Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGATTGCGACTGAACCAACCATTCCCACAACCTCAACTCAGTCAAAACCTGTAGATTCCGAACAACAATCTGAAACTTCCGGCGCCGGCGAAACGACGGCGACCCCAGAACTTGAAACGCCCATAAACGGAACCCCAGATCGAGAGAAGAAGGGAAAAGGCCAAGACCAAATGGAAAGTTCGAAATGTGAGTGTAAAACGCCAACCCCTGATGAGAAAACAGAGGAAAAACAGAGGATTTTGGTCCCTGTTAATGGTTTGATGATGGATCGATTGAAGGTGCCGAAGAGCCCGAACGTGGCTGGAGAAGCTAAACAAAGAGGGGGCATTGCATTGCCCAAGAATGGTACTCCGAATCGGCTGAAAGTGCCGAAAGCATTCAAATATCACGAAAGGTAATGGCTTAGAAGTGTGAGTTTTTGGTGTCCGATGTGAAGAGTGTTGAATTTGAAAGTGGGGATTCGTTGTTGTAGGTATACAAGTCCGACGGATTTGATGATGTCGCCTATCACCAAAGGCCTTCTCGCCAGAACCAGGAAAGGGGCTGTCCCTTCCAAGGTTAGCTGTCTTCTTTCTCTTACTCTTTGTTATAATTTTTCATTCTTTTAGATTAAGATGTTTGAAGGGTTTTGTGTTCTTGTTCTGTTGATGCAGATGCATGAGCTCAGAATTTCAGAGATGAGTCTTCATAGCTGA
mRNA sequence
ATGGAGATTGCGACTGAACCAACCATTCCCACAACCTCAACTCAGTCAAAACCTGTAGATTCCGAACAACAATCTGAAACTTCCGGCGCCGGCGAAACGACGGCGACCCCAGAACTTGAAACGCCCATAAACGGAACCCCAGATCGAGAGAAGAAGGGAAAAGGCCAAGACCAAATGGAAAGTTCGAAATGTGAGTGTAAAACGCCAACCCCTGATGAGAAAACAGAGGAAAAACAGAGGATTTTGGTCCCTGTTAATGGTTTGATGATGGATCGATTGAAGGTGCCGAAGAGCCCGAACGTGGCTGGAGAAGCTAAACAAAGAGGGGGCATTGCATTGCCCAAGAATGGTACTCCGAATCGGCTGAAAGTGCCGAAAGCATTCAAATATCACGAAAGGTATACAAGTCCGACGGATTTGATGATGTCGCCTATCACCAAAGGCCTTCTCGCCAGAACCAGGAAAGGGGCTGTCCCTTCCAAGATGCATGAGCTCAGAATTTCAGAGATGAGTCTTCATAGCTGA
Coding sequence (CDS)
ATGGAGATTGCGACTGAACCAACCATTCCCACAACCTCAACTCAGTCAAAACCTGTAGATTCCGAACAACAATCTGAAACTTCCGGCGCCGGCGAAACGACGGCGACCCCAGAACTTGAAACGCCCATAAACGGAACCCCAGATCGAGAGAAGAAGGGAAAAGGCCAAGACCAAATGGAAAGTTCGAAATGTGAGTGTAAAACGCCAACCCCTGATGAGAAAACAGAGGAAAAACAGAGGATTTTGGTCCCTGTTAATGGTTTGATGATGGATCGATTGAAGGTGCCGAAGAGCCCGAACGTGGCTGGAGAAGCTAAACAAAGAGGGGGCATTGCATTGCCCAAGAATGGTACTCCGAATCGGCTGAAAGTGCCGAAAGCATTCAAATATCACGAAAGGTATACAAGTCCGACGGATTTGATGATGTCGCCTATCACCAAAGGCCTTCTCGCCAGAACCAGGAAAGGGGCTGTCCCTTCCAAGATGCATGAGCTCAGAATTTCAGAGATGAGTCTTCATAGCTGA
Protein sequence
MEIATEPTIPTTSTQSKPVDSEQQSETSGAGETTATPELETPINGTPDREKKGKGQDQMESSKCECKTPTPDEKTEEKQRILVPVNGLMMDRLKVPKSPNVAGEAKQRGGIALPKNGTPNRLKVPKAFKYHERYTSPTDLMMSPITKGLLARTRKGAVPSKMHELRISEMSLHS
Homology
BLAST of Csor.00g194080 vs. NCBI nr
Match:
KAG6607098.1 (hypothetical protein SDJN03_00440, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036787.1 hypothetical protein SDJN02_00407 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 336 bits (861), Expect = 5.20e-116
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0
Query: 1 MEIATEPTIPTTSTQSKPVDSEQQSETSGAGETTATPELETPINGTPDREKKGKGQDQME 60
