Csor.00g193120 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCCCAATTCACTTTGTTCATTCCAATGGGTCGAAATTTTCGAGCGTCGAAGCATCTTCGGACTTTCCTTCCCAATCTTCGGTAATGGTGGCGTTCAAACAGTTCTTTTCTACGCCATTTTCACCTTTTTTGGGGTTTCCATTACTGGTTGAAATTGTTGACACAATATCATCAATCGAATAGCTACAATCTCGAGTTATAGGTATGTATTTTGAACTTGATTTCACTTTGGATTTGCTATAATTTTCTAGATTTCGTTGTTTGTACGAATCCTCATTTCGTCTTTTTACATCTGGATTTGATGATTTGATGATTTGATGATTTGATGATTTGATTGAGGATGCCATTGATGTTTCTTATGGATTTCTGTGCTTCTCTTGCGTACAGTGATCATAATAAGTAGAGAAATCGTACTACTATGTTTTTATCATCTTTGGAATTTGGAAACTCTAAGTAATATGATTGTTAGCTGCTGAGGGAGAGTGAATTGAATGTCCCATTTCTTTCACAAAAACAAGAGGAACACTTAAATTCTTATGAATATAGGTTTTCTTTTTAACAACAATCGTACTTGGAAGGAAATTCTAAAACTAAGAGGTGAATATCATTTTGGGAGATGACTTTGGTAAGGAAAACTTTATGTTGTTTGGAATTGGCGAGAAAGTTTACGGGTGTAACTCTTGATCATTGAACTGAACATGAACTTGTTGATGGCTCAGCGCTCTTGTAAAAGAAAAAAAAAAAAAATCTATTTCCAGTCATTTTGATGATGAAAACGAATAAGTATTTCTTGAAGTTGTTGTATTATCTGCTGATAACTTTAAAATTTGTTACTTCCACAGGCTGTTTTCTAAATTTTGTTTCACTGTTGCTGTTGTGCAGAAATGGTGGTAGATACTCATGCGCAGGTTGCAAAATTTTCTGTGGCCTTACCCTCGTCCTTGGTTACCCTTCCACATAGATCTTCAAATAGGTTGTCTTATCATCTCCCATTGGGTCTAAAAACAAAAGTAAAAAAGATAAGGTCCTCATCTGCTACTGATGCAGGACATAGTGTGCCTCCCTCATCTTCAGAAAGAAGGAATCCACTTGCCATTTTTCTTGATGTTCCTCGTACTGTATGGAGGCAAACATTGCGTCCATTGAGTAATTTTGGGTTCGGTCAAAGGAGCATATGGGAAGGTGGGGTTGGGTTGTTTCTAGTGTCAGGTGCTATACTTCTCACACTCAGTTTGGCTTGGTTGAGAGGCTTTCAACTGCGGTCTAAATTTAGAAAATACTTGGCTGTCTTTGAGTTTGCTCAGGCCTGTGGTATTTCTACTGGAACTCCTGTAAGAATTAGAGGGGTTACTGTTGGCAATGTCATTCGTATTAACCCTTCCTTGAGATGTATTGAAACTGTTGTTGAGGTATGCAAATTCATATCCTTTCTCTGCTTGATTAGAACATGAAAGTACTTTTCTATAAATTCTTGGGGAAGAATCGTTAATAATTGTTTCTTTTAGAAGCACTTTGAATATTTTTATCATTCTATCCTTGATTATCTAACCAAAGACTAAAAATACTTTTTGTATCTGAAATTACTTTTTATTCTTCAAAATCATCTCAAACTCATGTAAGTTCATCATTAGTTTGAGAACCAAAAGTTAAACTATATAGGTGTGGGATCTCACATCGGTTGGAGAGAGGAACAGAGTATTCCTTATAAGGGTATGGAAACCTCTCCCTAGCAGACACGTTTTAAAAACCTTGAGGGGAAGCCCGAAAGGGAAAGCTCAAAGAGGACAATATCTGCTAGCGGCTAGCGGTGGGCTTGGGCTATTACAAATGGTATCAGAGCCAGACATTGGGCGGTGTGCTAGCGAGGATGTCGGGCTCCCAAGAGGGATGGATTGTGAGATCCCACATCGGTGGGAGAGAGGAATGAAGTATTCCATATAAGGGTATGGAAACCTCTCCCTGGCATACATGTTTTAAAAACCTTGAGAGGAAACTCGAAAGGAAAAACCCAAAAGGGGACAATATCTGCTAGCGGTGGGCTTGGGCTGTTACAATAGGCTAGTTAACAAATAGGCTTACTCTTTGACTTACAAAGATTAAAAAAAGAAAGAAAAAAAAAAGAGAGAAGACATTGACTAAGATGCGTAAAAGGAAAGAAAATAAAAAAGAGAGACGTTTTAGTTTCCTTAATCAAAGCTTTTAACAAAGAGTTTGTACCATATGCCATTTAGTTCATATTATCTTCCTATAGAGTTCATCATAGTTATTTTCCATTGGCATGAATTCGTTTTCTTACCATTTTTTTTTCTATCACAAAATGAAATATACCACCCATTTTGCAGCTTGAAGATGATAAGATAATTGTACCACGTAATTCATTGGTTGAAGTAAACCAGTCTGGTCTTCTTATGGAGACAGTGATTGACATTACTCCTCGCAATCCTATTCCAGTGCCTTCAGCGGGACCACTTGACTCTGAATGTATCAAAGAAGGTTTAATATTATGCGATAAGCAGAAAATGAAGGGGCATCAAGGGGTAAGTTTGGATGAATTAGTTGGAATATTCACTCGGCTTGGGCGCGAAGCGGAGGAAATAGGGCTTTCCAATACATTTGCATTAGCTCAACGAGTTGCTTTGGTTATTGAAGAAGCAAAGCCTTTGCTTTTAAAGGTCCGACTCCTTACAATTTCATGCTCTAAACTTTATTTTCTAGCTTGGTTCCTAGGCAGTCATTCAAATTATGAATGTTCATATCTTGTAAATATTATAAGAAAATATTTTGTTGGCAACTCTGATGGGATGTTCACTGATTTCATGAAGAAGATGGAAGGCTTGTAAAAAAACAATAAATACTATGTATTCGTATGCCAGCACTTCCATGGAATCTGGTTACTTATTAAGGCTTCTAGATTTACCTAGTAGGTAGGATCTGGACTTTTGCTAAAAAAAACTTTTAAAGAGCAAATATGATTGGAACATTGATAGCTCAAACATAGGAGTTGCATTGCGGCTAGAAACTGGGAGTTTTCTTGGGTATTCCGGTATGAGCCTTCGAACGGAATCAGGAATTTATAGCTTTAATCCTTGAAAGTTGTAATTATTTGTGTTAAAATGTATTAGGTTCTTGTTTGATTGTCTATTTTGATGAGTGAGATATATAGTTCCACGTATCTAACTATCTTCCTATGAAAAATGTTTGTTTTGATGTAGTGATGTCTCAGATTCAAGCCATGGCTGAAGATGTTCAACCTTTGCTCGCTGAGCTTCGTGACAGTGGTCTTCTAAAGGAGGTTGAAAATTTAACTAAAAGTTTGTCACATGCCACAGAAGATTTAAGGTAAACTATTCCTGAAGTCTGAAATTGGAATTTTAATGTAGATAAGCTCTGATTTCTGAATTGCCACAAACTTTATAATGAAGCTTCCCCGTTGAGGAAATGAAAAGGGTCTATAATTTTCAATCCTTTGACAACTTTCACCAGAAATTAGTCGCTCTTTTCTTGATTCTTTTATGCATTTCTTCAAGAGAACAGCCTAAATAACATTTGTACAACAGATTTTGGCCTTTTCCTTGCACAAAAATCAGCTCAAACCCAAAACATACATGATGATTTTGAAAAAGAAAAAGAAGAATCAATCTTTGAATTCCTTTTACATGATGTATGCTTATTGAGACTTTTTCGATCGTTTACAGAAGCGTGCATGCGTCCATTATGACTCCCGAAAACACAGCACTGCTTCAGAAATCCATTTATACGCTAATTCTTACTCTGAAGAACATAGAGGTAAGATCCTAACTGGTCGAGTTCTTTCCGGTTTGCCCCAAGCAGTTACTTCTCATAATTACTTTCTTTACCGTTCTAACTCCTTGTTCCTCACTATTGCAGAGTTTGAGCTCAGAACTTCTTGGGTTCACTGGCGATGAGGCTACAAAACGGAATTTAAAAGTGCTGATCAAGTCTCTCAGCAGGCTGCTATGA ATGGGCCCAATTCACTTTGTTCATTCCAATGGGTCGAAATTTTCGAGCGTCGAAGCATCTTCGGACTTTCCTTCCCAATCTTCGCTACAATCTCGAGTTATAGGCTGTTTTCTAAATTTTGTTTCACTGTTGCTGTTGTGCAGAAATGGTGGTAGATACTCATGCGCAGGACATAGTGTGCCTCCCTCATCTTCAGAAAGAAGGAATCCACTTGCCATTTTTCTTGATGTTCCTCGTACTGTATGGAGGCAAACATTGCGTCCATTGAGTAATTTTGGGTTCGGTCAAAGGAGCATATGGGAAGGTGGGGTTGGGTTGTTTCTAGTGTCAGGTGCTATACTTCTCACACTCAGTTTGGCTTGGTTGAGAGGCTTTCAACTGCGGTCTAAATTTAGAAAATACTTGGCTGTCTTTGAGTTTGCTCAGGCCTGTGGTATTTCTACTGGAACTCCTGTAAGAATTAGAGGGGTTACTGTTGGCAATGTCATTCGTATTAACCCTTCCTTGAGATGTATTGAAACTGTTGTTGAGCTTGAAGATGATAAGATAATTGTACCACGTAATTCATTGGTTGAAGTAAACCAGTCTGGTCTTCTTATGGAGACAGTGATTGACATTACTCCTCGCAATCCTATTCCAGTGCCTTCAGCGGGACCACTTGACTCTGAATGTATCAAAGAAGGTTTAATATTATGCGATAAGCAGAAAATGAAGGGGCATCAAGGGGTAAGTTTGGATGAATTAGTTGGAATATTCACTCGGCTTGGGCGCGAAGCGGAGGAAATAGGGCTTTCCAATACATTTGCATTAGCTCAACGAGTTGCTTTGGTTATTGAAGAAGCAAAGCCTTTGCTTTTAAAGATTCAAGCCATGGCTGAAGATGTTCAACCTTTGCTCGCTGAGCTTCGTGACAGTGGTCTTCTAAAGGAGGTTGAAAATTTAACTAAAAGTTTGTCACATGCCACAGAAGATTTAAGAAGCGTGCATGCGTCCATTATGACTCCCGAAAACACAGCACTGCTTCAGAAATCCATTTATACGCTAATTCTTACTCTGAAGAACATAGAGAGTTTGAGCTCAGAACTTCTTGGGTTCACTGGCGATGAGGCTACAAAACGGAATTTAAAAGTGCTGATCAAGTCTCTCAGCAGGCTGCTATGA ATGGGCCCAATTCACTTTGTTCATTCCAATGGGTCGAAATTTTCGAGCGTCGAAGCATCTTCGGACTTTCCTTCCCAATCTTCGCTACAATCTCGAGTTATAGGCTGTTTTCTAAATTTTGTTTCACTGTTGCTGTTGTGCAGAAATGGTGGTAGATACTCATGCGCAGGACATAGTGTGCCTCCCTCATCTTCAGAAAGAAGGAATCCACTTGCCATTTTTCTTGATGTTCCTCGTACTGTATGGAGGCAAACATTGCGTCCATTGAGTAATTTTGGGTTCGGTCAAAGGAGCATATGGGAAGGTGGGGTTGGGTTGTTTCTAGTGTCAGGTGCTATACTTCTCACACTCAGTTTGGCTTGGTTGAGAGGCTTTCAACTGCGGTCTAAATTTAGAAAATACTTGGCTGTCTTTGAGTTTGCTCAGGCCTGTGGTATTTCTACTGGAACTCCTGTAAGAATTAGAGGGGTTACTGTTGGCAATGTCATTCGTATTAACCCTTCCTTGAGATGTATTGAAACTGTTGTTGAGCTTGAAGATGATAAGATAATTGTACCACGTAATTCATTGGTTGAAGTAAACCAGTCTGGTCTTCTTATGGAGACAGTGATTGACATTACTCCTCGCAATCCTATTCCAGTGCCTTCAGCGGGACCACTTGACTCTGAATGTATCAAAGAAGGTTTAATATTATGCGATAAGCAGAAAATGAAGGGGCATCAAGGGGTAAGTTTGGATGAATTAGTTGGAATATTCACTCGGCTTGGGCGCGAAGCGGAGGAAATAGGGCTTTCCAATACATTTGCATTAGCTCAACGAGTTGCTTTGGTTATTGAAGAAGCAAAGCCTTTGCTTTTAAAGATTCAAGCCATGGCTGAAGATGTTCAACCTTTGCTCGCTGAGCTTCGTGACAGTGGTCTTCTAAAGGAGGTTGAAAATTTAACTAAAAGTTTGTCACATGCCACAGAAGATTTAAGAAGCGTGCATGCGTCCATTATGACTCCCGAAAACACAGCACTGCTTCAGAAATCCATTTATACGCTAATTCTTACTCTGAAGAACATAGAGAGTTTGAGCTCAGAACTTCTTGGGTTCACTGGCGATGAGGCTACAAAACGGAATTTAAAAGTGCTGATCAAGTCTCTCAGCAGGCTGCTATGA MGPIHFVHSNGSKFSSVEASSDFPSQSSLQSRVIGCFLNFVSLLLLCRNGGRYSCAGHSVPPSSSERRNPLAIFLDVPRTVWRQTLRPLSNFGFGQRSIWEGGVGLFLVSGAILLTLSLAWLRGFQLRSKFRKYLAVFEFAQACGISTGTPVRIRGVTVGNVIRINPSLRCIETVVELEDDKIIVPRNSLVEVNQSGLLMETVIDITPRNPIPVPSAGPLDSECIKEGLILCDKQKMKGHQGVSLDELVGIFTRLGREAEEIGLSNTFALAQRVALVIEEAKPLLLKIQAMAEDVQPLLAELRDSGLLKEVENLTKSLSHATEDLRSVHASIMTPENTALLQKSIYTLILTLKNIESLSSELLGFTGDEATKRNLKVLIKSLSRLL Homology
