 KYPSKISDSP--FTFPATDN-KKVVILGKVDTSSGHASKSSSPRG----TAKTKTSPGKR 600

Query: 601 KRNLQGKPKSKSKKNSSLQSDGSKQSTITKFFGKA 623
           KRN Q KPK+KS+KN SL S GSKQSTITKFF KA
Sbjct: 601 KRNFQDKPKNKSRKNLSLHSGGSKQSTITKFFRKA 627

[Close]

BLAST of Csor.00g194440 vs. ExPASy TrEMBL
Match: A0A1S3B9K7 (uncharacterized protein LOC103487505 isoform X6 OS=Cucumis melo OX=3656 GN=LOC103487505 PE=3 SV=1)

HSP 1 Score: 964 bits (2492), Expect = 0.0
Identity = 504/635 (79.37%), Postives = 547/635 (86.14%), Query Frame = 0


Query: 1   MASESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSR 60
           MASESST KPLAIDSSL FVTAIESFSRQLNLSLPPLKLPFRPPP P+DFPQSKLIP SR
Sbjct: 1   MASESSTPKPLAIDSSLCFVTAIESFSRQLNLSLPPLKLPFRPPPFPSDFPQSKLIPNSR 60

Query: 61  FVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQ 120
           FVVDAF HAG++S+SYFLSHFHSDHY GLSPTWCKGIIFCS +TARLLLEVLKVPLPFV 
Sbjct: 61  FVVDAFGHAGDYSLSYFLSHFHSDHYGGLSPTWCKGIIFCSHLTARLLLEVLKVPLPFVH 120

Query: 121 SLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYIHTGDFRFCDSMIIDPV 180
            LPLR+P  IDGCEVIL+DANHCPGAVQFLFKIP  D KFERY+HTGDFRF DSM +DPV
Sbjct: 121 PLPLRQPTTIDGCEVILVDANHCPGAVQFLFKIPCGDGKFERYVHTGDFRFFDSMRVDPV 180

Query: 181 LKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVI 240
           L+ FIGSDAVFLDTTYCNPKF FPSQ+ESIEYIVN+IQ+ GG SKGSMG+VLFL+ATYVI
Sbjct: 181 LERFIGSDAVFLDTTYCNPKFSFPSQEESIEYIVNIIQQTGGASKGSMGNVLFLVATYVI 240

Query: 241 GKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSESDVHVVGWNVLGESW 300
           GKEKILLQIASRCNRKIMVDARKMTVLR+LGYG E+GVFTEH SESDVHVVGWNVLGE+W
Sbjct: 241 GKEKILLQIASRCNRKIMVDARKMTVLRVLGYG-ESGVFTEHESESDVHVVGWNVLGETW 300

Query: 301 PYFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNY 360
           P+FRPNF R+ DIMVEKGYSKVVGFVPTGWTYE+KH  FSVRSKDSLEIHLVPYSEHSNY
Sbjct: 301 PFFRPNFVRIKDIMVEKGYSKVVGFVPTGWTYELKHNKFSVRSKDSLEIHLVPYSEHSNY 360

Query: 361 NEIREFVKFLKPRRIVPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHRG-- 420
           NE+RE+VKFL+P+R+VPTVGLDVDKLDSKHADKI+KHF GLVDEMANRKEFLKGFHRG  
Sbjct: 361 NELREYVKFLRPKRVVPTVGLDVDKLDSKHADKIKKHFAGLVDEMANRKEFLKGFHRGSG 420

Query: 421 EMSDGIDETATMTVNE--DLEEMETVS--------ETCGSSMALSSLQEVGSTDQSVLND 480
           EMSD +DE AT    E  + EE E  S        +   S M LSSLQEVG T+    ND
Sbjct: 421 EMSDDVDENATKAETEFQEFEEKEISSCMNISVKTDASNSGMGLSSLQEVGCTNLFESND 480