MEIATEPTIPTTSTQSKPVDSEQQSETSGAGETTATPELETPINGTPDREKKGKGQDQME
Sbjct: 1 MEIATEPTIPTTSTQSKPVDSEQQSETSGAGETTATPELETPINGTPDREKKGKGQDQME 60
Query: 61 SSKCECKTPTPDEKTEEKQRILVPVNGLMMDRLKVPKSPNVAGEAKQRGGIALPKNGTPN 120
SSKCECKTPTPDEKTEEKQRILVPVNGLMMDRLKVPKSPNVAGEAKQRGGIALPKNGTPN
Sbjct: 61 SSKCECKTPTPDEKTEEKQRILVPVNGLMMDRLKVPKSPNVAGEAKQRGGIALPKNGTPN 120
Query: 121 RLKVPKAFKYHERYTSPTDLMMSPITKGLLARTRKGAVPSKMHELRISEMSLHS 174
RLKVPKAFKYHERYTSPTDLMMSPITKGLLARTRKGAVPSKMHELRISEMSLHS
Sbjct: 121 RLKVPKAFKYHERYTSPTDLMMSPITKGLLARTRKGAVPSKMHELRISEMSLHS 174
BLAST of Csor.00g194080 vs. NCBI nr
Match:
XP_022948389.1 (uncharacterized protein LOC111452080 [Cucurbita moschata])
HSP 1 Score: 330 bits (847), Expect = 7.10e-114
Identity = 172/174 (98.85%), Postives = 172/174 (98.85%), Query Frame = 0
Query: 1 MEIATEPTIPTTSTQSKPVDSEQQSETSGAGETTATPELETPINGTPDREKKGKGQDQME 60
MEIATEPTIPTT TQSKPVDSEQQSETSGAGETTAT ELETPINGTPDREKKGKGQDQME
Sbjct: 1 MEIATEPTIPTTPTQSKPVDSEQQSETSGAGETTATRELETPINGTPDREKKGKGQDQME 60
Query: 61 SSKCECKTPTPDEKTEEKQRILVPVNGLMMDRLKVPKSPNVAGEAKQRGGIALPKNGTPN 120
SSKCECKTPTPDEKTEEKQRILVPVNGLMMDRLKVPKSPNVAGEAKQRGGIALPKNGTPN
Sbjct: 61 SSKCECKTPTPDEKTEEKQRILVPVNGLMMDRLKVPKSPNVAGEAKQRGGIALPKNGTPN 120
Query: 121 RLKVPKAFKYHERYTSPTDLMMSPITKGLLARTRKGAVPSKMHELRISEMSLHS 174
RLKVPKAFKYHERYTSPTDLMMSPITKGLLARTRKGAVPSKMHELRISEMSLHS
Sbjct: 121 RLKVPKAFKYHERYTSPTDLMMSPITKGLLARTRKGAVPSKMHELRISEMSLHS 174
BLAST of Csor.00g194080 vs. NCBI nr
Match:
XP_023525350.1 (uncharacterized protein LOC111788976 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 325 bits (834), Expect = 6.81e-112
Identity = 168/174 (96.55%), Postives = 172/174 (98.85%), Query Frame = 0
Query: 1 MEIATEPTIPTTSTQSKPVDSEQQSETSGAGETTATPELETPINGTPDREKKGKGQDQME 60
MEIATEPTIPTT TQSKPVDSEQQSETSGAGETTATPELETPI+GTPDREKKGKG++Q E
Sbjct: 1 MEIATEPTIPTTPTQSKPVDSEQQSETSGAGETTATPELETPIDGTPDREKKGKGENQKE 60
Query: 61 SSKCECKTPTPDEKTEEKQRILVPVNGLMMDRLKVPKSPNVAGEAKQRGGIALPKNGTPN 120
SSKCECKTPTPDEKTEEKQRILVPVNGLMMDRLKVPKSPNVAGEAKQRGGIALP+NGTPN
Sbjct: 61 SSKCECKTPTPDEKTEEKQRILVPVNGLMMDRLKVPKSPNVAGEAKQRGGIALPRNGTPN 120
Query: 121 RLKVPKAFKYHERYTSPTDLMMSPITKGLLARTRKGAVPSKMHELRISEMSLHS 174
RLKVPKAFKYHERYTSPTDLMMSPITKGLLARTRKGAVPSKMHELRISEMSLHS
Sbjct: 121 RLKVPKAFKYHERYTSPTDLMMSPITKGLLARTRKGAVPSKMHELRISEMSLHS 174
BLAST of Csor.00g194080 vs. NCBI nr
Match:
XP_022998048.1 (uncharacterized protein LOC111492813 [Cucurbita maxima])
HSP 1 Score: 325 bits (832), Expect = 1.38e-111
Identity = 168/174 (96.55%), Postives = 169/174 (97.13%), Query Frame = 0
