Csor.00g193070 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g193070
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr01: 2880217 .. 2880680 (-)
RNA-Seq ExpressionCsor.00g193070
SyntenyCsor.00g193070
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCCCTAAATTTCCAATAATTGCAAAATGCCCCCTCTCTCATTCTAGAAGCCTTCATAAACAAGCTAATGTAAGGGCGAAATACCCAATTCGCCCTTTTTCCACCCCCCCTATTTAAGCTTCCTGATTCATTTCTAATTCAATATTCTCATAATTCCCCAGTTTCCATCTTTTCAGACCATCTCCAGCGCCGCCTCCTCCCACCGCTACTGCAACTTCTTACTCCTCTTAACTCTACTTCCATCAATGGATTCCAAAGCACCGAAGCGGCGATTCTCGGAGCTGCCGCCGAGACGAGGTCAGATCCTGATCGGGATCTTCAAAAGCATCTTCAGAACAGGTAAACCGATGCCGGAAGGATTCGAAAGTGATCGGAGAAAAAACGAATCCCTAACTTTGTCTCCGATCACTCCGGCTACGAATTCCAGTGGCTACAACTCGGAAGTTCAGTCCGAGTCATGA

mRNA sequence

ATGACCCCTAAATTTCCAATAATTGCAAAATGCCCCCTCTCTCATTCTAGAAGCCTTCATAAACAAGCTAATACCATCTCCAGCGCCGCCTCCTCCCACCGCTACTGCAACTTCTTACTCCTCTTAACTCTACTTCCATCAATGGATTCCAAAGCACCGAAGCGGCGATTCTCGGAGCTGCCGCCGAGACGAGGTCAGATCCTGATCGGGATCTTCAAAAGCATCTTCAGAACAGGTAAACCGATGCCGGAAGGATTCGAAAGTGATCGGAGAAAAAACGAATCCCTAACTTTGTCTCCGATCACTCCGGCTACGAATTCCAGTGGCTACAACTCGGAAGTTCAGTCCGAGTCATGA

Coding sequence (CDS)

ATGACCCCTAAATTTCCAATAATTGCAAAATGCCCCCTCTCTCATTCTAGAAGCCTTCATAAACAAGCTAATACCATCTCCAGCGCCGCCTCCTCCCACCGCTACTGCAACTTCTTACTCCTCTTAACTCTACTTCCATCAATGGATTCCAAAGCACCGAAGCGGCGATTCTCGGAGCTGCCGCCGAGACGAGGTCAGATCCTGATCGGGATCTTCAAAAGCATCTTCAGAACAGGTAAACCGATGCCGGAAGGATTCGAAAGTGATCGGAGAAAAAACGAATCCCTAACTTTGTCTCCGATCACTCCGGCTACGAATTCCAGTGGCTACAACTCGGAAGTTCAGTCCGAGTCATGA

Protein sequence

MTPKFPIIAKCPLSHSRSLHKQANTISSAASSHRYCNFLLLLTLLPSMDSKAPKRRFSELPPRRGQILIGIFKSIFRTGKPMPEGFESDRRKNESLTLSPITPATNSSGYNSEVQSES
Homology
BLAST of Csor.00g193070 vs. NCBI nr
Match: KAG6607199.1 (hypothetical protein SDJN03_00541, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 236 bits (602), Expect = 2.47e-78
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0

Query: 1   MTPKFPIIAKCPLSHSRSLHKQANTISSAASSHRYCNFLLLLTLLPSMDSKAPKRRFSEL 60
           MTPKFPIIAKCPLSHSRSLHKQANTISSAASSHRYCNFLLLLTLLPSMDSKAPKRRFSEL
Sbjct: 1   MTPKFPIIAKCPLSHSRSLHKQANTISSAASSHRYCNFLLLLTLLPSMDSKAPKRRFSEL 60

Query: 61  PPRRGQILIGIFKSIFRTGKPMPEGFESDRRKNESLTLSPITPATNSSGYNSEVQSES 118
           PPRRGQILIGIFKSIFRTGKPMPEGFESDRRKNESLTLSPITPATNSSGYNSEVQSES
Sbjct: 61  PPRRGQILIGIFKSIFRTGKPMPEGFESDRRKNESLTLSPITPATNSSGYNSEVQSES 118