Query: 481 EEQKKIIQELRECLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIATLPDNLP 540
            EQ+KIIQELRECLPAWVTQDQIL+LIS SGRNVVDAVSNFYE+ETEFYEH++TL D  P
Sbjct: 481 GEQQKIIQELRECLPAWVTQDQILDLISSSGRNVVDAVSNFYERETEFYEHVSTLTDICP 540

Query: 541 KFQGKVVDSPLPFTFPARDDIKKNVFLGNFDISSGQASKSSSPRGKTTTTSKSKASPGKR 600
           K+  K+ DSP  FTFPA D+ KK V LG  D SSG ASKSSSPRG    T+K+K SPGKR
Sbjct: 541 KYPSKISDSP--FTFPATDN-KKVVILGKVDTSSGHASKSSSPRG----TAKTKTSPGKR 600

Query: 601 KRNLQGKPKSKSKKNSSLQSDGSKQSTITKFFGKA 623
           KRN Q KPK+KS+KN SL S GSKQSTITKFF KA
Sbjct: 601 KRNFQDKPKNKSRKNLSLHSGGSKQSTITKFFRKA 627

[Close]

BLAST of Csor.00g194440 vs. TAIR 10
Match: AT1G66730.1 (DNA LIGASE 6 )

HSP 1 Score: 571.2 bits (1471), Expect = 9.9e-163
Identity = 317/629 (50.40%), Postives = 414/629 (65.82%), Query Frame = 0


Query: 3   SESSTAKPLAIDSSLSFVTAIESFSRQLNLSLPPLKLPFRPPPLPADFPQSKLIPKSRFV 62
           S S  ++ L ++++  + +AI S S Q     P    P          P SK IP + F+
Sbjct: 15  SNSDNSETLNLNTTKLYSSAISSISPQFPSPKPTSSCP--------SIPNSKRIPNTNFI 74

Query: 63  VDAFSHAGE-FSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLEVLKVPLPFVQS 122
           VD F    +  SV++FLSHFHSDHY+GLS +W KGII+CS  TARL+ E+L+VP  FV +
Sbjct: 75  VDLFRLPHQSSSVAFFLSHFHSDHYSGLSSSWSKGIIYCSHKTARLVAEILQVPSQFVFA 134

Query: 123 LPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYIHTGDFRFCDSMIIDPVL 182
           LP+ + V IDG EV+LI+ANHCPGAVQFLFK+      FE+Y+HTGDFRFCD M  DP L
Sbjct: 135 LPMNQMVKIDGSEVVLIEANHCPGAVQFLFKVKLESSGFEKYVHTGDFRFCDEMRFDPFL 194

Query: 183 KTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSMGSVLFLIATYVIG 242
             F+G D VFLDTTYCNPKF+FPSQ+ES+ Y+V++I KI  E       VLFL+ATYV+G
Sbjct: 195 NGFVGCDGVFLDTTYCNPKFVFPSQEESVGYVVSVIDKISEE------KVLFLVATYVVG 254

Query: 243 KEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSESDVHVVGWNVLGESWP 302
           KEKIL++IA RC RKI+VDARKM++L +LG  GE G+FTE  +ESDVHVVGWNVLGE+WP
Sbjct: 255 KEKILVEIARRCKRKIVVDARKMSMLSVLGC-GEEGMFTEDENESDVHVVGWNVLGETWP 314

Query: 303 YFRPNFERMNDIMVEKGYSKVVGFVPTGWTYEMKHKNFSVRSKDSLEIHLVPYSEHSNYN 362
           YFRPNF +MN+IMVEKGY KVVGFVPTGWTYE+K   F+VR KDS+EIHLVPYSEHSNY+
Sbjct: 315 YFRPNFVKMNEIMVEKGYDKVVGFVPTGWTYEVKRNKFAVRFKDSMEIHLVPYSEHSNYD 374

Query: 363 EIREFVKFLKPRRIVPTVGLDVDKLDSKHADKIRKHFGGLVDEMANRKEFLKGFHR---- 422
           E+REF+KFLKP+R++PTVG+D++K D K  +K++KHF GLVDEMAN+K+FL GF+R    
Sbjct: 375 ELREFIKFLKPKRVIPTVGVDIEKFDCKEVNKMQKHFSGLVDEMANKKDFLLGFYRQSYQ 434