Query: 1 MEIATEPTIPTTSTQSKPVDSEQQSETSGAGETTATPELETPINGTPDREKKGKGQDQME 60
MEIATEP IPTT TQSKPVDSEQQSETSGAGETTATPELETPINGTPDREKKGK Q+QME
Sbjct: 1 MEIATEPAIPTTPTQSKPVDSEQQSETSGAGETTATPELETPINGTPDREKKGKAQNQME 60
Query: 61 SSKCECKTPTPDEKTEEKQRILVPVNGLMMDRLKVPKSPNVAGEAKQRGGIALPKNGTPN 120
SSKCECKTPTPDEKTEEKQRILVPVNGLMMDRLKVPKSPNVAGE KQRGGIA PKNGTPN
Sbjct: 61 SSKCECKTPTPDEKTEEKQRILVPVNGLMMDRLKVPKSPNVAGEVKQRGGIAFPKNGTPN 120
Query: 121 RLKVPKAFKYHERYTSPTDLMMSPITKGLLARTRKGAVPSKMHELRISEMSLHS 174
RLKVPKAFKYHERYTSPTDLMMSPITKGLLARTRKGAVPSKMHELRISEMSLHS
Sbjct: 121 RLKVPKAFKYHERYTSPTDLMMSPITKGLLARTRKGAVPSKMHELRISEMSLHS 174
BLAST of Csor.00g194080 vs. NCBI nr
Match:
XP_022155023.1 (uncharacterized protein LOC111022170 [Momordica charantia])
HSP 1 Score: 179 bits (453), Expect = 1.58e-53
Identity = 119/204 (58.33%), Postives = 133/204 (65.20%), Query Frame = 0
Query: 1 MEIATEPTIPTTSTQSKPVD-------SEQQSETSGAG---------------------- 60
MEI + +IP++ QS+ D S+QQ E SGAG
Sbjct: 1 MEIPIQASIPSSPNQSECTDFESKLTISDQQPEISGAGDGDGLLKHPESPAQIGKLTPAG 60
Query: 61 ETTATPELETPINGTPDREKKGKGQDQMESSKCECKTPTPDEKTE---EKQRILVPVNGL 120
ET ATPE ETP +++K + Q+Q E S E KT TP EK E EK+RILVP NG
Sbjct: 61 ETPATPEFETP------KKEKARSQNQSEKSNSEMKTATPVEKAEDETEKKRILVPKNG- 120
Query: 121 MMDRLKVPKSPNVAGEAKQRGGIALPKNGTPNRLKVPKAFKYHERYTSPTDLMMSPITKG 172
MDRLKVPKSPN AG+ K GI LPKNGTPNRLKVPKAFKY ERY SPTDLMMSPI+KG
Sbjct: 121 SMDRLKVPKSPNPAGKVKF-SGIELPKNGTPNRLKVPKAFKYPERYMSPTDLMMSPISKG 180
BLAST of Csor.00g194080 vs. ExPASy TrEMBL
Match:
A0A6J1G9R7 (uncharacterized protein LOC111452080 OS=Cucurbita moschata OX=3662 GN=LOC111452080 PE=4 SV=1)
HSP 1 Score: 330 bits (847), Expect = 3.44e-114
Identity = 172/174 (98.85%), Postives = 172/174 (98.85%), Query Frame = 0
Query: 1 MEIATEPTIPTTSTQSKPVDSEQQSETSGAGETTATPELETPINGTPDREKKGKGQDQME 60
MEIATEPTIPTT TQSKPVDSEQQSETSGAGETTAT ELETPINGTPDREKKGKGQDQME
Sbjct: 1 MEIATEPTIPTTPTQSKPVDSEQQSETSGAGETTATRELETPINGTPDREKKGKGQDQME 60
Query: 61 SSKCECKTPTPDEKTEEKQRILVPVNGLMMDRLKVPKSPNVAGEAKQRGGIALPKNGTPN 120
SSKCECKTPTPDEKTEEKQRILVPVNGLMMDRLKVPKSPNVAGEAKQRGGIALPKNGTPN
Sbjct: 61 SSKCECKTPTPDEKTEEKQRILVPVNGLMMDRLKVPKSPNVAGEAKQRGGIALPKNGTPN 120
Query: 121 RLKVPKAFKYHERYTSPTDLMMSPITKGLLARTRKGAVPSKMHELRISEMSLHS 174
RLKVPKAFKYHERYTSPTDLMMSPITKGLLARTRKGAVPSKMHELRISEMSLHS
Sbjct: 121 RLKVPKAFKYHERYTSPTDLMMSPITKGLLARTRKGAVPSKMHELRISEMSLHS 174
BLAST of Csor.00g194080 vs. ExPASy TrEMBL
Match:
A0A6J1KFQ1 (uncharacterized protein LOC111492813 OS=Cucurbita maxima OX=3661 GN=LOC111492813 PE=4 SV=1)