BLAST of Csor.00g193070 vs. NCBI nr
Match: TYK08469.1 (hypothetical protein E5676_scaffold74032G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 84.0 bits (206), Expect = 1.30e-18
Identity = 41/70 (58.57%), Postives = 51/70 (72.86%), Query Frame = 0

Query: 49  DSKAPKRRFSELPPRRGQILIGIFKSIFRTGKPMPEGFESDRRKNESLTLSPITPATNSS 108
            +K P++R  E PPRRG I I IF+SIFRT K +PEGF   RR++E+LT +  TPA  +S
Sbjct: 3   SNKEPRKRMPEFPPRRGLIKIKIFRSIFRTVKSIPEGFARSRREDETLTSTSTTPAPGTS 62

Query: 109 GYNSEVQSES 118
           GYNSE QSES
Sbjct: 63  GYNSEAQSES 72

BLAST of Csor.00g193070 vs. NCBI nr
Match: KAE8652730.1 (hypothetical protein Csa_013247 [Cucumis sativus])

HSP 1 Score: 70.1 bits (170), Expect = 4.79e-13
Identity = 39/78 (50.00%), Postives = 49/78 (62.82%), Query Frame = 0

Query: 51  KAPKRRFSELPPRRGQILIGIFKSIFRTGKPMPEGFESDRRKNES----------LTLSP 110
           K P++R +E PPRRG I I IF+SIFRT K +PEGF   RR++E+           T + 
Sbjct: 5   KDPRKRQAEFPPRRGLIKIKIFRSIFRTVKSIPEGFARSRREDETPTSTSTSTSTSTSTS 64

Query: 111 ITPATNSSGYNSEVQSES 118
            TPA  +SGYNSE Q ES
Sbjct: 65  TTPAPGTSGYNSEAQPES 82

BLAST of Csor.00g193070 vs. NCBI nr
Match: KAB2614866.1 (hypothetical protein D8674_021454 [Pyrus ussuriensis x Pyrus communis])

HSP 1 Score: 49.3 bits (116), Expect = 6.20e-05
Identity = 32/74 (43.24%), Postives = 40/74 (54.05%), Query Frame = 0

Query: 45  LPSMDSKAPKRRFSELPPRRGQILIGIFKSIFRTGKPMPEGFESDRRKNES-LTLSPITP 104
           +P   SK  + R   LPPRRGQI I IF  +F+   PM  G     R+N   L+ S  TP
Sbjct: 9   IPGSKSKHSRNR--RLPPRRGQIKIKIFNELFKFLAPMAGGGARKPRENGGFLSSSSQTP 68

Query: 105 ATNSSGYNSEVQSE 117
           A   SGY S+ QS+
Sbjct: 69  AETPSGYCSDAQSD 80

BLAST of Csor.00g193070 vs. NCBI nr
Match: KDP44139.1 (hypothetical protein JCGZ_05606 [Jatropha curcas])

HSP 1 Score: 47.8 bits (112), Expect = 2.00e-04
Identity = 24/70 (34.29%), Postives = 40/70 (57.14%), Query Frame = 0

Query: 48  MDSKAPKRRFSELPPRRGQILIGIFKSIFRTGKPMPEGFESDRRKNESLTLSPITPATNS 107
           ++SK+ +R   ++PP+RGQI I I K+  R+   +    +  +   +    SP TPAT  
Sbjct: 4   IESKSTERHQQKIPPKRGQIKIKIVKNFIRSASGIASNGKMSKENGDFAISSPTTPAT-P 63

Query: 108 SGYNSEVQSE 117
           +GYNS+  +E
Sbjct: 64  TGYNSDAATE 72

BLAST of Csor.00g193070 vs. ExPASy TrEMBL
Match: A0A5D3CDP6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold74032G00010 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 6.31e-19
Identity = 41/70 (58.57%), Postives = 51/70 (72.86%), Query Frame = 0

Query: 49  DSKAPKRRFSELPPRRGQILIGIFKSIFRTGKPMPEGFESDRRKNESLTLSPITPATNSS 108
            +K P++R  E PPRRG I I IF+SIFRT K +PEGF   RR++E+LT +  TPA  +S
Sbjct: 3   SNKEPRKRMPEFPPRRGLIKIKIFRSIFRTVKSIPEGFARSRREDETLTSTSTTPAPGTS 62