Query: 423 -GEMSDGIDETATMTVNEDLEEMETVSETCGSSMALSSLQEVGSTDQSVLND---EEQKK 482
             E SD    + +  V E  EE +   E  G        + V S+   +L+D       +
Sbjct: 435 KNEKSDVDVVSHSAEVYE--EEEKNACEDGG--------ENVPSSRGPILHDTTPSSDSR 494

Query: 483 IIQELRECLPAWVTQDQILELISRSGRNVVDAVSNFYEQETEFYEHIATLPDNLPKFQGK 542
           ++ +LR+ LPAWVT++Q+L+LI +   N VD VSNFYE E E Y+  A+LP      Q  
Sbjct: 495 LLIKLRDSLPAWVTEEQMLDLIKKHAGNPVDIVSNFYEYEAELYKQ-ASLPTPSLNNQAV 554

Query: 543 VVDSPLPFTFPARDDIKKNVFLGNFDISSGQASKSSSPRGKTTTTSKSKASPGKRKRNLQ 602
           + D  +        D++ N   G       QA +      +    +K   SPGKR ++  
Sbjct: 555 LFDDDV-------TDLQPNPVKG--ICPDVQAIQKGFDLPRKMNLTKGTISPGKRGKSSG 608

Query: 603 GKPKSKSKKNSSLQSDGSKQSTITKFFGK 623
            K   K+KK+   +  G  Q T+ KFF K
Sbjct: 615 SKSNKKAKKDPKSKPVGPGQPTLFKFFNK 608

[Close]

BLAST of Csor.00g194440 vs. TAIR 10
Match: AT3G26680.1 (DNA repair metallo-beta-lactamase family protein )

HSP 1 Score: 202.6 bits (514), Expect = 9.3e-52
Identity = 123/340 (36.18%), Postives = 182/340 (53.53%), Query Frame = 0


Query: 47  PADFPQSKLIPKSRFVVDAFSHAGEFSVS-YFLSHFHSDHYAGLSPTWCKGIIFCSDVTA 106
           P   P  K +P + F VDAF +      S YFL+HFH+DHY GL+  W  G I+CS +T+
Sbjct: 142 PRPCPFYKKLPGTPFTVDAFRYGCVQGCSAYFLTHFHADHYIGLTKAWSHGPIYCSSLTS 201

Query: 107 RLLLEVLKVPLPFVQSLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYIH 166
           RLL   L V    +  L L     I+G +V LI+ANHCPGA    F++         Y+H
Sbjct: 202 RLLRLSLSVNPSSIHPLELDVEYTINGIKVTLIEANHCPGAALIHFRLLDG----TCYLH 261

Query: 167 TGDFRFCDSMIIDPVLKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESK 226
           TGDFR    M   P+L        ++LDTTYCNP++ FPS+++ + Y+V    +I  +  
Sbjct: 262 TGDFRASKQMQTHPLLFN-QRVHVLYLDTTYCNPRYKFPSKEDVLSYVV----RITKDFL 321

Query: 227 GSMGSVLFLIATYVIGKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSE 286
                 L ++ +Y IGKE + L IA     KI  +A +  +L+  G+   +   +  G  
Sbjct: 322 RKQPKTLIVVGSYSIGKECVYLAIAKALGVKIFANASRRRILQSFGWDDISKNLSTDGKA 381

Query: 287 SDVHVVGWNVLGESWPYFRPNFERMNDIM--VEKGYSKVVGFVPTGWTYEMK---HKN-F 346
           + +HV+         P      ER+++ +    + Y  V+ F PTGWTY  K   H +  
Sbjct: 382 TCLHVL---------PMSSLKVERLDEHLKIYREQYGAVLAFRPTGWTYSEKIGEHLDLI 441