HSP 1 Score: 325 bits (832), Expect = 6.66e-112
Identity = 168/174 (96.55%), Postives = 169/174 (97.13%), Query Frame = 0
Query: 1 MEIATEPTIPTTSTQSKPVDSEQQSETSGAGETTATPELETPINGTPDREKKGKGQDQME 60
MEIATEP IPTT TQSKPVDSEQQSETSGAGETTATPELETPINGTPDREKKGK Q+QME
Sbjct: 1 MEIATEPAIPTTPTQSKPVDSEQQSETSGAGETTATPELETPINGTPDREKKGKAQNQME 60
Query: 61 SSKCECKTPTPDEKTEEKQRILVPVNGLMMDRLKVPKSPNVAGEAKQRGGIALPKNGTPN 120
SSKCECKTPTPDEKTEEKQRILVPVNGLMMDRLKVPKSPNVAGE KQRGGIA PKNGTPN
Sbjct: 61 SSKCECKTPTPDEKTEEKQRILVPVNGLMMDRLKVPKSPNVAGEVKQRGGIAFPKNGTPN 120
Query: 121 RLKVPKAFKYHERYTSPTDLMMSPITKGLLARTRKGAVPSKMHELRISEMSLHS 174
RLKVPKAFKYHERYTSPTDLMMSPITKGLLARTRKGAVPSKMHELRISEMSLHS
Sbjct: 121 RLKVPKAFKYHERYTSPTDLMMSPITKGLLARTRKGAVPSKMHELRISEMSLHS 174
BLAST of Csor.00g194080 vs. ExPASy TrEMBL
Match:
A0A6J1DLV5 (uncharacterized protein LOC111022170 OS=Momordica charantia OX=3673 GN=LOC111022170 PE=4 SV=1)
HSP 1 Score: 179 bits (453), Expect = 7.67e-54
Identity = 119/204 (58.33%), Postives = 133/204 (65.20%), Query Frame = 0
Query: 1 MEIATEPTIPTTSTQSKPVD-------SEQQSETSGAG---------------------- 60
MEI + +IP++ QS+ D S+QQ E SGAG
Sbjct: 1 MEIPIQASIPSSPNQSECTDFESKLTISDQQPEISGAGDGDGLLKHPESPAQIGKLTPAG 60
Query: 61 ETTATPELETPINGTPDREKKGKGQDQMESSKCECKTPTPDEKTE---EKQRILVPVNGL 120
ET ATPE ETP +++K + Q+Q E S E KT TP EK E EK+RILVP NG
Sbjct: 61 ETPATPEFETP------KKEKARSQNQSEKSNSEMKTATPVEKAEDETEKKRILVPKNG- 120
Query: 121 MMDRLKVPKSPNVAGEAKQRGGIALPKNGTPNRLKVPKAFKYHERYTSPTDLMMSPITKG 172
MDRLKVPKSPN AG+ K GI LPKNGTPNRLKVPKAFKY ERY SPTDLMMSPI+KG
Sbjct: 121 SMDRLKVPKSPNPAGKVKF-SGIELPKNGTPNRLKVPKAFKYPERYMSPTDLMMSPISKG 180
BLAST of Csor.00g194080 vs. ExPASy TrEMBL
Match:
A0A5A7UZK0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold692G00200 PE=4 SV=1)
HSP 1 Score: 156 bits (394), Expect = 4.58e-45
Identity = 89/117 (76.07%), Postives = 95/117 (81.20%), Query Frame = 0
Query: 65 ECKTPTPDEKTEEKQRILVPVNGLMMDRLKVPKSPNVAG-EAK---QR---GGIALPKNG 124
ECKTPTPDEKT++K+RILVP NG MDR KVPKSP E K QR GGI LPKNG
Sbjct: 72 ECKTPTPDEKTDKKERILVPKNG-SMDRSKVPKSPGKVNLECKTPTQRVKIGGIELPKNG 131
Query: 125 TPNRLKVPKAFKYHERYTSPTDLMMSPITKGLLARTRKGAVPSKMHELRISEMSLHS 174
TPNRLK+P AFKY ERY SPTDLM+SPI+KGLLARTRKGAVPSKMHELR SEMSL S
Sbjct: 132 TPNRLKLPIAFKYPERYKSPTDLMISPISKGLLARTRKGAVPSKMHELRNSEMSLLS 187
BLAST of Csor.00g194080 vs. ExPASy TrEMBL
Match:
A0A1S3CI15 (uncharacterized protein LOC103501189 OS=Cucumis melo OX=3656 GN=LOC103501189 PE=4 SV=1)