BLAST of Csor.00g193120 vs. ExPASy Swiss-Prot
Match: Q9LTR2 (Protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TGD2 PE=1 SV=1) HSP 1 Score: 488.8 bits (1257), Expect = 5.6e-137 Identity = 245/325 (75.38%), Postives = 286/325 (88.00%), Query Frame = 0
BLAST of Csor.00g193120 vs. ExPASy Swiss-Prot
Match: Q1XDB5 (Uncharacterized protein ycf22 OS=Pyropia yezoensis OX=2788 GN=ycf22 PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 1.6e-19 Identity = 58/162 (35.80%), Postives = 89/162 (54.94%), Query Frame = 0
BLAST of Csor.00g193120 vs. ExPASy Swiss-Prot
Match: P51372 (Uncharacterized protein ycf22 OS=Porphyra purpurea OX=2787 GN=ycf22 PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 7.6e-17 Identity = 48/137 (35.04%), Postives = 76/137 (55.47%), Query Frame = 0
BLAST of Csor.00g193120 vs. ExPASy Swiss-Prot
Match: P46315 (Uncharacterized protein ycf22 OS=Antithamnion sp. OX=2767 GN=ycf22 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 8.7e-13 Identity = 43/147 (29.25%), Postives = 76/147 (51.70%), Query Frame = 0
BLAST of Csor.00g193120 vs. NCBI nr
Match: KAG6607193.1 (Protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 739 bits (1909), Expect = 1.16e-268 Identity = 386/386 (100.00%), Postives = 386/386 (100.00%), Query Frame = 0
BLAST of Csor.00g193120 vs. NCBI nr
Match: XP_022948293.1 (protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic-like [Cucurbita moschata] >XP_022948294.1 protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic-like [Cucurbita moschata] >KAG7036881.1 Protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 630 bits (1625), Expect = 1.99e-225 Identity = 331/331 (100.00%), Postives = 331/331 (100.00%), Query Frame = 0
BLAST of Csor.00g193120 vs. NCBI nr
Match: XP_023523118.1 (protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023523123.1 protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 627 bits (1618), Expect = 2.24e-224 Identity = 329/331 (99.40%), Postives = 330/331 (99.70%), Query Frame = 0
BLAST of Csor.00g193120 vs. NCBI nr
Match: XP_022998942.1 (protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic-like [Cucurbita maxima] >XP_022998943.1 protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 615 bits (1586), Expect = 1.73e-219 Identity = 324/331 (97.89%), Postives = 326/331 (98.49%), Query Frame = 0