Query: 347 SVRSKDSLEIHLVPYSEHSNYNEIREFVKFLKPRRIVPTV 380
              S+  + I+ VPYSEHS++ E+REFV+FL+P +I+PTV
Sbjct: 442 KPTSRGKITIYGVPYSEHSSFTELREFVQFLRPDKIIPTV 463

[Close]

BLAST of Csor.00g194440 vs. TAIR 10
Match: AT3G26680.2 (DNA repair metallo-beta-lactamase family protein )

HSP 1 Score: 202.6 bits (514), Expect = 9.3e-52
Identity = 123/340 (36.18%), Postives = 182/340 (53.53%), Query Frame = 0


Query: 47  PADFPQSKLIPKSRFVVDAFSHAGEFSVS-YFLSHFHSDHYAGLSPTWCKGIIFCSDVTA 106
           P   P  K +P + F VDAF +      S YFL+HFH+DHY GL+  W  G I+CS +T+
Sbjct: 142 PRPCPFYKKLPGTPFTVDAFRYGCVQGCSAYFLTHFHADHYIGLTKAWSHGPIYCSSLTS 201

Query: 107 RLLLEVLKVPLPFVQSLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYIH 166
           RLL   L V    +  L L     I+G +V LI+ANHCPGA    F++         Y+H
Sbjct: 202 RLLRLSLSVNPSSIHPLELDVEYTINGIKVTLIEANHCPGAALIHFRLLDG----TCYLH 261

Query: 167 TGDFRFCDSMIIDPVLKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESK 226
           TGDFR    M   P+L        ++LDTTYCNP++ FPS+++ + Y+V    +I  +  
Sbjct: 262 TGDFRASKQMQTHPLLFN-QRVHVLYLDTTYCNPRYKFPSKEDVLSYVV----RITKDFL 321

Query: 227 GSMGSVLFLIATYVIGKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSE 286
                 L ++ +Y IGKE + L IA     KI  +A +  +L+  G+   +   +  G  
Sbjct: 322 RKQPKTLIVVGSYSIGKECVYLAIAKALGVKIFANASRRRILQSFGWDDISKNLSTDGKA 381

Query: 287 SDVHVVGWNVLGESWPYFRPNFERMNDIM--VEKGYSKVVGFVPTGWTYEMK---HKN-F 346
           + +HV+         P      ER+++ +    + Y  V+ F PTGWTY  K   H +  
Sbjct: 382 TCLHVL---------PMSSLKVERLDEHLKIYREQYGAVLAFRPTGWTYSEKIGEHLDLI 441

Query: 347 SVRSKDSLEIHLVPYSEHSNYNEIREFVKFLKPRRIVPTV 380
              S+  + I+ VPYSEHS++ E+REFV+FL+P +I+PTV
Sbjct: 442 KPTSRGKITIYGVPYSEHSSFTELREFVQFLRPDKIIPTV 463

[Close]

BLAST of Csor.00g194440 vs. TAIR 10
Match: AT3G26680.3 (DNA repair metallo-beta-lactamase family protein )

HSP 1 Score: 202.6 bits (514), Expect = 9.3e-52
Identity = 123/340 (36.18%), Postives = 182/340 (53.53%), Query Frame = 0


Query: 47  PADFPQSKLIPKSRFVVDAFSHAGEFSVS-YFLSHFHSDHYAGLSPTWCKGIIFCSDVTA 106
           P   P  K +P + F VDAF +      S YFL+HFH+DHY GL+  W  G I+CS +T+
Sbjct: 142 PRPCPFYKKLPGTPFTVDAFRYGCVQGCSAYFLTHFHADHYIGLTKAWSHGPIYCSSLTS 201

Query: 107 RLLLEVLKVPLPFVQSLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYIH 166
           RLL   L V    +  L L     I+G +V LI+ANHCPGA    F++         Y+H
Sbjct: 202 RLLRLSLSVNPSSIHPLELDVEYTINGIKVTLIEANHCPGAALIHFRLLDG----TCYLH 261