HSP 1 Score: 156 bits (394), Expect = 4.58e-45
Identity = 89/117 (76.07%), Postives = 95/117 (81.20%), Query Frame = 0
Query: 65 ECKTPTPDEKTEEKQRILVPVNGLMMDRLKVPKSPNVAG-EAK---QR---GGIALPKNG 124
ECKTPTPDEKT++K+RILVP NG MDR KVPKSP E K QR GGI LPKNG
Sbjct: 72 ECKTPTPDEKTDKKERILVPKNG-SMDRSKVPKSPGKVNLECKTPTQRVKIGGIELPKNG 131
Query: 125 TPNRLKVPKAFKYHERYTSPTDLMMSPITKGLLARTRKGAVPSKMHELRISEMSLHS 174
TPNRLK+P AFKY ERY SPTDLM+SPI+KGLLARTRKGAVPSKMHELR SEMSL S
Sbjct: 132 TPNRLKLPIAFKYPERYKSPTDLMISPISKGLLARTRKGAVPSKMHELRNSEMSLLS 187
BLAST of Csor.00g194080 vs. TAIR 10
Match:
AT3G02120.1 (hydroxyproline-rich glycoprotein family protein )
HSP 1 Score: 72.8 bits (177), Expect = 3.1e-13
Identity = 48/117 (41.03%), Postives = 61/117 (52.14%), Query Frame = 0
Query: 59 MESSKCECKTPTPDEKTEEKQRILVPVNGLMMDRLKVPKSPNVAGEAKQRGGIALP--KN 118
ME + +TP KT+ R + N P+S R P K
Sbjct: 1 MELQQSNLETPL---KTQHDHRKITTSNPESSPPRPFPESSRKHDSPPPRASTNEPMKKI 60
Query: 119 GTPNRLKVPKAFKYHERYTSPTDLMMSPITKGLLARTRKGA---VPSKMHELRISEM 171
GTP RL+VP AFKY ERY SPTD MMSP+TKGLLARTRK + +P ++ +I E+
Sbjct: 61 GTPERLRVPIAFKYPERYRSPTDAMMSPVTKGLLARTRKSSGSLIPPSFNQTKIQEL 114
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAG6607098.1 | 5.20e-116 | 100.00 | hypothetical protein SDJN03_00440, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022948389.1 | 7.10e-114 | 98.85 | uncharacterized protein LOC111452080 [Cucurbita moschata] | [more] |
XP_023525350.1 | 6.81e-112 | 96.55 | uncharacterized protein LOC111788976 [Cucurbita pepo subsp. pepo] | [more] |
XP_022998048.1 | 1.38e-111 | 96.55 | uncharacterized protein LOC111492813 [Cucurbita maxima] | [more] |
XP_022155023.1 | 1.58e-53 | 58.33 | uncharacterized protein LOC111022170 [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1G9R7 | 3.44e-114 | 98.85 | uncharacterized protein LOC111452080 OS=Cucurbita moschata OX=3662 GN=LOC1114520... | [more] |
A0A6J1KFQ1 | 6.66e-112 | 96.55 | uncharacterized protein LOC111492813 OS=Cucurbita maxima OX=3661 GN=LOC111492813... | [more] |
A0A6J1DLV5 | 7.67e-54 | 58.33 | uncharacterized protein LOC111022170 OS=Momordica charantia OX=3673 GN=LOC111022... | [more] |
A0A5A7UZK0 | 4.58e-45 | 76.07 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S3CI15 | 4.58e-45 | 76.07 | uncharacterized protein LOC103501189 OS=Cucumis melo OX=3656 GN=LOC103501189 PE=... | [more] |
Match Name | E-value | Identity | Description | |
AT3G02120.1 | 3.1e-13 | 41.03 | hydroxyproline-rich glycoprotein family protein | [more] |