BLAST of Csor.00g193120 vs. NCBI nr
Match: XP_023554510.1 (protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023554511.1 protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023554512.1 protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 599 bits (1545), Expect = 2.91e-213 Identity = 310/331 (93.66%), Postives = 324/331 (97.89%), Query Frame = 0
BLAST of Csor.00g193120 vs. ExPASy TrEMBL
Match: A0A6J1G9G9 (protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111452008 PE=4 SV=1) HSP 1 Score: 630 bits (1625), Expect = 9.65e-226 Identity = 331/331 (100.00%), Postives = 331/331 (100.00%), Query Frame = 0
BLAST of Csor.00g193120 vs. ExPASy TrEMBL
Match: A0A6J1K9F4 (protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111493450 PE=4 SV=1) HSP 1 Score: 615 bits (1586), Expect = 8.38e-220 Identity = 324/331 (97.89%), Postives = 326/331 (98.49%), Query Frame = 0
BLAST of Csor.00g193120 vs. ExPASy TrEMBL
Match: A0A6J1GJI3 (protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454927 PE=4 SV=1) HSP 1 Score: 595 bits (1534), Expect = 6.67e-212 Identity = 307/331 (92.75%), Postives = 322/331 (97.28%), Query Frame = 0
BLAST of Csor.00g193120 vs. ExPASy TrEMBL
Match: A0A6J1C2W9 (protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007966 PE=4 SV=1) HSP 1 Score: 595 bits (1533), Expect = 9.47e-212 Identity = 308/331 (93.05%), Postives = 322/331 (97.28%), Query Frame = 0
BLAST of Csor.00g193120 vs. ExPASy TrEMBL
Match: A0A6J1HZ36 (protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111468218 PE=4 SV=1) HSP 1 Score: 590 bits (1521), Expect = 6.35e-210 Identity = 304/331 (91.84%), Postives = 322/331 (97.28%), Query Frame = 0
BLAST of Csor.00g193120 vs. TAIR 10
Match: AT3G20320.1 (trigalactosyldiacylglycerol2 ) HSP 1 Score: 488.8 bits (1257), Expect = 4.0e-138 Identity = 245/325 (75.38%), Postives = 286/325 (88.00%), Query Frame = 0
BLAST of Csor.00g193120 vs. TAIR 10
Match: AT3G20320.2 (trigalactosyldiacylglycerol2 ) HSP 1 Score: 345.9 bits (886), Expect = 4.2e-95 Identity = 169/226 (74.78%), Postives = 194/226 (85.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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