Query: 167 TGDFRFCDSMIIDPVLKTFIGSDAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESK 226
           TGDFR    M   P+L        ++LDTTYCNP++ FPS+++ + Y+V    +I  +  
Sbjct: 262 TGDFRASKQMQTHPLLFN-QRVHVLYLDTTYCNPRYKFPSKEDVLSYVV----RITKDFL 321

Query: 227 GSMGSVLFLIATYVIGKEKILLQIASRCNRKIMVDARKMTVLRILGYGGENGVFTEHGSE 286
                 L ++ +Y IGKE + L IA     KI  +A +  +L+  G+   +   +  G  
Sbjct: 322 RKQPKTLIVVGSYSIGKECVYLAIAKALGVKIFANASRRRILQSFGWDDISKNLSTDGKA 381

Query: 287 SDVHVVGWNVLGESWPYFRPNFERMNDIM--VEKGYSKVVGFVPTGWTYEMK---HKN-F 346
           + +HV+         P      ER+++ +    + Y  V+ F PTGWTY  K   H +  
Sbjct: 382 TCLHVL---------PMSSLKVERLDEHLKIYREQYGAVLAFRPTGWTYSEKIGEHLDLI 441

Query: 347 SVRSKDSLEIHLVPYSEHSNYNEIREFVKFLKPRRIVPTV 380
              S+  + I+ VPYSEHS++ E+REFV+FL+P +I+PTV
Sbjct: 442 KPTSRGKITIYGVPYSEHSSFTELREFVQFLRPDKIIPTV 463

[Close]

BLAST of Csor.00g194440 vs. TAIR 10
Match: AT2G45700.1 (sterile alpha motif (SAM) domain-containing protein )

HSP 1 Score: 201.8 bits (512), Expect = 1.6e-51
Identity = 123/340 (36.18%), Postives = 185/340 (54.41%), Query Frame = 0


Query: 51  PQSKLIPKSRFVVDAFSHAGEFSVSYFLSHFHSDHYAGLSPTWCKGIIFCSDVTARLLLE 110
           P    IP + F VDAF +       +FL+HFH DHY GL+ ++  G I+CS VTA+L+  
Sbjct: 393 PHWNCIPGTPFRVDAFKYLTRDCCHWFLTHFHLDHYQGLTKSFSHGKIYCSLVTAKLVNM 452

Query: 111 VLKVPLPFVQSLPLREPVVIDGCEVILIDANHCPGAVQFLFKIPSADEKFERYIHTGDFR 170
            + +P   +Q L L + V I G +V   DANHCPG++  LF+  +     +  +HTGDFR
Sbjct: 453 KIGIPWERLQVLDLGQKVNISGIDVTCFDANHCPGSIMILFEPANG----KAVLHTGDFR 512

Query: 171 FCDSMIIDPVLKTFIGS--DAVFLDTTYCNPKFIFPSQDESIEYIVNMIQKIGGESKGSM 230
           + + M         IGS   ++ LDTTYCNP++ FP Q+  I+++V  IQ      K   
Sbjct: 513 YSEEM-----SNWLIGSHISSLILDTTYCNPQYDFPKQEAVIQFVVEAIQAEAFNPK--- 572

Query: 231 GSVLFLIATYVIGKEKILLQIASRCNRKIMVDARKMTVLRILGYGGEN-GVFTEHGSESD 290
              LFLI +Y IGKE++ L++A     KI ++  K+ +L  LG+  ++   FT    ES 
Sbjct: 573 --TLFLIGSYTIGKERLFLEVARVLREKIYINPAKLKLLECLGFSKDDIQWFTVKEEESH 632

Query: 291 VHVVG-WNVLGESWPYFRPNFERMNDI--MVEKGYSKVVGFVPTGWTYEMKHKNFSVR-- 350
           +HVV  W +          +F+R+  +       YS +V F PTGWT     K    R  
Sbjct: 633 IHVVPLWTL---------ASFKRLKHVANRYTNRYSLIVAFSPTGWTSGKTKKKSPGRRL 692