Query: 109 GYNSEVQSES 118
           GYNSE QSES
Sbjct: 63  GYNSEAQSES 72

BLAST of Csor.00g193070 vs. ExPASy TrEMBL
Match: A0A0A0LV79 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G077190 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 2.46e-14
Identity = 39/72 (54.17%), Postives = 49/72 (68.06%), Query Frame = 0

Query: 51  KAPKRRFSELPPRRGQILIGIFKSIFRTGKPMPEGFESDRRKNES----LTLSPITPATN 110
           K P++R +E PPRRG I I IF+SIFRT K +PEGF   RR++E+     T +  TPA  
Sbjct: 5   KDPRKRQAEFPPRRGLIKIKIFRSIFRTVKSIPEGFARSRREDETPTSTSTSTSTTPAPG 64

Query: 111 SSGYNSEVQSES 118
           +SGYNSE Q ES
Sbjct: 65  TSGYNSEAQPES 76

BLAST of Csor.00g193070 vs. ExPASy TrEMBL
Match: A0A5N5GH67 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_021454 PE=4 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 3.00e-05
Identity = 32/74 (43.24%), Postives = 40/74 (54.05%), Query Frame = 0

Query: 45  LPSMDSKAPKRRFSELPPRRGQILIGIFKSIFRTGKPMPEGFESDRRKNES-LTLSPITP 104
           +P   SK  + R   LPPRRGQI I IF  +F+   PM  G     R+N   L+ S  TP
Sbjct: 9   IPGSKSKHSRNR--RLPPRRGQIKIKIFNELFKFLAPMAGGGARKPRENGGFLSSSSQTP 68

Query: 105 ATNSSGYNSEVQSE 117
           A   SGY S+ QS+
Sbjct: 69  AETPSGYCSDAQSD 80

BLAST of Csor.00g193070 vs. ExPASy TrEMBL
Match: A0A067LIR2 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_05606 PE=4 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 9.66e-05
Identity = 24/70 (34.29%), Postives = 40/70 (57.14%), Query Frame = 0

Query: 48  MDSKAPKRRFSELPPRRGQILIGIFKSIFRTGKPMPEGFESDRRKNESLTLSPITPATNS 107
           ++SK+ +R   ++PP+RGQI I I K+  R+   +    +  +   +    SP TPAT  
Sbjct: 4   IESKSTERHQQKIPPKRGQIKIKIVKNFIRSASGIASNGKMSKENGDFAISSPTTPAT-P 63

Query: 108 SGYNSEVQSE 117
           +GYNS+  +E
Sbjct: 64  TGYNSDAATE 72

BLAST of Csor.00g193070 vs. ExPASy TrEMBL
Match: A0A5C7IYI1 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_002523 PE=4 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 4.08e-04
Identity = 27/74 (36.49%), Postives = 40/74 (54.05%), Query Frame = 0

Query: 49  DSKAPK----RRFSELPPRRGQILIGIFKSIFRTGKPMPEGFESDRRKNESLTLSPITPA 108
           D+KAPK    ++   LPP+RGQ++I I K  F          ++ +R+   L+ S  TPA
Sbjct: 10  DNKAPKPTKKKQNQRLPPKRGQVMINILKGFFGAS-------DAAKRREGELSSSSTTPA 69

Query: 109 TNSSGYNSEVQSES 118
              S YNS+ + ES
Sbjct: 70  ATPSLYNSDAEFES 76

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6607199.12.47e-78100.00hypothetical protein SDJN03_00541, partial [Cucurbita argyrosperma subsp. sorori... [more]
TYK08469.11.30e-1858.57hypothetical protein E5676_scaffold74032G00010 [Cucumis melo var. makuwa][more]
KAE8652730.14.79e-1350.00hypothetical protein Csa_013247 [Cucumis sativus][more]
KAB2614866.16.20e-0543.24hypothetical protein D8674_021454 [Pyrus ussuriensis x Pyrus communis][more]
KDP44139.12.00e-0434.29hypothetical protein JCGZ_05606 [Jatropha curcas][more]
Match NameE-valueIdentityDescription
A0A5D3CDP66.31e-1958.57Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LV792.46e-1454.17Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G077190 PE=4 SV=1[more]
A0A5N5GH673.00e-0543.24Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D867... [more]
A0A067LIR29.66e-0534.29Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_05606 PE=4 SV=1[more]
A0A5C7IYI14.08e-0436.49Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_002523 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..118
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..118

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g193070.m01Csor.00g193070.m01mRNA