Query: 351 SKDSLEIHLVPYSEHSNYNEIREFVKFLKPRRIVPTVGLD 383
            + ++  + VPYSEHS++ E++EFV+ + P  I+P+V  D
Sbjct: 693 QQGTIIRYEVPYSEHSSFTELKEFVQKVSPEVIIPSVNND 709

The following BLAST results are available for this feature:

BLAST of Csor.00g194440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4HPZ9	1.4e-161	50.40	DNA ligase 6 OS=Arabidopsis thaliana OX=3702 GN=LIG6 PE=2 SV=1	[more]
Q6PJP8	1.1e-52	36.36	DNA cross-link repair 1A protein OS=Homo sapiens OX=9606 GN=DCLRE1A PE=1 SV=3	[more]
Q9JIC3	2.4e-52	35.61	DNA cross-link repair 1A protein OS=Mus musculus OX=10090 GN=Dclre1a PE=1 SV=2	[more]
Q5QJC4	1.5e-51	34.33	DNA cross-link repair 1A protein OS=Gallus gallus OX=9031 GN=DCLRE1A PE=1 SV=1	[more]
Q86KS1	7.6e-51	34.57	DNA cross-link repair 1 protein OS=Dictyostelium discoideum OX=44689 GN=dclre1 P...	[more]

BLAST of Csor.00g194440 vs. NCBI nr


Match Name	Identity	Description
KAG6607062.1	100.00	DNA ligase 6, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7011065.1	98.24	DNA ligase 6, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023523509.1	97.75	DNA ligase 6-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022948738.1	97.59	DNA ligase 6-like isoform X1 [Cucurbita moschata]	[more]
XP_023523510.1	86.36	DNA ligase 6-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g194440 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1GA61	97.59	DNA ligase 6-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452317 PE=4 ...	[more]
A0A6J1GAT6	86.04	DNA ligase 6-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111452317 PE=4 ...	[more]
A0A6J1KFT7	85.07	DNA ligase 6-like OS=Cucurbita maxima OX=3661 GN=LOC111492837 PE=4 SV=1	[more]
A0A5A7VEZ9	79.37	DNA ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold548G00160 PE=...	[more]
A0A1S3B9K7	79.37	uncharacterized protein LOC103487505 isoform X6 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Csor.00g194440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G66730.1	9.9e-163	50.40	DNA LIGASE 6	[more]
AT3G26680.1	9.3e-52	36.18	DNA repair metallo-beta-lactamase family protein	[more]
AT3G26680.2	9.3e-52	36.18	DNA repair metallo-beta-lactamase family protein	[more]
AT3G26680.3	9.3e-52	36.18	DNA repair metallo-beta-lactamase family protein	[more]
AT2G45700.1	1.6e-51	36.18	sterile alpha motif (SAM) domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011084	DNA repair metallo-beta-lactamase	PFAM	PF07522	DRMBL	coord: 277..380 e-value: 1.0E-19 score: 70.8
IPR036866	Ribonuclease Z/Hydroxyacylglutathione hydrolase-like	GENE3D	3.60.15.10		coord: 56..379 e-value: 1.5E-84 score: 285.9
IPR036866	Ribonuclease Z/Hydroxyacylglutathione hydrolase-like	SUPERFAMILY	56281	Metallo-hydrolase/oxidoreductase	coord: 76..380
None	No IPR available	GENE3D	3.40.50.12650		coord: 202..357 e-value: 1.5E-84 score: 285.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 598..623
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 583..597
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 563..582
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 563..623
None	No IPR available	PANTHER	PTHR23240	DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED	coord: 5..622
None	No IPR available	PANTHER	PTHR23240:SF24	DNA LIGASE	coord: 5..622
None	No IPR available	CDD	cd16273	SNM1A-1C-like_MBL-fold	coord: 41..199 e-value: 2.80495E-70 score: 222.416

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g194440.m01	Csor.00g194440.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0006266	DNA ligation
biological_process	GO:0006310	DNA recombination
biological_process	GO:0006281	DNA repair
biological_process	GO:0006260	DNA replication
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003910	DNA ligase (ATP) activity